Multiple sequence alignment - TraesCS5D01G188700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G188700 chr5D 100.000 5283 0 0 1 5283 291254140 291248858 0.000000e+00 9756.0
1 TraesCS5D01G188700 chr5D 100.000 31 0 0 3849 3879 37329065 37329035 2.050000e-04 58.4
2 TraesCS5D01G188700 chr5B 93.216 3405 172 21 461 3823 331656484 331653097 0.000000e+00 4953.0
3 TraesCS5D01G188700 chr5B 90.156 1280 81 19 3886 5125 331653080 331651806 0.000000e+00 1624.0
4 TraesCS5D01G188700 chr5B 86.585 492 37 8 2 466 331657139 331656650 2.820000e-142 516.0
5 TraesCS5D01G188700 chr5A 95.942 2760 105 2 948 3706 383466963 383464210 0.000000e+00 4470.0
6 TraesCS5D01G188700 chr5A 90.216 1298 78 21 3887 5144 383464105 383462817 0.000000e+00 1648.0
7 TraesCS5D01G188700 chr5A 90.664 889 56 9 3 870 383467873 383466991 0.000000e+00 1157.0
8 TraesCS5D01G188700 chr6D 98.686 761 10 0 2188 2948 415402286 415403046 0.000000e+00 1351.0
9 TraesCS5D01G188700 chr6D 94.118 34 2 0 3846 3879 313271686 313271719 1.000000e-02 52.8
10 TraesCS5D01G188700 chr7B 86.250 80 11 0 3930 4009 713042670 713042749 2.620000e-13 87.9
11 TraesCS5D01G188700 chr7A 100.000 31 0 0 3849 3879 46209113 46209143 2.050000e-04 58.4
12 TraesCS5D01G188700 chr7A 94.286 35 2 0 3845 3879 464911527 464911493 3.000000e-03 54.7
13 TraesCS5D01G188700 chr4D 96.774 31 1 0 3849 3879 37898950 37898980 1.000000e-02 52.8
14 TraesCS5D01G188700 chr4D 100.000 28 0 0 3852 3879 174537013 174536986 1.000000e-02 52.8
15 TraesCS5D01G188700 chr4D 100.000 28 0 0 3852 3879 497058792 497058765 1.000000e-02 52.8
16 TraesCS5D01G188700 chr1D 100.000 28 0 0 3852 3879 339110979 339110952 1.000000e-02 52.8
17 TraesCS5D01G188700 chr1A 94.118 34 2 0 3846 3879 464858618 464858651 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G188700 chr5D 291248858 291254140 5282 True 9756.000000 9756 100.000000 1 5283 1 chr5D.!!$R2 5282
1 TraesCS5D01G188700 chr5B 331651806 331657139 5333 True 2364.333333 4953 89.985667 2 5125 3 chr5B.!!$R1 5123
2 TraesCS5D01G188700 chr5A 383462817 383467873 5056 True 2425.000000 4470 92.274000 3 5144 3 chr5A.!!$R1 5141
3 TraesCS5D01G188700 chr6D 415402286 415403046 760 False 1351.000000 1351 98.686000 2188 2948 1 chr6D.!!$F2 760

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
998 1239 0.719015 AAGATCCACTCTCCCTCCCA 59.281 55.0 0.00 0.0 31.03 4.37 F
2130 2376 0.673644 CGGAGTTCGGGAAGCATTGT 60.674 55.0 0.00 0.0 34.75 2.71 F
3075 3327 0.393077 AGTCAAGTTGGGACCTCACG 59.607 55.0 2.34 0.0 35.89 4.35 F
3856 4118 0.113580 TAAAACCTTGCACCCCCTCC 59.886 55.0 0.00 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2847 3099 0.244994 AGAAGCTCTGCTGGTACGTG 59.755 55.0 0.00 0.0 39.62 4.49 R
3201 3453 0.035881 CCCAGAGCTTCTTGACAGCA 59.964 55.0 0.00 0.0 39.99 4.41 R
3976 4248 0.459585 GAATGACCACGCCGAAGCTA 60.460 55.0 0.00 0.0 36.60 3.32 R
5127 5440 0.104304 GCCATCTGGTACACCGGTAG 59.896 60.0 6.87 0.0 43.01 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
92 104 9.381033 GCGTAGTAGATCTATTTGAGGAGTATA 57.619 37.037 5.57 0.00 0.00 1.47
107 119 7.224297 TGAGGAGTATATGGCTGGAAAATAAC 58.776 38.462 0.00 0.00 0.00 1.89
154 166 3.211045 TGTAGAACTCAACTTTGTGGCC 58.789 45.455 0.00 0.00 0.00 5.36
262 288 5.418524 AGTTGATGTACAATAGCATTTGGCA 59.581 36.000 0.00 0.00 42.28 4.92
337 363 5.174035 CCGATGATGTTACTCAATTCGAGAC 59.826 44.000 10.61 2.50 45.45 3.36
338 364 5.743872 CGATGATGTTACTCAATTCGAGACA 59.256 40.000 10.61 6.81 45.45 3.41
348 374 6.387465 ACTCAATTCGAGACAAATACGAGAA 58.613 36.000 10.61 0.00 45.45 2.87
441 473 3.724374 TGGCCATTGTAGCGTAGAATAC 58.276 45.455 0.00 0.00 38.50 1.89
501 707 4.171005 GTCATTTTGACATGTCCATGCAG 58.829 43.478 22.85 8.85 46.22 4.41
520 726 3.675775 GCAGCTCAACTTTTGTCAACCAA 60.676 43.478 0.00 0.00 0.00 3.67
527 733 7.581213 TCAACTTTTGTCAACCAATATGTCT 57.419 32.000 0.00 0.00 31.81 3.41
536 742 8.862325 TGTCAACCAATATGTCTGATAACTTT 57.138 30.769 0.00 0.00 0.00 2.66
635 845 1.733389 GCATTTGGCACCATCTGAACG 60.733 52.381 0.00 0.00 43.97 3.95
645 855 3.845775 CACCATCTGAACGCAATAAAACG 59.154 43.478 0.00 0.00 0.00 3.60
657 867 3.297979 GCAATAAAACGCAATGACTCACG 59.702 43.478 0.00 0.00 0.00 4.35
740 950 5.126396 GCATTTAAGATTGCCTCCCATAC 57.874 43.478 0.00 0.00 32.66 2.39
760 970 7.773224 CCCATACATGTTACTCAATTCCACTTA 59.227 37.037 2.30 0.00 0.00 2.24
766 976 6.950545 TGTTACTCAATTCCACTTAAACACG 58.049 36.000 0.00 0.00 0.00 4.49
776 986 6.303021 TCCACTTAAACACGACAAAATACC 57.697 37.500 0.00 0.00 0.00 2.73
799 1009 1.544314 GGCTCACAAGGAGTTCAAGCT 60.544 52.381 0.00 0.00 45.88 3.74
836 1046 2.564975 CTCCGACACGCGTTACCT 59.435 61.111 10.22 0.00 38.67 3.08
849 1059 4.143263 ACGCGTTACCTAATTTGAGAAACG 60.143 41.667 5.58 12.91 38.03 3.60
851 1061 5.272167 CGTTACCTAATTTGAGAAACGCA 57.728 39.130 7.80 0.00 32.64 5.24
888 1098 1.675641 ACCACATGCTTCGCCCTTC 60.676 57.895 0.00 0.00 0.00 3.46
993 1234 1.794714 TAGCCAAGATCCACTCTCCC 58.205 55.000 0.00 0.00 31.03 4.30
998 1239 0.719015 AAGATCCACTCTCCCTCCCA 59.281 55.000 0.00 0.00 31.03 4.37
1075 1321 1.564818 CTCCCTCCTTAAAACCCCTCC 59.435 57.143 0.00 0.00 0.00 4.30
1191 1437 2.572104 AGTTCTACACCCACTCCCAATC 59.428 50.000 0.00 0.00 0.00 2.67
1398 1644 2.358737 CCGGCCTCGTTTTGCTCT 60.359 61.111 0.00 0.00 33.95 4.09
1440 1686 0.900647 ACCTCTCCCAGAACGACCTG 60.901 60.000 0.00 0.00 0.00 4.00
1500 1746 0.832135 TCTTGAACCTCACCCTCGCT 60.832 55.000 0.00 0.00 0.00 4.93
1656 1902 1.521681 CCTGCTAGCCTACAACGCC 60.522 63.158 13.29 0.00 0.00 5.68
1760 2006 2.356069 GTGAAATCCCTTCTTCCATCGC 59.644 50.000 0.00 0.00 34.86 4.58
1832 2078 1.869767 CGAGATACCCAGAAGCATTGC 59.130 52.381 0.00 0.00 0.00 3.56
2025 2271 3.813166 ACATTTACCAGAACAACCTGACG 59.187 43.478 0.00 0.00 36.29 4.35
2130 2376 0.673644 CGGAGTTCGGGAAGCATTGT 60.674 55.000 0.00 0.00 34.75 2.71
2844 3096 1.071385 CCTCTGTTCTTCAGTGCCACT 59.929 52.381 0.00 0.00 43.97 4.00
2846 3098 0.590195 CTGTTCTTCAGTGCCACTGC 59.410 55.000 20.05 6.23 45.54 4.40
2847 3099 0.819259 TGTTCTTCAGTGCCACTGCC 60.819 55.000 20.05 5.79 45.54 4.85
2848 3100 0.819259 GTTCTTCAGTGCCACTGCCA 60.819 55.000 20.05 8.07 45.54 4.92
2849 3101 0.819259 TTCTTCAGTGCCACTGCCAC 60.819 55.000 20.05 0.00 45.54 5.01
3054 3306 2.960682 CGCTGAGATCAGTGCTGAG 58.039 57.895 10.23 0.00 45.86 3.35
3055 3307 0.455005 CGCTGAGATCAGTGCTGAGA 59.545 55.000 10.23 0.00 45.86 3.27
3075 3327 0.393077 AGTCAAGTTGGGACCTCACG 59.607 55.000 2.34 0.00 35.89 4.35
3135 3387 0.603569 ACAGCCTCGACGAGAACAAT 59.396 50.000 26.11 7.15 0.00 2.71
3177 3429 4.543689 CAGGGAGAGTATACAAGGTGGTA 58.456 47.826 5.50 0.00 0.00 3.25
3183 3435 5.586877 AGAGTATACAAGGTGGTAGTTGGA 58.413 41.667 5.50 0.00 0.00 3.53
3186 3438 0.769247 ACAAGGTGGTAGTTGGACCC 59.231 55.000 0.00 0.00 38.89 4.46
3201 3453 2.357836 CCCAGCAGTGAGGCCATT 59.642 61.111 5.01 0.00 0.00 3.16
3228 3480 1.451028 GAAGCTCTGGGCAAGCGAT 60.451 57.895 0.74 0.00 44.59 4.58
3442 3694 3.035363 TGGCCAACGAGGTATAAGATCA 58.965 45.455 0.61 0.00 40.61 2.92
3444 3696 3.181469 GGCCAACGAGGTATAAGATCACA 60.181 47.826 0.00 0.00 40.61 3.58
3493 3745 4.722700 ACCATGACTGCGTGCCCC 62.723 66.667 0.00 0.00 0.00 5.80
3540 3792 3.568538 GAACAACATTTTGCTCGATGCT 58.431 40.909 8.07 0.00 43.37 3.79
3717 3970 6.698008 AATGTTGCATGCTTTATACTGCTA 57.302 33.333 20.33 0.00 35.66 3.49
3719 3972 7.984422 ATGTTGCATGCTTTATACTGCTATA 57.016 32.000 20.33 0.00 35.66 1.31
3720 3973 7.984422 TGTTGCATGCTTTATACTGCTATAT 57.016 32.000 20.33 0.00 35.66 0.86
3721 3974 7.809665 TGTTGCATGCTTTATACTGCTATATG 58.190 34.615 20.33 0.00 35.66 1.78
3722 3975 7.661027 TGTTGCATGCTTTATACTGCTATATGA 59.339 33.333 20.33 0.00 35.66 2.15
3736 3989 6.260936 ACTGCTATATGATTGTACAAGGTTGC 59.739 38.462 14.65 11.35 0.00 4.17
3737 3990 6.356556 TGCTATATGATTGTACAAGGTTGCT 58.643 36.000 14.65 0.00 0.00 3.91
3771 4032 6.818142 ACTTCAGTTTTTCCCTTGTTCATTTG 59.182 34.615 0.00 0.00 0.00 2.32
3824 4086 0.751277 TGTTCTTGTGCACTGGTGGG 60.751 55.000 19.41 2.04 0.00 4.61
3825 4087 1.827789 TTCTTGTGCACTGGTGGGC 60.828 57.895 19.41 0.00 0.00 5.36
3826 4088 3.663176 CTTGTGCACTGGTGGGCG 61.663 66.667 19.41 0.00 0.00 6.13
3846 4108 1.000274 GGTGGCACTGCTAAAACCTTG 60.000 52.381 18.45 0.00 0.00 3.61
3847 4109 0.673437 TGGCACTGCTAAAACCTTGC 59.327 50.000 0.00 0.00 0.00 4.01
3848 4110 0.673437 GGCACTGCTAAAACCTTGCA 59.327 50.000 0.00 0.00 35.30 4.08
3849 4111 1.602920 GGCACTGCTAAAACCTTGCAC 60.603 52.381 0.00 0.00 32.91 4.57
3850 4112 1.602920 GCACTGCTAAAACCTTGCACC 60.603 52.381 0.00 0.00 32.91 5.01
3851 4113 1.000274 CACTGCTAAAACCTTGCACCC 60.000 52.381 0.00 0.00 32.91 4.61
3852 4114 0.603065 CTGCTAAAACCTTGCACCCC 59.397 55.000 0.00 0.00 32.91 4.95
3853 4115 0.830023 TGCTAAAACCTTGCACCCCC 60.830 55.000 0.00 0.00 0.00 5.40
3854 4116 0.541998 GCTAAAACCTTGCACCCCCT 60.542 55.000 0.00 0.00 0.00 4.79
3855 4117 1.545841 CTAAAACCTTGCACCCCCTC 58.454 55.000 0.00 0.00 0.00 4.30
3856 4118 0.113580 TAAAACCTTGCACCCCCTCC 59.886 55.000 0.00 0.00 0.00 4.30
3857 4119 2.994643 AAAACCTTGCACCCCCTCCG 62.995 60.000 0.00 0.00 0.00 4.63
3859 4121 4.410400 CCTTGCACCCCCTCCGTC 62.410 72.222 0.00 0.00 0.00 4.79
3860 4122 4.410400 CTTGCACCCCCTCCGTCC 62.410 72.222 0.00 0.00 0.00 4.79
3864 4126 2.041301 CACCCCCTCCGTCCCATA 60.041 66.667 0.00 0.00 0.00 2.74
3865 4127 1.691337 CACCCCCTCCGTCCCATAA 60.691 63.158 0.00 0.00 0.00 1.90
3866 4128 1.060163 CACCCCCTCCGTCCCATAAT 61.060 60.000 0.00 0.00 0.00 1.28
3867 4129 0.569204 ACCCCCTCCGTCCCATAATA 59.431 55.000 0.00 0.00 0.00 0.98
3868 4130 1.153565 ACCCCCTCCGTCCCATAATAT 59.846 52.381 0.00 0.00 0.00 1.28
3869 4131 2.387861 ACCCCCTCCGTCCCATAATATA 59.612 50.000 0.00 0.00 0.00 0.86
3870 4132 3.181392 ACCCCCTCCGTCCCATAATATAA 60.181 47.826 0.00 0.00 0.00 0.98
3871 4133 3.454812 CCCCCTCCGTCCCATAATATAAG 59.545 52.174 0.00 0.00 0.00 1.73
3872 4134 4.359105 CCCCTCCGTCCCATAATATAAGA 58.641 47.826 0.00 0.00 0.00 2.10
3873 4135 4.969359 CCCCTCCGTCCCATAATATAAGAT 59.031 45.833 0.00 0.00 0.00 2.40
3874 4136 5.070580 CCCCTCCGTCCCATAATATAAGATC 59.929 48.000 0.00 0.00 0.00 2.75
3875 4137 5.661312 CCCTCCGTCCCATAATATAAGATCA 59.339 44.000 0.00 0.00 0.00 2.92
3876 4138 6.327626 CCCTCCGTCCCATAATATAAGATCAT 59.672 42.308 0.00 0.00 0.00 2.45
3877 4139 7.147479 CCCTCCGTCCCATAATATAAGATCATT 60.147 40.741 0.00 0.00 0.00 2.57
3878 4140 8.267894 CCTCCGTCCCATAATATAAGATCATTT 58.732 37.037 0.00 0.00 0.00 2.32
3879 4141 9.319143 CTCCGTCCCATAATATAAGATCATTTC 57.681 37.037 0.00 0.00 0.00 2.17
3880 4142 7.979537 TCCGTCCCATAATATAAGATCATTTCG 59.020 37.037 0.00 0.00 0.00 3.46
3881 4143 7.979537 CCGTCCCATAATATAAGATCATTTCGA 59.020 37.037 0.00 0.00 0.00 3.71
3882 4144 9.025020 CGTCCCATAATATAAGATCATTTCGAG 57.975 37.037 0.00 0.00 0.00 4.04
3883 4145 9.877178 GTCCCATAATATAAGATCATTTCGAGT 57.123 33.333 0.00 0.00 0.00 4.18
3914 4184 5.147330 AGAAAGGATCGTGTGTGTGATTA 57.853 39.130 0.00 0.00 0.00 1.75
3955 4227 1.298953 ATGCCTACACCCTCCATGTT 58.701 50.000 0.00 0.00 0.00 2.71
3976 4248 0.377554 CCGAGAAGAGCGACGTGTAT 59.622 55.000 0.00 0.00 0.00 2.29
4017 4289 2.357034 GCTCGTCACCGGCAAGAA 60.357 61.111 0.00 0.00 32.67 2.52
4159 4431 1.202758 TGCAAGGTTCTGAACATCGGT 60.203 47.619 21.01 0.00 0.00 4.69
4233 4505 0.964358 AAGATGCTGCAGGAGGTTGC 60.964 55.000 17.12 0.00 44.33 4.17
4242 4514 3.787001 GGAGGTTGCGGGGGAGAG 61.787 72.222 0.00 0.00 0.00 3.20
4293 4565 1.280133 TGCTCTCTGAAGAACCATGGG 59.720 52.381 18.09 0.00 0.00 4.00
4320 4593 7.877097 TGGAATAATGCTAATTTTGTGCACTTT 59.123 29.630 19.41 8.98 39.63 2.66
4333 4606 3.253921 TGTGCACTTTCTTGGATCATGTG 59.746 43.478 19.41 0.00 0.00 3.21
4343 4616 6.000246 TCTTGGATCATGTGCTTATTACCA 58.000 37.500 0.00 0.00 0.00 3.25
4359 4632 9.209175 GCTTATTACCATTAACTAGGAGTCATG 57.791 37.037 0.00 0.00 0.00 3.07
4381 4654 2.094494 TCCGATCTTCAGAAGTGCACTC 60.094 50.000 21.95 13.62 0.00 3.51
4396 4669 1.605202 GCACTCCTGATAGCAGCTAGC 60.605 57.143 10.96 10.96 40.91 3.42
4401 4677 3.566351 TCCTGATAGCAGCTAGCAGTTA 58.434 45.455 34.80 24.29 45.54 2.24
4424 4702 9.291664 GTTAGCTCTGAACATTTAGTAGTACTG 57.708 37.037 13.29 0.00 0.00 2.74
4438 4716 9.754382 TTTAGTAGTACTGTGGTAAACTCAAAG 57.246 33.333 13.29 0.00 32.34 2.77
4478 4762 6.334989 TCTGAATGAATGAATGAAATGTGCC 58.665 36.000 0.00 0.00 0.00 5.01
4499 4783 3.163630 GTTGCTGTCAACCAATTGTGT 57.836 42.857 4.43 0.00 45.15 3.72
4500 4784 3.520569 GTTGCTGTCAACCAATTGTGTT 58.479 40.909 4.43 5.66 45.15 3.32
4501 4785 3.162202 TGCTGTCAACCAATTGTGTTG 57.838 42.857 23.17 23.17 43.46 3.33
4502 4786 2.495270 TGCTGTCAACCAATTGTGTTGT 59.505 40.909 25.70 8.79 42.82 3.32
4503 4787 3.056250 TGCTGTCAACCAATTGTGTTGTT 60.056 39.130 25.70 13.17 42.82 2.83
4509 4813 5.580297 GTCAACCAATTGTGTTGTTGAATGT 59.420 36.000 25.70 5.18 42.82 2.71
4529 4833 3.123050 GTTTGATGCTTTTGTGGTGACC 58.877 45.455 0.00 0.00 0.00 4.02
4550 4854 3.181476 CCAGCTGTAACTTTTGTTGCCTT 60.181 43.478 13.81 0.00 43.04 4.35
4592 4898 5.348451 GTGCACTTTGTTCTTTTTCACACAT 59.652 36.000 10.32 0.00 0.00 3.21
4617 4924 0.790207 TCGACGTGAAGATGCTTTGC 59.210 50.000 0.00 0.00 0.00 3.68
4619 4926 1.463034 CGACGTGAAGATGCTTTGCAG 60.463 52.381 0.00 0.00 43.65 4.41
4645 4952 4.103785 ACTTATGGAGATGCTACCATGCTT 59.896 41.667 0.00 0.00 45.08 3.91
4661 4968 3.370840 TGCTTAGTGGGCTGAATGAAT 57.629 42.857 0.00 0.00 0.00 2.57
4759 5066 2.427506 AGTGCTTAGTGCTTTAGTGGC 58.572 47.619 0.00 0.00 43.37 5.01
4813 5121 6.909909 ACTGTTGTTCTCGTTTCTTCTTTTT 58.090 32.000 0.00 0.00 0.00 1.94
4860 5169 4.326826 TGGTAAAGCAAACTCTGATCAGG 58.673 43.478 22.42 15.01 0.00 3.86
4867 5176 2.235650 CAAACTCTGATCAGGCTCCAGA 59.764 50.000 22.42 9.52 35.81 3.86
4945 5256 0.627986 CTCTTTGGCCTCCCCTTGAT 59.372 55.000 3.32 0.00 0.00 2.57
4948 5259 2.242196 TCTTTGGCCTCCCCTTGATTAG 59.758 50.000 3.32 0.00 0.00 1.73
5105 5417 2.808543 CTGTCTTAGTTTCACAGTGGCC 59.191 50.000 0.00 0.00 34.08 5.36
5110 5422 4.227300 TCTTAGTTTCACAGTGGCCCATAT 59.773 41.667 0.00 0.00 0.00 1.78
5111 5423 3.004752 AGTTTCACAGTGGCCCATATC 57.995 47.619 0.00 0.00 0.00 1.63
5125 5438 2.039084 CCCATATCTGTCCTTGGTAGGC 59.961 54.545 0.00 0.00 41.69 3.93
5126 5439 2.705658 CCATATCTGTCCTTGGTAGGCA 59.294 50.000 0.00 0.00 41.69 4.75
5127 5440 3.495100 CCATATCTGTCCTTGGTAGGCAC 60.495 52.174 0.00 0.00 41.69 5.01
5128 5441 1.958288 ATCTGTCCTTGGTAGGCACT 58.042 50.000 0.00 0.00 41.69 4.40
5140 5453 0.039472 TAGGCACTACCGGTGTACCA 59.961 55.000 19.93 6.02 46.86 3.25
5141 5454 1.217244 GGCACTACCGGTGTACCAG 59.783 63.158 19.93 8.81 46.86 4.00
5142 5455 1.252904 GGCACTACCGGTGTACCAGA 61.253 60.000 19.93 0.00 46.86 3.86
5143 5456 0.822164 GCACTACCGGTGTACCAGAT 59.178 55.000 19.93 0.00 46.86 2.90
5144 5457 1.470979 GCACTACCGGTGTACCAGATG 60.471 57.143 19.93 8.24 46.86 2.90
5145 5458 1.136305 CACTACCGGTGTACCAGATGG 59.864 57.143 19.93 0.00 40.79 3.51
5146 5459 0.104304 CTACCGGTGTACCAGATGGC 59.896 60.000 19.93 0.00 39.32 4.40
5147 5460 1.669049 TACCGGTGTACCAGATGGCG 61.669 60.000 19.93 0.00 39.32 5.69
5148 5461 2.577059 CGGTGTACCAGATGGCGT 59.423 61.111 0.00 0.00 39.32 5.68
5149 5462 1.809619 CGGTGTACCAGATGGCGTG 60.810 63.158 0.00 0.00 39.32 5.34
5150 5463 1.295423 GGTGTACCAGATGGCGTGT 59.705 57.895 0.00 0.00 39.32 4.49
5151 5464 1.019278 GGTGTACCAGATGGCGTGTG 61.019 60.000 0.00 0.00 39.32 3.82
5152 5465 0.320421 GTGTACCAGATGGCGTGTGT 60.320 55.000 2.96 0.00 39.32 3.72
5153 5466 0.394938 TGTACCAGATGGCGTGTGTT 59.605 50.000 2.96 0.00 39.32 3.32
5154 5467 1.202710 TGTACCAGATGGCGTGTGTTT 60.203 47.619 2.96 0.00 39.32 2.83
5155 5468 1.196808 GTACCAGATGGCGTGTGTTTG 59.803 52.381 2.96 0.00 39.32 2.93
5156 5469 0.179032 ACCAGATGGCGTGTGTTTGA 60.179 50.000 2.96 0.00 39.32 2.69
5157 5470 1.167851 CCAGATGGCGTGTGTTTGAT 58.832 50.000 2.96 0.00 0.00 2.57
5158 5471 1.131126 CCAGATGGCGTGTGTTTGATC 59.869 52.381 2.96 0.00 0.00 2.92
5159 5472 1.805943 CAGATGGCGTGTGTTTGATCA 59.194 47.619 0.00 0.00 0.00 2.92
5160 5473 2.226200 CAGATGGCGTGTGTTTGATCAA 59.774 45.455 3.38 3.38 0.00 2.57
5161 5474 3.084039 AGATGGCGTGTGTTTGATCAAT 58.916 40.909 9.40 0.00 0.00 2.57
5162 5475 2.702898 TGGCGTGTGTTTGATCAATG 57.297 45.000 9.40 0.00 0.00 2.82
5163 5476 1.952990 TGGCGTGTGTTTGATCAATGT 59.047 42.857 9.40 0.00 0.00 2.71
5164 5477 2.360483 TGGCGTGTGTTTGATCAATGTT 59.640 40.909 9.40 0.00 0.00 2.71
5165 5478 3.181482 TGGCGTGTGTTTGATCAATGTTT 60.181 39.130 9.40 0.00 0.00 2.83
5166 5479 4.036852 TGGCGTGTGTTTGATCAATGTTTA 59.963 37.500 9.40 0.00 0.00 2.01
5167 5480 4.616802 GGCGTGTGTTTGATCAATGTTTAG 59.383 41.667 9.40 1.89 0.00 1.85
5168 5481 4.088496 GCGTGTGTTTGATCAATGTTTAGC 59.912 41.667 9.40 8.13 0.00 3.09
5169 5482 4.616802 CGTGTGTTTGATCAATGTTTAGCC 59.383 41.667 9.40 0.00 0.00 3.93
5170 5483 4.923281 GTGTGTTTGATCAATGTTTAGCCC 59.077 41.667 9.40 0.00 0.00 5.19
5171 5484 4.832266 TGTGTTTGATCAATGTTTAGCCCT 59.168 37.500 9.40 0.00 0.00 5.19
5172 5485 5.304101 TGTGTTTGATCAATGTTTAGCCCTT 59.696 36.000 9.40 0.00 0.00 3.95
5173 5486 6.183360 TGTGTTTGATCAATGTTTAGCCCTTT 60.183 34.615 9.40 0.00 0.00 3.11
5174 5487 6.366061 GTGTTTGATCAATGTTTAGCCCTTTC 59.634 38.462 9.40 0.00 0.00 2.62
5175 5488 5.659440 TTGATCAATGTTTAGCCCTTTCC 57.341 39.130 3.38 0.00 0.00 3.13
5176 5489 3.694072 TGATCAATGTTTAGCCCTTTCCG 59.306 43.478 0.00 0.00 0.00 4.30
5177 5490 3.149005 TCAATGTTTAGCCCTTTCCGT 57.851 42.857 0.00 0.00 0.00 4.69
5178 5491 3.078837 TCAATGTTTAGCCCTTTCCGTC 58.921 45.455 0.00 0.00 0.00 4.79
5179 5492 3.081804 CAATGTTTAGCCCTTTCCGTCT 58.918 45.455 0.00 0.00 0.00 4.18
5180 5493 2.943036 TGTTTAGCCCTTTCCGTCTT 57.057 45.000 0.00 0.00 0.00 3.01
5181 5494 2.500229 TGTTTAGCCCTTTCCGTCTTG 58.500 47.619 0.00 0.00 0.00 3.02
5182 5495 2.158726 TGTTTAGCCCTTTCCGTCTTGT 60.159 45.455 0.00 0.00 0.00 3.16
5183 5496 2.178912 TTAGCCCTTTCCGTCTTGTG 57.821 50.000 0.00 0.00 0.00 3.33
5184 5497 1.053424 TAGCCCTTTCCGTCTTGTGT 58.947 50.000 0.00 0.00 0.00 3.72
5185 5498 0.182775 AGCCCTTTCCGTCTTGTGTT 59.817 50.000 0.00 0.00 0.00 3.32
5186 5499 0.310854 GCCCTTTCCGTCTTGTGTTG 59.689 55.000 0.00 0.00 0.00 3.33
5187 5500 0.310854 CCCTTTCCGTCTTGTGTTGC 59.689 55.000 0.00 0.00 0.00 4.17
5188 5501 1.308998 CCTTTCCGTCTTGTGTTGCT 58.691 50.000 0.00 0.00 0.00 3.91
5189 5502 1.264288 CCTTTCCGTCTTGTGTTGCTC 59.736 52.381 0.00 0.00 0.00 4.26
5190 5503 2.213499 CTTTCCGTCTTGTGTTGCTCT 58.787 47.619 0.00 0.00 0.00 4.09
5191 5504 1.865865 TTCCGTCTTGTGTTGCTCTC 58.134 50.000 0.00 0.00 0.00 3.20
5192 5505 1.040646 TCCGTCTTGTGTTGCTCTCT 58.959 50.000 0.00 0.00 0.00 3.10
5193 5506 1.000163 TCCGTCTTGTGTTGCTCTCTC 60.000 52.381 0.00 0.00 0.00 3.20
5194 5507 1.000283 CCGTCTTGTGTTGCTCTCTCT 60.000 52.381 0.00 0.00 0.00 3.10
5195 5508 2.057316 CGTCTTGTGTTGCTCTCTCTG 58.943 52.381 0.00 0.00 0.00 3.35
5196 5509 2.544694 CGTCTTGTGTTGCTCTCTCTGT 60.545 50.000 0.00 0.00 0.00 3.41
5197 5510 3.462021 GTCTTGTGTTGCTCTCTCTGTT 58.538 45.455 0.00 0.00 0.00 3.16
5198 5511 3.873952 GTCTTGTGTTGCTCTCTCTGTTT 59.126 43.478 0.00 0.00 0.00 2.83
5199 5512 4.333926 GTCTTGTGTTGCTCTCTCTGTTTT 59.666 41.667 0.00 0.00 0.00 2.43
5200 5513 4.572389 TCTTGTGTTGCTCTCTCTGTTTTC 59.428 41.667 0.00 0.00 0.00 2.29
5201 5514 4.142609 TGTGTTGCTCTCTCTGTTTTCT 57.857 40.909 0.00 0.00 0.00 2.52
5202 5515 3.873361 TGTGTTGCTCTCTCTGTTTTCTG 59.127 43.478 0.00 0.00 0.00 3.02
5203 5516 2.874701 TGTTGCTCTCTCTGTTTTCTGC 59.125 45.455 0.00 0.00 0.00 4.26
5204 5517 2.874701 GTTGCTCTCTCTGTTTTCTGCA 59.125 45.455 0.00 0.00 0.00 4.41
5205 5518 2.487934 TGCTCTCTCTGTTTTCTGCAC 58.512 47.619 0.00 0.00 0.00 4.57
5206 5519 1.458827 GCTCTCTCTGTTTTCTGCACG 59.541 52.381 0.00 0.00 0.00 5.34
5207 5520 2.064762 CTCTCTCTGTTTTCTGCACGG 58.935 52.381 0.00 0.00 0.00 4.94
5208 5521 0.514691 CTCTCTGTTTTCTGCACGGC 59.485 55.000 0.00 0.00 0.00 5.68
5209 5522 0.884704 TCTCTGTTTTCTGCACGGCC 60.885 55.000 0.00 0.00 0.00 6.13
5210 5523 1.856265 CTCTGTTTTCTGCACGGCCC 61.856 60.000 0.00 0.00 0.00 5.80
5211 5524 2.124109 TGTTTTCTGCACGGCCCA 60.124 55.556 0.00 0.00 0.00 5.36
5212 5525 2.133742 CTGTTTTCTGCACGGCCCAG 62.134 60.000 0.00 0.00 0.00 4.45
5213 5526 2.193536 GTTTTCTGCACGGCCCAGT 61.194 57.895 0.00 0.00 0.00 4.00
5214 5527 1.896660 TTTTCTGCACGGCCCAGTC 60.897 57.895 0.00 0.00 0.00 3.51
5215 5528 2.337879 TTTTCTGCACGGCCCAGTCT 62.338 55.000 0.00 0.00 0.00 3.24
5216 5529 2.337879 TTTCTGCACGGCCCAGTCTT 62.338 55.000 0.00 0.00 0.00 3.01
5217 5530 2.281761 CTGCACGGCCCAGTCTTT 60.282 61.111 0.00 0.00 0.00 2.52
5218 5531 2.281484 TGCACGGCCCAGTCTTTC 60.281 61.111 0.00 0.00 0.00 2.62
5219 5532 3.056328 GCACGGCCCAGTCTTTCC 61.056 66.667 0.00 0.00 0.00 3.13
5220 5533 2.429930 CACGGCCCAGTCTTTCCA 59.570 61.111 0.00 0.00 0.00 3.53
5221 5534 1.228124 CACGGCCCAGTCTTTCCAA 60.228 57.895 0.00 0.00 0.00 3.53
5222 5535 1.228154 ACGGCCCAGTCTTTCCAAC 60.228 57.895 0.00 0.00 0.00 3.77
5223 5536 1.971695 CGGCCCAGTCTTTCCAACC 60.972 63.158 0.00 0.00 0.00 3.77
5224 5537 1.152830 GGCCCAGTCTTTCCAACCA 59.847 57.895 0.00 0.00 0.00 3.67
5225 5538 1.179174 GGCCCAGTCTTTCCAACCAC 61.179 60.000 0.00 0.00 0.00 4.16
5226 5539 1.515521 GCCCAGTCTTTCCAACCACG 61.516 60.000 0.00 0.00 0.00 4.94
5227 5540 0.889186 CCCAGTCTTTCCAACCACGG 60.889 60.000 0.00 0.00 0.00 4.94
5228 5541 0.107831 CCAGTCTTTCCAACCACGGA 59.892 55.000 0.00 0.00 0.00 4.69
5229 5542 1.512926 CAGTCTTTCCAACCACGGAG 58.487 55.000 0.00 0.00 36.12 4.63
5242 5555 3.725754 ACGGAGTGGATGTGCTTTT 57.274 47.368 0.00 0.00 42.51 2.27
5243 5556 1.981256 ACGGAGTGGATGTGCTTTTT 58.019 45.000 0.00 0.00 42.51 1.94
5244 5557 3.134574 ACGGAGTGGATGTGCTTTTTA 57.865 42.857 0.00 0.00 42.51 1.52
5245 5558 2.812011 ACGGAGTGGATGTGCTTTTTAC 59.188 45.455 0.00 0.00 42.51 2.01
5246 5559 2.161609 CGGAGTGGATGTGCTTTTTACC 59.838 50.000 0.00 0.00 0.00 2.85
5247 5560 2.492088 GGAGTGGATGTGCTTTTTACCC 59.508 50.000 0.00 0.00 0.00 3.69
5248 5561 2.159382 AGTGGATGTGCTTTTTACCCG 58.841 47.619 0.00 0.00 0.00 5.28
5249 5562 1.883926 GTGGATGTGCTTTTTACCCGT 59.116 47.619 0.00 0.00 0.00 5.28
5250 5563 2.295070 GTGGATGTGCTTTTTACCCGTT 59.705 45.455 0.00 0.00 0.00 4.44
5251 5564 2.554893 TGGATGTGCTTTTTACCCGTTC 59.445 45.455 0.00 0.00 0.00 3.95
5252 5565 2.554893 GGATGTGCTTTTTACCCGTTCA 59.445 45.455 0.00 0.00 0.00 3.18
5253 5566 3.365969 GGATGTGCTTTTTACCCGTTCAG 60.366 47.826 0.00 0.00 0.00 3.02
5254 5567 1.950909 TGTGCTTTTTACCCGTTCAGG 59.049 47.619 0.00 0.00 40.63 3.86
5255 5568 1.951602 GTGCTTTTTACCCGTTCAGGT 59.048 47.619 0.00 0.00 44.37 4.00
5256 5569 2.031420 GTGCTTTTTACCCGTTCAGGTC 60.031 50.000 0.00 0.00 41.58 3.85
5257 5570 2.223745 GCTTTTTACCCGTTCAGGTCA 58.776 47.619 0.00 0.00 41.58 4.02
5258 5571 2.619646 GCTTTTTACCCGTTCAGGTCAA 59.380 45.455 0.00 0.00 41.58 3.18
5259 5572 3.304458 GCTTTTTACCCGTTCAGGTCAAG 60.304 47.826 0.00 0.00 41.58 3.02
5260 5573 3.842007 TTTTACCCGTTCAGGTCAAGA 57.158 42.857 0.00 0.00 41.58 3.02
5261 5574 3.396260 TTTACCCGTTCAGGTCAAGAG 57.604 47.619 0.00 0.00 41.58 2.85
5262 5575 0.606604 TACCCGTTCAGGTCAAGAGC 59.393 55.000 0.00 0.00 41.58 4.09
5263 5576 1.122019 ACCCGTTCAGGTCAAGAGCT 61.122 55.000 0.00 0.00 33.81 4.09
5264 5577 0.895530 CCCGTTCAGGTCAAGAGCTA 59.104 55.000 0.95 0.00 37.39 3.32
5265 5578 1.482593 CCCGTTCAGGTCAAGAGCTAT 59.517 52.381 0.95 0.00 37.39 2.97
5266 5579 2.693591 CCCGTTCAGGTCAAGAGCTATA 59.306 50.000 0.95 0.00 37.39 1.31
5267 5580 3.322254 CCCGTTCAGGTCAAGAGCTATAT 59.678 47.826 0.95 0.00 37.39 0.86
5268 5581 4.202264 CCCGTTCAGGTCAAGAGCTATATT 60.202 45.833 0.95 0.00 37.39 1.28
5269 5582 4.747108 CCGTTCAGGTCAAGAGCTATATTG 59.253 45.833 0.95 0.00 37.39 1.90
5270 5583 4.210120 CGTTCAGGTCAAGAGCTATATTGC 59.790 45.833 0.95 0.41 37.39 3.56
5271 5584 5.118990 GTTCAGGTCAAGAGCTATATTGCA 58.881 41.667 11.72 0.00 37.39 4.08
5272 5585 4.697514 TCAGGTCAAGAGCTATATTGCAC 58.302 43.478 11.72 5.24 37.39 4.57
5273 5586 3.492383 CAGGTCAAGAGCTATATTGCACG 59.508 47.826 11.72 0.00 37.39 5.34
5274 5587 3.384789 AGGTCAAGAGCTATATTGCACGA 59.615 43.478 11.72 0.00 37.39 4.35
5275 5588 3.738282 GGTCAAGAGCTATATTGCACGAG 59.262 47.826 11.72 3.97 34.99 4.18
5276 5589 4.363999 GTCAAGAGCTATATTGCACGAGT 58.636 43.478 11.72 0.00 34.99 4.18
5277 5590 4.208047 GTCAAGAGCTATATTGCACGAGTG 59.792 45.833 11.72 0.00 34.99 3.51
5278 5591 4.115516 CAAGAGCTATATTGCACGAGTGT 58.884 43.478 11.72 0.00 34.99 3.55
5279 5592 5.067283 TCAAGAGCTATATTGCACGAGTGTA 59.933 40.000 11.72 0.00 34.99 2.90
5280 5593 4.861210 AGAGCTATATTGCACGAGTGTAC 58.139 43.478 11.72 0.00 34.99 2.90
5281 5594 4.580995 AGAGCTATATTGCACGAGTGTACT 59.419 41.667 11.72 0.00 34.99 2.73
5282 5595 4.861210 AGCTATATTGCACGAGTGTACTC 58.139 43.478 11.72 1.92 36.16 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
92 104 5.422145 GCATTCAAGTTATTTTCCAGCCAT 58.578 37.500 0.00 0.00 0.00 4.40
262 288 2.519377 TCTTGTTGTGTTCGGATCGT 57.481 45.000 0.00 0.00 0.00 3.73
268 294 4.377431 GGTCAGCTTATCTTGTTGTGTTCG 60.377 45.833 0.00 0.00 0.00 3.95
298 324 0.952497 ATCGGATGCGATCATGCCAC 60.952 55.000 17.07 0.00 37.71 5.01
309 335 9.395431 CTCGAATTGAGTAACATCATCGGATGC 62.395 44.444 13.15 0.00 45.53 3.91
413 439 3.076621 ACGCTACAATGGCCATCATATG 58.923 45.455 21.08 16.20 34.44 1.78
501 707 6.215845 ACATATTGGTTGACAAAAGTTGAGC 58.784 36.000 0.00 0.00 43.46 4.26
520 726 9.965902 AAGAACCAAGAAAGTTATCAGACATAT 57.034 29.630 0.00 0.00 0.00 1.78
536 742 8.784043 GCTTTGAGTATCTTTAAAGAACCAAGA 58.216 33.333 21.26 5.03 38.77 3.02
555 764 1.002033 GCCATATGCTTCGGCTTTGAG 60.002 52.381 0.00 0.00 42.78 3.02
635 845 3.297979 CGTGAGTCATTGCGTTTTATTGC 59.702 43.478 0.00 0.00 0.00 3.56
740 950 7.533900 CGTGTTTAAGTGGAATTGAGTAACATG 59.466 37.037 0.00 0.00 0.00 3.21
760 970 3.634910 AGCCAAGGTATTTTGTCGTGTTT 59.365 39.130 0.00 0.00 0.00 2.83
766 976 4.798574 CTTGTGAGCCAAGGTATTTTGTC 58.201 43.478 0.00 0.00 45.70 3.18
776 986 5.153145 GCTTGAACTCCTTGTGAGCCAAG 62.153 52.174 14.99 14.99 46.75 3.61
799 1009 1.621072 GGGGGTTCATGCCATTGGTTA 60.621 52.381 4.26 0.00 0.00 2.85
836 1046 6.636447 CACTTTGACATGCGTTTCTCAAATTA 59.364 34.615 7.20 0.00 33.34 1.40
849 1059 2.287728 TGTCATGCACACTTTGACATGC 60.288 45.455 14.51 0.00 43.44 4.06
888 1098 4.117372 GAGTCGAACGTTGCCGCG 62.117 66.667 5.00 2.58 37.70 6.46
892 1102 3.110178 CCCCGAGTCGAACGTTGC 61.110 66.667 15.64 0.00 0.00 4.17
897 1107 4.493747 CGAGCCCCCGAGTCGAAC 62.494 72.222 15.64 0.00 35.70 3.95
906 1116 3.942439 GTATGGAGCCGAGCCCCC 61.942 72.222 0.00 0.00 0.00 5.40
921 1159 1.001248 CGGAGGGGAGGAGTTGGTA 59.999 63.158 0.00 0.00 0.00 3.25
993 1234 6.471233 TGTAGTAGTGAGATCATTTGGGAG 57.529 41.667 0.00 0.00 0.00 4.30
998 1239 5.235186 GCGCATTGTAGTAGTGAGATCATTT 59.765 40.000 0.30 0.00 0.00 2.32
1075 1321 4.394712 GAGTGGGGAGTGTGGGCG 62.395 72.222 0.00 0.00 0.00 6.13
1398 1644 1.228245 GTGCTGCAGGGACCTCAAA 60.228 57.895 17.12 0.00 0.00 2.69
1540 1786 3.818787 GAGCGACCGGAAGCCGTA 61.819 66.667 9.46 0.00 46.80 4.02
1676 1922 4.516195 GGTCGCCGAGCTTCTCCC 62.516 72.222 9.38 0.00 0.00 4.30
1760 2006 1.067142 TGACGAGATTCCCGAGGTTTG 60.067 52.381 0.00 0.00 0.00 2.93
1832 2078 3.664107 TGGACCAGAGAACTCAAATTCG 58.336 45.455 4.64 0.00 33.57 3.34
2058 2304 0.744874 TCCTTAGATCGGCAAGACGG 59.255 55.000 0.00 0.00 0.00 4.79
2844 3096 2.656646 CTCTGCTGGTACGTGGCA 59.343 61.111 0.00 2.68 34.66 4.92
2845 3097 2.788191 AAGCTCTGCTGGTACGTGGC 62.788 60.000 0.00 0.00 39.62 5.01
2846 3098 0.737715 GAAGCTCTGCTGGTACGTGG 60.738 60.000 0.00 0.00 39.62 4.94
2847 3099 0.244994 AGAAGCTCTGCTGGTACGTG 59.755 55.000 0.00 0.00 39.62 4.49
2848 3100 0.969894 AAGAAGCTCTGCTGGTACGT 59.030 50.000 0.00 0.00 39.62 3.57
2849 3101 1.354040 CAAGAAGCTCTGCTGGTACG 58.646 55.000 0.00 0.00 39.62 3.67
3042 3294 3.924144 ACTTGACTTCTCAGCACTGATC 58.076 45.455 0.00 0.00 39.13 2.92
3054 3306 2.495084 GTGAGGTCCCAACTTGACTTC 58.505 52.381 0.00 0.00 38.80 3.01
3055 3307 1.202651 CGTGAGGTCCCAACTTGACTT 60.203 52.381 0.00 0.00 33.22 3.01
3135 3387 2.359850 GCACCCTTGCCGATCACA 60.360 61.111 0.00 0.00 43.66 3.58
3161 3413 5.394993 GGTCCAACTACCACCTTGTATACTC 60.395 48.000 4.17 0.00 39.50 2.59
3162 3414 4.468868 GGTCCAACTACCACCTTGTATACT 59.531 45.833 4.17 0.00 39.50 2.12
3177 3429 1.757306 CTCACTGCTGGGTCCAACT 59.243 57.895 0.00 0.00 0.00 3.16
3183 3435 2.541907 AATGGCCTCACTGCTGGGT 61.542 57.895 3.32 0.00 0.00 4.51
3186 3438 2.882876 GCAATGGCCTCACTGCTG 59.117 61.111 3.32 0.00 42.22 4.41
3201 3453 0.035881 CCCAGAGCTTCTTGACAGCA 59.964 55.000 0.00 0.00 39.99 4.41
3228 3480 3.069586 TCCTCTTCTTCTTGCTTTCGACA 59.930 43.478 0.00 0.00 0.00 4.35
3280 3532 1.610038 CTTGTGCCTGACATTGCTCAA 59.390 47.619 11.65 11.65 38.28 3.02
3351 3603 0.654160 TCGGCATGTACTCGTAGACG 59.346 55.000 0.00 0.00 41.45 4.18
3540 3792 1.525077 AACCTTTGCGCCGAACTCA 60.525 52.632 4.18 0.00 0.00 3.41
3582 3834 2.492773 GGCCGGCCCATTCTCAATG 61.493 63.158 36.64 0.00 38.63 2.82
3717 3970 7.362920 GGAAACAGCAACCTTGTACAATCATAT 60.363 37.037 9.13 0.00 0.00 1.78
3719 3972 5.278957 GGAAACAGCAACCTTGTACAATCAT 60.279 40.000 9.13 0.00 0.00 2.45
3720 3973 4.037446 GGAAACAGCAACCTTGTACAATCA 59.963 41.667 9.13 0.00 0.00 2.57
3721 3974 4.278419 AGGAAACAGCAACCTTGTACAATC 59.722 41.667 9.13 0.00 0.00 2.67
3722 3975 4.215109 AGGAAACAGCAACCTTGTACAAT 58.785 39.130 9.13 0.00 0.00 2.71
3728 3981 4.338118 TGAAGTTAGGAAACAGCAACCTTG 59.662 41.667 0.00 0.00 38.12 3.61
3732 3985 5.500645 AACTGAAGTTAGGAAACAGCAAC 57.499 39.130 0.00 0.00 38.12 4.17
3736 3989 6.321435 AGGGAAAAACTGAAGTTAGGAAACAG 59.679 38.462 0.00 0.00 37.25 3.16
3737 3990 6.192044 AGGGAAAAACTGAAGTTAGGAAACA 58.808 36.000 0.00 0.00 37.25 2.83
3771 4032 8.484799 CACATAATTATGCAGAAAATGTCATGC 58.515 33.333 22.66 0.00 37.19 4.06
3824 4086 1.081442 GTTTTAGCAGTGCCACCGC 60.081 57.895 12.58 0.00 0.00 5.68
3825 4087 0.889186 AGGTTTTAGCAGTGCCACCG 60.889 55.000 12.58 0.00 0.00 4.94
3826 4088 1.000274 CAAGGTTTTAGCAGTGCCACC 60.000 52.381 12.58 12.93 0.00 4.61
3827 4089 1.602920 GCAAGGTTTTAGCAGTGCCAC 60.603 52.381 12.58 3.61 0.00 5.01
3828 4090 0.673437 GCAAGGTTTTAGCAGTGCCA 59.327 50.000 12.58 0.00 0.00 4.92
3829 4091 0.673437 TGCAAGGTTTTAGCAGTGCC 59.327 50.000 12.58 0.00 33.75 5.01
3830 4092 1.602920 GGTGCAAGGTTTTAGCAGTGC 60.603 52.381 7.13 7.13 39.21 4.40
3847 4109 1.060163 ATTATGGGACGGAGGGGGTG 61.060 60.000 0.00 0.00 0.00 4.61
3848 4110 0.569204 TATTATGGGACGGAGGGGGT 59.431 55.000 0.00 0.00 0.00 4.95
3849 4111 1.966845 ATATTATGGGACGGAGGGGG 58.033 55.000 0.00 0.00 0.00 5.40
3850 4112 4.359105 TCTTATATTATGGGACGGAGGGG 58.641 47.826 0.00 0.00 0.00 4.79
3851 4113 5.661312 TGATCTTATATTATGGGACGGAGGG 59.339 44.000 0.00 0.00 0.00 4.30
3852 4114 6.791867 TGATCTTATATTATGGGACGGAGG 57.208 41.667 0.00 0.00 0.00 4.30
3853 4115 9.319143 GAAATGATCTTATATTATGGGACGGAG 57.681 37.037 0.00 0.00 0.00 4.63
3854 4116 7.979537 CGAAATGATCTTATATTATGGGACGGA 59.020 37.037 0.00 0.00 0.00 4.69
3855 4117 7.979537 TCGAAATGATCTTATATTATGGGACGG 59.020 37.037 0.00 0.00 0.00 4.79
3856 4118 8.926715 TCGAAATGATCTTATATTATGGGACG 57.073 34.615 0.00 0.00 0.00 4.79
3857 4119 9.877178 ACTCGAAATGATCTTATATTATGGGAC 57.123 33.333 0.00 0.00 0.00 4.46
3876 4138 9.512435 CGATCCTTTCTAAAATACTACTCGAAA 57.488 33.333 0.00 0.00 0.00 3.46
3877 4139 8.680903 ACGATCCTTTCTAAAATACTACTCGAA 58.319 33.333 0.00 0.00 0.00 3.71
3878 4140 8.127327 CACGATCCTTTCTAAAATACTACTCGA 58.873 37.037 0.00 0.00 0.00 4.04
3879 4141 7.914346 ACACGATCCTTTCTAAAATACTACTCG 59.086 37.037 0.00 0.00 0.00 4.18
3880 4142 9.021863 CACACGATCCTTTCTAAAATACTACTC 57.978 37.037 0.00 0.00 0.00 2.59
3881 4143 8.529476 ACACACGATCCTTTCTAAAATACTACT 58.471 33.333 0.00 0.00 0.00 2.57
3882 4144 8.592998 CACACACGATCCTTTCTAAAATACTAC 58.407 37.037 0.00 0.00 0.00 2.73
3883 4145 8.308931 ACACACACGATCCTTTCTAAAATACTA 58.691 33.333 0.00 0.00 0.00 1.82
3884 4146 7.117812 CACACACACGATCCTTTCTAAAATACT 59.882 37.037 0.00 0.00 0.00 2.12
3914 4184 2.895404 ACTCTGCAATGCACAAAGGAAT 59.105 40.909 2.72 0.00 33.79 3.01
3955 4227 0.952497 ACACGTCGCTCTTCTCGGTA 60.952 55.000 0.00 0.00 0.00 4.02
3976 4248 0.459585 GAATGACCACGCCGAAGCTA 60.460 55.000 0.00 0.00 36.60 3.32
4159 4431 1.887242 GGTGTTGACGCACAGCAGA 60.887 57.895 7.17 0.00 43.39 4.26
4237 4509 2.821810 GCCTTCGGCTTGCTCTCC 60.822 66.667 0.00 0.00 46.69 3.71
4255 4527 3.181282 GGGGCCACCTCCTTCTTT 58.819 61.111 4.39 0.00 36.80 2.52
4293 4565 6.813152 AGTGCACAAAATTAGCATTATTCCAC 59.187 34.615 21.04 0.00 40.78 4.02
4320 4593 6.000246 TGGTAATAAGCACATGATCCAAGA 58.000 37.500 0.00 0.00 0.00 3.02
4333 4606 9.209175 CATGACTCCTAGTTAATGGTAATAAGC 57.791 37.037 0.00 0.00 0.00 3.09
4343 4616 6.071984 AGATCGGACATGACTCCTAGTTAAT 58.928 40.000 0.00 0.00 0.00 1.40
4359 4632 1.996191 GTGCACTTCTGAAGATCGGAC 59.004 52.381 23.36 16.68 30.17 4.79
4381 4654 2.906691 AACTGCTAGCTGCTATCAGG 57.093 50.000 32.02 19.84 43.37 3.86
4396 4669 9.291664 GTACTACTAAATGTTCAGAGCTAACTG 57.708 37.037 0.00 0.00 39.02 3.16
4401 4677 7.316640 CACAGTACTACTAAATGTTCAGAGCT 58.683 38.462 0.00 0.00 0.00 4.09
4417 4693 5.511888 GGCCTTTGAGTTTACCACAGTACTA 60.512 44.000 0.00 0.00 0.00 1.82
4424 4702 1.886542 CCAGGCCTTTGAGTTTACCAC 59.113 52.381 0.00 0.00 0.00 4.16
4438 4716 1.303970 AGAGCAAAGCTTCCAGGCC 60.304 57.895 0.00 0.00 39.88 5.19
4495 4779 5.008619 AGCATCAAACATTCAACAACACA 57.991 34.783 0.00 0.00 0.00 3.72
4496 4780 5.971895 AAGCATCAAACATTCAACAACAC 57.028 34.783 0.00 0.00 0.00 3.32
4497 4781 6.370994 ACAAAAGCATCAAACATTCAACAACA 59.629 30.769 0.00 0.00 0.00 3.33
4498 4782 6.683708 CACAAAAGCATCAAACATTCAACAAC 59.316 34.615 0.00 0.00 0.00 3.32
4499 4783 6.183360 CCACAAAAGCATCAAACATTCAACAA 60.183 34.615 0.00 0.00 0.00 2.83
4500 4784 5.293814 CCACAAAAGCATCAAACATTCAACA 59.706 36.000 0.00 0.00 0.00 3.33
4501 4785 5.294060 ACCACAAAAGCATCAAACATTCAAC 59.706 36.000 0.00 0.00 0.00 3.18
4502 4786 5.293814 CACCACAAAAGCATCAAACATTCAA 59.706 36.000 0.00 0.00 0.00 2.69
4503 4787 4.809958 CACCACAAAAGCATCAAACATTCA 59.190 37.500 0.00 0.00 0.00 2.57
4509 4813 2.762887 TGGTCACCACAAAAGCATCAAA 59.237 40.909 0.00 0.00 0.00 2.69
4529 4833 3.715628 AGGCAACAAAAGTTACAGCTG 57.284 42.857 13.48 13.48 41.41 4.24
4592 4898 2.066262 GCATCTTCACGTCGAAAAGGA 58.934 47.619 0.00 0.00 31.71 3.36
4619 4926 3.808728 TGGTAGCATCTCCATAAGTTGC 58.191 45.455 0.00 0.87 46.68 4.17
4645 4952 3.519107 TGAGTGATTCATTCAGCCCACTA 59.481 43.478 7.69 0.00 35.32 2.74
4661 4968 4.532126 ACTCCTGTTATGGTTCATGAGTGA 59.468 41.667 0.00 0.00 37.84 3.41
4685 4992 6.684362 GCTTTAGATGGGACTTCTAGACTTCC 60.684 46.154 9.56 9.56 0.00 3.46
4759 5066 3.641648 ACACCGAAAAATGCAATCACTG 58.358 40.909 0.00 0.00 0.00 3.66
4771 5078 1.210967 AGTCAACAGGGACACCGAAAA 59.789 47.619 0.00 0.00 43.47 2.29
4772 5079 0.834612 AGTCAACAGGGACACCGAAA 59.165 50.000 0.00 0.00 43.47 3.46
4813 5121 3.702045 ACAATCAAAAGGAAAACCGACCA 59.298 39.130 0.00 0.00 0.00 4.02
4867 5176 1.866015 TACTACAGCAGTCATGGGCT 58.134 50.000 0.00 0.00 42.06 5.19
4868 5177 2.280628 GTTACTACAGCAGTCATGGGC 58.719 52.381 0.00 0.00 38.80 5.36
4875 5184 5.147330 TGCTATGTTGTTACTACAGCAGT 57.853 39.130 9.02 0.00 46.52 4.40
4945 5256 4.651778 CAGGTGAAACTTGTGATCCCTAA 58.348 43.478 0.00 0.00 39.36 2.69
4948 5259 1.541588 GCAGGTGAAACTTGTGATCCC 59.458 52.381 0.00 0.00 46.90 3.85
5125 5438 4.674080 GCCATCTGGTACACCGGTAGTG 62.674 59.091 6.87 0.00 44.43 2.74
5126 5439 1.481871 CCATCTGGTACACCGGTAGT 58.518 55.000 6.87 10.99 43.01 2.73
5127 5440 0.104304 GCCATCTGGTACACCGGTAG 59.896 60.000 6.87 0.00 43.01 3.18
5128 5441 1.669049 CGCCATCTGGTACACCGGTA 61.669 60.000 6.87 0.00 43.01 4.02
5140 5453 2.183478 TGATCAAACACACGCCATCT 57.817 45.000 0.00 0.00 0.00 2.90
5141 5454 2.987413 TTGATCAAACACACGCCATC 57.013 45.000 5.45 0.00 0.00 3.51
5142 5455 2.557924 ACATTGATCAAACACACGCCAT 59.442 40.909 13.09 0.00 0.00 4.40
5143 5456 1.952990 ACATTGATCAAACACACGCCA 59.047 42.857 13.09 0.00 0.00 5.69
5144 5457 2.704725 ACATTGATCAAACACACGCC 57.295 45.000 13.09 0.00 0.00 5.68
5145 5458 4.088496 GCTAAACATTGATCAAACACACGC 59.912 41.667 13.09 8.11 0.00 5.34
5146 5459 4.616802 GGCTAAACATTGATCAAACACACG 59.383 41.667 13.09 1.83 0.00 4.49
5147 5460 4.923281 GGGCTAAACATTGATCAAACACAC 59.077 41.667 13.09 0.00 0.00 3.82
5148 5461 4.832266 AGGGCTAAACATTGATCAAACACA 59.168 37.500 13.09 0.00 0.00 3.72
5149 5462 5.391312 AGGGCTAAACATTGATCAAACAC 57.609 39.130 13.09 0.00 0.00 3.32
5150 5463 6.418057 AAAGGGCTAAACATTGATCAAACA 57.582 33.333 13.09 0.00 0.00 2.83
5151 5464 5.869344 GGAAAGGGCTAAACATTGATCAAAC 59.131 40.000 13.09 0.00 0.00 2.93
5152 5465 5.336372 CGGAAAGGGCTAAACATTGATCAAA 60.336 40.000 13.09 0.00 0.00 2.69
5153 5466 4.157656 CGGAAAGGGCTAAACATTGATCAA 59.842 41.667 11.26 11.26 0.00 2.57
5154 5467 3.694072 CGGAAAGGGCTAAACATTGATCA 59.306 43.478 0.00 0.00 0.00 2.92
5155 5468 3.694566 ACGGAAAGGGCTAAACATTGATC 59.305 43.478 0.00 0.00 0.00 2.92
5156 5469 3.694566 GACGGAAAGGGCTAAACATTGAT 59.305 43.478 0.00 0.00 0.00 2.57
5157 5470 3.078837 GACGGAAAGGGCTAAACATTGA 58.921 45.455 0.00 0.00 0.00 2.57
5158 5471 3.081804 AGACGGAAAGGGCTAAACATTG 58.918 45.455 0.00 0.00 0.00 2.82
5159 5472 3.434940 AGACGGAAAGGGCTAAACATT 57.565 42.857 0.00 0.00 0.00 2.71
5160 5473 3.081804 CAAGACGGAAAGGGCTAAACAT 58.918 45.455 0.00 0.00 0.00 2.71
5161 5474 2.158726 ACAAGACGGAAAGGGCTAAACA 60.159 45.455 0.00 0.00 0.00 2.83
5162 5475 2.225727 CACAAGACGGAAAGGGCTAAAC 59.774 50.000 0.00 0.00 0.00 2.01
5163 5476 2.158726 ACACAAGACGGAAAGGGCTAAA 60.159 45.455 0.00 0.00 0.00 1.85
5164 5477 1.418637 ACACAAGACGGAAAGGGCTAA 59.581 47.619 0.00 0.00 0.00 3.09
5165 5478 1.053424 ACACAAGACGGAAAGGGCTA 58.947 50.000 0.00 0.00 0.00 3.93
5166 5479 0.182775 AACACAAGACGGAAAGGGCT 59.817 50.000 0.00 0.00 0.00 5.19
5167 5480 0.310854 CAACACAAGACGGAAAGGGC 59.689 55.000 0.00 0.00 0.00 5.19
5168 5481 0.310854 GCAACACAAGACGGAAAGGG 59.689 55.000 0.00 0.00 0.00 3.95
5169 5482 1.264288 GAGCAACACAAGACGGAAAGG 59.736 52.381 0.00 0.00 0.00 3.11
5170 5483 2.213499 AGAGCAACACAAGACGGAAAG 58.787 47.619 0.00 0.00 0.00 2.62
5171 5484 2.158957 AGAGAGCAACACAAGACGGAAA 60.159 45.455 0.00 0.00 0.00 3.13
5172 5485 1.412710 AGAGAGCAACACAAGACGGAA 59.587 47.619 0.00 0.00 0.00 4.30
5173 5486 1.000163 GAGAGAGCAACACAAGACGGA 60.000 52.381 0.00 0.00 0.00 4.69
5174 5487 1.000283 AGAGAGAGCAACACAAGACGG 60.000 52.381 0.00 0.00 0.00 4.79
5175 5488 2.057316 CAGAGAGAGCAACACAAGACG 58.943 52.381 0.00 0.00 0.00 4.18
5176 5489 3.104843 ACAGAGAGAGCAACACAAGAC 57.895 47.619 0.00 0.00 0.00 3.01
5177 5490 3.827008 AACAGAGAGAGCAACACAAGA 57.173 42.857 0.00 0.00 0.00 3.02
5178 5491 4.574013 AGAAAACAGAGAGAGCAACACAAG 59.426 41.667 0.00 0.00 0.00 3.16
5179 5492 4.333649 CAGAAAACAGAGAGAGCAACACAA 59.666 41.667 0.00 0.00 0.00 3.33
5180 5493 3.873361 CAGAAAACAGAGAGAGCAACACA 59.127 43.478 0.00 0.00 0.00 3.72
5181 5494 3.303659 GCAGAAAACAGAGAGAGCAACAC 60.304 47.826 0.00 0.00 0.00 3.32
5182 5495 2.874701 GCAGAAAACAGAGAGAGCAACA 59.125 45.455 0.00 0.00 0.00 3.33
5183 5496 2.874701 TGCAGAAAACAGAGAGAGCAAC 59.125 45.455 0.00 0.00 0.00 4.17
5184 5497 2.874701 GTGCAGAAAACAGAGAGAGCAA 59.125 45.455 0.00 0.00 32.03 3.91
5185 5498 2.487934 GTGCAGAAAACAGAGAGAGCA 58.512 47.619 0.00 0.00 0.00 4.26
5186 5499 1.458827 CGTGCAGAAAACAGAGAGAGC 59.541 52.381 0.00 0.00 0.00 4.09
5187 5500 2.064762 CCGTGCAGAAAACAGAGAGAG 58.935 52.381 0.00 0.00 0.00 3.20
5188 5501 1.873903 GCCGTGCAGAAAACAGAGAGA 60.874 52.381 0.00 0.00 0.00 3.10
5189 5502 0.514691 GCCGTGCAGAAAACAGAGAG 59.485 55.000 0.00 0.00 0.00 3.20
5190 5503 0.884704 GGCCGTGCAGAAAACAGAGA 60.885 55.000 0.00 0.00 0.00 3.10
5191 5504 1.576421 GGCCGTGCAGAAAACAGAG 59.424 57.895 0.00 0.00 0.00 3.35
5192 5505 1.896660 GGGCCGTGCAGAAAACAGA 60.897 57.895 0.00 0.00 0.00 3.41
5193 5506 2.133742 CTGGGCCGTGCAGAAAACAG 62.134 60.000 0.00 0.00 0.00 3.16
5194 5507 2.124109 TGGGCCGTGCAGAAAACA 60.124 55.556 0.00 0.00 0.00 2.83
5195 5508 2.130073 GACTGGGCCGTGCAGAAAAC 62.130 60.000 13.73 0.46 0.00 2.43
5196 5509 1.896660 GACTGGGCCGTGCAGAAAA 60.897 57.895 13.73 0.00 0.00 2.29
5197 5510 2.281484 GACTGGGCCGTGCAGAAA 60.281 61.111 13.73 0.00 0.00 2.52
5198 5511 2.337879 AAAGACTGGGCCGTGCAGAA 62.338 55.000 13.73 0.00 0.00 3.02
5199 5512 2.731691 GAAAGACTGGGCCGTGCAGA 62.732 60.000 13.73 0.00 0.00 4.26
5200 5513 2.281761 AAAGACTGGGCCGTGCAG 60.282 61.111 5.99 5.99 0.00 4.41
5201 5514 2.281484 GAAAGACTGGGCCGTGCA 60.281 61.111 5.76 0.00 0.00 4.57
5202 5515 3.056328 GGAAAGACTGGGCCGTGC 61.056 66.667 5.76 0.00 0.00 5.34
5203 5516 1.228124 TTGGAAAGACTGGGCCGTG 60.228 57.895 5.76 0.18 0.00 4.94
5204 5517 1.228154 GTTGGAAAGACTGGGCCGT 60.228 57.895 0.00 0.00 0.00 5.68
5205 5518 1.971695 GGTTGGAAAGACTGGGCCG 60.972 63.158 0.00 0.00 0.00 6.13
5206 5519 1.152830 TGGTTGGAAAGACTGGGCC 59.847 57.895 0.00 0.00 0.00 5.80
5207 5520 1.515521 CGTGGTTGGAAAGACTGGGC 61.516 60.000 0.00 0.00 0.00 5.36
5208 5521 0.889186 CCGTGGTTGGAAAGACTGGG 60.889 60.000 0.00 0.00 0.00 4.45
5209 5522 0.107831 TCCGTGGTTGGAAAGACTGG 59.892 55.000 0.00 0.00 34.30 4.00
5210 5523 1.202651 ACTCCGTGGTTGGAAAGACTG 60.203 52.381 0.00 0.00 37.64 3.51
5211 5524 1.129058 ACTCCGTGGTTGGAAAGACT 58.871 50.000 0.00 0.00 37.64 3.24
5212 5525 1.226746 CACTCCGTGGTTGGAAAGAC 58.773 55.000 0.00 0.00 37.64 3.01
5213 5526 3.698250 CACTCCGTGGTTGGAAAGA 57.302 52.632 0.00 0.00 37.64 2.52
5223 5536 1.238439 AAAAGCACATCCACTCCGTG 58.762 50.000 0.00 0.00 0.00 4.94
5224 5537 1.981256 AAAAAGCACATCCACTCCGT 58.019 45.000 0.00 0.00 0.00 4.69
5225 5538 2.161609 GGTAAAAAGCACATCCACTCCG 59.838 50.000 0.00 0.00 0.00 4.63
5226 5539 2.492088 GGGTAAAAAGCACATCCACTCC 59.508 50.000 0.00 0.00 0.00 3.85
5227 5540 2.161609 CGGGTAAAAAGCACATCCACTC 59.838 50.000 0.00 0.00 0.00 3.51
5228 5541 2.159382 CGGGTAAAAAGCACATCCACT 58.841 47.619 0.00 0.00 0.00 4.00
5229 5542 1.883926 ACGGGTAAAAAGCACATCCAC 59.116 47.619 0.00 0.00 0.00 4.02
5230 5543 2.279935 ACGGGTAAAAAGCACATCCA 57.720 45.000 0.00 0.00 0.00 3.41
5231 5544 2.554893 TGAACGGGTAAAAAGCACATCC 59.445 45.455 0.00 0.00 0.00 3.51
5232 5545 3.365969 CCTGAACGGGTAAAAAGCACATC 60.366 47.826 0.00 0.00 0.00 3.06
5233 5546 2.556622 CCTGAACGGGTAAAAAGCACAT 59.443 45.455 0.00 0.00 0.00 3.21
5234 5547 1.950909 CCTGAACGGGTAAAAAGCACA 59.049 47.619 0.00 0.00 0.00 4.57
5235 5548 1.951602 ACCTGAACGGGTAAAAAGCAC 59.048 47.619 3.23 0.00 37.90 4.40
5236 5549 2.223745 GACCTGAACGGGTAAAAAGCA 58.776 47.619 5.22 0.00 40.06 3.91
5237 5550 2.223745 TGACCTGAACGGGTAAAAAGC 58.776 47.619 5.22 0.00 40.06 3.51
5238 5551 4.131596 TCTTGACCTGAACGGGTAAAAAG 58.868 43.478 5.22 9.75 40.06 2.27
5239 5552 4.131596 CTCTTGACCTGAACGGGTAAAAA 58.868 43.478 5.22 1.09 40.06 1.94
5240 5553 3.735591 CTCTTGACCTGAACGGGTAAAA 58.264 45.455 5.22 3.33 40.06 1.52
5241 5554 2.549349 GCTCTTGACCTGAACGGGTAAA 60.549 50.000 5.22 3.98 40.06 2.01
5242 5555 1.001633 GCTCTTGACCTGAACGGGTAA 59.998 52.381 5.22 0.00 40.06 2.85
5243 5556 0.606604 GCTCTTGACCTGAACGGGTA 59.393 55.000 5.22 0.00 40.06 3.69
5244 5557 1.122019 AGCTCTTGACCTGAACGGGT 61.122 55.000 4.88 4.88 43.07 5.28
5245 5558 0.895530 TAGCTCTTGACCTGAACGGG 59.104 55.000 0.00 0.00 36.97 5.28
5246 5559 2.969628 ATAGCTCTTGACCTGAACGG 57.030 50.000 0.00 0.00 39.35 4.44
5247 5560 4.210120 GCAATATAGCTCTTGACCTGAACG 59.790 45.833 0.00 0.00 0.00 3.95
5248 5561 5.007136 GTGCAATATAGCTCTTGACCTGAAC 59.993 44.000 0.00 0.00 34.99 3.18
5249 5562 5.118990 GTGCAATATAGCTCTTGACCTGAA 58.881 41.667 0.00 0.00 34.99 3.02
5250 5563 4.697514 GTGCAATATAGCTCTTGACCTGA 58.302 43.478 0.00 0.00 34.99 3.86
5251 5564 3.492383 CGTGCAATATAGCTCTTGACCTG 59.508 47.826 0.00 0.00 34.99 4.00
5252 5565 3.384789 TCGTGCAATATAGCTCTTGACCT 59.615 43.478 0.00 0.00 34.99 3.85
5253 5566 3.717707 TCGTGCAATATAGCTCTTGACC 58.282 45.455 0.00 0.00 34.99 4.02
5254 5567 4.208047 CACTCGTGCAATATAGCTCTTGAC 59.792 45.833 0.00 0.00 34.99 3.18
5255 5568 4.142160 ACACTCGTGCAATATAGCTCTTGA 60.142 41.667 0.00 0.00 34.99 3.02
5256 5569 4.115516 ACACTCGTGCAATATAGCTCTTG 58.884 43.478 0.00 0.00 34.99 3.02
5257 5570 4.392921 ACACTCGTGCAATATAGCTCTT 57.607 40.909 0.00 0.00 34.99 2.85
5258 5571 4.580995 AGTACACTCGTGCAATATAGCTCT 59.419 41.667 0.00 0.00 34.99 4.09
5259 5572 4.861210 AGTACACTCGTGCAATATAGCTC 58.139 43.478 0.00 0.00 34.99 4.09
5260 5573 4.861210 GAGTACACTCGTGCAATATAGCT 58.139 43.478 0.00 0.00 32.78 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.