Multiple sequence alignment - TraesCS5D01G187900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G187900 chr5D 100.000 3457 0 0 1 3457 289686025 289689481 0.000000e+00 6384
1 TraesCS5D01G187900 chr7B 93.489 1966 100 8 1026 2988 648909289 648911229 0.000000e+00 2896
2 TraesCS5D01G187900 chr7B 83.732 879 120 19 1922 2789 648905752 648906618 0.000000e+00 809
3 TraesCS5D01G187900 chr7B 93.056 360 16 5 2990 3346 648911260 648911613 5.110000e-143 518
4 TraesCS5D01G187900 chr7B 88.321 411 39 7 1473 1876 648905329 648905737 5.190000e-133 484
5 TraesCS5D01G187900 chr7B 83.914 373 37 6 1102 1473 648904777 648905127 5.530000e-88 335
6 TraesCS5D01G187900 chr7B 86.429 140 19 0 1125 1264 649407764 649407903 1.660000e-33 154
7 TraesCS5D01G187900 chr7B 83.916 143 17 5 1125 1264 648783110 648783249 7.790000e-27 132
8 TraesCS5D01G187900 chr7B 86.441 118 12 3 1125 1240 648916773 648916888 3.620000e-25 126
9 TraesCS5D01G187900 chr7B 82.394 142 21 3 1125 1264 649211531 649211670 1.690000e-23 121
10 TraesCS5D01G187900 chr7B 79.592 147 30 0 1118 1264 648139227 648139373 4.720000e-19 106
11 TraesCS5D01G187900 chr7D 88.520 2352 180 43 1026 3346 581284094 581286386 0.000000e+00 2765
12 TraesCS5D01G187900 chr7D 84.984 1545 181 22 1102 2632 581271629 581273136 0.000000e+00 1520
13 TraesCS5D01G187900 chr7D 76.498 1702 282 66 1118 2782 548608971 548610591 0.000000e+00 819
14 TraesCS5D01G187900 chr7D 78.608 1178 181 36 1118 2266 548617145 548618280 0.000000e+00 713
15 TraesCS5D01G187900 chr7D 90.869 449 37 1 1 445 477923080 477922632 1.780000e-167 599
16 TraesCS5D01G187900 chr7D 77.971 345 45 13 1296 1630 580969525 580969202 1.640000e-43 187
17 TraesCS5D01G187900 chr7D 83.254 209 14 8 891 1079 581271313 581271520 4.590000e-39 172
18 TraesCS5D01G187900 chr7D 91.270 126 11 0 1139 1264 582085493 582085618 4.590000e-39 172
19 TraesCS5D01G187900 chr7D 85.600 125 14 3 1118 1240 581289810 581289932 1.010000e-25 128
20 TraesCS5D01G187900 chr7D 83.088 136 21 2 473 607 72118315 72118181 4.690000e-24 122
21 TraesCS5D01G187900 chr6D 93.289 447 28 2 1 445 361483342 361483788 0.000000e+00 658
22 TraesCS5D01G187900 chr1A 93.304 448 26 2 1 445 125098917 125098471 0.000000e+00 658
23 TraesCS5D01G187900 chr7A 78.448 1044 156 38 1118 2133 632383287 632384289 4.900000e-173 617
24 TraesCS5D01G187900 chr7A 75.620 1169 209 41 1125 2277 672950230 672951338 8.560000e-141 510
25 TraesCS5D01G187900 chr7A 72.334 947 202 36 1119 2054 672311640 672312537 3.450000e-60 243
26 TraesCS5D01G187900 chr7A 83.803 142 19 3 1125 1264 673244068 673244207 7.790000e-27 132
27 TraesCS5D01G187900 chr6A 91.855 442 34 1 2 441 357948384 357947943 1.760000e-172 616
28 TraesCS5D01G187900 chr6A 83.088 136 21 2 473 607 303241054 303240920 4.690000e-24 122
29 TraesCS5D01G187900 chr3D 91.648 443 32 1 8 445 499373350 499372908 2.950000e-170 608
30 TraesCS5D01G187900 chr3D 80.460 174 29 5 473 644 292860564 292860734 1.010000e-25 128
31 TraesCS5D01G187900 chr4D 90.745 443 37 2 6 445 148373130 148372689 3.840000e-164 588
32 TraesCS5D01G187900 chr4D 74.144 1226 241 43 1120 2323 379501349 379500178 4.100000e-119 438
33 TraesCS5D01G187900 chr4D 82.963 135 23 0 473 607 491588781 491588647 4.690000e-24 122
34 TraesCS5D01G187900 chr2A 90.179 448 39 3 1 445 115922798 115922353 2.310000e-161 579
35 TraesCS5D01G187900 chr3A 89.485 447 43 4 1 445 585649007 585649451 2.330000e-156 562
36 TraesCS5D01G187900 chr3A 78.947 190 38 2 486 673 470105643 470105454 1.010000e-25 128
37 TraesCS5D01G187900 chr3A 82.734 139 23 1 507 644 222446669 222446531 4.690000e-24 122
38 TraesCS5D01G187900 chr5A 89.262 447 45 3 1 445 634667441 634667886 1.080000e-154 556
39 TraesCS5D01G187900 chrUn 73.039 1428 287 57 1118 2508 93228282 93229648 6.900000e-112 414
40 TraesCS5D01G187900 chr4A 79.779 272 46 6 1903 2171 84935300 84935565 4.550000e-44 189
41 TraesCS5D01G187900 chr3B 80.460 174 31 3 473 644 386193094 386192922 2.800000e-26 130
42 TraesCS5D01G187900 chr3B 83.212 137 20 3 473 608 744867110 744866976 4.690000e-24 122
43 TraesCS5D01G187900 chr1D 83.088 136 21 2 473 607 263970214 263970348 4.690000e-24 122
44 TraesCS5D01G187900 chr1B 89.873 79 8 0 1135 1213 623962227 623962305 6.100000e-18 102


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G187900 chr5D 289686025 289689481 3456 False 6384.0 6384 100.0000 1 3457 1 chr5D.!!$F1 3456
1 TraesCS5D01G187900 chr7B 648904777 648911613 6836 False 1008.4 2896 88.5024 1026 3346 5 chr7B.!!$F6 2320
2 TraesCS5D01G187900 chr7D 581284094 581289932 5838 False 1446.5 2765 87.0600 1026 3346 2 chr7D.!!$F5 2320
3 TraesCS5D01G187900 chr7D 581271313 581273136 1823 False 846.0 1520 84.1190 891 2632 2 chr7D.!!$F4 1741
4 TraesCS5D01G187900 chr7D 548608971 548610591 1620 False 819.0 819 76.4980 1118 2782 1 chr7D.!!$F1 1664
5 TraesCS5D01G187900 chr7D 548617145 548618280 1135 False 713.0 713 78.6080 1118 2266 1 chr7D.!!$F2 1148
6 TraesCS5D01G187900 chr7A 632383287 632384289 1002 False 617.0 617 78.4480 1118 2133 1 chr7A.!!$F1 1015
7 TraesCS5D01G187900 chr7A 672950230 672951338 1108 False 510.0 510 75.6200 1125 2277 1 chr7A.!!$F3 1152
8 TraesCS5D01G187900 chr7A 672311640 672312537 897 False 243.0 243 72.3340 1119 2054 1 chr7A.!!$F2 935
9 TraesCS5D01G187900 chr4D 379500178 379501349 1171 True 438.0 438 74.1440 1120 2323 1 chr4D.!!$R2 1203
10 TraesCS5D01G187900 chrUn 93228282 93229648 1366 False 414.0 414 73.0390 1118 2508 1 chrUn.!!$F1 1390

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
381 382 0.036388 CGGCTAAACTGGGAGCTTCA 60.036 55.0 0.0 0.0 38.79 3.02 F
1527 1855 0.035534 TGTGTAATCCTGCCACGCAT 60.036 50.0 0.0 0.0 38.13 4.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1880 2247 0.036952 ACCATCAAGCAGACCGTCAG 60.037 55.0 0.40 0.0 0.0 3.51 R
3414 8289 0.108329 CCCGCGTCATGGTTACTTCT 60.108 55.0 4.92 0.0 0.0 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 9.463443 AGAATATTTTCTGTTGTTTTGCACTAC 57.537 29.630 0.00 0.00 40.74 2.73
30 31 9.243637 GAATATTTTCTGTTGTTTTGCACTACA 57.756 29.630 0.00 0.00 38.61 2.74
31 32 9.762933 AATATTTTCTGTTGTTTTGCACTACAT 57.237 25.926 1.26 0.00 39.91 2.29
32 33 9.762933 ATATTTTCTGTTGTTTTGCACTACATT 57.237 25.926 1.26 0.00 39.91 2.71
34 35 9.762933 ATTTTCTGTTGTTTTGCACTACATTAT 57.237 25.926 1.26 0.00 39.91 1.28
35 36 9.593134 TTTTCTGTTGTTTTGCACTACATTATT 57.407 25.926 1.26 0.00 39.91 1.40
36 37 9.593134 TTTCTGTTGTTTTGCACTACATTATTT 57.407 25.926 1.26 0.00 39.91 1.40
37 38 9.593134 TTCTGTTGTTTTGCACTACATTATTTT 57.407 25.926 1.26 0.00 39.91 1.82
38 39 9.593134 TCTGTTGTTTTGCACTACATTATTTTT 57.407 25.926 1.26 0.00 39.91 1.94
39 40 9.635632 CTGTTGTTTTGCACTACATTATTTTTG 57.364 29.630 1.26 0.00 39.91 2.44
40 41 8.119226 TGTTGTTTTGCACTACATTATTTTTGC 58.881 29.630 1.26 0.00 36.36 3.68
41 42 7.776933 TGTTTTGCACTACATTATTTTTGCA 57.223 28.000 0.00 0.00 38.17 4.08
42 43 7.849496 TGTTTTGCACTACATTATTTTTGCAG 58.151 30.769 0.00 0.00 40.80 4.41
43 44 7.042187 TGTTTTGCACTACATTATTTTTGCAGG 60.042 33.333 0.00 0.00 40.80 4.85
44 45 5.070770 TGCACTACATTATTTTTGCAGGG 57.929 39.130 0.00 0.00 35.13 4.45
45 46 4.769488 TGCACTACATTATTTTTGCAGGGA 59.231 37.500 0.00 0.00 35.13 4.20
46 47 5.421693 TGCACTACATTATTTTTGCAGGGAT 59.578 36.000 0.00 0.00 35.13 3.85
47 48 6.605194 TGCACTACATTATTTTTGCAGGGATA 59.395 34.615 0.00 0.00 35.13 2.59
48 49 7.287466 TGCACTACATTATTTTTGCAGGGATAT 59.713 33.333 0.00 0.00 35.13 1.63
49 50 8.143835 GCACTACATTATTTTTGCAGGGATATT 58.856 33.333 0.00 0.00 0.00 1.28
70 71 3.715618 TTTTCGATACATGTGCACGAC 57.284 42.857 13.13 0.00 32.89 4.34
71 72 2.355717 TTCGATACATGTGCACGACA 57.644 45.000 13.13 0.00 39.53 4.35
72 73 2.577449 TCGATACATGTGCACGACAT 57.423 45.000 13.13 2.47 46.98 3.06
73 74 2.459934 TCGATACATGTGCACGACATC 58.540 47.619 13.13 10.79 43.96 3.06
74 75 1.187921 CGATACATGTGCACGACATCG 59.812 52.381 20.75 20.75 43.96 3.84
75 76 1.522676 GATACATGTGCACGACATCGG 59.477 52.381 13.13 0.00 43.96 4.18
76 77 0.245266 TACATGTGCACGACATCGGT 59.755 50.000 13.13 4.88 43.96 4.69
77 78 1.014044 ACATGTGCACGACATCGGTC 61.014 55.000 13.13 0.00 43.96 4.79
78 79 0.737367 CATGTGCACGACATCGGTCT 60.737 55.000 13.13 0.00 43.96 3.85
79 80 0.815095 ATGTGCACGACATCGGTCTA 59.185 50.000 13.13 0.00 41.91 2.59
80 81 0.170339 TGTGCACGACATCGGTCTAG 59.830 55.000 13.13 0.00 44.95 2.43
81 82 1.138883 TGCACGACATCGGTCTAGC 59.861 57.895 6.21 2.69 44.95 3.42
82 83 1.589196 GCACGACATCGGTCTAGCC 60.589 63.158 6.21 0.00 44.95 3.93
91 92 4.253257 GGTCTAGCCGGCGTCTCG 62.253 72.222 23.20 8.96 0.00 4.04
105 106 4.052229 CTCGCCGTCACCGAGGTT 62.052 66.667 3.09 0.00 46.15 3.50
106 107 4.351938 TCGCCGTCACCGAGGTTG 62.352 66.667 0.00 0.00 35.63 3.77
111 112 3.998672 GTCACCGAGGTTGGCCGA 61.999 66.667 0.00 0.00 40.50 5.54
112 113 3.998672 TCACCGAGGTTGGCCGAC 61.999 66.667 15.51 15.51 40.50 4.79
119 120 2.668550 GGTTGGCCGACCTGTGTC 60.669 66.667 32.24 6.98 36.73 3.67
127 128 3.768632 GACCTGTGTCGACATCGC 58.231 61.111 23.12 9.72 39.60 4.58
128 129 1.805945 GACCTGTGTCGACATCGCC 60.806 63.158 23.12 9.32 39.60 5.54
129 130 2.880879 CCTGTGTCGACATCGCCG 60.881 66.667 23.12 5.32 39.60 6.46
130 131 3.545481 CTGTGTCGACATCGCCGC 61.545 66.667 23.12 8.13 39.60 6.53
144 145 4.012895 CCGCGCCACAACACTGTC 62.013 66.667 0.00 0.00 31.64 3.51
145 146 3.268603 CGCGCCACAACACTGTCA 61.269 61.111 0.00 0.00 31.64 3.58
146 147 2.606961 CGCGCCACAACACTGTCAT 61.607 57.895 0.00 0.00 31.64 3.06
147 148 1.081906 GCGCCACAACACTGTCATG 60.082 57.895 0.00 0.00 31.64 3.07
148 149 1.081906 CGCCACAACACTGTCATGC 60.082 57.895 0.00 0.00 31.64 4.06
149 150 1.286880 GCCACAACACTGTCATGCC 59.713 57.895 0.00 0.00 31.64 4.40
150 151 1.454572 GCCACAACACTGTCATGCCA 61.455 55.000 0.00 0.00 31.64 4.92
151 152 1.250328 CCACAACACTGTCATGCCAT 58.750 50.000 0.00 0.00 31.64 4.40
152 153 1.200716 CCACAACACTGTCATGCCATC 59.799 52.381 0.00 0.00 31.64 3.51
153 154 1.135888 CACAACACTGTCATGCCATCG 60.136 52.381 0.00 0.00 31.64 3.84
154 155 1.270785 ACAACACTGTCATGCCATCGA 60.271 47.619 0.00 0.00 0.00 3.59
155 156 1.395954 CAACACTGTCATGCCATCGAG 59.604 52.381 0.00 0.00 0.00 4.04
156 157 0.742281 ACACTGTCATGCCATCGAGC 60.742 55.000 0.00 0.00 0.00 5.03
157 158 1.153289 ACTGTCATGCCATCGAGCC 60.153 57.895 0.00 0.00 0.00 4.70
158 159 2.202919 TGTCATGCCATCGAGCCG 60.203 61.111 0.00 0.00 0.00 5.52
159 160 2.106938 GTCATGCCATCGAGCCGA 59.893 61.111 0.00 0.00 41.13 5.54
160 161 2.106938 TCATGCCATCGAGCCGAC 59.893 61.111 0.00 0.00 39.18 4.79
161 162 2.969238 CATGCCATCGAGCCGACC 60.969 66.667 0.00 0.00 39.18 4.79
162 163 3.157252 ATGCCATCGAGCCGACCT 61.157 61.111 0.00 0.00 39.18 3.85
163 164 3.157217 ATGCCATCGAGCCGACCTC 62.157 63.158 0.00 0.00 39.18 3.85
183 184 3.012560 GCGCTCAGGCCATATTTCT 57.987 52.632 5.01 0.00 34.44 2.52
184 185 1.312815 GCGCTCAGGCCATATTTCTT 58.687 50.000 5.01 0.00 34.44 2.52
185 186 1.678101 GCGCTCAGGCCATATTTCTTT 59.322 47.619 5.01 0.00 34.44 2.52
186 187 2.878406 GCGCTCAGGCCATATTTCTTTA 59.122 45.455 5.01 0.00 34.44 1.85
187 188 3.315191 GCGCTCAGGCCATATTTCTTTAA 59.685 43.478 5.01 0.00 34.44 1.52
188 189 4.022849 GCGCTCAGGCCATATTTCTTTAAT 60.023 41.667 5.01 0.00 34.44 1.40
189 190 5.507985 GCGCTCAGGCCATATTTCTTTAATT 60.508 40.000 5.01 0.00 34.44 1.40
190 191 6.293955 GCGCTCAGGCCATATTTCTTTAATTA 60.294 38.462 5.01 0.00 34.44 1.40
191 192 7.078228 CGCTCAGGCCATATTTCTTTAATTAC 58.922 38.462 5.01 0.00 34.44 1.89
192 193 7.041098 CGCTCAGGCCATATTTCTTTAATTACT 60.041 37.037 5.01 0.00 34.44 2.24
193 194 8.633561 GCTCAGGCCATATTTCTTTAATTACTT 58.366 33.333 5.01 0.00 0.00 2.24
269 270 8.779354 TTTTTATTACTTTTGGTTTGCACTGT 57.221 26.923 0.00 0.00 0.00 3.55
270 271 8.779354 TTTTATTACTTTTGGTTTGCACTGTT 57.221 26.923 0.00 0.00 0.00 3.16
271 272 8.779354 TTTATTACTTTTGGTTTGCACTGTTT 57.221 26.923 0.00 0.00 0.00 2.83
272 273 6.902224 ATTACTTTTGGTTTGCACTGTTTC 57.098 33.333 0.00 0.00 0.00 2.78
273 274 4.264460 ACTTTTGGTTTGCACTGTTTCA 57.736 36.364 0.00 0.00 0.00 2.69
274 275 4.831107 ACTTTTGGTTTGCACTGTTTCAT 58.169 34.783 0.00 0.00 0.00 2.57
275 276 4.630940 ACTTTTGGTTTGCACTGTTTCATG 59.369 37.500 0.00 0.00 0.00 3.07
276 277 3.883830 TTGGTTTGCACTGTTTCATGT 57.116 38.095 0.00 0.00 0.00 3.21
277 278 3.162202 TGGTTTGCACTGTTTCATGTG 57.838 42.857 0.00 0.00 37.26 3.21
283 284 2.410785 CACTGTTTCATGTGCACAGG 57.589 50.000 24.94 24.94 41.99 4.00
284 285 1.677576 CACTGTTTCATGTGCACAGGT 59.322 47.619 28.68 9.39 41.99 4.00
285 286 2.877786 CACTGTTTCATGTGCACAGGTA 59.122 45.455 28.68 18.61 41.99 3.08
286 287 3.314913 CACTGTTTCATGTGCACAGGTAA 59.685 43.478 28.68 23.21 41.99 2.85
287 288 3.951037 ACTGTTTCATGTGCACAGGTAAA 59.049 39.130 28.68 22.76 41.99 2.01
288 289 4.584325 ACTGTTTCATGTGCACAGGTAAAT 59.416 37.500 28.68 13.07 41.99 1.40
289 290 5.068987 ACTGTTTCATGTGCACAGGTAAATT 59.931 36.000 28.68 11.71 41.99 1.82
290 291 5.288015 TGTTTCATGTGCACAGGTAAATTG 58.712 37.500 28.68 18.10 0.00 2.32
291 292 5.068329 TGTTTCATGTGCACAGGTAAATTGA 59.932 36.000 28.68 20.02 0.00 2.57
292 293 4.764679 TCATGTGCACAGGTAAATTGAC 57.235 40.909 28.68 0.00 0.00 3.18
293 294 3.188254 TCATGTGCACAGGTAAATTGACG 59.812 43.478 28.68 4.52 0.00 4.35
294 295 1.265635 TGTGCACAGGTAAATTGACGC 59.734 47.619 17.42 0.00 0.00 5.19
295 296 0.878416 TGCACAGGTAAATTGACGCC 59.122 50.000 0.00 0.00 0.00 5.68
296 297 0.179200 GCACAGGTAAATTGACGCCG 60.179 55.000 0.00 0.00 0.00 6.46
297 298 1.434555 CACAGGTAAATTGACGCCGA 58.565 50.000 0.00 0.00 0.00 5.54
298 299 1.127951 CACAGGTAAATTGACGCCGAC 59.872 52.381 0.00 0.00 0.00 4.79
299 300 0.725117 CAGGTAAATTGACGCCGACC 59.275 55.000 0.00 0.00 0.00 4.79
300 301 0.611714 AGGTAAATTGACGCCGACCT 59.388 50.000 0.00 0.00 32.38 3.85
301 302 0.725117 GGTAAATTGACGCCGACCTG 59.275 55.000 0.00 0.00 0.00 4.00
302 303 1.435577 GTAAATTGACGCCGACCTGT 58.564 50.000 0.00 0.00 0.00 4.00
303 304 1.802365 GTAAATTGACGCCGACCTGTT 59.198 47.619 0.00 0.00 0.00 3.16
304 305 1.314730 AAATTGACGCCGACCTGTTT 58.685 45.000 0.00 0.00 0.00 2.83
305 306 0.872388 AATTGACGCCGACCTGTTTC 59.128 50.000 0.00 0.00 0.00 2.78
306 307 1.289109 ATTGACGCCGACCTGTTTCG 61.289 55.000 0.00 0.00 38.80 3.46
307 308 2.049802 GACGCCGACCTGTTTCGA 60.050 61.111 0.00 0.00 41.78 3.71
308 309 2.355481 ACGCCGACCTGTTTCGAC 60.355 61.111 0.00 0.00 41.78 4.20
309 310 2.355363 CGCCGACCTGTTTCGACA 60.355 61.111 0.00 0.00 41.78 4.35
310 311 2.654912 CGCCGACCTGTTTCGACAC 61.655 63.158 0.00 0.00 41.78 3.67
311 312 2.654912 GCCGACCTGTTTCGACACG 61.655 63.158 0.00 0.00 41.78 4.49
312 313 1.299620 CCGACCTGTTTCGACACGT 60.300 57.895 0.00 0.00 41.78 4.49
313 314 1.273455 CCGACCTGTTTCGACACGTC 61.273 60.000 0.00 0.00 41.78 4.34
349 350 3.480133 GGCATCACCCGCCTACCT 61.480 66.667 0.00 0.00 46.56 3.08
350 351 2.203070 GCATCACCCGCCTACCTG 60.203 66.667 0.00 0.00 0.00 4.00
351 352 2.203070 CATCACCCGCCTACCTGC 60.203 66.667 0.00 0.00 0.00 4.85
352 353 2.365635 ATCACCCGCCTACCTGCT 60.366 61.111 0.00 0.00 0.00 4.24
353 354 2.435693 ATCACCCGCCTACCTGCTC 61.436 63.158 0.00 0.00 0.00 4.26
354 355 4.162690 CACCCGCCTACCTGCTCC 62.163 72.222 0.00 0.00 0.00 4.70
357 358 4.208686 CCGCCTACCTGCTCCGTC 62.209 72.222 0.00 0.00 0.00 4.79
358 359 3.449227 CGCCTACCTGCTCCGTCA 61.449 66.667 0.00 0.00 0.00 4.35
359 360 2.184579 GCCTACCTGCTCCGTCAC 59.815 66.667 0.00 0.00 0.00 3.67
360 361 2.893398 CCTACCTGCTCCGTCACC 59.107 66.667 0.00 0.00 0.00 4.02
361 362 1.682684 CCTACCTGCTCCGTCACCT 60.683 63.158 0.00 0.00 0.00 4.00
362 363 1.668101 CCTACCTGCTCCGTCACCTC 61.668 65.000 0.00 0.00 0.00 3.85
363 364 1.994507 CTACCTGCTCCGTCACCTCG 61.995 65.000 0.00 0.00 0.00 4.63
370 371 4.180496 CCGTCACCTCGGCTAAAC 57.820 61.111 0.00 0.00 43.96 2.01
371 372 1.590147 CCGTCACCTCGGCTAAACT 59.410 57.895 0.00 0.00 43.96 2.66
372 373 0.736325 CCGTCACCTCGGCTAAACTG 60.736 60.000 0.00 0.00 43.96 3.16
373 374 0.736325 CGTCACCTCGGCTAAACTGG 60.736 60.000 0.00 0.00 0.00 4.00
374 375 0.391263 GTCACCTCGGCTAAACTGGG 60.391 60.000 0.00 0.00 0.00 4.45
375 376 0.543410 TCACCTCGGCTAAACTGGGA 60.543 55.000 0.00 0.00 0.00 4.37
376 377 0.108138 CACCTCGGCTAAACTGGGAG 60.108 60.000 0.00 0.00 0.00 4.30
377 378 1.153349 CCTCGGCTAAACTGGGAGC 60.153 63.158 0.00 0.00 38.00 4.70
378 379 1.617947 CCTCGGCTAAACTGGGAGCT 61.618 60.000 0.00 0.00 38.79 4.09
379 380 0.250513 CTCGGCTAAACTGGGAGCTT 59.749 55.000 0.00 0.00 38.79 3.74
380 381 0.249398 TCGGCTAAACTGGGAGCTTC 59.751 55.000 0.00 0.00 38.79 3.86
381 382 0.036388 CGGCTAAACTGGGAGCTTCA 60.036 55.000 0.00 0.00 38.79 3.02
382 383 1.454201 GGCTAAACTGGGAGCTTCAC 58.546 55.000 0.00 0.00 38.79 3.18
383 384 1.454201 GCTAAACTGGGAGCTTCACC 58.546 55.000 0.00 0.00 35.73 4.02
384 385 1.003696 GCTAAACTGGGAGCTTCACCT 59.996 52.381 0.00 0.00 35.73 4.00
385 386 2.937433 GCTAAACTGGGAGCTTCACCTC 60.937 54.545 0.00 0.00 35.73 3.85
386 387 1.439543 AAACTGGGAGCTTCACCTCT 58.560 50.000 0.00 0.00 32.43 3.69
387 388 0.980423 AACTGGGAGCTTCACCTCTC 59.020 55.000 0.00 0.00 32.81 3.20
388 389 0.907230 ACTGGGAGCTTCACCTCTCC 60.907 60.000 0.00 0.00 46.25 3.71
391 392 2.366469 GGAGCTTCACCTCTCCACA 58.634 57.895 3.60 0.00 46.24 4.17
392 393 0.248843 GGAGCTTCACCTCTCCACAG 59.751 60.000 3.60 0.00 46.24 3.66
393 394 0.390998 GAGCTTCACCTCTCCACAGC 60.391 60.000 0.00 0.00 0.00 4.40
394 395 1.739562 GCTTCACCTCTCCACAGCG 60.740 63.158 0.00 0.00 0.00 5.18
395 396 1.079543 CTTCACCTCTCCACAGCGG 60.080 63.158 0.00 0.00 0.00 5.52
396 397 1.821061 CTTCACCTCTCCACAGCGGT 61.821 60.000 0.00 0.00 38.36 5.68
397 398 1.816863 TTCACCTCTCCACAGCGGTC 61.817 60.000 0.00 0.00 35.36 4.79
398 399 3.374402 ACCTCTCCACAGCGGTCG 61.374 66.667 0.00 0.00 31.50 4.79
399 400 3.374402 CCTCTCCACAGCGGTCGT 61.374 66.667 0.00 0.00 35.57 4.34
400 401 2.126307 CTCTCCACAGCGGTCGTG 60.126 66.667 9.33 9.33 35.57 4.35
401 402 4.357947 TCTCCACAGCGGTCGTGC 62.358 66.667 10.43 0.00 35.57 5.34
411 412 4.961511 GGTCGTGCTGTGTCGCCA 62.962 66.667 0.00 0.00 0.00 5.69
412 413 3.702555 GTCGTGCTGTGTCGCCAC 61.703 66.667 0.00 0.00 42.19 5.01
413 414 3.911698 TCGTGCTGTGTCGCCACT 61.912 61.111 0.00 0.00 42.34 4.00
414 415 2.967076 CGTGCTGTGTCGCCACTT 60.967 61.111 0.00 0.00 42.34 3.16
415 416 2.939022 GTGCTGTGTCGCCACTTC 59.061 61.111 0.00 0.00 42.34 3.01
416 417 2.661537 TGCTGTGTCGCCACTTCG 60.662 61.111 0.00 0.00 42.34 3.79
417 418 3.414700 GCTGTGTCGCCACTTCGG 61.415 66.667 0.00 0.00 42.34 4.30
418 419 2.338620 CTGTGTCGCCACTTCGGA 59.661 61.111 0.00 0.00 42.34 4.55
419 420 1.734477 CTGTGTCGCCACTTCGGAG 60.734 63.158 0.00 0.00 42.34 4.63
420 421 2.338984 GTGTCGCCACTTCGGAGT 59.661 61.111 0.00 0.00 38.61 3.85
433 434 4.803426 GGAGTGCCGAGCTGTCCG 62.803 72.222 0.00 0.00 0.00 4.79
446 447 3.766691 GTCCGCTCGGCCACCTTA 61.767 66.667 2.24 0.00 34.68 2.69
447 448 2.998480 TCCGCTCGGCCACCTTAA 60.998 61.111 2.24 0.00 34.68 1.85
448 449 2.046700 CCGCTCGGCCACCTTAAA 60.047 61.111 2.24 0.00 0.00 1.52
449 450 1.673009 CCGCTCGGCCACCTTAAAA 60.673 57.895 2.24 0.00 0.00 1.52
450 451 1.238625 CCGCTCGGCCACCTTAAAAA 61.239 55.000 2.24 0.00 0.00 1.94
451 452 0.168128 CGCTCGGCCACCTTAAAAAG 59.832 55.000 2.24 0.00 0.00 2.27
465 466 6.684609 CCTTAAAAAGGCATTTTACGTCAC 57.315 37.500 9.82 0.00 41.87 3.67
466 467 5.631929 CCTTAAAAAGGCATTTTACGTCACC 59.368 40.000 9.82 0.00 41.87 4.02
467 468 3.653539 AAAAGGCATTTTACGTCACCC 57.346 42.857 7.41 0.00 36.85 4.61
468 469 1.161843 AAGGCATTTTACGTCACCCG 58.838 50.000 0.00 0.00 44.03 5.28
469 470 0.322322 AGGCATTTTACGTCACCCGA 59.678 50.000 0.00 0.00 40.70 5.14
470 471 1.158434 GGCATTTTACGTCACCCGAA 58.842 50.000 0.00 0.00 40.70 4.30
471 472 1.536331 GGCATTTTACGTCACCCGAAA 59.464 47.619 0.00 0.00 40.70 3.46
472 473 2.413634 GGCATTTTACGTCACCCGAAAG 60.414 50.000 0.00 0.00 40.70 2.62
473 474 2.846693 CATTTTACGTCACCCGAAAGC 58.153 47.619 0.00 0.00 40.70 3.51
474 475 1.228533 TTTTACGTCACCCGAAAGCC 58.771 50.000 0.00 0.00 40.70 4.35
475 476 0.603439 TTTACGTCACCCGAAAGCCC 60.603 55.000 0.00 0.00 40.70 5.19
476 477 1.756408 TTACGTCACCCGAAAGCCCA 61.756 55.000 0.00 0.00 40.70 5.36
477 478 1.546589 TACGTCACCCGAAAGCCCAT 61.547 55.000 0.00 0.00 40.70 4.00
478 479 1.674322 CGTCACCCGAAAGCCCATT 60.674 57.895 0.00 0.00 39.56 3.16
479 480 1.883021 GTCACCCGAAAGCCCATTG 59.117 57.895 0.00 0.00 0.00 2.82
480 481 0.608035 GTCACCCGAAAGCCCATTGA 60.608 55.000 0.00 0.00 0.00 2.57
481 482 0.111446 TCACCCGAAAGCCCATTGAA 59.889 50.000 0.00 0.00 0.00 2.69
482 483 0.965439 CACCCGAAAGCCCATTGAAA 59.035 50.000 0.00 0.00 0.00 2.69
483 484 1.067635 CACCCGAAAGCCCATTGAAAG 60.068 52.381 0.00 0.00 0.00 2.62
484 485 1.203001 ACCCGAAAGCCCATTGAAAGA 60.203 47.619 0.00 0.00 0.00 2.52
485 486 2.102578 CCCGAAAGCCCATTGAAAGAT 58.897 47.619 0.00 0.00 0.00 2.40
486 487 2.497273 CCCGAAAGCCCATTGAAAGATT 59.503 45.455 0.00 0.00 0.00 2.40
487 488 3.514645 CCGAAAGCCCATTGAAAGATTG 58.485 45.455 0.00 0.00 0.00 2.67
488 489 3.193267 CCGAAAGCCCATTGAAAGATTGA 59.807 43.478 0.00 0.00 0.00 2.57
489 490 4.168760 CGAAAGCCCATTGAAAGATTGAC 58.831 43.478 0.00 0.00 0.00 3.18
490 491 4.498241 GAAAGCCCATTGAAAGATTGACC 58.502 43.478 0.00 0.00 0.00 4.02
491 492 3.173953 AGCCCATTGAAAGATTGACCA 57.826 42.857 0.00 0.00 0.00 4.02
492 493 3.716431 AGCCCATTGAAAGATTGACCAT 58.284 40.909 0.00 0.00 0.00 3.55
493 494 4.098894 AGCCCATTGAAAGATTGACCATT 58.901 39.130 0.00 0.00 0.00 3.16
494 495 5.271598 AGCCCATTGAAAGATTGACCATTA 58.728 37.500 0.00 0.00 0.00 1.90
495 496 5.127682 AGCCCATTGAAAGATTGACCATTAC 59.872 40.000 0.00 0.00 0.00 1.89
496 497 5.127682 GCCCATTGAAAGATTGACCATTACT 59.872 40.000 0.00 0.00 0.00 2.24
497 498 6.351286 GCCCATTGAAAGATTGACCATTACTT 60.351 38.462 0.00 0.00 0.00 2.24
498 499 7.614494 CCCATTGAAAGATTGACCATTACTTT 58.386 34.615 0.00 0.00 34.24 2.66
499 500 7.546667 CCCATTGAAAGATTGACCATTACTTTG 59.453 37.037 0.00 0.00 32.20 2.77
500 501 8.306038 CCATTGAAAGATTGACCATTACTTTGA 58.694 33.333 0.00 0.00 32.20 2.69
501 502 9.695526 CATTGAAAGATTGACCATTACTTTGAA 57.304 29.630 0.00 0.00 32.20 2.69
527 528 7.581011 AAATCATAGCAAATTCGTTTGAACC 57.419 32.000 5.17 0.00 36.81 3.62
528 529 5.054390 TCATAGCAAATTCGTTTGAACCC 57.946 39.130 5.17 0.00 36.81 4.11
529 530 4.520874 TCATAGCAAATTCGTTTGAACCCA 59.479 37.500 5.17 0.00 36.81 4.51
530 531 5.184864 TCATAGCAAATTCGTTTGAACCCAT 59.815 36.000 5.17 0.00 36.81 4.00
531 532 6.375736 TCATAGCAAATTCGTTTGAACCCATA 59.624 34.615 5.17 0.00 36.81 2.74
532 533 5.461032 AGCAAATTCGTTTGAACCCATAA 57.539 34.783 5.17 0.00 36.81 1.90
533 534 5.848406 AGCAAATTCGTTTGAACCCATAAA 58.152 33.333 5.17 0.00 36.81 1.40
534 535 6.284459 AGCAAATTCGTTTGAACCCATAAAA 58.716 32.000 5.17 0.00 36.81 1.52
535 536 6.763610 AGCAAATTCGTTTGAACCCATAAAAA 59.236 30.769 5.17 0.00 36.81 1.94
536 537 7.443879 AGCAAATTCGTTTGAACCCATAAAAAT 59.556 29.630 5.17 0.00 36.81 1.82
537 538 8.713271 GCAAATTCGTTTGAACCCATAAAAATA 58.287 29.630 5.17 0.00 36.81 1.40
539 540 9.765795 AAATTCGTTTGAACCCATAAAAATACA 57.234 25.926 0.00 0.00 36.81 2.29
540 541 9.765795 AATTCGTTTGAACCCATAAAAATACAA 57.234 25.926 0.00 0.00 36.81 2.41
541 542 9.765795 ATTCGTTTGAACCCATAAAAATACAAA 57.234 25.926 0.00 0.00 36.81 2.83
542 543 9.765795 TTCGTTTGAACCCATAAAAATACAAAT 57.234 25.926 0.00 0.00 0.00 2.32
586 587 9.353431 TGAAAAATATCACCTATATGTGCATGT 57.647 29.630 3.46 0.00 36.17 3.21
587 588 9.831737 GAAAAATATCACCTATATGTGCATGTC 57.168 33.333 3.46 0.00 36.17 3.06
588 589 8.922931 AAAATATCACCTATATGTGCATGTCA 57.077 30.769 3.46 0.00 36.17 3.58
589 590 9.524496 AAAATATCACCTATATGTGCATGTCAT 57.476 29.630 3.46 9.64 36.17 3.06
590 591 9.524496 AAATATCACCTATATGTGCATGTCATT 57.476 29.630 9.91 3.41 36.17 2.57
591 592 9.524496 AATATCACCTATATGTGCATGTCATTT 57.476 29.630 9.91 6.19 36.17 2.32
592 593 6.622833 TCACCTATATGTGCATGTCATTTG 57.377 37.500 9.91 3.34 36.17 2.32
593 594 5.008911 TCACCTATATGTGCATGTCATTTGC 59.991 40.000 9.91 0.00 40.55 3.68
600 601 3.172229 TGCATGTCATTTGCATCCATG 57.828 42.857 0.00 0.00 44.73 3.66
601 602 2.761208 TGCATGTCATTTGCATCCATGA 59.239 40.909 12.77 7.43 44.73 3.07
602 603 3.181480 TGCATGTCATTTGCATCCATGAG 60.181 43.478 12.77 2.07 44.73 2.90
603 604 3.067601 GCATGTCATTTGCATCCATGAGA 59.932 43.478 12.77 8.72 39.90 3.27
604 605 4.440940 GCATGTCATTTGCATCCATGAGAA 60.441 41.667 12.77 3.63 39.90 2.87
605 606 5.656480 CATGTCATTTGCATCCATGAGAAA 58.344 37.500 0.00 0.00 35.96 2.52
606 607 5.725325 TGTCATTTGCATCCATGAGAAAA 57.275 34.783 0.00 0.00 29.85 2.29
607 608 6.288941 TGTCATTTGCATCCATGAGAAAAT 57.711 33.333 0.00 0.00 29.85 1.82
608 609 7.407393 TGTCATTTGCATCCATGAGAAAATA 57.593 32.000 0.00 0.00 29.85 1.40
609 610 7.259882 TGTCATTTGCATCCATGAGAAAATAC 58.740 34.615 0.00 0.00 29.85 1.89
610 611 7.123098 TGTCATTTGCATCCATGAGAAAATACT 59.877 33.333 0.00 0.00 29.85 2.12
611 612 7.434307 GTCATTTGCATCCATGAGAAAATACTG 59.566 37.037 0.00 0.00 29.85 2.74
612 613 7.339976 TCATTTGCATCCATGAGAAAATACTGA 59.660 33.333 0.00 0.00 0.00 3.41
613 614 7.649533 TTTGCATCCATGAGAAAATACTGAT 57.350 32.000 0.00 0.00 0.00 2.90
614 615 7.649533 TTGCATCCATGAGAAAATACTGATT 57.350 32.000 0.00 0.00 0.00 2.57
615 616 8.750515 TTGCATCCATGAGAAAATACTGATTA 57.249 30.769 0.00 0.00 0.00 1.75
616 617 8.750515 TGCATCCATGAGAAAATACTGATTAA 57.249 30.769 0.00 0.00 0.00 1.40
617 618 9.187996 TGCATCCATGAGAAAATACTGATTAAA 57.812 29.630 0.00 0.00 0.00 1.52
618 619 9.455847 GCATCCATGAGAAAATACTGATTAAAC 57.544 33.333 0.00 0.00 0.00 2.01
730 731 7.921786 TGTTATGGAATTTTCAGAGTAGTGG 57.078 36.000 0.00 0.00 0.00 4.00
731 732 7.458397 TGTTATGGAATTTTCAGAGTAGTGGT 58.542 34.615 0.00 0.00 0.00 4.16
732 733 7.606456 TGTTATGGAATTTTCAGAGTAGTGGTC 59.394 37.037 0.00 0.00 0.00 4.02
733 734 5.560722 TGGAATTTTCAGAGTAGTGGTCA 57.439 39.130 0.00 0.00 0.00 4.02
734 735 5.935945 TGGAATTTTCAGAGTAGTGGTCAA 58.064 37.500 0.00 0.00 0.00 3.18
735 736 6.361433 TGGAATTTTCAGAGTAGTGGTCAAA 58.639 36.000 0.00 0.00 0.00 2.69
736 737 7.004086 TGGAATTTTCAGAGTAGTGGTCAAAT 58.996 34.615 0.00 0.00 0.00 2.32
737 738 7.040478 TGGAATTTTCAGAGTAGTGGTCAAATG 60.040 37.037 0.00 0.00 0.00 2.32
738 739 7.040409 GGAATTTTCAGAGTAGTGGTCAAATGT 60.040 37.037 0.00 0.00 0.00 2.71
739 740 7.823745 ATTTTCAGAGTAGTGGTCAAATGTT 57.176 32.000 0.00 0.00 0.00 2.71
740 741 6.861065 TTTCAGAGTAGTGGTCAAATGTTC 57.139 37.500 0.00 0.00 0.00 3.18
741 742 5.545063 TCAGAGTAGTGGTCAAATGTTCA 57.455 39.130 0.00 0.00 0.00 3.18
742 743 5.924356 TCAGAGTAGTGGTCAAATGTTCAA 58.076 37.500 0.00 0.00 0.00 2.69
743 744 6.353323 TCAGAGTAGTGGTCAAATGTTCAAA 58.647 36.000 0.00 0.00 0.00 2.69
744 745 6.483307 TCAGAGTAGTGGTCAAATGTTCAAAG 59.517 38.462 0.00 0.00 0.00 2.77
745 746 5.765182 AGAGTAGTGGTCAAATGTTCAAAGG 59.235 40.000 0.00 0.00 0.00 3.11
746 747 5.690865 AGTAGTGGTCAAATGTTCAAAGGA 58.309 37.500 0.00 0.00 0.00 3.36
747 748 4.918810 AGTGGTCAAATGTTCAAAGGAC 57.081 40.909 0.00 0.00 0.00 3.85
748 749 4.277476 AGTGGTCAAATGTTCAAAGGACA 58.723 39.130 0.00 0.00 0.00 4.02
749 750 4.895297 AGTGGTCAAATGTTCAAAGGACAT 59.105 37.500 0.00 0.00 39.31 3.06
750 751 5.363580 AGTGGTCAAATGTTCAAAGGACATT 59.636 36.000 0.00 0.00 46.58 2.71
751 752 5.691754 GTGGTCAAATGTTCAAAGGACATTC 59.308 40.000 4.27 0.00 44.55 2.67
752 753 5.362143 TGGTCAAATGTTCAAAGGACATTCA 59.638 36.000 4.27 0.00 44.55 2.57
753 754 5.922544 GGTCAAATGTTCAAAGGACATTCAG 59.077 40.000 4.27 1.79 44.55 3.02
754 755 5.922544 GTCAAATGTTCAAAGGACATTCAGG 59.077 40.000 4.27 0.00 44.55 3.86
755 756 4.525912 AATGTTCAAAGGACATTCAGGC 57.474 40.909 0.00 0.00 42.40 4.85
756 757 2.942804 TGTTCAAAGGACATTCAGGCA 58.057 42.857 0.00 0.00 0.00 4.75
757 758 3.295093 TGTTCAAAGGACATTCAGGCAA 58.705 40.909 0.00 0.00 0.00 4.52
758 759 3.703556 TGTTCAAAGGACATTCAGGCAAA 59.296 39.130 0.00 0.00 0.00 3.68
759 760 4.051237 GTTCAAAGGACATTCAGGCAAAC 58.949 43.478 0.00 0.00 0.00 2.93
760 761 3.565307 TCAAAGGACATTCAGGCAAACT 58.435 40.909 0.00 0.00 0.00 2.66
761 762 4.724399 TCAAAGGACATTCAGGCAAACTA 58.276 39.130 0.00 0.00 0.00 2.24
762 763 5.136828 TCAAAGGACATTCAGGCAAACTAA 58.863 37.500 0.00 0.00 0.00 2.24
763 764 5.596361 TCAAAGGACATTCAGGCAAACTAAA 59.404 36.000 0.00 0.00 0.00 1.85
764 765 6.097554 TCAAAGGACATTCAGGCAAACTAAAA 59.902 34.615 0.00 0.00 0.00 1.52
765 766 6.670695 AAGGACATTCAGGCAAACTAAAAT 57.329 33.333 0.00 0.00 0.00 1.82
766 767 7.775053 AAGGACATTCAGGCAAACTAAAATA 57.225 32.000 0.00 0.00 0.00 1.40
767 768 7.158099 AGGACATTCAGGCAAACTAAAATAC 57.842 36.000 0.00 0.00 0.00 1.89
768 769 6.948309 AGGACATTCAGGCAAACTAAAATACT 59.052 34.615 0.00 0.00 0.00 2.12
769 770 7.451566 AGGACATTCAGGCAAACTAAAATACTT 59.548 33.333 0.00 0.00 0.00 2.24
770 771 8.088365 GGACATTCAGGCAAACTAAAATACTTT 58.912 33.333 0.00 0.00 0.00 2.66
771 772 9.476202 GACATTCAGGCAAACTAAAATACTTTT 57.524 29.630 0.00 0.00 36.67 2.27
772 773 9.476202 ACATTCAGGCAAACTAAAATACTTTTC 57.524 29.630 0.00 0.00 34.19 2.29
773 774 9.696917 CATTCAGGCAAACTAAAATACTTTTCT 57.303 29.630 0.00 0.00 34.19 2.52
776 777 9.010029 TCAGGCAAACTAAAATACTTTTCTAGG 57.990 33.333 0.00 0.00 34.19 3.02
777 778 8.244113 CAGGCAAACTAAAATACTTTTCTAGGG 58.756 37.037 0.00 0.00 34.19 3.53
778 779 7.396339 AGGCAAACTAAAATACTTTTCTAGGGG 59.604 37.037 0.00 0.00 34.19 4.79
779 780 7.033791 GCAAACTAAAATACTTTTCTAGGGGC 58.966 38.462 0.00 0.00 34.19 5.80
780 781 7.309560 GCAAACTAAAATACTTTTCTAGGGGCA 60.310 37.037 0.00 0.00 34.19 5.36
781 782 8.581578 CAAACTAAAATACTTTTCTAGGGGCAA 58.418 33.333 0.00 0.00 34.19 4.52
782 783 7.939784 ACTAAAATACTTTTCTAGGGGCAAG 57.060 36.000 0.00 0.00 34.19 4.01
783 784 6.890268 ACTAAAATACTTTTCTAGGGGCAAGG 59.110 38.462 0.00 0.00 34.19 3.61
784 785 5.530176 AAATACTTTTCTAGGGGCAAGGA 57.470 39.130 0.00 0.00 0.00 3.36
785 786 5.734031 AATACTTTTCTAGGGGCAAGGAT 57.266 39.130 0.00 0.00 0.00 3.24
786 787 5.734031 ATACTTTTCTAGGGGCAAGGATT 57.266 39.130 0.00 0.00 0.00 3.01
787 788 4.404185 ACTTTTCTAGGGGCAAGGATTT 57.596 40.909 0.00 0.00 0.00 2.17
788 789 5.530176 ACTTTTCTAGGGGCAAGGATTTA 57.470 39.130 0.00 0.00 0.00 1.40
789 790 5.899278 ACTTTTCTAGGGGCAAGGATTTAA 58.101 37.500 0.00 0.00 0.00 1.52
790 791 6.503041 ACTTTTCTAGGGGCAAGGATTTAAT 58.497 36.000 0.00 0.00 0.00 1.40
791 792 6.959954 ACTTTTCTAGGGGCAAGGATTTAATT 59.040 34.615 0.00 0.00 0.00 1.40
792 793 8.119891 ACTTTTCTAGGGGCAAGGATTTAATTA 58.880 33.333 0.00 0.00 0.00 1.40
793 794 9.147732 CTTTTCTAGGGGCAAGGATTTAATTAT 57.852 33.333 0.00 0.00 0.00 1.28
794 795 8.706322 TTTCTAGGGGCAAGGATTTAATTATC 57.294 34.615 0.00 0.00 0.00 1.75
795 796 6.790319 TCTAGGGGCAAGGATTTAATTATCC 58.210 40.000 0.00 0.00 43.72 2.59
796 797 4.752063 AGGGGCAAGGATTTAATTATCCC 58.248 43.478 3.95 0.00 44.34 3.85
797 798 3.838317 GGGGCAAGGATTTAATTATCCCC 59.162 47.826 3.95 0.00 44.34 4.81
798 799 4.488770 GGGCAAGGATTTAATTATCCCCA 58.511 43.478 3.95 0.00 44.34 4.96
799 800 4.904853 GGGCAAGGATTTAATTATCCCCAA 59.095 41.667 3.95 0.00 44.34 4.12
800 801 5.368230 GGGCAAGGATTTAATTATCCCCAAA 59.632 40.000 3.95 0.00 44.34 3.28
801 802 6.126623 GGGCAAGGATTTAATTATCCCCAAAA 60.127 38.462 3.95 0.00 44.34 2.44
802 803 7.421265 GGGCAAGGATTTAATTATCCCCAAAAT 60.421 37.037 3.95 0.00 44.34 1.82
803 804 7.998383 GGCAAGGATTTAATTATCCCCAAAATT 59.002 33.333 3.95 0.00 44.34 1.82
804 805 8.839343 GCAAGGATTTAATTATCCCCAAAATTG 58.161 33.333 3.95 3.10 44.34 2.32
805 806 9.904198 CAAGGATTTAATTATCCCCAAAATTGT 57.096 29.630 3.95 0.00 44.34 2.71
810 811 9.830975 ATTTAATTATCCCCAAAATTGTAGTGC 57.169 29.630 0.00 0.00 0.00 4.40
811 812 6.865834 AATTATCCCCAAAATTGTAGTGCA 57.134 33.333 0.00 0.00 0.00 4.57
812 813 5.913137 TTATCCCCAAAATTGTAGTGCAG 57.087 39.130 0.00 0.00 0.00 4.41
813 814 3.517296 TCCCCAAAATTGTAGTGCAGA 57.483 42.857 0.00 0.00 0.00 4.26
814 815 3.838565 TCCCCAAAATTGTAGTGCAGAA 58.161 40.909 0.00 0.00 0.00 3.02
815 816 4.415596 TCCCCAAAATTGTAGTGCAGAAT 58.584 39.130 0.00 0.00 0.00 2.40
816 817 4.837860 TCCCCAAAATTGTAGTGCAGAATT 59.162 37.500 0.00 0.00 31.71 2.17
817 818 5.047377 TCCCCAAAATTGTAGTGCAGAATTC 60.047 40.000 0.00 0.00 29.19 2.17
818 819 5.170748 CCCAAAATTGTAGTGCAGAATTCC 58.829 41.667 0.65 0.00 29.19 3.01
819 820 5.279406 CCCAAAATTGTAGTGCAGAATTCCA 60.279 40.000 0.65 0.00 29.19 3.53
820 821 6.400568 CCAAAATTGTAGTGCAGAATTCCAT 58.599 36.000 0.65 0.00 29.19 3.41
821 822 6.875195 CCAAAATTGTAGTGCAGAATTCCATT 59.125 34.615 0.65 0.00 29.19 3.16
822 823 7.388500 CCAAAATTGTAGTGCAGAATTCCATTT 59.612 33.333 0.65 0.00 29.19 2.32
823 824 8.437742 CAAAATTGTAGTGCAGAATTCCATTTC 58.562 33.333 0.65 0.00 29.19 2.17
824 825 7.472334 AATTGTAGTGCAGAATTCCATTTCT 57.528 32.000 0.65 0.00 36.38 2.52
825 826 6.899393 TTGTAGTGCAGAATTCCATTTCTT 57.101 33.333 0.65 0.00 33.69 2.52
826 827 6.899393 TGTAGTGCAGAATTCCATTTCTTT 57.101 33.333 0.65 0.00 33.69 2.52
827 828 7.288810 TGTAGTGCAGAATTCCATTTCTTTT 57.711 32.000 0.65 0.00 33.69 2.27
828 829 8.402798 TGTAGTGCAGAATTCCATTTCTTTTA 57.597 30.769 0.65 0.00 33.69 1.52
829 830 8.514594 TGTAGTGCAGAATTCCATTTCTTTTAG 58.485 33.333 0.65 0.00 33.69 1.85
830 831 7.765695 AGTGCAGAATTCCATTTCTTTTAGA 57.234 32.000 0.65 0.00 33.69 2.10
831 832 7.824672 AGTGCAGAATTCCATTTCTTTTAGAG 58.175 34.615 0.65 0.00 33.69 2.43
832 833 7.667219 AGTGCAGAATTCCATTTCTTTTAGAGA 59.333 33.333 0.65 0.00 33.69 3.10
833 834 8.299570 GTGCAGAATTCCATTTCTTTTAGAGAA 58.700 33.333 0.65 0.00 42.56 2.87
865 866 8.870160 TGTGAATGTCTTAATTTTGTCTTTGG 57.130 30.769 0.00 0.00 0.00 3.28
866 867 7.925483 TGTGAATGTCTTAATTTTGTCTTTGGG 59.075 33.333 0.00 0.00 0.00 4.12
867 868 6.928492 TGAATGTCTTAATTTTGTCTTTGGGC 59.072 34.615 0.00 0.00 0.00 5.36
868 869 5.208463 TGTCTTAATTTTGTCTTTGGGCC 57.792 39.130 0.00 0.00 0.00 5.80
869 870 4.039852 TGTCTTAATTTTGTCTTTGGGCCC 59.960 41.667 17.59 17.59 0.00 5.80
870 871 4.283467 GTCTTAATTTTGTCTTTGGGCCCT 59.717 41.667 25.70 0.00 0.00 5.19
871 872 5.479027 GTCTTAATTTTGTCTTTGGGCCCTA 59.521 40.000 25.70 14.07 0.00 3.53
872 873 6.154534 GTCTTAATTTTGTCTTTGGGCCCTAT 59.845 38.462 25.70 0.00 0.00 2.57
873 874 6.728632 TCTTAATTTTGTCTTTGGGCCCTATT 59.271 34.615 25.70 6.50 0.00 1.73
874 875 5.420725 AATTTTGTCTTTGGGCCCTATTC 57.579 39.130 25.70 10.30 0.00 1.75
875 876 3.825908 TTTGTCTTTGGGCCCTATTCT 57.174 42.857 25.70 0.00 0.00 2.40
876 877 3.825908 TTGTCTTTGGGCCCTATTCTT 57.174 42.857 25.70 0.00 0.00 2.52
877 878 3.366052 TGTCTTTGGGCCCTATTCTTC 57.634 47.619 25.70 8.09 0.00 2.87
878 879 2.025321 TGTCTTTGGGCCCTATTCTTCC 60.025 50.000 25.70 3.82 0.00 3.46
879 880 2.025321 GTCTTTGGGCCCTATTCTTCCA 60.025 50.000 25.70 0.00 0.00 3.53
880 881 2.652348 TCTTTGGGCCCTATTCTTCCAA 59.348 45.455 25.70 1.57 35.91 3.53
881 882 3.272020 TCTTTGGGCCCTATTCTTCCAAT 59.728 43.478 25.70 0.00 37.34 3.16
882 883 3.312736 TTGGGCCCTATTCTTCCAATC 57.687 47.619 25.70 0.00 33.15 2.67
883 884 1.499007 TGGGCCCTATTCTTCCAATCC 59.501 52.381 25.70 0.00 0.00 3.01
884 885 1.499007 GGGCCCTATTCTTCCAATCCA 59.501 52.381 17.04 0.00 0.00 3.41
885 886 2.489802 GGGCCCTATTCTTCCAATCCAG 60.490 54.545 17.04 0.00 0.00 3.86
886 887 2.175715 GGCCCTATTCTTCCAATCCAGT 59.824 50.000 0.00 0.00 0.00 4.00
887 888 3.481453 GCCCTATTCTTCCAATCCAGTC 58.519 50.000 0.00 0.00 0.00 3.51
888 889 3.137360 GCCCTATTCTTCCAATCCAGTCT 59.863 47.826 0.00 0.00 0.00 3.24
889 890 4.348168 GCCCTATTCTTCCAATCCAGTCTA 59.652 45.833 0.00 0.00 0.00 2.59
900 901 1.419381 TCCAGTCTAGTTGCCACACA 58.581 50.000 0.00 0.00 0.00 3.72
904 905 2.802816 CAGTCTAGTTGCCACACAGTTC 59.197 50.000 0.00 0.00 0.00 3.01
911 912 1.604593 GCCACACAGTTCAGCCCAT 60.605 57.895 0.00 0.00 0.00 4.00
923 924 0.729116 CAGCCCATTTACTGACGCTG 59.271 55.000 0.00 0.00 39.84 5.18
940 941 1.303236 TGGACGGCCCAATCTGTTG 60.303 57.895 3.83 0.00 43.29 3.33
943 944 0.321653 GACGGCCCAATCTGTTGACT 60.322 55.000 0.00 0.00 37.53 3.41
952 953 4.020751 CCCAATCTGTTGACTCAGAGAGAA 60.021 45.833 3.79 0.00 45.70 2.87
956 957 5.598416 TCTGTTGACTCAGAGAGAACAAA 57.402 39.130 3.79 0.00 39.20 2.83
967 968 1.279271 AGAGAACAAATCCCACTCCCG 59.721 52.381 0.00 0.00 0.00 5.14
983 984 1.454111 CCGTCGACTGGGATCCTCT 60.454 63.158 14.70 0.00 0.00 3.69
991 992 1.337118 CTGGGATCCTCTGACCTAGC 58.663 60.000 12.58 0.00 0.00 3.42
993 994 2.109128 CTGGGATCCTCTGACCTAGCTA 59.891 54.545 12.58 0.00 0.00 3.32
1079 1100 3.431725 CGGAAGAAAGGCCGCACC 61.432 66.667 0.00 0.00 41.17 5.01
1096 1117 0.249741 ACCTTGTCTCGTTTCCCGTG 60.250 55.000 0.00 0.00 37.94 4.94
1187 1295 2.927580 GCGTCTCCCGGTCAAGTCA 61.928 63.158 0.00 0.00 36.94 3.41
1213 1321 1.862806 GCTTCAAGTGCGTCTCCAC 59.137 57.895 0.00 0.00 35.98 4.02
1244 1352 2.735772 CCTCATCCACCACCCCGAG 61.736 68.421 0.00 0.00 0.00 4.63
1254 1362 4.572571 ACCCCGAGCACCGCAAAA 62.573 61.111 0.00 0.00 36.84 2.44
1255 1363 3.291383 CCCCGAGCACCGCAAAAA 61.291 61.111 0.00 0.00 36.84 1.94
1256 1364 2.255252 CCCGAGCACCGCAAAAAG 59.745 61.111 0.00 0.00 36.84 2.27
1257 1365 2.429069 CCGAGCACCGCAAAAAGC 60.429 61.111 0.00 0.00 40.87 3.51
1258 1366 2.639286 CGAGCACCGCAAAAAGCT 59.361 55.556 0.00 0.00 42.61 3.74
1259 1367 4.541020 GAGCACCGCAAAAAGCTC 57.459 55.556 0.00 0.00 45.50 4.09
1260 1368 1.081175 GAGCACCGCAAAAAGCTCC 60.081 57.895 0.00 0.00 45.79 4.70
1261 1369 2.049156 GCACCGCAAAAAGCTCCC 60.049 61.111 0.00 0.00 42.61 4.30
1262 1370 2.650778 CACCGCAAAAAGCTCCCC 59.349 61.111 0.00 0.00 42.61 4.81
1263 1371 2.600470 ACCGCAAAAAGCTCCCCC 60.600 61.111 0.00 0.00 42.61 5.40
1264 1372 3.747976 CCGCAAAAAGCTCCCCCG 61.748 66.667 0.00 0.00 42.61 5.73
1265 1373 2.671619 CGCAAAAAGCTCCCCCGA 60.672 61.111 0.00 0.00 42.61 5.14
1266 1374 2.690778 CGCAAAAAGCTCCCCCGAG 61.691 63.158 0.00 0.00 42.61 4.63
1527 1855 0.035534 TGTGTAATCCTGCCACGCAT 60.036 50.000 0.00 0.00 38.13 4.73
1632 1966 5.790495 GTCGCATTTCTATGTGTTTGAGTTC 59.210 40.000 0.00 0.00 41.85 3.01
1634 1968 5.791974 CGCATTTCTATGTGTTTGAGTTCAG 59.208 40.000 0.00 0.00 37.47 3.02
1646 1980 3.385193 TGAGTTCAGAAATGAGCACGA 57.615 42.857 0.00 0.00 0.00 4.35
1647 1981 3.059884 TGAGTTCAGAAATGAGCACGAC 58.940 45.455 0.00 0.00 0.00 4.34
1648 1982 2.413453 GAGTTCAGAAATGAGCACGACC 59.587 50.000 0.00 0.00 0.00 4.79
1682 2034 2.350895 CATTGTCGGGGTGGCAGA 59.649 61.111 0.00 0.00 0.00 4.26
1737 2089 4.268359 AGGAGAAGAAATGGAATGCAGAC 58.732 43.478 0.00 0.00 0.00 3.51
1864 2231 1.715931 AGGGGGAAACATGGATGAACA 59.284 47.619 0.00 0.00 0.00 3.18
1878 2245 3.629398 GGATGAACATTGATGTCCCTGAC 59.371 47.826 0.00 0.00 40.80 3.51
1879 2246 2.698803 TGAACATTGATGTCCCTGACG 58.301 47.619 0.00 0.00 40.80 4.35
1880 2247 1.398390 GAACATTGATGTCCCTGACGC 59.602 52.381 0.00 0.00 40.80 5.19
1881 2248 0.615331 ACATTGATGTCCCTGACGCT 59.385 50.000 0.00 0.00 35.87 5.07
1882 2249 1.012086 CATTGATGTCCCTGACGCTG 58.988 55.000 0.00 0.00 34.95 5.18
1883 2250 0.904649 ATTGATGTCCCTGACGCTGA 59.095 50.000 0.00 0.00 34.95 4.26
2015 2391 5.190528 AGGACTATCAAAGCAGAGAATGGAA 59.809 40.000 0.00 0.00 0.00 3.53
2065 2441 6.126863 ACATACTTGGAGAAACAGATTCCA 57.873 37.500 0.00 0.00 38.94 3.53
2208 7010 2.360801 GCTGATCTCTGGTCCTGTAGAC 59.639 54.545 0.00 0.00 45.51 2.59
2316 7122 5.014123 TGGTGTCCATAAGAAGTGGATCTTT 59.986 40.000 0.00 0.00 46.68 2.52
2363 7190 1.873698 TGGAACAGTTGGCTTCGTAC 58.126 50.000 0.00 0.00 0.00 3.67
2382 7209 3.788227 ACTGCCTACTTGAATTGGTCA 57.212 42.857 0.00 0.00 0.00 4.02
2535 7374 4.285517 TGCATACCAATGGTTTTGGACAAT 59.714 37.500 11.41 0.00 42.06 2.71
2564 7403 4.441792 CTCCATGTATTCGGTCAACATCA 58.558 43.478 0.00 0.00 31.60 3.07
2572 7411 1.565156 CGGTCAACATCACGTGGTGG 61.565 60.000 30.97 15.50 45.88 4.61
2632 7471 2.061509 TCAATGGTCATCATGCAGGG 57.938 50.000 0.00 0.00 35.99 4.45
2652 7491 6.207417 GCAGGGCTTTATATCTTCTATTTGCA 59.793 38.462 0.00 0.00 0.00 4.08
2681 7520 7.762615 TGTGGGAAGATAAGTATTTTACTGACG 59.237 37.037 0.00 0.00 39.39 4.35
2696 7535 8.659925 TTTTACTGACGGTGATTTAGTAAACA 57.340 30.769 0.00 0.00 41.09 2.83
2699 7538 6.951643 ACTGACGGTGATTTAGTAAACAAAC 58.048 36.000 0.00 0.00 0.00 2.93
2857 7697 3.782656 TTTGAAGTACCCCAGAAGACC 57.217 47.619 0.00 0.00 0.00 3.85
2914 7754 6.113411 TCTGGTAGATAAGCCTAAAAACAGC 58.887 40.000 0.00 0.00 0.00 4.40
2922 7762 7.670140 AGATAAGCCTAAAAACAGCCTTAACTT 59.330 33.333 0.00 0.00 0.00 2.66
2926 7766 7.827701 AGCCTAAAAACAGCCTTAACTTAATC 58.172 34.615 0.00 0.00 0.00 1.75
2932 7772 5.629079 ACAGCCTTAACTTAATCAGCAAC 57.371 39.130 0.00 0.00 0.00 4.17
2970 7810 5.173774 TGCTAGTCTTGCTTCTTGTTTTG 57.826 39.130 7.78 0.00 0.00 2.44
2979 7819 7.535599 GTCTTGCTTCTTGTTTTGCTAAGATAC 59.464 37.037 0.00 0.00 33.34 2.24
2982 7822 6.072508 TGCTTCTTGTTTTGCTAAGATACCTG 60.073 38.462 0.00 0.00 33.34 4.00
2983 7823 6.072452 GCTTCTTGTTTTGCTAAGATACCTGT 60.072 38.462 0.00 0.00 33.34 4.00
2984 7824 6.801539 TCTTGTTTTGCTAAGATACCTGTG 57.198 37.500 0.00 0.00 0.00 3.66
2985 7825 5.181245 TCTTGTTTTGCTAAGATACCTGTGC 59.819 40.000 0.00 0.00 0.00 4.57
2986 7826 4.393834 TGTTTTGCTAAGATACCTGTGCA 58.606 39.130 0.00 0.00 32.35 4.57
2987 7827 4.455533 TGTTTTGCTAAGATACCTGTGCAG 59.544 41.667 0.00 0.00 34.56 4.41
2988 7828 2.315925 TGCTAAGATACCTGTGCAGC 57.684 50.000 0.00 0.00 31.23 5.25
3005 7875 5.814783 GTGCAGCTCACATCCTATAAAAAG 58.185 41.667 10.30 0.00 44.98 2.27
3007 7877 4.276926 GCAGCTCACATCCTATAAAAAGGG 59.723 45.833 0.00 0.00 37.24 3.95
3009 7879 3.570125 GCTCACATCCTATAAAAAGGGGC 59.430 47.826 0.00 0.00 37.24 5.80
3105 7977 5.787380 TCCATATGGAGATCGATTGTTCAG 58.213 41.667 20.98 0.00 39.78 3.02
3154 8028 8.557592 TGCATACATATACGTAGCTACTTACT 57.442 34.615 21.20 9.21 0.00 2.24
3155 8029 9.006839 TGCATACATATACGTAGCTACTTACTT 57.993 33.333 21.20 5.65 0.00 2.24
3168 8042 7.948034 AGCTACTTACTTCTACAAGATGACT 57.052 36.000 0.00 0.00 33.34 3.41
3261 8136 6.351371 CCAAGAACTAAGGCTCTAGATCAACA 60.351 42.308 0.00 0.00 0.00 3.33
3264 8139 5.446143 ACTAAGGCTCTAGATCAACATCG 57.554 43.478 0.00 0.00 33.75 3.84
3303 8178 3.678056 ACTGGAAATGACTGCGAGTAA 57.322 42.857 0.00 0.00 0.00 2.24
3321 8196 3.877508 AGTAACTCCAAGTTGCACTGAAC 59.122 43.478 9.95 0.00 42.23 3.18
3359 8234 4.962693 GCTGTTGCTAACTGTAAGTGATG 58.037 43.478 0.00 0.00 41.12 3.07
3360 8235 4.670221 GCTGTTGCTAACTGTAAGTGATGC 60.670 45.833 0.00 0.00 41.12 3.91
3361 8236 7.042119 GCTGTTGCTAACTGTAAGTGATGCA 62.042 44.000 0.00 0.00 42.43 3.96
3362 8237 8.734103 GCTGTTGCTAACTGTAAGTGATGCAG 62.734 46.154 0.00 0.00 43.91 4.41
3369 8244 4.590400 CTGTAAGTGATGCAGTGCTTAC 57.410 45.455 17.60 20.70 41.91 2.34
3371 8246 2.455674 AAGTGATGCAGTGCTTACGA 57.544 45.000 17.60 0.00 0.00 3.43
3372 8247 2.680312 AGTGATGCAGTGCTTACGAT 57.320 45.000 17.60 0.00 0.00 3.73
3374 8249 1.328680 GTGATGCAGTGCTTACGATGG 59.671 52.381 17.60 0.00 0.00 3.51
3375 8250 0.940126 GATGCAGTGCTTACGATGGG 59.060 55.000 17.60 0.00 0.00 4.00
3376 8251 1.097547 ATGCAGTGCTTACGATGGGC 61.098 55.000 17.60 0.00 0.00 5.36
3392 8267 3.379445 GCGTCGACCAGGGGAGAA 61.379 66.667 10.58 0.00 0.00 2.87
3393 8268 2.885861 CGTCGACCAGGGGAGAAG 59.114 66.667 10.58 0.00 0.00 2.85
3395 8270 2.683933 TCGACCAGGGGAGAAGGC 60.684 66.667 0.00 0.00 0.00 4.35
3398 8273 1.684734 GACCAGGGGAGAAGGCGTA 60.685 63.158 0.00 0.00 0.00 4.42
3399 8274 1.229400 ACCAGGGGAGAAGGCGTAA 60.229 57.895 0.00 0.00 0.00 3.18
3400 8275 0.838987 ACCAGGGGAGAAGGCGTAAA 60.839 55.000 0.00 0.00 0.00 2.01
3402 8277 0.323629 CAGGGGAGAAGGCGTAAACA 59.676 55.000 0.00 0.00 0.00 2.83
3403 8278 1.061546 AGGGGAGAAGGCGTAAACAA 58.938 50.000 0.00 0.00 0.00 2.83
3404 8279 1.003233 AGGGGAGAAGGCGTAAACAAG 59.997 52.381 0.00 0.00 0.00 3.16
3405 8280 0.803117 GGGAGAAGGCGTAAACAAGC 59.197 55.000 0.00 0.00 0.00 4.01
3406 8281 1.519408 GGAGAAGGCGTAAACAAGCA 58.481 50.000 0.00 0.00 34.54 3.91
3407 8282 1.877443 GGAGAAGGCGTAAACAAGCAA 59.123 47.619 0.00 0.00 34.54 3.91
3408 8283 2.488153 GGAGAAGGCGTAAACAAGCAAT 59.512 45.455 0.00 0.00 34.54 3.56
3409 8284 3.492313 GAGAAGGCGTAAACAAGCAATG 58.508 45.455 0.00 0.00 34.54 2.82
3410 8285 3.146066 AGAAGGCGTAAACAAGCAATGA 58.854 40.909 0.00 0.00 34.54 2.57
3411 8286 3.568007 AGAAGGCGTAAACAAGCAATGAA 59.432 39.130 0.00 0.00 34.54 2.57
3412 8287 3.559238 AGGCGTAAACAAGCAATGAAG 57.441 42.857 0.00 0.00 34.54 3.02
3414 8289 3.568007 AGGCGTAAACAAGCAATGAAGAA 59.432 39.130 0.00 0.00 34.54 2.52
3415 8290 3.914364 GGCGTAAACAAGCAATGAAGAAG 59.086 43.478 0.00 0.00 34.54 2.85
3416 8291 4.320202 GGCGTAAACAAGCAATGAAGAAGA 60.320 41.667 0.00 0.00 34.54 2.87
3417 8292 5.212194 GCGTAAACAAGCAATGAAGAAGAA 58.788 37.500 0.00 0.00 0.00 2.52
3418 8293 5.340667 GCGTAAACAAGCAATGAAGAAGAAG 59.659 40.000 0.00 0.00 0.00 2.85
3419 8294 6.430451 CGTAAACAAGCAATGAAGAAGAAGT 58.570 36.000 0.00 0.00 0.00 3.01
3421 8296 8.067784 CGTAAACAAGCAATGAAGAAGAAGTAA 58.932 33.333 0.00 0.00 0.00 2.24
3422 8297 9.170584 GTAAACAAGCAATGAAGAAGAAGTAAC 57.829 33.333 0.00 0.00 0.00 2.50
3423 8298 6.319141 ACAAGCAATGAAGAAGAAGTAACC 57.681 37.500 0.00 0.00 0.00 2.85
3424 8299 5.827797 ACAAGCAATGAAGAAGAAGTAACCA 59.172 36.000 0.00 0.00 0.00 3.67
3425 8300 6.491403 ACAAGCAATGAAGAAGAAGTAACCAT 59.509 34.615 0.00 0.00 0.00 3.55
3433 8308 0.108329 AGAAGTAACCATGACGCGGG 60.108 55.000 12.47 3.90 0.00 6.13
3434 8309 0.108520 GAAGTAACCATGACGCGGGA 60.109 55.000 12.47 0.00 0.00 5.14
3436 8311 0.968901 AGTAACCATGACGCGGGAGA 60.969 55.000 12.47 0.00 0.00 3.71
3437 8312 0.527817 GTAACCATGACGCGGGAGAG 60.528 60.000 12.47 0.00 0.00 3.20
3439 8314 1.827399 AACCATGACGCGGGAGAGTT 61.827 55.000 12.47 5.61 44.97 3.01
3440 8315 1.079127 CCATGACGCGGGAGAGTTT 60.079 57.895 12.47 0.00 44.97 2.66
3442 8317 1.404986 CCATGACGCGGGAGAGTTTAA 60.405 52.381 12.47 0.00 44.97 1.52
3443 8318 2.343101 CATGACGCGGGAGAGTTTAAA 58.657 47.619 12.47 0.00 44.97 1.52
3447 8322 1.083489 CGCGGGAGAGTTTAAATGCA 58.917 50.000 0.00 0.00 0.00 3.96
3448 8323 1.670811 CGCGGGAGAGTTTAAATGCAT 59.329 47.619 0.00 0.00 0.00 3.96
3449 8324 2.097466 CGCGGGAGAGTTTAAATGCATT 59.903 45.455 5.99 5.99 0.00 3.56
3450 8325 3.438360 GCGGGAGAGTTTAAATGCATTG 58.562 45.455 13.82 0.00 0.00 2.82
3453 8328 4.396166 CGGGAGAGTTTAAATGCATTGAGT 59.604 41.667 13.82 5.28 0.00 3.41
3454 8329 5.644644 GGGAGAGTTTAAATGCATTGAGTG 58.355 41.667 13.82 0.00 0.00 3.51
3455 8330 5.393461 GGGAGAGTTTAAATGCATTGAGTGG 60.393 44.000 13.82 0.00 0.00 4.00
3456 8331 5.183904 GGAGAGTTTAAATGCATTGAGTGGT 59.816 40.000 13.82 0.00 0.00 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 9.463443 GTAGTGCAAAACAACAGAAAATATTCT 57.537 29.630 0.00 0.00 46.91 2.40
4 5 9.243637 TGTAGTGCAAAACAACAGAAAATATTC 57.756 29.630 0.05 0.00 35.70 1.75
5 6 9.762933 ATGTAGTGCAAAACAACAGAAAATATT 57.237 25.926 6.48 0.00 0.00 1.28
6 7 9.762933 AATGTAGTGCAAAACAACAGAAAATAT 57.237 25.926 6.48 0.00 0.00 1.28
8 9 9.762933 ATAATGTAGTGCAAAACAACAGAAAAT 57.237 25.926 6.48 0.00 0.00 1.82
9 10 9.593134 AATAATGTAGTGCAAAACAACAGAAAA 57.407 25.926 6.48 0.00 0.00 2.29
10 11 9.593134 AAATAATGTAGTGCAAAACAACAGAAA 57.407 25.926 6.48 0.00 0.00 2.52
11 12 9.593134 AAAATAATGTAGTGCAAAACAACAGAA 57.407 25.926 6.48 0.00 0.00 3.02
12 13 9.593134 AAAAATAATGTAGTGCAAAACAACAGA 57.407 25.926 6.48 0.00 0.00 3.41
13 14 9.635632 CAAAAATAATGTAGTGCAAAACAACAG 57.364 29.630 6.48 0.00 0.00 3.16
14 15 8.119226 GCAAAAATAATGTAGTGCAAAACAACA 58.881 29.630 6.48 0.00 32.29 3.33
15 16 8.119226 TGCAAAAATAATGTAGTGCAAAACAAC 58.881 29.630 6.48 0.00 38.93 3.32
16 17 8.201554 TGCAAAAATAATGTAGTGCAAAACAA 57.798 26.923 6.48 0.00 38.93 2.83
17 18 7.042187 CCTGCAAAAATAATGTAGTGCAAAACA 60.042 33.333 4.96 4.96 41.11 2.83
18 19 7.290118 CCTGCAAAAATAATGTAGTGCAAAAC 58.710 34.615 0.00 0.00 41.11 2.43
19 20 6.426328 CCCTGCAAAAATAATGTAGTGCAAAA 59.574 34.615 0.00 0.00 41.11 2.44
20 21 5.931146 CCCTGCAAAAATAATGTAGTGCAAA 59.069 36.000 0.00 0.00 41.11 3.68
21 22 5.244851 TCCCTGCAAAAATAATGTAGTGCAA 59.755 36.000 0.00 0.00 41.11 4.08
22 23 4.769488 TCCCTGCAAAAATAATGTAGTGCA 59.231 37.500 0.00 0.00 39.53 4.57
23 24 5.323371 TCCCTGCAAAAATAATGTAGTGC 57.677 39.130 0.00 0.00 0.00 4.40
49 50 3.495001 TGTCGTGCACATGTATCGAAAAA 59.505 39.130 18.64 7.02 32.56 1.94
50 51 3.060602 TGTCGTGCACATGTATCGAAAA 58.939 40.909 18.64 8.81 32.56 2.29
51 52 2.678324 TGTCGTGCACATGTATCGAAA 58.322 42.857 18.64 11.24 32.56 3.46
52 53 2.355717 TGTCGTGCACATGTATCGAA 57.644 45.000 18.64 8.16 32.56 3.71
53 54 2.459934 GATGTCGTGCACATGTATCGA 58.540 47.619 18.64 12.74 46.53 3.59
54 55 1.187921 CGATGTCGTGCACATGTATCG 59.812 52.381 18.64 19.83 46.53 2.92
55 56 1.522676 CCGATGTCGTGCACATGTATC 59.477 52.381 18.64 12.89 46.53 2.24
56 57 1.134818 ACCGATGTCGTGCACATGTAT 60.135 47.619 18.64 5.12 46.53 2.29
57 58 0.245266 ACCGATGTCGTGCACATGTA 59.755 50.000 18.64 0.00 46.53 2.29
58 59 1.005037 ACCGATGTCGTGCACATGT 60.005 52.632 18.64 0.00 46.53 3.21
59 60 0.737367 AGACCGATGTCGTGCACATG 60.737 55.000 18.64 0.87 46.53 3.21
61 62 0.170339 CTAGACCGATGTCGTGCACA 59.830 55.000 18.64 0.81 46.51 4.57
62 63 1.140407 GCTAGACCGATGTCGTGCAC 61.140 60.000 6.82 6.82 46.51 4.57
63 64 1.138883 GCTAGACCGATGTCGTGCA 59.861 57.895 0.00 0.00 46.51 4.57
64 65 1.589196 GGCTAGACCGATGTCGTGC 60.589 63.158 0.00 0.00 46.51 5.34
65 66 4.711980 GGCTAGACCGATGTCGTG 57.288 61.111 0.00 0.00 46.51 4.35
74 75 4.253257 CGAGACGCCGGCTAGACC 62.253 72.222 26.68 8.71 0.00 3.85
94 95 3.998672 TCGGCCAACCTCGGTGAC 61.999 66.667 2.24 0.00 0.00 3.67
95 96 3.998672 GTCGGCCAACCTCGGTGA 61.999 66.667 2.24 0.00 0.00 4.02
102 103 2.668550 GACACAGGTCGGCCAACC 60.669 66.667 9.71 4.01 39.80 3.77
110 111 3.768632 GCGATGTCGACACAGGTC 58.231 61.111 22.71 13.57 43.02 3.85
127 128 4.012895 GACAGTGTTGTGGCGCGG 62.013 66.667 8.83 0.00 37.76 6.46
128 129 2.606961 ATGACAGTGTTGTGGCGCG 61.607 57.895 0.00 0.00 37.76 6.86
129 130 1.081906 CATGACAGTGTTGTGGCGC 60.082 57.895 0.00 0.00 37.76 6.53
130 131 1.081906 GCATGACAGTGTTGTGGCG 60.082 57.895 0.00 0.00 37.76 5.69
131 132 1.286880 GGCATGACAGTGTTGTGGC 59.713 57.895 15.97 15.97 37.76 5.01
132 133 1.200716 GATGGCATGACAGTGTTGTGG 59.799 52.381 7.63 0.00 37.76 4.17
133 134 1.135888 CGATGGCATGACAGTGTTGTG 60.136 52.381 7.63 0.60 37.76 3.33
134 135 1.159285 CGATGGCATGACAGTGTTGT 58.841 50.000 7.63 0.00 41.18 3.32
135 136 1.395954 CTCGATGGCATGACAGTGTTG 59.604 52.381 7.63 0.00 0.00 3.33
136 137 1.730501 CTCGATGGCATGACAGTGTT 58.269 50.000 7.63 0.00 0.00 3.32
137 138 0.742281 GCTCGATGGCATGACAGTGT 60.742 55.000 7.63 0.00 0.00 3.55
138 139 1.434622 GGCTCGATGGCATGACAGTG 61.435 60.000 7.63 1.23 41.37 3.66
139 140 1.153289 GGCTCGATGGCATGACAGT 60.153 57.895 7.63 0.00 41.37 3.55
140 141 2.242572 CGGCTCGATGGCATGACAG 61.243 63.158 7.63 0.00 41.89 3.51
141 142 2.202919 CGGCTCGATGGCATGACA 60.203 61.111 2.18 2.18 41.89 3.58
142 143 2.106938 TCGGCTCGATGGCATGAC 59.893 61.111 3.81 0.00 41.89 3.06
143 144 2.106938 GTCGGCTCGATGGCATGA 59.893 61.111 3.81 1.89 41.89 3.07
144 145 2.969238 GGTCGGCTCGATGGCATG 60.969 66.667 3.81 0.00 41.89 4.06
145 146 3.157217 GAGGTCGGCTCGATGGCAT 62.157 63.158 0.00 0.00 41.89 4.40
146 147 3.838271 GAGGTCGGCTCGATGGCA 61.838 66.667 0.00 0.00 41.89 4.92
147 148 4.933064 CGAGGTCGGCTCGATGGC 62.933 72.222 0.00 0.00 46.06 4.40
165 166 1.312815 AAGAAATATGGCCTGAGCGC 58.687 50.000 3.32 0.00 41.24 5.92
166 167 5.695851 ATTAAAGAAATATGGCCTGAGCG 57.304 39.130 3.32 0.00 41.24 5.03
167 168 8.171164 AGTAATTAAAGAAATATGGCCTGAGC 57.829 34.615 3.32 0.00 38.76 4.26
244 245 8.779354 ACAGTGCAAACCAAAAGTAATAAAAA 57.221 26.923 0.00 0.00 0.00 1.94
245 246 8.779354 AACAGTGCAAACCAAAAGTAATAAAA 57.221 26.923 0.00 0.00 0.00 1.52
246 247 8.779354 AAACAGTGCAAACCAAAAGTAATAAA 57.221 26.923 0.00 0.00 0.00 1.40
247 248 8.035394 TGAAACAGTGCAAACCAAAAGTAATAA 58.965 29.630 0.00 0.00 0.00 1.40
248 249 7.548097 TGAAACAGTGCAAACCAAAAGTAATA 58.452 30.769 0.00 0.00 0.00 0.98
249 250 6.402222 TGAAACAGTGCAAACCAAAAGTAAT 58.598 32.000 0.00 0.00 0.00 1.89
250 251 5.784177 TGAAACAGTGCAAACCAAAAGTAA 58.216 33.333 0.00 0.00 0.00 2.24
251 252 5.392767 TGAAACAGTGCAAACCAAAAGTA 57.607 34.783 0.00 0.00 0.00 2.24
252 253 4.264460 TGAAACAGTGCAAACCAAAAGT 57.736 36.364 0.00 0.00 0.00 2.66
253 254 4.630940 ACATGAAACAGTGCAAACCAAAAG 59.369 37.500 0.00 0.00 0.00 2.27
254 255 4.391216 CACATGAAACAGTGCAAACCAAAA 59.609 37.500 0.00 0.00 0.00 2.44
255 256 3.931468 CACATGAAACAGTGCAAACCAAA 59.069 39.130 0.00 0.00 0.00 3.28
256 257 3.519579 CACATGAAACAGTGCAAACCAA 58.480 40.909 0.00 0.00 0.00 3.67
257 258 3.162202 CACATGAAACAGTGCAAACCA 57.838 42.857 0.00 0.00 0.00 3.67
264 265 1.677576 ACCTGTGCACATGAAACAGTG 59.322 47.619 26.20 9.29 39.75 3.66
265 266 2.057137 ACCTGTGCACATGAAACAGT 57.943 45.000 26.20 10.30 39.75 3.55
266 267 4.566545 TTTACCTGTGCACATGAAACAG 57.433 40.909 26.20 10.71 40.81 3.16
267 268 5.068329 TCAATTTACCTGTGCACATGAAACA 59.932 36.000 26.20 8.00 0.00 2.83
268 269 5.402270 GTCAATTTACCTGTGCACATGAAAC 59.598 40.000 26.20 9.21 0.00 2.78
269 270 5.527951 GTCAATTTACCTGTGCACATGAAA 58.472 37.500 26.20 21.53 0.00 2.69
270 271 4.320129 CGTCAATTTACCTGTGCACATGAA 60.320 41.667 26.20 13.71 0.00 2.57
271 272 3.188254 CGTCAATTTACCTGTGCACATGA 59.812 43.478 26.20 18.90 0.00 3.07
272 273 3.491356 CGTCAATTTACCTGTGCACATG 58.509 45.455 22.00 20.38 0.00 3.21
273 274 2.095263 GCGTCAATTTACCTGTGCACAT 60.095 45.455 22.00 9.33 0.00 3.21
274 275 1.265635 GCGTCAATTTACCTGTGCACA 59.734 47.619 20.37 20.37 0.00 4.57
275 276 1.401018 GGCGTCAATTTACCTGTGCAC 60.401 52.381 10.75 10.75 0.00 4.57
276 277 0.878416 GGCGTCAATTTACCTGTGCA 59.122 50.000 0.00 0.00 0.00 4.57
277 278 0.179200 CGGCGTCAATTTACCTGTGC 60.179 55.000 0.00 0.00 0.00 4.57
278 279 1.127951 GTCGGCGTCAATTTACCTGTG 59.872 52.381 6.85 0.00 0.00 3.66
279 280 1.435577 GTCGGCGTCAATTTACCTGT 58.564 50.000 6.85 0.00 0.00 4.00
280 281 0.725117 GGTCGGCGTCAATTTACCTG 59.275 55.000 6.85 0.00 0.00 4.00
281 282 0.611714 AGGTCGGCGTCAATTTACCT 59.388 50.000 6.85 7.66 32.52 3.08
282 283 0.725117 CAGGTCGGCGTCAATTTACC 59.275 55.000 6.85 5.02 0.00 2.85
283 284 1.435577 ACAGGTCGGCGTCAATTTAC 58.564 50.000 6.85 0.00 0.00 2.01
284 285 2.172851 AACAGGTCGGCGTCAATTTA 57.827 45.000 6.85 0.00 0.00 1.40
285 286 1.265905 GAAACAGGTCGGCGTCAATTT 59.734 47.619 6.85 3.05 0.00 1.82
286 287 0.872388 GAAACAGGTCGGCGTCAATT 59.128 50.000 6.85 0.00 0.00 2.32
287 288 1.289109 CGAAACAGGTCGGCGTCAAT 61.289 55.000 6.85 0.00 37.37 2.57
288 289 1.952133 CGAAACAGGTCGGCGTCAA 60.952 57.895 6.85 0.00 37.37 3.18
289 290 2.355363 CGAAACAGGTCGGCGTCA 60.355 61.111 6.85 0.00 37.37 4.35
290 291 2.049802 TCGAAACAGGTCGGCGTC 60.050 61.111 6.85 0.00 41.43 5.19
291 292 2.355481 GTCGAAACAGGTCGGCGT 60.355 61.111 6.85 0.00 41.43 5.68
293 294 2.654912 CGTGTCGAAACAGGTCGGC 61.655 63.158 6.53 0.00 45.77 5.54
294 295 3.534160 CGTGTCGAAACAGGTCGG 58.466 61.111 6.53 0.00 41.43 4.79
333 334 2.203070 CAGGTAGGCGGGTGATGC 60.203 66.667 0.00 0.00 0.00 3.91
334 335 2.203070 GCAGGTAGGCGGGTGATG 60.203 66.667 0.00 0.00 0.00 3.07
335 336 2.365635 AGCAGGTAGGCGGGTGAT 60.366 61.111 0.00 0.00 39.27 3.06
336 337 3.075005 GAGCAGGTAGGCGGGTGA 61.075 66.667 0.00 0.00 39.27 4.02
337 338 4.162690 GGAGCAGGTAGGCGGGTG 62.163 72.222 0.00 0.00 39.27 4.61
340 341 4.208686 GACGGAGCAGGTAGGCGG 62.209 72.222 0.00 0.00 39.27 6.13
341 342 3.449227 TGACGGAGCAGGTAGGCG 61.449 66.667 0.00 0.00 39.27 5.52
342 343 2.184579 GTGACGGAGCAGGTAGGC 59.815 66.667 0.00 0.00 0.00 3.93
343 344 1.668101 GAGGTGACGGAGCAGGTAGG 61.668 65.000 0.00 0.00 0.00 3.18
344 345 1.810532 GAGGTGACGGAGCAGGTAG 59.189 63.158 0.00 0.00 0.00 3.18
345 346 2.044555 CGAGGTGACGGAGCAGGTA 61.045 63.158 0.00 0.00 0.00 3.08
346 347 3.374402 CGAGGTGACGGAGCAGGT 61.374 66.667 0.00 0.00 0.00 4.00
354 355 0.736325 CCAGTTTAGCCGAGGTGACG 60.736 60.000 0.00 0.00 0.00 4.35
355 356 0.391263 CCCAGTTTAGCCGAGGTGAC 60.391 60.000 0.00 0.00 0.00 3.67
356 357 0.543410 TCCCAGTTTAGCCGAGGTGA 60.543 55.000 0.00 0.00 0.00 4.02
357 358 0.108138 CTCCCAGTTTAGCCGAGGTG 60.108 60.000 0.00 0.00 0.00 4.00
358 359 1.900545 GCTCCCAGTTTAGCCGAGGT 61.901 60.000 0.00 0.00 32.40 3.85
359 360 1.153349 GCTCCCAGTTTAGCCGAGG 60.153 63.158 0.00 0.00 32.40 4.63
360 361 0.250513 AAGCTCCCAGTTTAGCCGAG 59.749 55.000 0.00 0.00 39.64 4.63
361 362 0.249398 GAAGCTCCCAGTTTAGCCGA 59.751 55.000 0.00 0.00 39.64 5.54
362 363 0.036388 TGAAGCTCCCAGTTTAGCCG 60.036 55.000 0.00 0.00 39.64 5.52
363 364 1.454201 GTGAAGCTCCCAGTTTAGCC 58.546 55.000 0.00 0.00 39.64 3.93
364 365 1.003696 AGGTGAAGCTCCCAGTTTAGC 59.996 52.381 0.00 0.00 39.08 3.09
365 366 2.569404 AGAGGTGAAGCTCCCAGTTTAG 59.431 50.000 5.91 0.00 0.00 1.85
366 367 2.567615 GAGAGGTGAAGCTCCCAGTTTA 59.432 50.000 5.91 0.00 0.00 2.01
367 368 1.349357 GAGAGGTGAAGCTCCCAGTTT 59.651 52.381 5.91 0.00 0.00 2.66
368 369 0.980423 GAGAGGTGAAGCTCCCAGTT 59.020 55.000 5.91 0.00 0.00 3.16
369 370 0.907230 GGAGAGGTGAAGCTCCCAGT 60.907 60.000 5.91 0.00 43.91 4.00
370 371 1.904032 GGAGAGGTGAAGCTCCCAG 59.096 63.158 5.91 0.00 43.91 4.45
371 372 4.136978 GGAGAGGTGAAGCTCCCA 57.863 61.111 5.91 0.00 43.91 4.37
374 375 0.390998 GCTGTGGAGAGGTGAAGCTC 60.391 60.000 1.20 1.20 0.00 4.09
375 376 1.676384 GCTGTGGAGAGGTGAAGCT 59.324 57.895 0.00 0.00 0.00 3.74
376 377 1.739562 CGCTGTGGAGAGGTGAAGC 60.740 63.158 0.00 0.00 0.00 3.86
377 378 1.079543 CCGCTGTGGAGAGGTGAAG 60.080 63.158 0.00 0.00 42.00 3.02
378 379 3.059982 CCGCTGTGGAGAGGTGAA 58.940 61.111 0.00 0.00 42.00 3.18
382 383 3.374402 ACGACCGCTGTGGAGAGG 61.374 66.667 15.34 2.43 44.52 3.69
383 384 2.126307 CACGACCGCTGTGGAGAG 60.126 66.667 15.34 7.01 42.00 3.20
384 385 4.357947 GCACGACCGCTGTGGAGA 62.358 66.667 15.34 0.00 42.00 3.71
385 386 4.363990 AGCACGACCGCTGTGGAG 62.364 66.667 15.34 9.87 41.85 3.86
394 395 4.961511 TGGCGACACAGCACGACC 62.962 66.667 0.00 0.00 39.27 4.79
416 417 4.803426 CGGACAGCTCGGCACTCC 62.803 72.222 0.00 1.44 0.00 3.85
429 430 2.791501 TTTAAGGTGGCCGAGCGGAC 62.792 60.000 13.94 11.08 45.60 4.79
430 431 2.114488 TTTTAAGGTGGCCGAGCGGA 62.114 55.000 13.94 0.00 37.50 5.54
431 432 1.238625 TTTTTAAGGTGGCCGAGCGG 61.239 55.000 4.20 4.20 38.57 5.52
432 433 0.168128 CTTTTTAAGGTGGCCGAGCG 59.832 55.000 0.00 0.00 0.00 5.03
433 434 0.526211 CCTTTTTAAGGTGGCCGAGC 59.474 55.000 0.00 0.00 43.95 5.03
443 444 5.631929 GGGTGACGTAAAATGCCTTTTTAAG 59.368 40.000 4.99 8.65 40.53 1.85
444 445 5.530712 GGGTGACGTAAAATGCCTTTTTAA 58.469 37.500 4.99 0.00 40.53 1.52
445 446 4.320348 CGGGTGACGTAAAATGCCTTTTTA 60.320 41.667 4.99 1.79 38.47 1.52
446 447 3.551250 CGGGTGACGTAAAATGCCTTTTT 60.551 43.478 4.99 2.72 40.59 1.94
447 448 2.030628 CGGGTGACGTAAAATGCCTTTT 60.031 45.455 5.05 5.05 38.17 2.27
448 449 1.538075 CGGGTGACGTAAAATGCCTTT 59.462 47.619 0.00 0.00 37.93 3.11
449 450 1.161843 CGGGTGACGTAAAATGCCTT 58.838 50.000 0.00 0.00 37.93 4.35
450 451 0.322322 TCGGGTGACGTAAAATGCCT 59.678 50.000 0.00 0.00 44.69 4.75
451 452 1.158434 TTCGGGTGACGTAAAATGCC 58.842 50.000 0.00 0.00 44.69 4.40
452 453 2.846693 CTTTCGGGTGACGTAAAATGC 58.153 47.619 0.00 0.00 44.69 3.56
453 454 2.413634 GGCTTTCGGGTGACGTAAAATG 60.414 50.000 0.00 0.00 44.69 2.32
454 455 1.808343 GGCTTTCGGGTGACGTAAAAT 59.192 47.619 0.00 0.00 44.69 1.82
455 456 1.228533 GGCTTTCGGGTGACGTAAAA 58.771 50.000 0.00 0.00 44.69 1.52
456 457 0.603439 GGGCTTTCGGGTGACGTAAA 60.603 55.000 0.00 0.00 44.69 2.01
457 458 1.004679 GGGCTTTCGGGTGACGTAA 60.005 57.895 0.00 0.00 44.69 3.18
458 459 1.546589 ATGGGCTTTCGGGTGACGTA 61.547 55.000 0.00 0.00 44.69 3.57
459 460 2.406002 AATGGGCTTTCGGGTGACGT 62.406 55.000 0.00 0.00 44.69 4.34
460 461 1.674322 AATGGGCTTTCGGGTGACG 60.674 57.895 0.00 0.00 46.11 4.35
461 462 0.608035 TCAATGGGCTTTCGGGTGAC 60.608 55.000 0.00 0.00 0.00 3.67
462 463 0.111446 TTCAATGGGCTTTCGGGTGA 59.889 50.000 0.00 0.00 0.00 4.02
463 464 0.965439 TTTCAATGGGCTTTCGGGTG 59.035 50.000 0.00 0.00 0.00 4.61
464 465 1.203001 TCTTTCAATGGGCTTTCGGGT 60.203 47.619 0.00 0.00 0.00 5.28
465 466 1.544724 TCTTTCAATGGGCTTTCGGG 58.455 50.000 0.00 0.00 0.00 5.14
466 467 3.193267 TCAATCTTTCAATGGGCTTTCGG 59.807 43.478 0.00 0.00 0.00 4.30
467 468 4.168760 GTCAATCTTTCAATGGGCTTTCG 58.831 43.478 0.00 0.00 0.00 3.46
468 469 4.021192 TGGTCAATCTTTCAATGGGCTTTC 60.021 41.667 0.00 0.00 0.00 2.62
469 470 3.903090 TGGTCAATCTTTCAATGGGCTTT 59.097 39.130 0.00 0.00 0.00 3.51
470 471 3.509442 TGGTCAATCTTTCAATGGGCTT 58.491 40.909 0.00 0.00 0.00 4.35
471 472 3.173953 TGGTCAATCTTTCAATGGGCT 57.826 42.857 0.00 0.00 0.00 5.19
472 473 4.476628 AATGGTCAATCTTTCAATGGGC 57.523 40.909 0.00 0.00 0.00 5.36
473 474 6.780457 AGTAATGGTCAATCTTTCAATGGG 57.220 37.500 0.00 0.00 0.00 4.00
474 475 8.306038 TCAAAGTAATGGTCAATCTTTCAATGG 58.694 33.333 0.00 0.00 0.00 3.16
475 476 9.695526 TTCAAAGTAATGGTCAATCTTTCAATG 57.304 29.630 0.00 0.00 0.00 2.82
501 502 8.495148 GGTTCAAACGAATTTGCTATGATTTTT 58.505 29.630 0.00 0.00 44.22 1.94
502 503 7.117667 GGGTTCAAACGAATTTGCTATGATTTT 59.882 33.333 0.00 0.00 44.22 1.82
503 504 6.589907 GGGTTCAAACGAATTTGCTATGATTT 59.410 34.615 0.00 0.00 44.22 2.17
504 505 6.099341 GGGTTCAAACGAATTTGCTATGATT 58.901 36.000 0.00 0.00 44.22 2.57
505 506 5.184864 TGGGTTCAAACGAATTTGCTATGAT 59.815 36.000 0.00 0.00 44.22 2.45
506 507 4.520874 TGGGTTCAAACGAATTTGCTATGA 59.479 37.500 0.00 0.00 44.22 2.15
507 508 4.804108 TGGGTTCAAACGAATTTGCTATG 58.196 39.130 0.00 0.00 44.22 2.23
508 509 5.659440 ATGGGTTCAAACGAATTTGCTAT 57.341 34.783 0.00 0.00 44.22 2.97
509 510 6.576662 TTATGGGTTCAAACGAATTTGCTA 57.423 33.333 0.00 0.00 44.22 3.49
510 511 5.461032 TTATGGGTTCAAACGAATTTGCT 57.539 34.783 0.00 0.00 44.22 3.91
511 512 6.532365 TTTTATGGGTTCAAACGAATTTGC 57.468 33.333 0.00 0.00 44.22 3.68
513 514 9.765795 TGTATTTTTATGGGTTCAAACGAATTT 57.234 25.926 0.00 0.00 0.00 1.82
514 515 9.765795 TTGTATTTTTATGGGTTCAAACGAATT 57.234 25.926 0.00 0.00 0.00 2.17
515 516 9.765795 TTTGTATTTTTATGGGTTCAAACGAAT 57.234 25.926 0.00 0.00 0.00 3.34
516 517 9.765795 ATTTGTATTTTTATGGGTTCAAACGAA 57.234 25.926 0.00 0.00 0.00 3.85
560 561 9.353431 ACATGCACATATAGGTGATATTTTTCA 57.647 29.630 21.10 7.12 41.32 2.69
561 562 9.831737 GACATGCACATATAGGTGATATTTTTC 57.168 33.333 21.10 1.55 41.32 2.29
562 563 9.353431 TGACATGCACATATAGGTGATATTTTT 57.647 29.630 21.10 2.17 41.32 1.94
563 564 8.922931 TGACATGCACATATAGGTGATATTTT 57.077 30.769 21.10 4.30 41.32 1.82
564 565 9.524496 AATGACATGCACATATAGGTGATATTT 57.476 29.630 21.10 7.49 41.32 1.40
565 566 9.524496 AAATGACATGCACATATAGGTGATATT 57.476 29.630 21.10 8.15 41.32 1.28
566 567 8.953313 CAAATGACATGCACATATAGGTGATAT 58.047 33.333 21.10 11.05 41.32 1.63
567 568 7.094677 GCAAATGACATGCACATATAGGTGATA 60.095 37.037 21.10 9.25 43.29 2.15
568 569 6.294342 GCAAATGACATGCACATATAGGTGAT 60.294 38.462 21.10 8.79 43.29 3.06
569 570 5.008911 GCAAATGACATGCACATATAGGTGA 59.991 40.000 21.10 6.89 43.29 4.02
570 571 5.217393 GCAAATGACATGCACATATAGGTG 58.783 41.667 13.10 13.10 43.29 4.00
571 572 5.443185 GCAAATGACATGCACATATAGGT 57.557 39.130 6.44 0.00 43.29 3.08
581 582 3.067601 TCTCATGGATGCAAATGACATGC 59.932 43.478 11.96 0.00 44.08 4.06
582 583 4.911514 TCTCATGGATGCAAATGACATG 57.088 40.909 6.11 8.79 40.06 3.21
583 584 5.925506 TTTCTCATGGATGCAAATGACAT 57.074 34.783 6.11 0.00 0.00 3.06
584 585 5.725325 TTTTCTCATGGATGCAAATGACA 57.275 34.783 6.11 0.00 0.00 3.58
585 586 7.434307 CAGTATTTTCTCATGGATGCAAATGAC 59.566 37.037 6.11 0.00 0.00 3.06
586 587 7.339976 TCAGTATTTTCTCATGGATGCAAATGA 59.660 33.333 9.08 9.08 0.00 2.57
587 588 7.485810 TCAGTATTTTCTCATGGATGCAAATG 58.514 34.615 0.00 0.00 0.00 2.32
588 589 7.649533 TCAGTATTTTCTCATGGATGCAAAT 57.350 32.000 0.00 0.00 0.00 2.32
589 590 7.649533 ATCAGTATTTTCTCATGGATGCAAA 57.350 32.000 0.00 0.00 0.00 3.68
590 591 7.649533 AATCAGTATTTTCTCATGGATGCAA 57.350 32.000 0.00 0.00 0.00 4.08
591 592 8.750515 TTAATCAGTATTTTCTCATGGATGCA 57.249 30.769 0.00 0.00 0.00 3.96
592 593 9.455847 GTTTAATCAGTATTTTCTCATGGATGC 57.544 33.333 0.00 0.00 0.00 3.91
704 705 8.792633 CCACTACTCTGAAAATTCCATAACAAA 58.207 33.333 0.00 0.00 0.00 2.83
705 706 7.942341 ACCACTACTCTGAAAATTCCATAACAA 59.058 33.333 0.00 0.00 0.00 2.83
706 707 7.458397 ACCACTACTCTGAAAATTCCATAACA 58.542 34.615 0.00 0.00 0.00 2.41
707 708 7.606456 TGACCACTACTCTGAAAATTCCATAAC 59.394 37.037 0.00 0.00 0.00 1.89
708 709 7.685481 TGACCACTACTCTGAAAATTCCATAA 58.315 34.615 0.00 0.00 0.00 1.90
709 710 7.252612 TGACCACTACTCTGAAAATTCCATA 57.747 36.000 0.00 0.00 0.00 2.74
710 711 6.126863 TGACCACTACTCTGAAAATTCCAT 57.873 37.500 0.00 0.00 0.00 3.41
711 712 5.560722 TGACCACTACTCTGAAAATTCCA 57.439 39.130 0.00 0.00 0.00 3.53
712 713 6.877611 TTTGACCACTACTCTGAAAATTCC 57.122 37.500 0.00 0.00 0.00 3.01
713 714 7.875971 ACATTTGACCACTACTCTGAAAATTC 58.124 34.615 0.00 0.00 0.00 2.17
714 715 7.823745 ACATTTGACCACTACTCTGAAAATT 57.176 32.000 0.00 0.00 0.00 1.82
715 716 7.502226 TGAACATTTGACCACTACTCTGAAAAT 59.498 33.333 0.00 0.00 0.00 1.82
716 717 6.826231 TGAACATTTGACCACTACTCTGAAAA 59.174 34.615 0.00 0.00 0.00 2.29
717 718 6.353323 TGAACATTTGACCACTACTCTGAAA 58.647 36.000 0.00 0.00 0.00 2.69
718 719 5.924356 TGAACATTTGACCACTACTCTGAA 58.076 37.500 0.00 0.00 0.00 3.02
719 720 5.545063 TGAACATTTGACCACTACTCTGA 57.455 39.130 0.00 0.00 0.00 3.27
720 721 6.293626 CCTTTGAACATTTGACCACTACTCTG 60.294 42.308 0.00 0.00 0.00 3.35
721 722 5.765182 CCTTTGAACATTTGACCACTACTCT 59.235 40.000 0.00 0.00 0.00 3.24
722 723 5.763204 TCCTTTGAACATTTGACCACTACTC 59.237 40.000 0.00 0.00 0.00 2.59
723 724 5.531287 GTCCTTTGAACATTTGACCACTACT 59.469 40.000 0.00 0.00 0.00 2.57
724 725 5.298276 TGTCCTTTGAACATTTGACCACTAC 59.702 40.000 0.00 0.00 0.00 2.73
725 726 5.441500 TGTCCTTTGAACATTTGACCACTA 58.558 37.500 0.00 0.00 0.00 2.74
726 727 4.277476 TGTCCTTTGAACATTTGACCACT 58.723 39.130 0.00 0.00 0.00 4.00
727 728 4.647424 TGTCCTTTGAACATTTGACCAC 57.353 40.909 0.00 0.00 0.00 4.16
728 729 5.362143 TGAATGTCCTTTGAACATTTGACCA 59.638 36.000 3.28 0.00 45.02 4.02
729 730 5.841810 TGAATGTCCTTTGAACATTTGACC 58.158 37.500 3.28 0.00 45.02 4.02
730 731 5.922544 CCTGAATGTCCTTTGAACATTTGAC 59.077 40.000 3.28 0.00 45.02 3.18
731 732 5.509501 GCCTGAATGTCCTTTGAACATTTGA 60.510 40.000 3.28 0.00 45.02 2.69
732 733 4.687483 GCCTGAATGTCCTTTGAACATTTG 59.313 41.667 3.28 1.13 45.02 2.32
733 734 4.344679 TGCCTGAATGTCCTTTGAACATTT 59.655 37.500 3.28 0.00 45.02 2.32
735 736 3.499338 TGCCTGAATGTCCTTTGAACAT 58.501 40.909 0.00 0.00 38.98 2.71
736 737 2.942804 TGCCTGAATGTCCTTTGAACA 58.057 42.857 0.00 0.00 0.00 3.18
737 738 4.051237 GTTTGCCTGAATGTCCTTTGAAC 58.949 43.478 0.00 0.00 0.00 3.18
738 739 3.960102 AGTTTGCCTGAATGTCCTTTGAA 59.040 39.130 0.00 0.00 0.00 2.69
739 740 3.565307 AGTTTGCCTGAATGTCCTTTGA 58.435 40.909 0.00 0.00 0.00 2.69
740 741 5.452078 TTAGTTTGCCTGAATGTCCTTTG 57.548 39.130 0.00 0.00 0.00 2.77
741 742 6.478512 TTTTAGTTTGCCTGAATGTCCTTT 57.521 33.333 0.00 0.00 0.00 3.11
742 743 6.670695 ATTTTAGTTTGCCTGAATGTCCTT 57.329 33.333 0.00 0.00 0.00 3.36
743 744 6.948309 AGTATTTTAGTTTGCCTGAATGTCCT 59.052 34.615 0.00 0.00 0.00 3.85
744 745 7.158099 AGTATTTTAGTTTGCCTGAATGTCC 57.842 36.000 0.00 0.00 0.00 4.02
762 763 5.530176 TCCTTGCCCCTAGAAAAGTATTT 57.470 39.130 0.00 0.00 42.41 1.40
763 764 5.734031 ATCCTTGCCCCTAGAAAAGTATT 57.266 39.130 0.00 0.00 0.00 1.89
764 765 5.734031 AATCCTTGCCCCTAGAAAAGTAT 57.266 39.130 0.00 0.00 0.00 2.12
765 766 5.530176 AAATCCTTGCCCCTAGAAAAGTA 57.470 39.130 0.00 0.00 0.00 2.24
766 767 4.404185 AAATCCTTGCCCCTAGAAAAGT 57.596 40.909 0.00 0.00 0.00 2.66
767 768 7.423844 AATTAAATCCTTGCCCCTAGAAAAG 57.576 36.000 0.00 0.00 0.00 2.27
768 769 9.143155 GATAATTAAATCCTTGCCCCTAGAAAA 57.857 33.333 0.00 0.00 0.00 2.29
769 770 7.728532 GGATAATTAAATCCTTGCCCCTAGAAA 59.271 37.037 0.61 0.00 41.99 2.52
770 771 7.238710 GGATAATTAAATCCTTGCCCCTAGAA 58.761 38.462 0.61 0.00 41.99 2.10
771 772 6.240468 GGGATAATTAAATCCTTGCCCCTAGA 60.240 42.308 7.11 0.00 44.27 2.43
772 773 5.952347 GGGATAATTAAATCCTTGCCCCTAG 59.048 44.000 7.11 0.00 44.27 3.02
773 774 5.899278 GGGATAATTAAATCCTTGCCCCTA 58.101 41.667 7.11 0.00 44.27 3.53
774 775 4.752063 GGGATAATTAAATCCTTGCCCCT 58.248 43.478 7.11 0.00 44.27 4.79
775 776 3.838317 GGGGATAATTAAATCCTTGCCCC 59.162 47.826 0.00 0.00 44.27 5.80
776 777 4.488770 TGGGGATAATTAAATCCTTGCCC 58.511 43.478 7.11 5.82 44.27 5.36
777 778 6.493189 TTTGGGGATAATTAAATCCTTGCC 57.507 37.500 7.11 1.93 44.27 4.52
778 779 8.839343 CAATTTTGGGGATAATTAAATCCTTGC 58.161 33.333 7.11 0.00 44.27 4.01
779 780 9.904198 ACAATTTTGGGGATAATTAAATCCTTG 57.096 29.630 7.11 5.55 44.27 3.61
784 785 9.830975 GCACTACAATTTTGGGGATAATTAAAT 57.169 29.630 0.00 0.00 0.00 1.40
785 786 8.816894 TGCACTACAATTTTGGGGATAATTAAA 58.183 29.630 0.00 0.00 0.00 1.52
786 787 8.367660 TGCACTACAATTTTGGGGATAATTAA 57.632 30.769 0.00 0.00 0.00 1.40
787 788 7.836685 TCTGCACTACAATTTTGGGGATAATTA 59.163 33.333 0.00 0.00 0.00 1.40
788 789 6.667414 TCTGCACTACAATTTTGGGGATAATT 59.333 34.615 0.00 0.00 0.00 1.40
789 790 6.194235 TCTGCACTACAATTTTGGGGATAAT 58.806 36.000 0.00 0.00 0.00 1.28
790 791 5.575157 TCTGCACTACAATTTTGGGGATAA 58.425 37.500 0.00 0.00 0.00 1.75
791 792 5.186256 TCTGCACTACAATTTTGGGGATA 57.814 39.130 0.00 0.00 0.00 2.59
792 793 4.046286 TCTGCACTACAATTTTGGGGAT 57.954 40.909 0.00 0.00 0.00 3.85
793 794 3.517296 TCTGCACTACAATTTTGGGGA 57.483 42.857 0.00 0.00 0.00 4.81
794 795 4.806640 ATTCTGCACTACAATTTTGGGG 57.193 40.909 0.00 0.00 0.00 4.96
795 796 5.170748 GGAATTCTGCACTACAATTTTGGG 58.829 41.667 5.23 0.00 0.00 4.12
796 797 5.782047 TGGAATTCTGCACTACAATTTTGG 58.218 37.500 5.23 0.00 0.00 3.28
797 798 7.894376 AATGGAATTCTGCACTACAATTTTG 57.106 32.000 5.23 0.00 0.00 2.44
798 799 8.370182 AGAAATGGAATTCTGCACTACAATTTT 58.630 29.630 5.23 0.00 38.22 1.82
799 800 7.899973 AGAAATGGAATTCTGCACTACAATTT 58.100 30.769 5.23 0.00 38.22 1.82
800 801 7.472334 AGAAATGGAATTCTGCACTACAATT 57.528 32.000 5.23 0.00 38.22 2.32
801 802 7.472334 AAGAAATGGAATTCTGCACTACAAT 57.528 32.000 5.23 0.00 39.54 2.71
802 803 6.899393 AAGAAATGGAATTCTGCACTACAA 57.101 33.333 5.23 0.00 39.54 2.41
803 804 6.899393 AAAGAAATGGAATTCTGCACTACA 57.101 33.333 5.23 0.00 39.54 2.74
804 805 8.730680 TCTAAAAGAAATGGAATTCTGCACTAC 58.269 33.333 5.23 0.00 39.54 2.73
805 806 8.862325 TCTAAAAGAAATGGAATTCTGCACTA 57.138 30.769 5.23 0.00 39.54 2.74
806 807 7.667219 TCTCTAAAAGAAATGGAATTCTGCACT 59.333 33.333 5.23 0.00 39.54 4.40
807 808 7.820648 TCTCTAAAAGAAATGGAATTCTGCAC 58.179 34.615 5.23 0.00 39.54 4.57
808 809 8.408043 TTCTCTAAAAGAAATGGAATTCTGCA 57.592 30.769 5.23 0.00 41.10 4.41
839 840 9.480053 CCAAAGACAAAATTAAGACATTCACAT 57.520 29.630 0.00 0.00 0.00 3.21
840 841 7.925483 CCCAAAGACAAAATTAAGACATTCACA 59.075 33.333 0.00 0.00 0.00 3.58
841 842 7.095649 GCCCAAAGACAAAATTAAGACATTCAC 60.096 37.037 0.00 0.00 0.00 3.18
842 843 6.928492 GCCCAAAGACAAAATTAAGACATTCA 59.072 34.615 0.00 0.00 0.00 2.57
843 844 6.368791 GGCCCAAAGACAAAATTAAGACATTC 59.631 38.462 0.00 0.00 0.00 2.67
844 845 6.230472 GGCCCAAAGACAAAATTAAGACATT 58.770 36.000 0.00 0.00 0.00 2.71
845 846 5.279960 GGGCCCAAAGACAAAATTAAGACAT 60.280 40.000 19.95 0.00 0.00 3.06
846 847 4.039852 GGGCCCAAAGACAAAATTAAGACA 59.960 41.667 19.95 0.00 0.00 3.41
847 848 4.283467 AGGGCCCAAAGACAAAATTAAGAC 59.717 41.667 27.56 0.00 0.00 3.01
848 849 4.488770 AGGGCCCAAAGACAAAATTAAGA 58.511 39.130 27.56 0.00 0.00 2.10
849 850 4.890158 AGGGCCCAAAGACAAAATTAAG 57.110 40.909 27.56 0.00 0.00 1.85
850 851 6.728632 AGAATAGGGCCCAAAGACAAAATTAA 59.271 34.615 27.56 0.00 0.00 1.40
851 852 6.260663 AGAATAGGGCCCAAAGACAAAATTA 58.739 36.000 27.56 2.47 0.00 1.40
852 853 5.093677 AGAATAGGGCCCAAAGACAAAATT 58.906 37.500 27.56 8.63 0.00 1.82
853 854 4.687976 AGAATAGGGCCCAAAGACAAAAT 58.312 39.130 27.56 0.25 0.00 1.82
854 855 4.126520 AGAATAGGGCCCAAAGACAAAA 57.873 40.909 27.56 0.00 0.00 2.44
855 856 3.825908 AGAATAGGGCCCAAAGACAAA 57.174 42.857 27.56 0.00 0.00 2.83
856 857 3.563479 GGAAGAATAGGGCCCAAAGACAA 60.563 47.826 27.56 0.00 0.00 3.18
857 858 2.025321 GGAAGAATAGGGCCCAAAGACA 60.025 50.000 27.56 1.08 0.00 3.41
858 859 2.025321 TGGAAGAATAGGGCCCAAAGAC 60.025 50.000 27.56 11.22 0.00 3.01
859 860 2.283834 TGGAAGAATAGGGCCCAAAGA 58.716 47.619 27.56 6.32 0.00 2.52
860 861 2.826674 TGGAAGAATAGGGCCCAAAG 57.173 50.000 27.56 0.00 0.00 2.77
861 862 3.629796 GGATTGGAAGAATAGGGCCCAAA 60.630 47.826 27.56 12.73 39.91 3.28
862 863 2.091333 GGATTGGAAGAATAGGGCCCAA 60.091 50.000 27.56 6.15 40.65 4.12
863 864 1.499007 GGATTGGAAGAATAGGGCCCA 59.501 52.381 27.56 10.89 0.00 5.36
864 865 1.499007 TGGATTGGAAGAATAGGGCCC 59.501 52.381 16.46 16.46 0.00 5.80
865 866 2.175715 ACTGGATTGGAAGAATAGGGCC 59.824 50.000 0.00 0.00 0.00 5.80
866 867 3.137360 AGACTGGATTGGAAGAATAGGGC 59.863 47.826 0.00 0.00 0.00 5.19
867 868 5.604650 ACTAGACTGGATTGGAAGAATAGGG 59.395 44.000 0.00 0.00 0.00 3.53
868 869 6.739331 ACTAGACTGGATTGGAAGAATAGG 57.261 41.667 0.00 0.00 0.00 2.57
869 870 6.481644 GCAACTAGACTGGATTGGAAGAATAG 59.518 42.308 0.00 0.00 0.00 1.73
870 871 6.349300 GCAACTAGACTGGATTGGAAGAATA 58.651 40.000 0.00 0.00 0.00 1.75
871 872 5.189180 GCAACTAGACTGGATTGGAAGAAT 58.811 41.667 0.00 0.00 0.00 2.40
872 873 4.565652 GGCAACTAGACTGGATTGGAAGAA 60.566 45.833 0.00 0.00 0.00 2.52
873 874 3.055094 GGCAACTAGACTGGATTGGAAGA 60.055 47.826 0.00 0.00 0.00 2.87
874 875 3.274288 GGCAACTAGACTGGATTGGAAG 58.726 50.000 0.00 0.00 0.00 3.46
875 876 2.642311 TGGCAACTAGACTGGATTGGAA 59.358 45.455 0.00 0.00 37.61 3.53
876 877 2.027192 GTGGCAACTAGACTGGATTGGA 60.027 50.000 0.00 0.00 37.61 3.53
877 878 2.290260 TGTGGCAACTAGACTGGATTGG 60.290 50.000 0.00 0.00 37.61 3.16
878 879 2.744202 GTGTGGCAACTAGACTGGATTG 59.256 50.000 0.00 0.00 37.61 2.67
879 880 2.371841 TGTGTGGCAACTAGACTGGATT 59.628 45.455 0.00 0.00 37.61 3.01
880 881 1.977854 TGTGTGGCAACTAGACTGGAT 59.022 47.619 0.00 0.00 37.61 3.41
881 882 1.344438 CTGTGTGGCAACTAGACTGGA 59.656 52.381 0.00 0.00 37.61 3.86
882 883 1.070758 ACTGTGTGGCAACTAGACTGG 59.929 52.381 0.00 0.00 37.61 4.00
883 884 2.533266 ACTGTGTGGCAACTAGACTG 57.467 50.000 0.00 0.00 37.61 3.51
884 885 2.434336 TGAACTGTGTGGCAACTAGACT 59.566 45.455 0.00 0.00 37.61 3.24
885 886 2.802816 CTGAACTGTGTGGCAACTAGAC 59.197 50.000 0.00 0.00 37.61 2.59
886 887 2.806745 GCTGAACTGTGTGGCAACTAGA 60.807 50.000 0.00 0.00 37.61 2.43
887 888 1.532868 GCTGAACTGTGTGGCAACTAG 59.467 52.381 0.00 0.00 37.61 2.57
888 889 1.593196 GCTGAACTGTGTGGCAACTA 58.407 50.000 0.00 0.00 37.61 2.24
889 890 1.103398 GGCTGAACTGTGTGGCAACT 61.103 55.000 0.00 0.00 37.61 3.16
900 901 2.699954 CGTCAGTAAATGGGCTGAACT 58.300 47.619 0.00 0.00 42.51 3.01
904 905 0.729116 CAGCGTCAGTAAATGGGCTG 59.271 55.000 7.68 7.68 44.55 4.85
911 912 1.373748 GCCGTCCAGCGTCAGTAAA 60.374 57.895 0.00 0.00 39.32 2.01
923 924 1.002624 TCAACAGATTGGGCCGTCC 60.003 57.895 0.00 0.00 36.39 4.79
940 941 4.020662 AGTGGGATTTGTTCTCTCTGAGTC 60.021 45.833 4.32 0.00 27.45 3.36
943 944 3.261897 GGAGTGGGATTTGTTCTCTCTGA 59.738 47.826 0.00 0.00 28.73 3.27
967 968 0.741915 GTCAGAGGATCCCAGTCGAC 59.258 60.000 8.55 7.70 33.66 4.20
983 984 1.133136 GGGGGAGTGATAGCTAGGTCA 60.133 57.143 0.00 0.00 0.00 4.02
1187 1295 1.963338 GCACTTGAAGCGGCAGAGT 60.963 57.895 1.45 0.00 0.00 3.24
1260 1368 3.267597 CTTTTTGCGGTGCTCGGGG 62.268 63.158 2.61 0.00 39.69 5.73
1261 1369 2.255252 CTTTTTGCGGTGCTCGGG 59.745 61.111 2.61 0.00 39.69 5.14
1262 1370 2.429069 GCTTTTTGCGGTGCTCGG 60.429 61.111 2.61 0.00 39.69 4.63
1271 1379 0.467804 TGTTTGGGGGAGCTTTTTGC 59.532 50.000 0.00 0.00 43.29 3.68
1272 1380 1.202639 GGTGTTTGGGGGAGCTTTTTG 60.203 52.381 0.00 0.00 0.00 2.44
1273 1381 1.128200 GGTGTTTGGGGGAGCTTTTT 58.872 50.000 0.00 0.00 0.00 1.94
1274 1382 1.112916 CGGTGTTTGGGGGAGCTTTT 61.113 55.000 0.00 0.00 0.00 2.27
1275 1383 1.530655 CGGTGTTTGGGGGAGCTTT 60.531 57.895 0.00 0.00 0.00 3.51
1527 1855 1.301087 CGGCAACACGGTCCACTTA 60.301 57.895 0.00 0.00 0.00 2.24
1632 1966 0.445436 GCTGGTCGTGCTCATTTCTG 59.555 55.000 0.00 0.00 0.00 3.02
1634 1968 1.160137 AAGCTGGTCGTGCTCATTTC 58.840 50.000 0.00 0.00 40.22 2.17
1646 1980 1.774217 TCAGGGTCCCAAAGCTGGT 60.774 57.895 11.55 0.00 41.72 4.00
1647 1981 1.303643 GTCAGGGTCCCAAAGCTGG 60.304 63.158 11.55 0.00 43.10 4.85
1648 1982 0.038744 ATGTCAGGGTCCCAAAGCTG 59.961 55.000 11.55 0.00 0.00 4.24
1682 2034 2.165845 CCTCCGGTTTCAGACGAATACT 59.834 50.000 0.00 0.00 0.00 2.12
1713 2065 4.703575 TCTGCATTCCATTTCTTCTCCTTG 59.296 41.667 0.00 0.00 0.00 3.61
1737 2089 7.148672 GCAGACTGACGATTAATGATCCTAATG 60.149 40.741 6.65 0.09 0.00 1.90
1842 2209 2.497273 GTTCATCCATGTTTCCCCCTTG 59.503 50.000 0.00 0.00 0.00 3.61
1864 2231 0.904649 TCAGCGTCAGGGACATCAAT 59.095 50.000 0.00 0.00 32.09 2.57
1878 2245 1.446792 ATCAAGCAGACCGTCAGCG 60.447 57.895 9.96 0.00 33.83 5.18
1879 2246 1.364626 CCATCAAGCAGACCGTCAGC 61.365 60.000 7.80 7.80 0.00 4.26
1880 2247 0.036952 ACCATCAAGCAGACCGTCAG 60.037 55.000 0.40 0.00 0.00 3.51
1881 2248 0.396435 AACCATCAAGCAGACCGTCA 59.604 50.000 0.40 0.00 0.00 4.35
1882 2249 1.523758 AAACCATCAAGCAGACCGTC 58.476 50.000 0.00 0.00 0.00 4.79
1883 2250 1.981256 AAAACCATCAAGCAGACCGT 58.019 45.000 0.00 0.00 0.00 4.83
2015 2391 2.480419 GTGTCAACGCTATGCTTCAGTT 59.520 45.455 0.00 0.00 0.00 3.16
2091 2482 1.072173 TCCGGATGAATCGCAATCCAT 59.928 47.619 0.00 0.00 32.91 3.41
2316 7122 3.008266 TGAAGAACTGATGATGCCTGTCA 59.992 43.478 0.00 0.00 0.00 3.58
2363 7190 3.438087 CAGTGACCAATTCAAGTAGGCAG 59.562 47.826 0.00 0.00 35.39 4.85
2369 7196 3.879295 CTGTCACAGTGACCAATTCAAGT 59.121 43.478 27.51 0.00 46.40 3.16
2382 7209 2.679059 GCATGCATACCTCTGTCACAGT 60.679 50.000 14.21 0.00 32.61 3.55
2535 7374 2.769663 ACCGAATACATGGAGGTAGCAA 59.230 45.455 0.00 0.00 32.76 3.91
2564 7403 1.070786 ATTCGCTCAACCACCACGT 59.929 52.632 0.00 0.00 0.00 4.49
2572 7411 7.413475 AATGATCATAGTACATTCGCTCAAC 57.587 36.000 9.04 0.00 29.89 3.18
2611 7450 2.296190 CCCTGCATGATGACCATTGATG 59.704 50.000 0.00 0.00 31.94 3.07
2632 7471 7.802251 CACAGCTGCAAATAGAAGATATAAAGC 59.198 37.037 15.27 0.00 0.00 3.51
2652 7491 7.770897 CAGTAAAATACTTATCTTCCCACAGCT 59.229 37.037 0.00 0.00 36.76 4.24
2681 7520 7.924103 CAAGTGGTTTGTTTACTAAATCACC 57.076 36.000 9.49 0.00 45.64 4.02
2696 7535 2.335316 TGTTAGCCGACAAGTGGTTT 57.665 45.000 0.00 0.00 0.00 3.27
2699 7538 6.861065 ATTATATTGTTAGCCGACAAGTGG 57.139 37.500 8.26 0.00 42.28 4.00
2797 7637 3.206150 ACATTATGATCGAACCACAGCC 58.794 45.455 0.00 0.00 0.00 4.85
2847 7687 1.952296 GCATATTGCAGGTCTTCTGGG 59.048 52.381 0.00 0.00 44.26 4.45
2857 7697 8.053664 TGTACAAACAAAGATGGCATATTGCAG 61.054 37.037 19.70 11.29 37.68 4.41
2914 7754 3.485216 CGGCGTTGCTGATTAAGTTAAGG 60.485 47.826 0.00 0.00 37.02 2.69
2922 7762 1.017177 GTGGACGGCGTTGCTGATTA 61.017 55.000 16.19 0.00 38.46 1.75
2926 7766 2.443957 GAAAGTGGACGGCGTTGCTG 62.444 60.000 16.19 0.00 41.29 4.41
2932 7772 3.039202 GCATGGAAAGTGGACGGCG 62.039 63.158 4.80 4.80 0.00 6.46
2970 7810 2.159043 TGAGCTGCACAGGTATCTTAGC 60.159 50.000 1.02 0.00 39.57 3.09
2982 7822 5.220931 CCTTTTTATAGGATGTGAGCTGCAC 60.221 44.000 1.02 0.00 41.74 4.57
2983 7823 4.883585 CCTTTTTATAGGATGTGAGCTGCA 59.116 41.667 1.02 0.00 37.50 4.41
2984 7824 4.276926 CCCTTTTTATAGGATGTGAGCTGC 59.723 45.833 0.00 0.00 37.50 5.25
2985 7825 4.823989 CCCCTTTTTATAGGATGTGAGCTG 59.176 45.833 0.00 0.00 37.50 4.24
2986 7826 4.689983 GCCCCTTTTTATAGGATGTGAGCT 60.690 45.833 0.00 0.00 37.50 4.09
2987 7827 3.570125 GCCCCTTTTTATAGGATGTGAGC 59.430 47.826 0.00 0.00 37.50 4.26
2988 7828 4.145052 GGCCCCTTTTTATAGGATGTGAG 58.855 47.826 0.00 0.00 37.50 3.51
3020 7890 3.502191 TTTTTGAACACAAGAGCGCTT 57.498 38.095 13.26 0.00 33.74 4.68
3096 7968 7.475840 ACTGTCTGAAAGTTTTCTGAACAATC 58.524 34.615 13.49 4.72 43.56 2.67
3105 7977 4.882671 TGCTGACTGTCTGAAAGTTTTC 57.117 40.909 17.48 0.00 37.69 2.29
3152 8026 9.999660 TCTATCGTATAGTCATCTTGTAGAAGT 57.000 33.333 0.00 0.00 0.00 3.01
3321 8196 2.079158 ACAGCTTTCACCATGACATCG 58.921 47.619 0.00 0.00 0.00 3.84
3346 8221 3.131709 AGCACTGCATCACTTACAGTT 57.868 42.857 3.30 0.00 42.59 3.16
3349 8224 2.993220 CGTAAGCACTGCATCACTTACA 59.007 45.455 22.36 0.00 42.88 2.41
3350 8225 3.250744 TCGTAAGCACTGCATCACTTAC 58.749 45.455 16.87 16.87 40.55 2.34
3351 8226 3.586100 TCGTAAGCACTGCATCACTTA 57.414 42.857 3.30 0.00 37.18 2.24
3352 8227 2.455674 TCGTAAGCACTGCATCACTT 57.544 45.000 3.30 0.00 37.18 3.16
3355 8230 1.655484 CCATCGTAAGCACTGCATCA 58.345 50.000 3.30 0.00 37.18 3.07
3356 8231 0.940126 CCCATCGTAAGCACTGCATC 59.060 55.000 3.30 0.00 37.18 3.91
3357 8232 1.097547 GCCCATCGTAAGCACTGCAT 61.098 55.000 3.30 0.00 37.18 3.96
3358 8233 1.745115 GCCCATCGTAAGCACTGCA 60.745 57.895 3.30 0.00 37.18 4.41
3359 8234 2.813179 CGCCCATCGTAAGCACTGC 61.813 63.158 0.00 0.00 37.18 4.40
3360 8235 3.398920 CGCCCATCGTAAGCACTG 58.601 61.111 0.00 0.00 37.18 3.66
3369 8244 4.873129 CCTGGTCGACGCCCATCG 62.873 72.222 9.92 0.00 43.63 3.84
3375 8250 3.358076 CTTCTCCCCTGGTCGACGC 62.358 68.421 9.92 3.20 0.00 5.19
3376 8251 2.711922 CCTTCTCCCCTGGTCGACG 61.712 68.421 9.92 0.00 0.00 5.12
3378 8253 2.683933 GCCTTCTCCCCTGGTCGA 60.684 66.667 0.00 0.00 0.00 4.20
3379 8254 4.148825 CGCCTTCTCCCCTGGTCG 62.149 72.222 0.00 0.00 0.00 4.79
3381 8256 0.838987 TTTACGCCTTCTCCCCTGGT 60.839 55.000 0.00 0.00 0.00 4.00
3382 8257 0.392595 GTTTACGCCTTCTCCCCTGG 60.393 60.000 0.00 0.00 0.00 4.45
3383 8258 0.323629 TGTTTACGCCTTCTCCCCTG 59.676 55.000 0.00 0.00 0.00 4.45
3384 8259 1.003233 CTTGTTTACGCCTTCTCCCCT 59.997 52.381 0.00 0.00 0.00 4.79
3385 8260 1.450025 CTTGTTTACGCCTTCTCCCC 58.550 55.000 0.00 0.00 0.00 4.81
3386 8261 0.803117 GCTTGTTTACGCCTTCTCCC 59.197 55.000 0.00 0.00 0.00 4.30
3388 8263 3.188460 TCATTGCTTGTTTACGCCTTCTC 59.812 43.478 0.00 0.00 0.00 2.87
3389 8264 3.146066 TCATTGCTTGTTTACGCCTTCT 58.854 40.909 0.00 0.00 0.00 2.85
3390 8265 3.552604 TCATTGCTTGTTTACGCCTTC 57.447 42.857 0.00 0.00 0.00 3.46
3391 8266 3.568007 TCTTCATTGCTTGTTTACGCCTT 59.432 39.130 0.00 0.00 0.00 4.35
3392 8267 3.146066 TCTTCATTGCTTGTTTACGCCT 58.854 40.909 0.00 0.00 0.00 5.52
3393 8268 3.552604 TCTTCATTGCTTGTTTACGCC 57.447 42.857 0.00 0.00 0.00 5.68
3395 8270 6.430451 ACTTCTTCTTCATTGCTTGTTTACG 58.570 36.000 0.00 0.00 0.00 3.18
3398 8273 7.147915 TGGTTACTTCTTCTTCATTGCTTGTTT 60.148 33.333 0.00 0.00 0.00 2.83
3399 8274 6.321181 TGGTTACTTCTTCTTCATTGCTTGTT 59.679 34.615 0.00 0.00 0.00 2.83
3400 8275 5.827797 TGGTTACTTCTTCTTCATTGCTTGT 59.172 36.000 0.00 0.00 0.00 3.16
3402 8277 6.716628 TCATGGTTACTTCTTCTTCATTGCTT 59.283 34.615 0.00 0.00 0.00 3.91
3403 8278 6.150140 GTCATGGTTACTTCTTCTTCATTGCT 59.850 38.462 0.00 0.00 0.00 3.91
3404 8279 6.317857 GTCATGGTTACTTCTTCTTCATTGC 58.682 40.000 0.00 0.00 0.00 3.56
3405 8280 6.537566 CGTCATGGTTACTTCTTCTTCATTG 58.462 40.000 0.00 0.00 0.00 2.82
3406 8281 5.122396 GCGTCATGGTTACTTCTTCTTCATT 59.878 40.000 0.00 0.00 0.00 2.57
3407 8282 4.631813 GCGTCATGGTTACTTCTTCTTCAT 59.368 41.667 0.00 0.00 0.00 2.57
3408 8283 3.994392 GCGTCATGGTTACTTCTTCTTCA 59.006 43.478 0.00 0.00 0.00 3.02
3409 8284 3.060895 CGCGTCATGGTTACTTCTTCTTC 59.939 47.826 0.00 0.00 0.00 2.87
3410 8285 2.993899 CGCGTCATGGTTACTTCTTCTT 59.006 45.455 0.00 0.00 0.00 2.52
3411 8286 2.607187 CGCGTCATGGTTACTTCTTCT 58.393 47.619 0.00 0.00 0.00 2.85
3412 8287 1.659098 CCGCGTCATGGTTACTTCTTC 59.341 52.381 4.92 0.00 0.00 2.87
3414 8289 0.108329 CCCGCGTCATGGTTACTTCT 60.108 55.000 4.92 0.00 0.00 2.85
3415 8290 0.108520 TCCCGCGTCATGGTTACTTC 60.109 55.000 4.92 0.00 0.00 3.01
3416 8291 0.108329 CTCCCGCGTCATGGTTACTT 60.108 55.000 4.92 0.00 0.00 2.24
3417 8292 0.968901 TCTCCCGCGTCATGGTTACT 60.969 55.000 4.92 0.00 0.00 2.24
3418 8293 0.527817 CTCTCCCGCGTCATGGTTAC 60.528 60.000 4.92 0.00 0.00 2.50
3419 8294 0.968901 ACTCTCCCGCGTCATGGTTA 60.969 55.000 4.92 0.00 0.00 2.85
3421 8296 1.827399 AAACTCTCCCGCGTCATGGT 61.827 55.000 4.92 0.00 0.00 3.55
3422 8297 0.174845 TAAACTCTCCCGCGTCATGG 59.825 55.000 4.92 0.00 0.00 3.66
3423 8298 2.004583 TTAAACTCTCCCGCGTCATG 57.995 50.000 4.92 0.00 0.00 3.07
3424 8299 2.754946 TTTAAACTCTCCCGCGTCAT 57.245 45.000 4.92 0.00 0.00 3.06
3425 8300 2.343101 CATTTAAACTCTCCCGCGTCA 58.657 47.619 4.92 0.00 0.00 4.35
3433 8308 6.259550 ACCACTCAATGCATTTAAACTCTC 57.740 37.500 9.83 0.00 0.00 3.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.