Multiple sequence alignment - TraesCS5D01G187500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G187500 chr5D 100.000 5523 0 0 1 5523 289426195 289420673 0.000000e+00 10200.0
1 TraesCS5D01G187500 chr5D 96.644 1013 16 4 4527 5523 289727727 289726717 0.000000e+00 1666.0
2 TraesCS5D01G187500 chr5D 96.421 950 27 2 3627 4569 289728673 289727724 0.000000e+00 1559.0
3 TraesCS5D01G187500 chr5D 89.583 768 71 6 2623 3388 289743709 289742949 0.000000e+00 966.0
4 TraesCS5D01G187500 chr5D 85.865 948 72 12 3507 4408 23824433 23823502 0.000000e+00 952.0
5 TraesCS5D01G187500 chr5D 88.740 746 49 7 925 1646 289798956 289798222 0.000000e+00 880.0
6 TraesCS5D01G187500 chr5D 95.499 511 18 2 5013 5523 289355363 289354858 0.000000e+00 811.0
7 TraesCS5D01G187500 chr5D 85.216 832 74 27 1697 2514 289744597 289743801 0.000000e+00 809.0
8 TraesCS5D01G187500 chr5D 87.153 685 66 10 3785 4454 29904637 29905314 0.000000e+00 758.0
9 TraesCS5D01G187500 chr5D 91.014 434 36 2 1007 1440 289501125 289500695 2.870000e-162 582.0
10 TraesCS5D01G187500 chr5D 79.747 316 43 14 185 481 557048787 557048474 5.610000e-50 209.0
11 TraesCS5D01G187500 chr5D 91.304 46 2 1 4870 4915 289355824 289355781 1.660000e-05 62.1
12 TraesCS5D01G187500 chr5D 100.000 30 0 0 984 1013 289501160 289501131 7.730000e-04 56.5
13 TraesCS5D01G187500 chr7A 93.376 2023 106 14 2672 4677 627047897 627045886 0.000000e+00 2968.0
14 TraesCS5D01G187500 chr7A 93.898 1098 42 14 4435 5518 627009336 627008250 0.000000e+00 1633.0
15 TraesCS5D01G187500 chr7A 88.567 1207 56 27 778 1966 627011758 627010616 0.000000e+00 1389.0
16 TraesCS5D01G187500 chr7A 88.557 1206 57 27 779 1966 627049527 627048385 0.000000e+00 1387.0
17 TraesCS5D01G187500 chr7A 91.900 1000 65 8 3511 4501 580506030 580505038 0.000000e+00 1384.0
18 TraesCS5D01G187500 chr7A 95.718 794 26 4 2672 3461 627010128 627009339 0.000000e+00 1271.0
19 TraesCS5D01G187500 chr7A 94.561 478 20 2 5051 5523 628385914 628385438 0.000000e+00 734.0
20 TraesCS5D01G187500 chr7A 91.068 515 26 6 5014 5523 627232599 627232100 0.000000e+00 678.0
21 TraesCS5D01G187500 chr7A 89.403 519 42 8 5014 5523 628645452 628645966 4.660000e-180 641.0
22 TraesCS5D01G187500 chr7A 86.095 525 45 13 5014 5519 594434392 594434907 1.750000e-149 540.0
23 TraesCS5D01G187500 chr7A 90.306 196 10 3 4732 4927 626992999 626992813 1.190000e-61 248.0
24 TraesCS5D01G187500 chr7A 96.063 127 5 0 2525 2651 323448469 323448595 2.020000e-49 207.0
25 TraesCS5D01G187500 chr7A 94.615 130 7 0 2528 2657 580506825 580506696 9.380000e-48 202.0
26 TraesCS5D01G187500 chr7A 80.783 281 22 17 4679 4940 627045787 627045520 2.030000e-44 191.0
27 TraesCS5D01G187500 chr7A 80.783 281 22 16 4679 4940 627119975 627119708 2.030000e-44 191.0
28 TraesCS5D01G187500 chr7A 100.000 43 0 0 4954 4996 627045440 627045398 4.590000e-11 80.5
29 TraesCS5D01G187500 chr1B 93.020 2020 117 12 2672 4677 426499642 426497633 0.000000e+00 2928.0
30 TraesCS5D01G187500 chr1B 91.727 2067 148 11 2623 4677 133114088 133112033 0.000000e+00 2848.0
31 TraesCS5D01G187500 chr1B 80.419 1338 208 36 2744 4041 133127067 133125744 0.000000e+00 970.0
32 TraesCS5D01G187500 chr1B 90.026 772 45 8 908 1658 426502678 426501918 0.000000e+00 970.0
33 TraesCS5D01G187500 chr1B 95.381 433 19 1 5091 5523 133124120 133123689 0.000000e+00 688.0
34 TraesCS5D01G187500 chr1B 85.285 632 64 20 1896 2514 133114795 133114180 4.700000e-175 625.0
35 TraesCS5D01G187500 chr1B 84.590 597 55 20 875 1440 133129155 133128565 4.830000e-155 558.0
36 TraesCS5D01G187500 chr1B 87.500 400 34 7 1697 2090 426501921 426501532 1.090000e-121 448.0
37 TraesCS5D01G187500 chr1B 86.561 253 13 8 4693 4935 133111940 133111699 5.490000e-65 259.0
38 TraesCS5D01G187500 chr1B 96.094 128 5 0 4808 4935 426482469 426482342 5.610000e-50 209.0
39 TraesCS5D01G187500 chr1B 94.615 130 7 0 2523 2652 626100518 626100389 9.380000e-48 202.0
40 TraesCS5D01G187500 chr1B 82.199 191 11 8 4754 4935 426497418 426497242 5.770000e-30 143.0
41 TraesCS5D01G187500 chr1B 86.726 113 4 5 4679 4781 426497534 426497423 1.260000e-21 115.0
42 TraesCS5D01G187500 chr1B 98.246 57 1 0 4954 5010 398961727 398961783 3.520000e-17 100.0
43 TraesCS5D01G187500 chr1B 93.443 61 3 1 4679 4739 426482569 426482510 7.620000e-14 89.8
44 TraesCS5D01G187500 chr1B 97.561 41 1 0 1840 1880 133114831 133114791 2.760000e-08 71.3
45 TraesCS5D01G187500 chr7B 83.470 1954 258 45 2744 4656 588880995 588879066 0.000000e+00 1759.0
46 TraesCS5D01G187500 chr7B 88.947 769 45 12 908 1658 588502441 588501695 0.000000e+00 913.0
47 TraesCS5D01G187500 chr7B 93.064 519 24 9 5011 5523 588823536 588823024 0.000000e+00 749.0
48 TraesCS5D01G187500 chr7B 91.698 530 19 10 5010 5523 589919870 589920390 0.000000e+00 712.0
49 TraesCS5D01G187500 chr7B 95.612 433 19 0 5091 5523 589735342 589735774 0.000000e+00 695.0
50 TraesCS5D01G187500 chr7B 84.422 597 56 21 875 1440 588883035 588882445 2.250000e-153 553.0
51 TraesCS5D01G187500 chr7B 90.087 343 18 7 1697 2035 588501698 588501368 1.100000e-116 431.0
52 TraesCS5D01G187500 chr7B 95.122 82 3 1 4808 4888 588823794 588823713 1.610000e-25 128.0
53 TraesCS5D01G187500 chr7B 85.217 115 12 4 4855 4969 589734928 589735037 4.520000e-21 113.0
54 TraesCS5D01G187500 chr7B 100.000 57 0 0 4954 5010 589696446 589696390 7.570000e-19 106.0
55 TraesCS5D01G187500 chr7B 98.246 57 1 0 4954 5010 588823618 588823562 3.520000e-17 100.0
56 TraesCS5D01G187500 chr7B 96.667 60 1 1 4680 4739 588823882 588823824 1.270000e-16 99.0
57 TraesCS5D01G187500 chr7B 94.915 59 3 0 4877 4935 589696596 589696538 5.890000e-15 93.5
58 TraesCS5D01G187500 chr6A 91.473 1032 70 8 3652 4676 107262745 107263765 0.000000e+00 1402.0
59 TraesCS5D01G187500 chr7D 88.554 1162 80 21 1007 2160 545270527 545269411 0.000000e+00 1360.0
60 TraesCS5D01G187500 chr7D 93.671 790 43 3 2678 3466 545268959 545268176 0.000000e+00 1175.0
61 TraesCS5D01G187500 chr7D 92.929 99 7 0 4795 4893 545267438 545267340 1.600000e-30 145.0
62 TraesCS5D01G187500 chr7D 86.726 113 12 3 427 538 123225126 123225236 7.510000e-24 122.0
63 TraesCS5D01G187500 chr7D 79.121 182 30 5 7 186 7531278 7531103 9.720000e-23 119.0
64 TraesCS5D01G187500 chr7D 100.000 57 0 0 4954 5010 545267244 545267188 7.570000e-19 106.0
65 TraesCS5D01G187500 chr7D 100.000 57 0 0 4954 5010 545650282 545650338 7.570000e-19 106.0
66 TraesCS5D01G187500 chr7D 100.000 30 0 0 984 1013 545270562 545270533 7.730000e-04 56.5
67 TraesCS5D01G187500 chr2B 90.374 883 66 10 3792 4667 182135176 182134306 0.000000e+00 1142.0
68 TraesCS5D01G187500 chr2B 90.196 714 53 11 2634 3339 182141229 182140525 0.000000e+00 915.0
69 TraesCS5D01G187500 chr2B 85.786 598 52 16 1917 2503 182141838 182141263 2.200000e-168 603.0
70 TraesCS5D01G187500 chr2B 91.324 438 38 0 1007 1444 182147777 182147340 2.850000e-167 599.0
71 TraesCS5D01G187500 chr2B 90.868 438 29 4 3326 3761 182135602 182135174 1.330000e-160 577.0
72 TraesCS5D01G187500 chr2B 86.822 516 27 13 5011 5523 135512554 135513031 6.300000e-149 538.0
73 TraesCS5D01G187500 chr2B 96.124 129 3 1 2525 2651 769078041 769078169 5.610000e-50 209.0
74 TraesCS5D01G187500 chr2B 83.475 236 16 9 4679 4901 127790557 127790332 1.210000e-46 198.0
75 TraesCS5D01G187500 chr2B 90.196 102 0 5 4679 4770 182134222 182134121 2.090000e-24 124.0
76 TraesCS5D01G187500 chr2B 96.970 66 2 0 1439 1504 182142163 182142098 1.630000e-20 111.0
77 TraesCS5D01G187500 chr2B 90.323 62 5 1 551 611 768608272 768608211 4.590000e-11 80.5
78 TraesCS5D01G187500 chr2B 86.301 73 3 1 1579 1651 182142036 182141971 7.670000e-09 73.1
79 TraesCS5D01G187500 chr3A 88.483 903 72 10 3514 4408 723439730 723440608 0.000000e+00 1062.0
80 TraesCS5D01G187500 chr3A 95.276 127 6 0 2525 2651 414733861 414733735 9.380000e-48 202.0
81 TraesCS5D01G187500 chr3A 90.323 62 5 1 551 611 455087925 455087986 4.590000e-11 80.5
82 TraesCS5D01G187500 chrUn 89.077 769 40 11 908 1655 383291300 383292045 0.000000e+00 915.0
83 TraesCS5D01G187500 chrUn 95.714 70 2 1 1764 1832 383292142 383292211 1.630000e-20 111.0
84 TraesCS5D01G187500 chr6D 80.319 376 53 10 17 378 337836045 337836413 1.180000e-66 265.0
85 TraesCS5D01G187500 chr6D 74.910 554 97 26 19 538 429161601 429161056 1.210000e-51 215.0
86 TraesCS5D01G187500 chr5B 76.600 500 91 20 57 539 478301769 478302259 9.180000e-63 252.0
87 TraesCS5D01G187500 chr4A 78.453 362 64 12 7 356 661676654 661677013 2.000000e-54 224.0
88 TraesCS5D01G187500 chr4A 80.833 240 40 5 7 242 113504111 113503874 3.400000e-42 183.0
89 TraesCS5D01G187500 chr4A 90.476 63 4 2 436 497 923973 924034 1.280000e-11 82.4
90 TraesCS5D01G187500 chr4A 82.000 100 14 4 551 648 658934352 658934255 1.280000e-11 82.4
91 TraesCS5D01G187500 chr1A 78.431 357 56 13 37 378 101631405 101631055 4.330000e-51 213.0
92 TraesCS5D01G187500 chr2D 96.063 127 5 0 2525 2651 526524995 526525121 2.020000e-49 207.0
93 TraesCS5D01G187500 chr6B 77.394 376 61 13 17 378 543934774 543935139 9.380000e-48 202.0
94 TraesCS5D01G187500 chr6B 93.893 131 8 0 2523 2653 548811213 548811083 1.210000e-46 198.0
95 TraesCS5D01G187500 chr6B 84.043 94 9 5 398 488 17096552 17096642 9.860000e-13 86.1
96 TraesCS5D01G187500 chr1D 95.312 128 4 2 2525 2651 289532146 289532272 9.380000e-48 202.0
97 TraesCS5D01G187500 chr1D 95.312 128 4 2 2525 2651 289597362 289597488 9.380000e-48 202.0
98 TraesCS5D01G187500 chr3B 76.883 385 66 15 173 539 593941071 593940692 4.360000e-46 196.0
99 TraesCS5D01G187500 chr3B 74.354 503 86 23 67 535 620189992 620189499 2.050000e-39 174.0
100 TraesCS5D01G187500 chr3B 84.615 104 12 3 551 652 40726968 40727069 3.520000e-17 100.0
101 TraesCS5D01G187500 chr5A 78.912 294 46 11 92 378 17366073 17365789 9.450000e-43 185.0
102 TraesCS5D01G187500 chr5A 88.889 63 5 2 436 497 658348023 658347962 5.930000e-10 76.8
103 TraesCS5D01G187500 chr3D 85.294 136 15 4 407 538 43508132 43508266 9.650000e-28 135.0
104 TraesCS5D01G187500 chr2A 81.000 100 15 4 551 648 744950198 744950101 5.930000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G187500 chr5D 289420673 289426195 5522 True 10200.000000 10200 100.000000 1 5523 1 chr5D.!!$R2 5522
1 TraesCS5D01G187500 chr5D 289726717 289728673 1956 True 1612.500000 1666 96.532500 3627 5523 2 chr5D.!!$R7 1896
2 TraesCS5D01G187500 chr5D 23823502 23824433 931 True 952.000000 952 85.865000 3507 4408 1 chr5D.!!$R1 901
3 TraesCS5D01G187500 chr5D 289742949 289744597 1648 True 887.500000 966 87.399500 1697 3388 2 chr5D.!!$R8 1691
4 TraesCS5D01G187500 chr5D 289798222 289798956 734 True 880.000000 880 88.740000 925 1646 1 chr5D.!!$R3 721
5 TraesCS5D01G187500 chr5D 29904637 29905314 677 False 758.000000 758 87.153000 3785 4454 1 chr5D.!!$F1 669
6 TraesCS5D01G187500 chr5D 289354858 289355824 966 True 436.550000 811 93.401500 4870 5523 2 chr5D.!!$R5 653
7 TraesCS5D01G187500 chr7A 627008250 627011758 3508 True 1431.000000 1633 92.727667 778 5518 3 chr7A.!!$R6 4740
8 TraesCS5D01G187500 chr7A 627045398 627049527 4129 True 1156.625000 2968 90.679000 779 4996 4 chr7A.!!$R7 4217
9 TraesCS5D01G187500 chr7A 580505038 580506825 1787 True 793.000000 1384 93.257500 2528 4501 2 chr7A.!!$R5 1973
10 TraesCS5D01G187500 chr7A 628645452 628645966 514 False 641.000000 641 89.403000 5014 5523 1 chr7A.!!$F3 509
11 TraesCS5D01G187500 chr7A 594434392 594434907 515 False 540.000000 540 86.095000 5014 5519 1 chr7A.!!$F2 505
12 TraesCS5D01G187500 chr1B 133111699 133114831 3132 True 950.825000 2848 90.283500 1840 4935 4 chr1B.!!$R2 3095
13 TraesCS5D01G187500 chr1B 426497242 426502678 5436 True 920.800000 2928 87.894200 908 4935 5 chr1B.!!$R5 4027
14 TraesCS5D01G187500 chr1B 133123689 133129155 5466 True 738.666667 970 86.796667 875 5523 3 chr1B.!!$R3 4648
15 TraesCS5D01G187500 chr7B 588879066 588883035 3969 True 1156.000000 1759 83.946000 875 4656 2 chr7B.!!$R3 3781
16 TraesCS5D01G187500 chr7B 589919870 589920390 520 False 712.000000 712 91.698000 5010 5523 1 chr7B.!!$F1 513
17 TraesCS5D01G187500 chr7B 588501368 588502441 1073 True 672.000000 913 89.517000 908 2035 2 chr7B.!!$R1 1127
18 TraesCS5D01G187500 chr7B 589734928 589735774 846 False 404.000000 695 90.414500 4855 5523 2 chr7B.!!$F2 668
19 TraesCS5D01G187500 chr7B 588823024 588823882 858 True 269.000000 749 95.774750 4680 5523 4 chr7B.!!$R2 843
20 TraesCS5D01G187500 chr6A 107262745 107263765 1020 False 1402.000000 1402 91.473000 3652 4676 1 chr6A.!!$F1 1024
21 TraesCS5D01G187500 chr7D 545267188 545270562 3374 True 568.500000 1360 95.030800 984 5010 5 chr7D.!!$R2 4026
22 TraesCS5D01G187500 chr2B 182134121 182135602 1481 True 614.333333 1142 90.479333 3326 4770 3 chr2B.!!$R4 1444
23 TraesCS5D01G187500 chr2B 182140525 182142163 1638 True 425.525000 915 89.813250 1439 3339 4 chr2B.!!$R5 1900
24 TraesCS5D01G187500 chr3A 723439730 723440608 878 False 1062.000000 1062 88.483000 3514 4408 1 chr3A.!!$F2 894
25 TraesCS5D01G187500 chrUn 383291300 383292211 911 False 513.000000 915 92.395500 908 1832 2 chrUn.!!$F1 924
26 TraesCS5D01G187500 chr6D 429161056 429161601 545 True 215.000000 215 74.910000 19 538 1 chr6D.!!$R1 519

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
167 169 0.039708 GCAGCAACAGCAGAAGGAAC 60.040 55.0 0.00 0.0 0.00 3.62 F
445 462 0.097150 GCGCGGGAACATTTCTCTTC 59.903 55.0 8.83 0.0 0.00 2.87 F
698 715 0.250166 GCCAGTAGTGGTTGTTCGGT 60.250 55.0 18.02 0.0 46.96 4.69 F
2278 4385 0.174845 TGGGCTTAATCGTGGACTCG 59.825 55.0 0.00 0.0 0.00 4.18 F
2942 5569 0.036765 TCGGGATTCACAAGGTTCGG 60.037 55.0 0.00 0.0 0.00 4.30 F
3832 6552 5.825532 TCATCACAGATTCCCACCATTTTA 58.174 37.5 0.00 0.0 0.00 1.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1735 1953 0.042731 AGGTTAGCTGTAGCCCCTCA 59.957 55.000 0.00 0.00 43.38 3.86 R
2261 4368 0.458669 TCCGAGTCCACGATTAAGCC 59.541 55.000 0.00 0.00 35.09 4.35 R
2516 4834 2.302157 AGTCTAAAGTGGAAACGGAGGG 59.698 50.000 0.00 0.00 0.00 4.30 R
3748 6444 0.865218 CTCGTGCGCTCTTCTGCTAG 60.865 60.000 9.73 0.00 0.00 3.42 R
4132 7105 1.973515 TGGACATGAGAGAACTGCAGT 59.026 47.619 15.25 15.25 0.00 4.40 R
4805 8043 3.193267 AGTTGCTGCTTGTCAAGTTGAAA 59.807 39.130 14.03 0.00 0.00 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 2.429351 CGAACGACAGCGAGCAGTC 61.429 63.158 10.07 10.07 41.64 3.51
55 56 0.177141 CGCTCCCCGAAACCTAATCA 59.823 55.000 0.00 0.00 40.02 2.57
58 59 0.913924 TCCCCGAAACCTAATCACCC 59.086 55.000 0.00 0.00 0.00 4.61
64 66 2.158943 CGAAACCTAATCACCCTCTCCC 60.159 54.545 0.00 0.00 0.00 4.30
70 72 3.580458 CCTAATCACCCTCTCCCATACAG 59.420 52.174 0.00 0.00 0.00 2.74
72 74 1.015609 TCACCCTCTCCCATACAGGA 58.984 55.000 0.00 0.00 41.22 3.86
75 77 1.132689 ACCCTCTCCCATACAGGATCC 60.133 57.143 2.48 2.48 41.22 3.36
77 79 1.203063 CCTCTCCCATACAGGATCCGA 60.203 57.143 5.98 0.00 41.22 4.55
93 95 3.839432 GAAGAGGCGGGGTCTCGG 61.839 72.222 0.00 0.00 39.53 4.63
107 109 4.067512 TCGGAGGCCTGCTCTCCT 62.068 66.667 23.05 0.00 46.43 3.69
110 112 2.297129 GGAGGCCTGCTCTCCTGTT 61.297 63.158 18.47 0.00 45.46 3.16
111 113 1.078567 GAGGCCTGCTCTCCTGTTG 60.079 63.158 12.00 0.00 31.71 3.33
114 116 1.376553 GCCTGCTCTCCTGTTGACC 60.377 63.158 0.00 0.00 0.00 4.02
116 118 1.739562 CTGCTCTCCTGTTGACCGC 60.740 63.158 0.00 0.00 0.00 5.68
122 124 3.475774 CCTGTTGACCGCGTACGC 61.476 66.667 29.83 29.83 38.22 4.42
144 146 2.421739 GACGGGATGGGATCACCG 59.578 66.667 0.00 0.00 44.64 4.94
145 147 3.161450 ACGGGATGGGATCACCGG 61.161 66.667 0.00 0.00 43.11 5.28
146 148 3.161450 CGGGATGGGATCACCGGT 61.161 66.667 0.00 0.00 44.64 5.28
160 162 4.034258 CGGTGGCAGCAACAGCAG 62.034 66.667 17.80 0.00 36.19 4.24
167 169 0.039708 GCAGCAACAGCAGAAGGAAC 60.040 55.000 0.00 0.00 0.00 3.62
172 174 1.528586 CAACAGCAGAAGGAACGACAG 59.471 52.381 0.00 0.00 0.00 3.51
175 177 0.601311 AGCAGAAGGAACGACAGTGC 60.601 55.000 0.00 0.00 0.00 4.40
176 178 1.891060 GCAGAAGGAACGACAGTGCG 61.891 60.000 5.58 5.58 37.29 5.34
179 181 3.785189 AAGGAACGACAGTGCGCGT 62.785 57.895 8.43 5.88 43.39 6.01
180 182 4.059459 GGAACGACAGTGCGCGTG 62.059 66.667 8.43 5.31 41.06 5.34
181 183 4.059459 GAACGACAGTGCGCGTGG 62.059 66.667 8.43 4.63 41.06 4.94
182 184 4.578898 AACGACAGTGCGCGTGGA 62.579 61.111 8.43 0.00 41.06 4.02
191 202 3.737172 GCGCGTGGAGGCAAATGT 61.737 61.111 8.43 0.00 0.00 2.71
195 206 0.099436 GCGTGGAGGCAAATGTGATC 59.901 55.000 0.00 0.00 0.00 2.92
200 211 3.256631 GTGGAGGCAAATGTGATCTGTTT 59.743 43.478 0.00 0.00 0.00 2.83
201 212 3.256383 TGGAGGCAAATGTGATCTGTTTG 59.744 43.478 11.28 11.28 36.26 2.93
202 213 3.367703 GGAGGCAAATGTGATCTGTTTGG 60.368 47.826 15.05 0.00 34.34 3.28
207 218 2.183478 ATGTGATCTGTTTGGCGTGA 57.817 45.000 0.00 0.00 0.00 4.35
222 233 2.925706 TGACGGCTAGGGTTGGCA 60.926 61.111 0.00 0.00 31.41 4.92
223 234 2.125106 GACGGCTAGGGTTGGCAG 60.125 66.667 0.00 0.00 31.41 4.85
248 259 4.640789 CCTCAGATATATAGGCACGTCC 57.359 50.000 0.00 0.00 0.00 4.79
249 260 4.017126 CCTCAGATATATAGGCACGTCCA 58.983 47.826 6.78 0.00 37.29 4.02
250 261 4.142359 CCTCAGATATATAGGCACGTCCAC 60.142 50.000 6.78 0.00 37.29 4.02
266 277 1.544825 CCACGTGGAGAGATGTGGGT 61.545 60.000 31.31 0.00 45.76 4.51
269 280 0.608130 CGTGGAGAGATGTGGGTTGA 59.392 55.000 0.00 0.00 0.00 3.18
273 284 1.351017 GGAGAGATGTGGGTTGAACCA 59.649 52.381 17.27 0.00 41.02 3.67
281 293 0.107081 TGGGTTGAACCACGTTCGAT 59.893 50.000 17.27 0.00 44.55 3.59
286 298 3.058501 GGTTGAACCACGTTCGATTCAAT 60.059 43.478 9.98 0.00 44.55 2.57
287 299 3.804518 TGAACCACGTTCGATTCAATG 57.195 42.857 0.00 0.00 44.55 2.82
289 301 3.185594 TGAACCACGTTCGATTCAATGAC 59.814 43.478 0.00 0.00 44.55 3.06
292 304 2.736721 CCACGTTCGATTCAATGACAGT 59.263 45.455 0.00 0.00 0.00 3.55
294 306 2.993899 ACGTTCGATTCAATGACAGTCC 59.006 45.455 0.00 0.00 0.00 3.85
296 308 3.618594 CGTTCGATTCAATGACAGTCCAT 59.381 43.478 0.00 0.00 0.00 3.41
301 313 4.212847 CGATTCAATGACAGTCCATGATCC 59.787 45.833 0.00 0.00 0.00 3.36
309 321 1.135139 CAGTCCATGATCCGACGTCTT 59.865 52.381 14.70 0.00 34.10 3.01
315 327 3.483734 CATGATCCGACGTCTTAGATCG 58.516 50.000 23.50 13.55 38.36 3.69
316 328 2.558378 TGATCCGACGTCTTAGATCGT 58.442 47.619 23.50 8.95 43.00 3.73
317 329 2.287103 TGATCCGACGTCTTAGATCGTG 59.713 50.000 23.50 5.36 40.39 4.35
320 332 0.591741 CGACGTCTTAGATCGTGGCC 60.592 60.000 14.70 0.00 40.39 5.36
322 334 0.968901 ACGTCTTAGATCGTGGCCCA 60.969 55.000 0.00 0.00 38.85 5.36
323 335 0.249073 CGTCTTAGATCGTGGCCCAG 60.249 60.000 0.00 0.00 0.00 4.45
324 336 0.824759 GTCTTAGATCGTGGCCCAGT 59.175 55.000 0.00 0.00 0.00 4.00
327 339 1.207089 CTTAGATCGTGGCCCAGTTGA 59.793 52.381 0.00 0.00 0.00 3.18
328 340 0.535335 TAGATCGTGGCCCAGTTGAC 59.465 55.000 0.00 0.00 0.00 3.18
331 343 0.179004 ATCGTGGCCCAGTTGACAAA 60.179 50.000 0.00 0.00 0.00 2.83
332 344 0.394488 TCGTGGCCCAGTTGACAAAA 60.394 50.000 0.00 0.00 0.00 2.44
335 347 1.480545 GTGGCCCAGTTGACAAAAACT 59.519 47.619 0.00 0.00 41.08 2.66
337 349 1.068588 GGCCCAGTTGACAAAAACTCC 59.931 52.381 0.00 0.00 38.34 3.85
338 350 2.031870 GCCCAGTTGACAAAAACTCCT 58.968 47.619 0.00 0.00 38.34 3.69
340 352 3.287222 CCCAGTTGACAAAAACTCCTCA 58.713 45.455 0.00 0.00 38.34 3.86
341 353 3.699038 CCCAGTTGACAAAAACTCCTCAA 59.301 43.478 0.00 0.00 38.34 3.02
350 362 2.770164 AAACTCCTCAATCCTGACCG 57.230 50.000 0.00 0.00 0.00 4.79
353 365 1.612146 TCCTCAATCCTGACCGGCA 60.612 57.895 0.00 0.00 0.00 5.69
358 370 2.493278 CTCAATCCTGACCGGCAAAAAT 59.507 45.455 0.00 0.00 0.00 1.82
363 375 1.467374 CCTGACCGGCAAAAATAAGCG 60.467 52.381 0.00 0.00 0.00 4.68
369 381 2.032799 CCGGCAAAAATAAGCGCATAGA 59.967 45.455 11.47 0.00 0.00 1.98
392 409 0.876342 GAGCTTACCTCATTCCCGCG 60.876 60.000 0.00 0.00 40.45 6.46
394 411 0.249911 GCTTACCTCATTCCCGCGAT 60.250 55.000 8.23 0.00 0.00 4.58
395 412 1.502231 CTTACCTCATTCCCGCGATG 58.498 55.000 8.23 3.27 0.00 3.84
396 413 0.828022 TTACCTCATTCCCGCGATGT 59.172 50.000 8.23 0.00 0.00 3.06
397 414 0.104120 TACCTCATTCCCGCGATGTG 59.896 55.000 8.23 4.42 0.00 3.21
398 415 1.153369 CCTCATTCCCGCGATGTGT 60.153 57.895 8.23 0.00 0.00 3.72
399 416 1.154205 CCTCATTCCCGCGATGTGTC 61.154 60.000 8.23 0.00 0.00 3.67
408 425 3.168271 CGATGTGTCGTGGCAAGG 58.832 61.111 0.00 0.00 42.78 3.61
409 426 2.870372 GATGTGTCGTGGCAAGGC 59.130 61.111 0.00 0.00 0.00 4.35
410 427 1.965930 GATGTGTCGTGGCAAGGCA 60.966 57.895 2.92 2.92 0.00 4.75
411 428 1.915614 GATGTGTCGTGGCAAGGCAG 61.916 60.000 8.25 0.00 0.00 4.85
412 429 3.357079 GTGTCGTGGCAAGGCAGG 61.357 66.667 8.25 9.68 0.00 4.85
422 439 4.329545 AAGGCAGGCGGCGAAGAA 62.330 61.111 12.98 0.00 46.16 2.52
423 440 4.767255 AGGCAGGCGGCGAAGAAG 62.767 66.667 12.98 0.00 46.16 2.85
425 442 4.760047 GCAGGCGGCGAAGAAGGA 62.760 66.667 12.98 0.00 0.00 3.36
426 443 2.510238 CAGGCGGCGAAGAAGGAG 60.510 66.667 12.98 0.00 0.00 3.69
427 444 4.459089 AGGCGGCGAAGAAGGAGC 62.459 66.667 12.98 0.00 0.00 4.70
433 450 4.129737 CGAAGAAGGAGCGCGGGA 62.130 66.667 8.83 0.00 0.00 5.14
434 451 2.264794 GAAGAAGGAGCGCGGGAA 59.735 61.111 8.83 0.00 0.00 3.97
435 452 2.047179 AAGAAGGAGCGCGGGAAC 60.047 61.111 8.83 0.00 0.00 3.62
436 453 2.781595 GAAGAAGGAGCGCGGGAACA 62.782 60.000 8.83 0.00 0.00 3.18
437 454 2.125106 GAAGGAGCGCGGGAACAT 60.125 61.111 8.83 0.00 0.00 2.71
438 455 1.745489 GAAGGAGCGCGGGAACATT 60.745 57.895 8.83 0.00 0.00 2.71
439 456 1.303317 AAGGAGCGCGGGAACATTT 60.303 52.632 8.83 0.00 0.00 2.32
440 457 1.305930 AAGGAGCGCGGGAACATTTC 61.306 55.000 8.83 0.00 0.00 2.17
441 458 1.745489 GGAGCGCGGGAACATTTCT 60.745 57.895 8.83 0.00 0.00 2.52
442 459 1.706287 GGAGCGCGGGAACATTTCTC 61.706 60.000 8.83 1.75 0.00 2.87
443 460 0.741221 GAGCGCGGGAACATTTCTCT 60.741 55.000 8.83 0.00 0.00 3.10
444 461 0.321653 AGCGCGGGAACATTTCTCTT 60.322 50.000 8.83 0.00 0.00 2.85
445 462 0.097150 GCGCGGGAACATTTCTCTTC 59.903 55.000 8.83 0.00 0.00 2.87
446 463 1.726853 CGCGGGAACATTTCTCTTCT 58.273 50.000 0.00 0.00 0.00 2.85
447 464 1.661112 CGCGGGAACATTTCTCTTCTC 59.339 52.381 0.00 0.00 0.00 2.87
448 465 2.699954 GCGGGAACATTTCTCTTCTCA 58.300 47.619 0.00 0.00 0.00 3.27
449 466 3.074412 GCGGGAACATTTCTCTTCTCAA 58.926 45.455 0.00 0.00 0.00 3.02
450 467 3.126000 GCGGGAACATTTCTCTTCTCAAG 59.874 47.826 0.00 0.00 0.00 3.02
451 468 3.126000 CGGGAACATTTCTCTTCTCAAGC 59.874 47.826 0.00 0.00 0.00 4.01
452 469 4.331108 GGGAACATTTCTCTTCTCAAGCT 58.669 43.478 0.00 0.00 0.00 3.74
453 470 4.394610 GGGAACATTTCTCTTCTCAAGCTC 59.605 45.833 0.00 0.00 0.00 4.09
454 471 4.394610 GGAACATTTCTCTTCTCAAGCTCC 59.605 45.833 0.00 0.00 0.00 4.70
455 472 4.630644 ACATTTCTCTTCTCAAGCTCCA 57.369 40.909 0.00 0.00 0.00 3.86
456 473 4.978099 ACATTTCTCTTCTCAAGCTCCAA 58.022 39.130 0.00 0.00 0.00 3.53
457 474 5.568392 ACATTTCTCTTCTCAAGCTCCAAT 58.432 37.500 0.00 0.00 0.00 3.16
458 475 6.715280 ACATTTCTCTTCTCAAGCTCCAATA 58.285 36.000 0.00 0.00 0.00 1.90
459 476 6.822676 ACATTTCTCTTCTCAAGCTCCAATAG 59.177 38.462 0.00 0.00 0.00 1.73
471 488 3.344904 CTCCAATAGCATGCGGAAAAG 57.655 47.619 13.01 3.42 0.00 2.27
472 489 2.945008 CTCCAATAGCATGCGGAAAAGA 59.055 45.455 13.01 5.67 0.00 2.52
473 490 3.351740 TCCAATAGCATGCGGAAAAGAA 58.648 40.909 13.01 0.00 0.00 2.52
474 491 3.953612 TCCAATAGCATGCGGAAAAGAAT 59.046 39.130 13.01 0.00 0.00 2.40
475 492 4.036734 TCCAATAGCATGCGGAAAAGAATC 59.963 41.667 13.01 0.00 0.00 2.52
476 493 4.293415 CAATAGCATGCGGAAAAGAATCC 58.707 43.478 13.01 0.00 36.05 3.01
477 494 1.106285 AGCATGCGGAAAAGAATCCC 58.894 50.000 13.01 0.00 36.00 3.85
478 495 1.106285 GCATGCGGAAAAGAATCCCT 58.894 50.000 0.00 0.00 36.00 4.20
479 496 1.478105 GCATGCGGAAAAGAATCCCTT 59.522 47.619 0.00 0.00 36.00 3.95
480 497 2.687935 GCATGCGGAAAAGAATCCCTTA 59.312 45.455 0.00 0.00 36.00 2.69
481 498 3.319122 GCATGCGGAAAAGAATCCCTTAT 59.681 43.478 0.00 0.00 36.00 1.73
482 499 4.518970 GCATGCGGAAAAGAATCCCTTATA 59.481 41.667 0.00 0.00 36.00 0.98
483 500 5.009610 GCATGCGGAAAAGAATCCCTTATAA 59.990 40.000 0.00 0.00 36.00 0.98
484 501 6.438763 CATGCGGAAAAGAATCCCTTATAAC 58.561 40.000 0.00 0.00 36.00 1.89
485 502 4.573201 TGCGGAAAAGAATCCCTTATAACG 59.427 41.667 0.00 0.00 36.00 3.18
486 503 4.812626 GCGGAAAAGAATCCCTTATAACGA 59.187 41.667 0.00 0.00 36.00 3.85
487 504 5.050295 GCGGAAAAGAATCCCTTATAACGAG 60.050 44.000 0.00 0.00 36.00 4.18
488 505 5.465724 CGGAAAAGAATCCCTTATAACGAGG 59.534 44.000 0.00 0.00 36.00 4.63
489 506 6.354938 GGAAAAGAATCCCTTATAACGAGGT 58.645 40.000 0.00 0.00 34.00 3.85
490 507 6.482641 GGAAAAGAATCCCTTATAACGAGGTC 59.517 42.308 0.00 0.00 34.00 3.85
491 508 5.548181 AAGAATCCCTTATAACGAGGTCC 57.452 43.478 0.00 0.00 32.24 4.46
492 509 4.553678 AGAATCCCTTATAACGAGGTCCA 58.446 43.478 0.00 0.00 32.15 4.02
493 510 4.966805 AGAATCCCTTATAACGAGGTCCAA 59.033 41.667 0.00 0.00 32.15 3.53
494 511 4.684484 ATCCCTTATAACGAGGTCCAAC 57.316 45.455 0.00 0.00 32.15 3.77
495 512 3.716431 TCCCTTATAACGAGGTCCAACT 58.284 45.455 0.00 0.00 32.15 3.16
496 513 3.703052 TCCCTTATAACGAGGTCCAACTC 59.297 47.826 0.00 0.00 32.15 3.01
497 514 3.181468 CCCTTATAACGAGGTCCAACTCC 60.181 52.174 0.00 0.00 33.93 3.85
498 515 3.705072 CCTTATAACGAGGTCCAACTCCT 59.295 47.826 0.00 0.00 38.09 3.69
499 516 4.202131 CCTTATAACGAGGTCCAACTCCTC 60.202 50.000 0.00 2.27 45.56 3.71
500 517 2.599408 TAACGAGGTCCAACTCCTCT 57.401 50.000 9.74 0.00 46.49 3.69
501 518 2.599408 AACGAGGTCCAACTCCTCTA 57.401 50.000 9.74 0.00 46.49 2.43
502 519 1.836802 ACGAGGTCCAACTCCTCTAC 58.163 55.000 9.74 0.00 46.49 2.59
503 520 1.075050 ACGAGGTCCAACTCCTCTACA 59.925 52.381 9.74 0.00 46.49 2.74
504 521 2.168496 CGAGGTCCAACTCCTCTACAA 58.832 52.381 9.74 0.00 46.49 2.41
505 522 2.094649 CGAGGTCCAACTCCTCTACAAC 60.095 54.545 9.74 0.00 46.49 3.32
506 523 3.166679 GAGGTCCAACTCCTCTACAACT 58.833 50.000 4.91 0.00 45.56 3.16
507 524 4.342359 GAGGTCCAACTCCTCTACAACTA 58.658 47.826 4.91 0.00 45.56 2.24
508 525 4.345854 AGGTCCAACTCCTCTACAACTAG 58.654 47.826 0.00 0.00 0.00 2.57
509 526 3.119065 GGTCCAACTCCTCTACAACTAGC 60.119 52.174 0.00 0.00 0.00 3.42
510 527 2.753452 TCCAACTCCTCTACAACTAGCG 59.247 50.000 0.00 0.00 0.00 4.26
511 528 2.159226 CCAACTCCTCTACAACTAGCGG 60.159 54.545 0.00 0.00 0.00 5.52
512 529 1.104630 ACTCCTCTACAACTAGCGGC 58.895 55.000 0.00 0.00 0.00 6.53
513 530 1.103803 CTCCTCTACAACTAGCGGCA 58.896 55.000 1.45 0.00 0.00 5.69
514 531 1.683917 CTCCTCTACAACTAGCGGCAT 59.316 52.381 1.45 0.00 0.00 4.40
515 532 1.409064 TCCTCTACAACTAGCGGCATG 59.591 52.381 1.45 0.00 0.00 4.06
516 533 1.409064 CCTCTACAACTAGCGGCATGA 59.591 52.381 1.45 0.00 0.00 3.07
517 534 2.544694 CCTCTACAACTAGCGGCATGAG 60.545 54.545 1.45 0.00 0.00 2.90
518 535 2.359214 CTCTACAACTAGCGGCATGAGA 59.641 50.000 1.45 1.24 0.00 3.27
519 536 2.959030 TCTACAACTAGCGGCATGAGAT 59.041 45.455 1.45 0.00 0.00 2.75
520 537 2.698855 ACAACTAGCGGCATGAGATT 57.301 45.000 1.45 0.00 0.00 2.40
521 538 3.819564 ACAACTAGCGGCATGAGATTA 57.180 42.857 1.45 0.00 0.00 1.75
522 539 4.137116 ACAACTAGCGGCATGAGATTAA 57.863 40.909 1.45 0.00 0.00 1.40
523 540 4.513442 ACAACTAGCGGCATGAGATTAAA 58.487 39.130 1.45 0.00 0.00 1.52
524 541 4.332819 ACAACTAGCGGCATGAGATTAAAC 59.667 41.667 1.45 0.00 0.00 2.01
525 542 4.408182 ACTAGCGGCATGAGATTAAACT 57.592 40.909 1.45 0.00 0.00 2.66
526 543 4.770795 ACTAGCGGCATGAGATTAAACTT 58.229 39.130 1.45 0.00 0.00 2.66
527 544 4.811557 ACTAGCGGCATGAGATTAAACTTC 59.188 41.667 1.45 0.00 0.00 3.01
528 545 3.609853 AGCGGCATGAGATTAAACTTCA 58.390 40.909 1.45 0.00 0.00 3.02
529 546 3.375299 AGCGGCATGAGATTAAACTTCAC 59.625 43.478 1.45 0.00 0.00 3.18
530 547 3.126858 GCGGCATGAGATTAAACTTCACA 59.873 43.478 0.00 0.00 0.00 3.58
531 548 4.651994 CGGCATGAGATTAAACTTCACAC 58.348 43.478 0.00 0.00 0.00 3.82
532 549 4.437390 CGGCATGAGATTAAACTTCACACC 60.437 45.833 0.00 0.00 0.00 4.16
533 550 4.458989 GGCATGAGATTAAACTTCACACCA 59.541 41.667 0.00 0.00 0.00 4.17
534 551 5.393962 GCATGAGATTAAACTTCACACCAC 58.606 41.667 0.00 0.00 0.00 4.16
535 552 5.048782 GCATGAGATTAAACTTCACACCACA 60.049 40.000 0.00 0.00 0.00 4.17
536 553 6.373779 CATGAGATTAAACTTCACACCACAC 58.626 40.000 0.00 0.00 0.00 3.82
537 554 4.819630 TGAGATTAAACTTCACACCACACC 59.180 41.667 0.00 0.00 0.00 4.16
538 555 5.048846 AGATTAAACTTCACACCACACCT 57.951 39.130 0.00 0.00 0.00 4.00
539 556 5.445964 AGATTAAACTTCACACCACACCTT 58.554 37.500 0.00 0.00 0.00 3.50
540 557 5.891551 AGATTAAACTTCACACCACACCTTT 59.108 36.000 0.00 0.00 0.00 3.11
541 558 5.986501 TTAAACTTCACACCACACCTTTT 57.013 34.783 0.00 0.00 0.00 2.27
542 559 4.882842 AAACTTCACACCACACCTTTTT 57.117 36.364 0.00 0.00 0.00 1.94
564 581 7.739498 TTTTTAGAATACTTCTCACCACACC 57.261 36.000 0.00 0.00 41.14 4.16
565 582 6.681729 TTTAGAATACTTCTCACCACACCT 57.318 37.500 0.00 0.00 41.14 4.00
566 583 7.786046 TTTAGAATACTTCTCACCACACCTA 57.214 36.000 0.00 0.00 41.14 3.08
567 584 7.786046 TTAGAATACTTCTCACCACACCTAA 57.214 36.000 0.00 0.00 41.14 2.69
568 585 6.875972 AGAATACTTCTCACCACACCTAAT 57.124 37.500 0.00 0.00 34.07 1.73
569 586 6.644347 AGAATACTTCTCACCACACCTAATG 58.356 40.000 0.00 0.00 34.07 1.90
570 587 3.059352 ACTTCTCACCACACCTAATGC 57.941 47.619 0.00 0.00 0.00 3.56
571 588 2.290323 ACTTCTCACCACACCTAATGCC 60.290 50.000 0.00 0.00 0.00 4.40
572 589 1.357137 TCTCACCACACCTAATGCCA 58.643 50.000 0.00 0.00 0.00 4.92
573 590 1.915489 TCTCACCACACCTAATGCCAT 59.085 47.619 0.00 0.00 0.00 4.40
574 591 3.111484 TCTCACCACACCTAATGCCATA 58.889 45.455 0.00 0.00 0.00 2.74
575 592 3.716353 TCTCACCACACCTAATGCCATAT 59.284 43.478 0.00 0.00 0.00 1.78
576 593 4.904853 TCTCACCACACCTAATGCCATATA 59.095 41.667 0.00 0.00 0.00 0.86
577 594 5.368230 TCTCACCACACCTAATGCCATATAA 59.632 40.000 0.00 0.00 0.00 0.98
578 595 5.373222 TCACCACACCTAATGCCATATAAC 58.627 41.667 0.00 0.00 0.00 1.89
579 596 4.518970 CACCACACCTAATGCCATATAACC 59.481 45.833 0.00 0.00 0.00 2.85
580 597 4.079253 CCACACCTAATGCCATATAACCC 58.921 47.826 0.00 0.00 0.00 4.11
581 598 4.447034 CCACACCTAATGCCATATAACCCA 60.447 45.833 0.00 0.00 0.00 4.51
582 599 4.518970 CACACCTAATGCCATATAACCCAC 59.481 45.833 0.00 0.00 0.00 4.61
583 600 4.167113 ACACCTAATGCCATATAACCCACA 59.833 41.667 0.00 0.00 0.00 4.17
584 601 4.518970 CACCTAATGCCATATAACCCACAC 59.481 45.833 0.00 0.00 0.00 3.82
585 602 4.167113 ACCTAATGCCATATAACCCACACA 59.833 41.667 0.00 0.00 0.00 3.72
586 603 4.761739 CCTAATGCCATATAACCCACACAG 59.238 45.833 0.00 0.00 0.00 3.66
587 604 2.727123 TGCCATATAACCCACACAGG 57.273 50.000 0.00 0.00 37.03 4.00
588 605 1.318576 GCCATATAACCCACACAGGC 58.681 55.000 0.00 0.00 35.39 4.85
589 606 1.981256 CCATATAACCCACACAGGCC 58.019 55.000 0.00 0.00 35.39 5.19
590 607 1.494721 CCATATAACCCACACAGGCCT 59.505 52.381 0.00 0.00 35.39 5.19
591 608 2.091885 CCATATAACCCACACAGGCCTT 60.092 50.000 0.00 0.00 35.39 4.35
592 609 3.627237 CCATATAACCCACACAGGCCTTT 60.627 47.826 0.00 0.00 35.39 3.11
593 610 4.385865 CCATATAACCCACACAGGCCTTTA 60.386 45.833 0.00 0.00 35.39 1.85
594 611 2.871096 TAACCCACACAGGCCTTTAG 57.129 50.000 0.00 0.00 35.39 1.85
595 612 1.145571 AACCCACACAGGCCTTTAGA 58.854 50.000 0.00 0.00 35.39 2.10
596 613 0.693049 ACCCACACAGGCCTTTAGAG 59.307 55.000 0.00 0.00 35.39 2.43
597 614 0.984230 CCCACACAGGCCTTTAGAGA 59.016 55.000 0.00 0.00 35.39 3.10
598 615 1.561542 CCCACACAGGCCTTTAGAGAT 59.438 52.381 0.00 0.00 35.39 2.75
599 616 2.025887 CCCACACAGGCCTTTAGAGATT 60.026 50.000 0.00 0.00 35.39 2.40
600 617 3.562176 CCCACACAGGCCTTTAGAGATTT 60.562 47.826 0.00 0.00 35.39 2.17
601 618 4.082125 CCACACAGGCCTTTAGAGATTTT 58.918 43.478 0.00 0.00 0.00 1.82
602 619 4.156739 CCACACAGGCCTTTAGAGATTTTC 59.843 45.833 0.00 0.00 0.00 2.29
603 620 5.006386 CACACAGGCCTTTAGAGATTTTCT 58.994 41.667 0.00 0.00 40.06 2.52
604 621 5.006386 ACACAGGCCTTTAGAGATTTTCTG 58.994 41.667 0.00 0.00 36.61 3.02
605 622 5.221925 ACACAGGCCTTTAGAGATTTTCTGA 60.222 40.000 0.00 0.00 36.61 3.27
606 623 5.707298 CACAGGCCTTTAGAGATTTTCTGAA 59.293 40.000 0.00 0.00 36.61 3.02
607 624 6.207417 CACAGGCCTTTAGAGATTTTCTGAAA 59.793 38.462 0.00 0.00 36.61 2.69
608 625 6.950619 ACAGGCCTTTAGAGATTTTCTGAAAT 59.049 34.615 0.00 0.00 38.16 2.17
609 626 7.452813 ACAGGCCTTTAGAGATTTTCTGAAATT 59.547 33.333 0.00 0.23 35.65 1.82
610 627 7.758528 CAGGCCTTTAGAGATTTTCTGAAATTG 59.241 37.037 0.00 0.00 35.65 2.32
611 628 7.452813 AGGCCTTTAGAGATTTTCTGAAATTGT 59.547 33.333 0.00 0.00 35.65 2.71
612 629 8.090831 GGCCTTTAGAGATTTTCTGAAATTGTT 58.909 33.333 3.31 0.00 35.65 2.83
618 635 7.824672 AGAGATTTTCTGAAATTGTTAGCTGG 58.175 34.615 3.31 0.00 35.65 4.85
619 636 6.928520 AGATTTTCTGAAATTGTTAGCTGGG 58.071 36.000 3.31 0.00 35.65 4.45
620 637 4.519540 TTTCTGAAATTGTTAGCTGGGC 57.480 40.909 0.00 0.00 0.00 5.36
621 638 3.439857 TCTGAAATTGTTAGCTGGGCT 57.560 42.857 0.00 0.00 43.41 5.19
622 639 3.766545 TCTGAAATTGTTAGCTGGGCTT 58.233 40.909 0.00 0.00 40.44 4.35
623 640 4.151883 TCTGAAATTGTTAGCTGGGCTTT 58.848 39.130 0.00 0.00 40.44 3.51
624 641 5.321102 TCTGAAATTGTTAGCTGGGCTTTA 58.679 37.500 0.00 0.00 40.44 1.85
625 642 5.415701 TCTGAAATTGTTAGCTGGGCTTTAG 59.584 40.000 0.00 0.00 40.44 1.85
626 643 4.462483 TGAAATTGTTAGCTGGGCTTTAGG 59.538 41.667 0.00 0.00 40.44 2.69
627 644 1.834188 TTGTTAGCTGGGCTTTAGGC 58.166 50.000 0.00 0.00 40.44 3.93
645 662 3.910989 AGGCCCACCCTAATATTTCAAC 58.089 45.455 0.00 0.00 44.08 3.18
646 663 3.270960 AGGCCCACCCTAATATTTCAACA 59.729 43.478 0.00 0.00 44.08 3.33
647 664 4.027437 GGCCCACCCTAATATTTCAACAA 58.973 43.478 0.00 0.00 0.00 2.83
648 665 4.099419 GGCCCACCCTAATATTTCAACAAG 59.901 45.833 0.00 0.00 0.00 3.16
649 666 4.099419 GCCCACCCTAATATTTCAACAAGG 59.901 45.833 0.00 0.00 0.00 3.61
650 667 5.515106 CCCACCCTAATATTTCAACAAGGA 58.485 41.667 0.00 0.00 0.00 3.36
651 668 6.136155 CCCACCCTAATATTTCAACAAGGAT 58.864 40.000 0.00 0.00 0.00 3.24
652 669 7.294584 CCCACCCTAATATTTCAACAAGGATA 58.705 38.462 0.00 0.00 0.00 2.59
653 670 7.782644 CCCACCCTAATATTTCAACAAGGATAA 59.217 37.037 0.00 0.00 0.00 1.75
654 671 8.630037 CCACCCTAATATTTCAACAAGGATAAC 58.370 37.037 0.00 0.00 0.00 1.89
655 672 8.342634 CACCCTAATATTTCAACAAGGATAACG 58.657 37.037 0.00 0.00 0.00 3.18
656 673 8.269317 ACCCTAATATTTCAACAAGGATAACGA 58.731 33.333 0.00 0.00 0.00 3.85
657 674 9.284968 CCCTAATATTTCAACAAGGATAACGAT 57.715 33.333 0.00 0.00 0.00 3.73
659 676 9.599322 CTAATATTTCAACAAGGATAACGATGC 57.401 33.333 0.00 0.00 0.00 3.91
660 677 5.895636 ATTTCAACAAGGATAACGATGCA 57.104 34.783 0.00 0.00 0.00 3.96
661 678 5.895636 TTTCAACAAGGATAACGATGCAT 57.104 34.783 0.00 0.00 0.00 3.96
662 679 5.895636 TTCAACAAGGATAACGATGCATT 57.104 34.783 0.00 0.00 0.00 3.56
663 680 5.233957 TCAACAAGGATAACGATGCATTG 57.766 39.130 12.66 12.66 0.00 2.82
664 681 4.096231 TCAACAAGGATAACGATGCATTGG 59.904 41.667 18.31 7.94 0.00 3.16
665 682 2.358898 ACAAGGATAACGATGCATTGGC 59.641 45.455 18.31 4.63 41.68 4.52
666 683 1.229428 AGGATAACGATGCATTGGCG 58.771 50.000 18.31 11.51 45.35 5.69
667 684 1.202639 AGGATAACGATGCATTGGCGA 60.203 47.619 18.31 3.23 45.35 5.54
668 685 1.069906 GGATAACGATGCATTGGCGAC 60.070 52.381 18.31 6.85 45.35 5.19
669 686 1.867233 GATAACGATGCATTGGCGACT 59.133 47.619 18.31 5.17 45.35 4.18
670 687 1.286501 TAACGATGCATTGGCGACTC 58.713 50.000 18.31 0.00 45.35 3.36
671 688 0.673333 AACGATGCATTGGCGACTCA 60.673 50.000 18.31 0.00 45.35 3.41
672 689 0.462581 ACGATGCATTGGCGACTCAT 60.463 50.000 18.31 0.00 45.35 2.90
673 690 0.659427 CGATGCATTGGCGACTCATT 59.341 50.000 5.98 0.00 45.35 2.57
674 691 1.596220 CGATGCATTGGCGACTCATTG 60.596 52.381 5.98 0.00 45.35 2.82
675 692 1.402968 GATGCATTGGCGACTCATTGT 59.597 47.619 0.00 0.00 45.35 2.71
676 693 2.106477 TGCATTGGCGACTCATTGTA 57.894 45.000 0.00 0.00 45.35 2.41
677 694 2.009051 TGCATTGGCGACTCATTGTAG 58.991 47.619 0.00 0.00 45.35 2.74
678 695 1.331756 GCATTGGCGACTCATTGTAGG 59.668 52.381 0.00 0.00 0.00 3.18
679 696 1.942657 CATTGGCGACTCATTGTAGGG 59.057 52.381 0.00 0.00 0.00 3.53
680 697 0.392461 TTGGCGACTCATTGTAGGGC 60.392 55.000 0.00 0.00 0.00 5.19
681 698 1.523938 GGCGACTCATTGTAGGGCC 60.524 63.158 0.00 0.00 34.18 5.80
682 699 1.220749 GCGACTCATTGTAGGGCCA 59.779 57.895 6.18 0.00 0.00 5.36
683 700 0.811616 GCGACTCATTGTAGGGCCAG 60.812 60.000 6.18 0.00 0.00 4.85
684 701 0.537188 CGACTCATTGTAGGGCCAGT 59.463 55.000 6.18 0.00 0.00 4.00
685 702 1.754803 CGACTCATTGTAGGGCCAGTA 59.245 52.381 6.18 0.00 0.00 2.74
686 703 2.223829 CGACTCATTGTAGGGCCAGTAG 60.224 54.545 6.18 0.00 0.00 2.57
687 704 2.766828 GACTCATTGTAGGGCCAGTAGT 59.233 50.000 6.18 0.00 0.00 2.73
688 705 2.501723 ACTCATTGTAGGGCCAGTAGTG 59.498 50.000 6.18 0.00 0.00 2.74
690 707 1.559682 CATTGTAGGGCCAGTAGTGGT 59.440 52.381 18.02 0.92 46.96 4.16
691 708 1.737199 TTGTAGGGCCAGTAGTGGTT 58.263 50.000 18.02 6.99 46.96 3.67
692 709 0.981183 TGTAGGGCCAGTAGTGGTTG 59.019 55.000 18.02 0.00 46.96 3.77
693 710 0.981943 GTAGGGCCAGTAGTGGTTGT 59.018 55.000 18.02 5.36 46.96 3.32
694 711 1.350019 GTAGGGCCAGTAGTGGTTGTT 59.650 52.381 18.02 4.66 46.96 2.83
695 712 0.400594 AGGGCCAGTAGTGGTTGTTC 59.599 55.000 18.02 0.64 46.96 3.18
696 713 0.953960 GGGCCAGTAGTGGTTGTTCG 60.954 60.000 18.02 0.00 46.96 3.95
697 714 0.953960 GGCCAGTAGTGGTTGTTCGG 60.954 60.000 18.02 0.00 46.96 4.30
698 715 0.250166 GCCAGTAGTGGTTGTTCGGT 60.250 55.000 18.02 0.00 46.96 4.69
699 716 1.508632 CCAGTAGTGGTTGTTCGGTG 58.491 55.000 8.59 0.00 39.30 4.94
700 717 1.508632 CAGTAGTGGTTGTTCGGTGG 58.491 55.000 0.00 0.00 0.00 4.61
701 718 1.125633 AGTAGTGGTTGTTCGGTGGT 58.874 50.000 0.00 0.00 0.00 4.16
702 719 1.069668 AGTAGTGGTTGTTCGGTGGTC 59.930 52.381 0.00 0.00 0.00 4.02
703 720 1.069668 GTAGTGGTTGTTCGGTGGTCT 59.930 52.381 0.00 0.00 0.00 3.85
704 721 1.416243 AGTGGTTGTTCGGTGGTCTA 58.584 50.000 0.00 0.00 0.00 2.59
705 722 1.343465 AGTGGTTGTTCGGTGGTCTAG 59.657 52.381 0.00 0.00 0.00 2.43
706 723 1.342174 GTGGTTGTTCGGTGGTCTAGA 59.658 52.381 0.00 0.00 0.00 2.43
707 724 2.040939 TGGTTGTTCGGTGGTCTAGAA 58.959 47.619 0.00 0.00 0.00 2.10
708 725 2.435069 TGGTTGTTCGGTGGTCTAGAAA 59.565 45.455 0.00 0.00 0.00 2.52
709 726 3.071892 TGGTTGTTCGGTGGTCTAGAAAT 59.928 43.478 0.00 0.00 0.00 2.17
710 727 3.683340 GGTTGTTCGGTGGTCTAGAAATC 59.317 47.826 0.00 0.00 0.00 2.17
711 728 4.562963 GGTTGTTCGGTGGTCTAGAAATCT 60.563 45.833 0.00 0.00 0.00 2.40
712 729 4.884668 TGTTCGGTGGTCTAGAAATCTT 57.115 40.909 0.00 0.00 0.00 2.40
713 730 5.988310 TGTTCGGTGGTCTAGAAATCTTA 57.012 39.130 0.00 0.00 0.00 2.10
714 731 6.349243 TGTTCGGTGGTCTAGAAATCTTAA 57.651 37.500 0.00 0.00 0.00 1.85
715 732 6.942976 TGTTCGGTGGTCTAGAAATCTTAAT 58.057 36.000 0.00 0.00 0.00 1.40
716 733 6.816640 TGTTCGGTGGTCTAGAAATCTTAATG 59.183 38.462 0.00 0.00 0.00 1.90
717 734 6.540438 TCGGTGGTCTAGAAATCTTAATGT 57.460 37.500 0.00 0.00 0.00 2.71
718 735 7.649533 TCGGTGGTCTAGAAATCTTAATGTA 57.350 36.000 0.00 0.00 0.00 2.29
719 736 8.070034 TCGGTGGTCTAGAAATCTTAATGTAA 57.930 34.615 0.00 0.00 0.00 2.41
720 737 8.701895 TCGGTGGTCTAGAAATCTTAATGTAAT 58.298 33.333 0.00 0.00 0.00 1.89
721 738 9.326413 CGGTGGTCTAGAAATCTTAATGTAATT 57.674 33.333 0.00 0.00 41.28 1.40
820 838 7.035612 CCTTATAGTTTGAAAAGACCATTGGC 58.964 38.462 1.54 0.00 0.00 4.52
838 856 6.417258 CATTGGCCCCAAATTAAGAAGAAAT 58.583 36.000 0.00 0.00 39.55 2.17
839 857 5.419239 TGGCCCCAAATTAAGAAGAAATG 57.581 39.130 0.00 0.00 0.00 2.32
840 858 4.843516 TGGCCCCAAATTAAGAAGAAATGT 59.156 37.500 0.00 0.00 0.00 2.71
841 859 5.178061 GGCCCCAAATTAAGAAGAAATGTG 58.822 41.667 0.00 0.00 0.00 3.21
843 861 5.178061 CCCCAAATTAAGAAGAAATGTGGC 58.822 41.667 0.27 0.00 39.49 5.01
844 862 5.279910 CCCCAAATTAAGAAGAAATGTGGCA 60.280 40.000 0.27 0.00 39.49 4.92
845 863 5.639082 CCCAAATTAAGAAGAAATGTGGCAC 59.361 40.000 11.55 11.55 39.49 5.01
846 864 6.458210 CCAAATTAAGAAGAAATGTGGCACT 58.542 36.000 19.83 0.00 35.46 4.40
847 865 7.309744 CCCAAATTAAGAAGAAATGTGGCACTA 60.310 37.037 19.83 5.69 39.49 2.74
848 866 7.756722 CCAAATTAAGAAGAAATGTGGCACTAG 59.243 37.037 19.83 0.00 35.46 2.57
849 867 8.514594 CAAATTAAGAAGAAATGTGGCACTAGA 58.485 33.333 19.83 0.00 0.00 2.43
850 868 8.635765 AATTAAGAAGAAATGTGGCACTAGAA 57.364 30.769 19.83 0.00 0.00 2.10
851 869 8.814038 ATTAAGAAGAAATGTGGCACTAGAAT 57.186 30.769 19.83 0.17 0.00 2.40
866 884 5.340667 GCACTAGAATGCAAAGAAAAGTTCG 59.659 40.000 0.00 0.00 45.39 3.95
940 968 0.250901 ATCCACACACAAGCTCACCC 60.251 55.000 0.00 0.00 0.00 4.61
1099 1177 1.997874 GGGCTGGTCTCCATGGTCT 60.998 63.158 12.58 0.00 30.82 3.85
1504 1614 6.150140 AGCTGATATCAAAACTGAAACCTGTC 59.850 38.462 6.90 0.00 0.00 3.51
1507 1631 6.430925 TGATATCAAAACTGAAACCTGTCTGG 59.569 38.462 1.98 0.00 42.93 3.86
1523 1666 5.513094 CCTGTCTGGTTGAGGAAAATCACTA 60.513 44.000 0.00 0.00 0.00 2.74
1593 1807 0.321564 CTGCGTCTGAATTGGGGTCA 60.322 55.000 0.00 0.00 0.00 4.02
1717 1935 7.215085 GGACTAATTAATCGTGGACCAATAGT 58.785 38.462 0.00 0.00 0.00 2.12
1727 1945 5.365605 TCGTGGACCAATAGTATTGGAGATT 59.634 40.000 37.51 21.57 42.06 2.40
1728 1946 5.466728 CGTGGACCAATAGTATTGGAGATTG 59.533 44.000 37.51 23.30 42.06 2.67
1732 1950 4.666512 CCAATAGTATTGGAGATTGGGGG 58.333 47.826 30.67 5.30 43.06 5.40
1733 1951 4.353788 CCAATAGTATTGGAGATTGGGGGA 59.646 45.833 30.67 0.00 43.06 4.81
1734 1952 5.162991 CCAATAGTATTGGAGATTGGGGGAA 60.163 44.000 30.67 0.00 43.06 3.97
1735 1953 6.469239 CCAATAGTATTGGAGATTGGGGGAAT 60.469 42.308 30.67 0.00 43.06 3.01
1736 1954 4.459852 AGTATTGGAGATTGGGGGAATG 57.540 45.455 0.00 0.00 0.00 2.67
1737 1955 4.054369 AGTATTGGAGATTGGGGGAATGA 58.946 43.478 0.00 0.00 0.00 2.57
1738 1956 3.607490 ATTGGAGATTGGGGGAATGAG 57.393 47.619 0.00 0.00 0.00 2.90
1739 1957 1.225373 TGGAGATTGGGGGAATGAGG 58.775 55.000 0.00 0.00 0.00 3.86
1740 1958 0.480252 GGAGATTGGGGGAATGAGGG 59.520 60.000 0.00 0.00 0.00 4.30
1741 1959 0.480252 GAGATTGGGGGAATGAGGGG 59.520 60.000 0.00 0.00 0.00 4.79
1742 1960 1.152461 GATTGGGGGAATGAGGGGC 60.152 63.158 0.00 0.00 0.00 5.80
1784 2051 5.165961 ACAATCTGTGCTGGTTAGTGTAT 57.834 39.130 0.00 0.00 0.00 2.29
1837 2124 2.373707 GCTGATGAGGGGGTGCTCT 61.374 63.158 0.00 0.00 0.00 4.09
1973 2540 8.757982 AAATGATTTGACATATTCCTAGCACT 57.242 30.769 0.00 0.00 0.00 4.40
1976 2543 8.213518 TGATTTGACATATTCCTAGCACTTTC 57.786 34.615 0.00 0.00 0.00 2.62
2053 2655 1.165270 AACCGTGCCATAAGTTCAGC 58.835 50.000 0.00 0.00 0.00 4.26
2064 2666 6.549736 TGCCATAAGTTCAGCTATACAGACTA 59.450 38.462 0.00 0.00 0.00 2.59
2073 2683 8.616076 GTTCAGCTATACAGACTAAAATGCATT 58.384 33.333 5.99 5.99 0.00 3.56
2075 2685 9.481340 TCAGCTATACAGACTAAAATGCATTAG 57.519 33.333 13.39 10.02 38.56 1.73
2077 2687 7.389053 AGCTATACAGACTAAAATGCATTAGGC 59.611 37.037 13.39 9.77 40.58 3.93
2109 4211 6.633500 TCTTATGACTGTTGAAACCAAAGG 57.367 37.500 0.00 0.00 0.00 3.11
2121 4224 1.533753 CCAAAGGTGGGTGGCACAT 60.534 57.895 20.82 0.00 41.77 3.21
2136 4239 6.265196 GGGTGGCACATTAATGATGAGATTTA 59.735 38.462 22.16 0.00 44.52 1.40
2142 4245 8.223769 GCACATTAATGATGAGATTTACCTACG 58.776 37.037 22.16 0.00 39.15 3.51
2161 4264 6.661669 CCTACGTTTAGGTTTCGAACAAAAT 58.338 36.000 0.00 0.00 40.33 1.82
2172 4275 6.019881 GGTTTCGAACAAAATCTTTGGAGTTG 60.020 38.462 0.00 0.00 29.82 3.16
2278 4385 0.174845 TGGGCTTAATCGTGGACTCG 59.825 55.000 0.00 0.00 0.00 4.18
2284 4399 3.243301 GCTTAATCGTGGACTCGGATGTA 60.243 47.826 0.00 0.00 0.00 2.29
2285 4400 4.558898 GCTTAATCGTGGACTCGGATGTAT 60.559 45.833 0.00 0.00 0.00 2.29
2290 4405 2.035961 CGTGGACTCGGATGTATGGAAT 59.964 50.000 0.00 0.00 0.00 3.01
2301 4416 6.440647 TCGGATGTATGGAATCTAATAGGCTT 59.559 38.462 0.00 0.00 0.00 4.35
2320 4435 6.449698 AGGCTTAAGTTTCATGTCAATGTTG 58.550 36.000 4.02 0.00 35.15 3.33
2323 4438 7.865385 GGCTTAAGTTTCATGTCAATGTTGTAA 59.135 33.333 4.02 0.00 35.15 2.41
2357 4540 7.636359 GGATTTCAGAATTTCTTCGTTATGTCG 59.364 37.037 0.00 0.00 36.45 4.35
2514 4832 6.961554 GCTAGTGAAAGCAATTGTACATGTAC 59.038 38.462 25.99 25.99 42.30 2.90
2516 4834 7.133891 AGTGAAAGCAATTGTACATGTACTC 57.866 36.000 30.69 19.62 37.00 2.59
2517 4835 6.149474 AGTGAAAGCAATTGTACATGTACTCC 59.851 38.462 30.69 16.67 37.00 3.85
2520 4838 4.770795 AGCAATTGTACATGTACTCCCTC 58.229 43.478 30.69 18.85 37.00 4.30
2521 4839 3.877508 GCAATTGTACATGTACTCCCTCC 59.122 47.826 30.69 14.62 37.00 4.30
2522 4840 4.119862 CAATTGTACATGTACTCCCTCCG 58.880 47.826 30.69 13.03 37.00 4.63
2523 4841 2.519771 TGTACATGTACTCCCTCCGT 57.480 50.000 30.69 0.00 37.00 4.69
2525 4843 3.167485 TGTACATGTACTCCCTCCGTTT 58.833 45.455 30.69 0.00 37.00 3.60
2527 4845 1.553704 ACATGTACTCCCTCCGTTTCC 59.446 52.381 0.00 0.00 0.00 3.13
2528 4846 1.553248 CATGTACTCCCTCCGTTTCCA 59.447 52.381 0.00 0.00 0.00 3.53
2530 4848 1.264295 GTACTCCCTCCGTTTCCACT 58.736 55.000 0.00 0.00 0.00 4.00
2531 4849 1.622312 GTACTCCCTCCGTTTCCACTT 59.378 52.381 0.00 0.00 0.00 3.16
2548 4866 4.337555 TCCACTTTAGACTACATACGGAGC 59.662 45.833 0.00 0.00 0.00 4.70
2562 4880 2.571212 ACGGAGCAAAATGAGTGAACA 58.429 42.857 0.00 0.00 0.00 3.18
2668 5051 9.232473 GAGGGAGTACAAAATAAGAACTTCAAT 57.768 33.333 0.00 0.00 0.00 2.57
2670 5053 9.010029 GGGAGTACAAAATAAGAACTTCAATCA 57.990 33.333 0.00 0.00 0.00 2.57
2684 5072 6.867662 ACTTCAATCAAACTACAGTTCTGG 57.132 37.500 4.82 0.00 37.25 3.86
2710 5098 8.635765 ACTTGAGAAATTCCTTTAGCACATAA 57.364 30.769 0.00 0.00 0.00 1.90
2712 5100 8.635765 TTGAGAAATTCCTTTAGCACATAAGT 57.364 30.769 0.00 0.00 0.00 2.24
2713 5101 9.733556 TTGAGAAATTCCTTTAGCACATAAGTA 57.266 29.630 0.00 0.00 0.00 2.24
2895 5522 5.448496 CGTTGACATTGAAGAACTTGTGGAA 60.448 40.000 0.00 0.00 0.00 3.53
2923 5550 0.179000 CCGTATGGAAGAGGCTTGCT 59.821 55.000 0.00 0.00 37.49 3.91
2942 5569 0.036765 TCGGGATTCACAAGGTTCGG 60.037 55.000 0.00 0.00 0.00 4.30
3439 6092 6.183360 GCAAACCGTCTACGATTAAATCAAGA 60.183 38.462 3.65 0.00 43.02 3.02
3832 6552 5.825532 TCATCACAGATTCCCACCATTTTA 58.174 37.500 0.00 0.00 0.00 1.52
4128 7101 6.924111 TGTTGCCAGATTATTTTCCTTCTTC 58.076 36.000 0.00 0.00 0.00 2.87
4132 7105 5.126061 GCCAGATTATTTTCCTTCTTCTGCA 59.874 40.000 0.00 0.00 0.00 4.41
4151 7124 2.344950 CACTGCAGTTCTCTCATGTCC 58.655 52.381 18.94 0.00 0.00 4.02
5438 9344 4.436998 GTACGCGGTGCCTGCTCT 62.437 66.667 12.47 0.00 0.00 4.09
5519 9431 3.720601 AGCAGCGGCAAGGATCCA 61.721 61.111 15.82 0.00 44.61 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.161024 CTCGCTGTCGTTCGTTTTCC 59.839 55.000 0.00 0.00 36.96 3.13
2 3 0.449022 GCTCGCTGTCGTTCGTTTTC 60.449 55.000 0.00 0.00 36.96 2.29
3 4 1.149361 TGCTCGCTGTCGTTCGTTTT 61.149 50.000 0.00 0.00 36.96 2.43
8 9 3.453465 GACTGCTCGCTGTCGTTC 58.547 61.111 12.11 0.00 35.74 3.95
17 18 3.047718 TTCCCTACGCGACTGCTCG 62.048 63.158 15.93 0.00 43.28 5.03
33 34 0.037046 TTAGGTTTCGGGGAGCGTTC 60.037 55.000 0.00 0.00 0.00 3.95
34 35 0.616891 ATTAGGTTTCGGGGAGCGTT 59.383 50.000 0.00 0.00 0.00 4.84
43 44 2.158943 GGGAGAGGGTGATTAGGTTTCG 60.159 54.545 0.00 0.00 0.00 3.46
44 45 2.844348 TGGGAGAGGGTGATTAGGTTTC 59.156 50.000 0.00 0.00 0.00 2.78
55 56 1.132689 GGATCCTGTATGGGAGAGGGT 60.133 57.143 3.84 0.00 39.21 4.34
58 59 2.294449 TCGGATCCTGTATGGGAGAG 57.706 55.000 10.75 0.00 38.92 3.20
64 66 1.336332 CGCCTCTTCGGATCCTGTATG 60.336 57.143 10.75 0.00 33.16 2.39
75 77 4.194720 CGAGACCCCGCCTCTTCG 62.195 72.222 0.00 0.00 0.00 3.79
77 79 4.377760 TCCGAGACCCCGCCTCTT 62.378 66.667 0.00 0.00 0.00 2.85
89 91 3.535962 GGAGAGCAGGCCTCCGAG 61.536 72.222 0.00 0.00 41.74 4.63
93 95 1.078567 CAACAGGAGAGCAGGCCTC 60.079 63.158 0.00 0.00 41.07 4.70
99 101 2.343758 GCGGTCAACAGGAGAGCA 59.656 61.111 0.00 0.00 33.29 4.26
122 124 3.208884 GATCCCATCCCGTCCGTCG 62.209 68.421 0.00 0.00 39.52 5.12
124 126 2.042333 TGATCCCATCCCGTCCGT 60.042 61.111 0.00 0.00 0.00 4.69
125 127 2.421739 GTGATCCCATCCCGTCCG 59.578 66.667 0.00 0.00 0.00 4.79
134 136 3.716195 CTGCCACCGGTGATCCCA 61.716 66.667 36.07 22.85 0.00 4.37
144 146 2.138656 CTTCTGCTGTTGCTGCCACC 62.139 60.000 1.07 0.00 40.48 4.61
145 147 1.285023 CTTCTGCTGTTGCTGCCAC 59.715 57.895 0.00 0.00 40.48 5.01
146 148 1.900016 CCTTCTGCTGTTGCTGCCA 60.900 57.895 0.00 0.00 40.48 4.92
152 154 1.528586 CTGTCGTTCCTTCTGCTGTTG 59.471 52.381 0.00 0.00 0.00 3.33
160 162 2.853914 GCGCACTGTCGTTCCTTC 59.146 61.111 0.30 0.00 0.00 3.46
172 174 3.737172 ATTTGCCTCCACGCGCAC 61.737 61.111 5.73 0.00 33.97 5.34
175 177 1.647545 ATCACATTTGCCTCCACGCG 61.648 55.000 3.53 3.53 0.00 6.01
176 178 0.099436 GATCACATTTGCCTCCACGC 59.901 55.000 0.00 0.00 0.00 5.34
179 181 2.885135 ACAGATCACATTTGCCTCCA 57.115 45.000 0.00 0.00 0.00 3.86
180 182 3.367703 CCAAACAGATCACATTTGCCTCC 60.368 47.826 9.62 0.00 32.98 4.30
181 183 3.841643 CCAAACAGATCACATTTGCCTC 58.158 45.455 9.62 0.00 32.98 4.70
182 184 2.028748 GCCAAACAGATCACATTTGCCT 60.029 45.455 9.62 0.00 32.98 4.75
183 185 2.340337 GCCAAACAGATCACATTTGCC 58.660 47.619 9.62 0.00 32.98 4.52
187 198 2.226437 GTCACGCCAAACAGATCACATT 59.774 45.455 0.00 0.00 0.00 2.71
191 202 0.948623 CCGTCACGCCAAACAGATCA 60.949 55.000 0.00 0.00 0.00 2.92
195 206 1.626654 CTAGCCGTCACGCCAAACAG 61.627 60.000 0.00 0.00 0.00 3.16
201 212 4.078516 AACCCTAGCCGTCACGCC 62.079 66.667 0.00 0.00 0.00 5.68
202 213 2.813908 CAACCCTAGCCGTCACGC 60.814 66.667 0.00 0.00 0.00 5.34
207 218 2.606519 TCTGCCAACCCTAGCCGT 60.607 61.111 0.00 0.00 0.00 5.68
245 256 3.425578 CACATCTCTCCACGTGGAC 57.574 57.895 33.23 0.00 39.78 4.02
248 259 0.321671 AACCCACATCTCTCCACGTG 59.678 55.000 9.08 9.08 0.00 4.49
249 260 0.321671 CAACCCACATCTCTCCACGT 59.678 55.000 0.00 0.00 0.00 4.49
250 261 0.608130 TCAACCCACATCTCTCCACG 59.392 55.000 0.00 0.00 0.00 4.94
266 277 3.810386 TCATTGAATCGAACGTGGTTCAA 59.190 39.130 14.49 14.49 42.05 2.69
269 280 3.135225 TGTCATTGAATCGAACGTGGTT 58.865 40.909 0.00 0.00 0.00 3.67
273 284 2.993899 GGACTGTCATTGAATCGAACGT 59.006 45.455 10.38 0.00 0.00 3.99
274 285 2.993220 TGGACTGTCATTGAATCGAACG 59.007 45.455 10.38 0.00 0.00 3.95
275 286 4.631377 TCATGGACTGTCATTGAATCGAAC 59.369 41.667 10.38 0.00 0.00 3.95
277 289 4.470334 TCATGGACTGTCATTGAATCGA 57.530 40.909 10.38 0.00 0.00 3.59
281 293 3.197549 TCGGATCATGGACTGTCATTGAA 59.802 43.478 10.38 0.00 0.00 2.69
286 298 0.455815 CGTCGGATCATGGACTGTCA 59.544 55.000 10.38 0.00 0.00 3.58
287 299 0.456221 ACGTCGGATCATGGACTGTC 59.544 55.000 0.00 0.00 0.00 3.51
289 301 0.741326 AGACGTCGGATCATGGACTG 59.259 55.000 10.46 0.00 0.00 3.51
292 304 2.927028 TCTAAGACGTCGGATCATGGA 58.073 47.619 10.46 0.00 0.00 3.41
294 306 3.058846 ACGATCTAAGACGTCGGATCATG 60.059 47.826 29.44 22.27 38.34 3.07
296 308 2.287103 CACGATCTAAGACGTCGGATCA 59.713 50.000 29.44 12.35 40.76 2.92
301 313 0.591741 GGCCACGATCTAAGACGTCG 60.592 60.000 10.46 0.00 40.76 5.12
309 321 0.535335 GTCAACTGGGCCACGATCTA 59.465 55.000 0.00 0.00 0.00 1.98
315 327 1.480545 AGTTTTTGTCAACTGGGCCAC 59.519 47.619 0.00 0.00 35.57 5.01
316 328 1.754226 GAGTTTTTGTCAACTGGGCCA 59.246 47.619 5.85 5.85 37.11 5.36
317 329 1.068588 GGAGTTTTTGTCAACTGGGCC 59.931 52.381 0.00 0.00 37.11 5.80
320 332 4.981806 TTGAGGAGTTTTTGTCAACTGG 57.018 40.909 0.00 0.00 37.11 4.00
322 334 5.300286 CAGGATTGAGGAGTTTTTGTCAACT 59.700 40.000 0.00 0.00 39.84 3.16
323 335 5.299279 TCAGGATTGAGGAGTTTTTGTCAAC 59.701 40.000 0.00 0.00 31.94 3.18
324 336 5.299279 GTCAGGATTGAGGAGTTTTTGTCAA 59.701 40.000 0.00 0.00 32.98 3.18
327 339 4.145052 GGTCAGGATTGAGGAGTTTTTGT 58.855 43.478 0.00 0.00 32.98 2.83
328 340 3.189287 CGGTCAGGATTGAGGAGTTTTTG 59.811 47.826 0.00 0.00 32.98 2.44
331 343 1.279271 CCGGTCAGGATTGAGGAGTTT 59.721 52.381 0.00 0.00 45.00 2.66
332 344 0.905357 CCGGTCAGGATTGAGGAGTT 59.095 55.000 0.00 0.00 45.00 3.01
335 347 1.198094 TTGCCGGTCAGGATTGAGGA 61.198 55.000 1.90 0.00 45.00 3.71
337 349 1.533625 TTTTGCCGGTCAGGATTGAG 58.466 50.000 1.90 0.00 45.00 3.02
338 350 1.988293 TTTTTGCCGGTCAGGATTGA 58.012 45.000 1.90 0.00 45.00 2.57
340 352 3.119137 GCTTATTTTTGCCGGTCAGGATT 60.119 43.478 1.90 0.00 45.00 3.01
341 353 2.427095 GCTTATTTTTGCCGGTCAGGAT 59.573 45.455 1.90 0.00 45.00 3.24
350 362 4.442073 CACATCTATGCGCTTATTTTTGCC 59.558 41.667 9.73 0.00 0.00 4.52
353 365 5.297776 AGCTCACATCTATGCGCTTATTTTT 59.702 36.000 9.73 0.00 0.00 1.94
358 370 3.459232 AAGCTCACATCTATGCGCTTA 57.541 42.857 9.73 5.78 37.34 3.09
363 375 4.327982 TGAGGTAAGCTCACATCTATGC 57.672 45.455 2.89 0.00 30.69 3.14
369 381 2.158900 CGGGAATGAGGTAAGCTCACAT 60.159 50.000 0.00 0.00 33.29 3.21
378 390 0.104120 CACATCGCGGGAATGAGGTA 59.896 55.000 12.64 0.00 0.00 3.08
380 392 1.153369 ACACATCGCGGGAATGAGG 60.153 57.895 19.73 7.08 0.00 3.86
392 409 1.915614 CTGCCTTGCCACGACACATC 61.916 60.000 0.00 0.00 0.00 3.06
394 411 2.591429 CTGCCTTGCCACGACACA 60.591 61.111 0.00 0.00 0.00 3.72
395 412 3.357079 CCTGCCTTGCCACGACAC 61.357 66.667 0.00 0.00 0.00 3.67
405 422 4.329545 TTCTTCGCCGCCTGCCTT 62.330 61.111 0.00 0.00 36.24 4.35
406 423 4.767255 CTTCTTCGCCGCCTGCCT 62.767 66.667 0.00 0.00 36.24 4.75
408 425 4.760047 TCCTTCTTCGCCGCCTGC 62.760 66.667 0.00 0.00 0.00 4.85
409 426 2.510238 CTCCTTCTTCGCCGCCTG 60.510 66.667 0.00 0.00 0.00 4.85
410 427 4.459089 GCTCCTTCTTCGCCGCCT 62.459 66.667 0.00 0.00 0.00 5.52
416 433 3.642778 TTCCCGCGCTCCTTCTTCG 62.643 63.158 5.56 0.00 0.00 3.79
417 434 2.101233 GTTCCCGCGCTCCTTCTTC 61.101 63.158 5.56 0.00 0.00 2.87
418 435 2.047179 GTTCCCGCGCTCCTTCTT 60.047 61.111 5.56 0.00 0.00 2.52
419 436 2.185310 AATGTTCCCGCGCTCCTTCT 62.185 55.000 5.56 0.00 0.00 2.85
420 437 1.305930 AAATGTTCCCGCGCTCCTTC 61.306 55.000 5.56 0.00 0.00 3.46
421 438 1.303317 AAATGTTCCCGCGCTCCTT 60.303 52.632 5.56 0.00 0.00 3.36
422 439 1.745489 GAAATGTTCCCGCGCTCCT 60.745 57.895 5.56 0.00 0.00 3.69
423 440 1.706287 GAGAAATGTTCCCGCGCTCC 61.706 60.000 5.56 0.00 0.00 4.70
424 441 0.741221 AGAGAAATGTTCCCGCGCTC 60.741 55.000 5.56 0.00 0.00 5.03
425 442 0.321653 AAGAGAAATGTTCCCGCGCT 60.322 50.000 5.56 0.00 0.00 5.92
426 443 0.097150 GAAGAGAAATGTTCCCGCGC 59.903 55.000 0.00 0.00 0.00 6.86
427 444 1.661112 GAGAAGAGAAATGTTCCCGCG 59.339 52.381 0.00 0.00 0.00 6.46
428 445 2.699954 TGAGAAGAGAAATGTTCCCGC 58.300 47.619 0.00 0.00 0.00 6.13
429 446 3.126000 GCTTGAGAAGAGAAATGTTCCCG 59.874 47.826 0.00 0.00 0.00 5.14
430 447 4.331108 AGCTTGAGAAGAGAAATGTTCCC 58.669 43.478 0.00 0.00 0.00 3.97
431 448 4.394610 GGAGCTTGAGAAGAGAAATGTTCC 59.605 45.833 0.00 0.00 0.00 3.62
432 449 4.999950 TGGAGCTTGAGAAGAGAAATGTTC 59.000 41.667 0.00 0.00 0.00 3.18
433 450 4.978099 TGGAGCTTGAGAAGAGAAATGTT 58.022 39.130 0.00 0.00 0.00 2.71
434 451 4.630644 TGGAGCTTGAGAAGAGAAATGT 57.369 40.909 0.00 0.00 0.00 2.71
435 452 7.249186 CTATTGGAGCTTGAGAAGAGAAATG 57.751 40.000 0.00 0.00 0.00 2.32
451 468 2.945008 TCTTTTCCGCATGCTATTGGAG 59.055 45.455 17.13 6.80 0.00 3.86
452 469 2.997980 TCTTTTCCGCATGCTATTGGA 58.002 42.857 17.13 12.08 0.00 3.53
453 470 3.781079 TTCTTTTCCGCATGCTATTGG 57.219 42.857 17.13 9.66 0.00 3.16
454 471 4.293415 GGATTCTTTTCCGCATGCTATTG 58.707 43.478 17.13 0.00 0.00 1.90
455 472 3.319122 GGGATTCTTTTCCGCATGCTATT 59.681 43.478 17.13 0.00 36.58 1.73
456 473 2.887152 GGGATTCTTTTCCGCATGCTAT 59.113 45.455 17.13 0.00 36.58 2.97
457 474 2.092429 AGGGATTCTTTTCCGCATGCTA 60.092 45.455 17.13 0.06 36.58 3.49
458 475 1.106285 GGGATTCTTTTCCGCATGCT 58.894 50.000 17.13 0.00 36.58 3.79
459 476 1.106285 AGGGATTCTTTTCCGCATGC 58.894 50.000 7.91 7.91 36.58 4.06
460 477 6.438763 GTTATAAGGGATTCTTTTCCGCATG 58.561 40.000 0.00 0.00 36.58 4.06
461 478 5.238650 CGTTATAAGGGATTCTTTTCCGCAT 59.761 40.000 0.00 0.00 36.58 4.73
462 479 4.573201 CGTTATAAGGGATTCTTTTCCGCA 59.427 41.667 0.00 0.00 36.58 5.69
463 480 4.812626 TCGTTATAAGGGATTCTTTTCCGC 59.187 41.667 5.39 0.00 36.58 5.54
464 481 5.465724 CCTCGTTATAAGGGATTCTTTTCCG 59.534 44.000 5.39 0.00 36.58 4.30
465 482 6.354938 ACCTCGTTATAAGGGATTCTTTTCC 58.645 40.000 5.39 0.00 38.29 3.13
466 483 6.482641 GGACCTCGTTATAAGGGATTCTTTTC 59.517 42.308 5.39 0.00 38.29 2.29
467 484 6.069847 TGGACCTCGTTATAAGGGATTCTTTT 60.070 38.462 5.39 0.00 38.29 2.27
468 485 5.427481 TGGACCTCGTTATAAGGGATTCTTT 59.573 40.000 5.39 0.00 38.29 2.52
469 486 4.966805 TGGACCTCGTTATAAGGGATTCTT 59.033 41.667 5.39 0.00 38.29 2.52
470 487 4.553678 TGGACCTCGTTATAAGGGATTCT 58.446 43.478 5.39 0.00 38.29 2.40
471 488 4.950205 TGGACCTCGTTATAAGGGATTC 57.050 45.455 5.39 0.29 38.29 2.52
472 489 4.720273 AGTTGGACCTCGTTATAAGGGATT 59.280 41.667 5.39 0.00 38.29 3.01
473 490 4.296056 AGTTGGACCTCGTTATAAGGGAT 58.704 43.478 5.39 0.00 38.29 3.85
474 491 3.703052 GAGTTGGACCTCGTTATAAGGGA 59.297 47.826 5.39 0.00 38.29 4.20
475 492 3.181468 GGAGTTGGACCTCGTTATAAGGG 60.181 52.174 5.39 2.12 38.29 3.95
476 493 3.705072 AGGAGTTGGACCTCGTTATAAGG 59.295 47.826 0.00 0.00 39.96 2.69
477 494 4.934515 GAGGAGTTGGACCTCGTTATAAG 58.065 47.826 0.00 0.00 43.25 1.73
478 495 4.996788 GAGGAGTTGGACCTCGTTATAA 57.003 45.455 0.00 0.00 43.25 0.98
486 503 3.261818 AGTTGTAGAGGAGTTGGACCT 57.738 47.619 0.00 0.00 40.80 3.85
487 504 3.119065 GCTAGTTGTAGAGGAGTTGGACC 60.119 52.174 0.00 0.00 0.00 4.46
488 505 3.427773 CGCTAGTTGTAGAGGAGTTGGAC 60.428 52.174 0.00 0.00 0.00 4.02
489 506 2.753452 CGCTAGTTGTAGAGGAGTTGGA 59.247 50.000 0.00 0.00 0.00 3.53
490 507 2.159226 CCGCTAGTTGTAGAGGAGTTGG 60.159 54.545 0.00 0.00 46.54 3.77
491 508 2.735762 GCCGCTAGTTGTAGAGGAGTTG 60.736 54.545 6.40 0.00 46.54 3.16
492 509 1.477295 GCCGCTAGTTGTAGAGGAGTT 59.523 52.381 6.40 0.00 46.54 3.01
493 510 1.104630 GCCGCTAGTTGTAGAGGAGT 58.895 55.000 6.40 0.00 46.54 3.85
494 511 1.103803 TGCCGCTAGTTGTAGAGGAG 58.896 55.000 6.40 0.00 46.54 3.69
495 512 1.409064 CATGCCGCTAGTTGTAGAGGA 59.591 52.381 6.40 0.00 46.54 3.71
496 513 1.409064 TCATGCCGCTAGTTGTAGAGG 59.591 52.381 0.00 0.00 46.39 3.69
497 514 2.359214 TCTCATGCCGCTAGTTGTAGAG 59.641 50.000 0.00 0.00 0.00 2.43
498 515 2.375146 TCTCATGCCGCTAGTTGTAGA 58.625 47.619 0.00 0.00 0.00 2.59
499 516 2.871182 TCTCATGCCGCTAGTTGTAG 57.129 50.000 0.00 0.00 0.00 2.74
500 517 3.819564 AATCTCATGCCGCTAGTTGTA 57.180 42.857 0.00 0.00 0.00 2.41
501 518 2.698855 AATCTCATGCCGCTAGTTGT 57.301 45.000 0.00 0.00 0.00 3.32
502 519 4.572389 AGTTTAATCTCATGCCGCTAGTTG 59.428 41.667 0.00 0.00 0.00 3.16
503 520 4.770795 AGTTTAATCTCATGCCGCTAGTT 58.229 39.130 0.00 0.00 0.00 2.24
504 521 4.408182 AGTTTAATCTCATGCCGCTAGT 57.592 40.909 0.00 0.00 0.00 2.57
505 522 4.811024 TGAAGTTTAATCTCATGCCGCTAG 59.189 41.667 0.00 0.00 0.00 3.42
506 523 4.570772 GTGAAGTTTAATCTCATGCCGCTA 59.429 41.667 0.00 0.00 0.00 4.26
507 524 3.375299 GTGAAGTTTAATCTCATGCCGCT 59.625 43.478 0.00 0.00 0.00 5.52
508 525 3.126858 TGTGAAGTTTAATCTCATGCCGC 59.873 43.478 0.00 0.00 0.00 6.53
509 526 4.437390 GGTGTGAAGTTTAATCTCATGCCG 60.437 45.833 0.00 0.00 0.00 5.69
510 527 4.458989 TGGTGTGAAGTTTAATCTCATGCC 59.541 41.667 0.00 0.00 0.00 4.40
511 528 5.048782 TGTGGTGTGAAGTTTAATCTCATGC 60.049 40.000 0.00 0.00 0.00 4.06
512 529 6.373779 GTGTGGTGTGAAGTTTAATCTCATG 58.626 40.000 0.00 0.00 0.00 3.07
513 530 5.473504 GGTGTGGTGTGAAGTTTAATCTCAT 59.526 40.000 0.00 0.00 0.00 2.90
514 531 4.819630 GGTGTGGTGTGAAGTTTAATCTCA 59.180 41.667 0.00 0.00 0.00 3.27
515 532 5.063880 AGGTGTGGTGTGAAGTTTAATCTC 58.936 41.667 0.00 0.00 0.00 2.75
516 533 5.048846 AGGTGTGGTGTGAAGTTTAATCT 57.951 39.130 0.00 0.00 0.00 2.40
517 534 5.767816 AAGGTGTGGTGTGAAGTTTAATC 57.232 39.130 0.00 0.00 0.00 1.75
518 535 6.538945 AAAAGGTGTGGTGTGAAGTTTAAT 57.461 33.333 0.00 0.00 0.00 1.40
519 536 5.986501 AAAAGGTGTGGTGTGAAGTTTAA 57.013 34.783 0.00 0.00 0.00 1.52
520 537 5.986501 AAAAAGGTGTGGTGTGAAGTTTA 57.013 34.783 0.00 0.00 0.00 2.01
521 538 4.882842 AAAAAGGTGTGGTGTGAAGTTT 57.117 36.364 0.00 0.00 0.00 2.66
547 564 5.186198 GCATTAGGTGTGGTGAGAAGTATT 58.814 41.667 0.00 0.00 0.00 1.89
548 565 4.384208 GGCATTAGGTGTGGTGAGAAGTAT 60.384 45.833 0.00 0.00 0.00 2.12
549 566 3.055385 GGCATTAGGTGTGGTGAGAAGTA 60.055 47.826 0.00 0.00 0.00 2.24
550 567 2.290323 GGCATTAGGTGTGGTGAGAAGT 60.290 50.000 0.00 0.00 0.00 3.01
551 568 2.290260 TGGCATTAGGTGTGGTGAGAAG 60.290 50.000 0.00 0.00 0.00 2.85
552 569 1.702401 TGGCATTAGGTGTGGTGAGAA 59.298 47.619 0.00 0.00 0.00 2.87
553 570 1.357137 TGGCATTAGGTGTGGTGAGA 58.643 50.000 0.00 0.00 0.00 3.27
554 571 2.425143 ATGGCATTAGGTGTGGTGAG 57.575 50.000 0.00 0.00 0.00 3.51
555 572 5.373222 GTTATATGGCATTAGGTGTGGTGA 58.627 41.667 4.78 0.00 0.00 4.02
556 573 4.518970 GGTTATATGGCATTAGGTGTGGTG 59.481 45.833 4.78 0.00 0.00 4.17
557 574 4.447180 GGGTTATATGGCATTAGGTGTGGT 60.447 45.833 4.78 0.00 0.00 4.16
558 575 4.079253 GGGTTATATGGCATTAGGTGTGG 58.921 47.826 4.78 0.00 0.00 4.17
559 576 4.518970 GTGGGTTATATGGCATTAGGTGTG 59.481 45.833 4.78 0.00 0.00 3.82
560 577 4.167113 TGTGGGTTATATGGCATTAGGTGT 59.833 41.667 4.78 0.00 0.00 4.16
561 578 4.518970 GTGTGGGTTATATGGCATTAGGTG 59.481 45.833 4.78 0.00 0.00 4.00
562 579 4.167113 TGTGTGGGTTATATGGCATTAGGT 59.833 41.667 4.78 0.00 0.00 3.08
563 580 4.724399 TGTGTGGGTTATATGGCATTAGG 58.276 43.478 4.78 0.00 0.00 2.69
564 581 4.761739 CCTGTGTGGGTTATATGGCATTAG 59.238 45.833 4.78 0.00 0.00 1.73
565 582 4.724399 CCTGTGTGGGTTATATGGCATTA 58.276 43.478 4.78 0.00 0.00 1.90
566 583 3.565307 CCTGTGTGGGTTATATGGCATT 58.435 45.455 4.78 0.00 0.00 3.56
567 584 2.752829 GCCTGTGTGGGTTATATGGCAT 60.753 50.000 4.88 4.88 38.99 4.40
568 585 1.409521 GCCTGTGTGGGTTATATGGCA 60.410 52.381 0.00 0.00 38.99 4.92
569 586 1.318576 GCCTGTGTGGGTTATATGGC 58.681 55.000 0.00 0.00 36.00 4.40
570 587 1.494721 AGGCCTGTGTGGGTTATATGG 59.505 52.381 3.11 0.00 36.00 2.74
571 588 3.297134 AAGGCCTGTGTGGGTTATATG 57.703 47.619 5.69 0.00 36.00 1.78
572 589 4.724798 TCTAAAGGCCTGTGTGGGTTATAT 59.275 41.667 5.69 0.00 36.00 0.86
573 590 4.105577 TCTAAAGGCCTGTGTGGGTTATA 58.894 43.478 5.69 0.00 36.00 0.98
574 591 2.916934 TCTAAAGGCCTGTGTGGGTTAT 59.083 45.455 5.69 0.00 36.00 1.89
575 592 2.304761 CTCTAAAGGCCTGTGTGGGTTA 59.695 50.000 5.69 0.00 36.00 2.85
576 593 1.073923 CTCTAAAGGCCTGTGTGGGTT 59.926 52.381 5.69 0.00 36.00 4.11
577 594 0.693049 CTCTAAAGGCCTGTGTGGGT 59.307 55.000 5.69 0.00 36.00 4.51
578 595 0.984230 TCTCTAAAGGCCTGTGTGGG 59.016 55.000 5.69 0.00 36.00 4.61
579 596 3.356529 AATCTCTAAAGGCCTGTGTGG 57.643 47.619 5.69 0.00 39.35 4.17
580 597 5.006386 AGAAAATCTCTAAAGGCCTGTGTG 58.994 41.667 5.69 0.00 30.22 3.82
581 598 5.006386 CAGAAAATCTCTAAAGGCCTGTGT 58.994 41.667 5.69 0.00 31.12 3.72
582 599 5.248640 TCAGAAAATCTCTAAAGGCCTGTG 58.751 41.667 5.69 0.00 31.12 3.66
583 600 5.505181 TCAGAAAATCTCTAAAGGCCTGT 57.495 39.130 5.69 1.77 31.12 4.00
584 601 6.824305 TTTCAGAAAATCTCTAAAGGCCTG 57.176 37.500 5.69 0.00 31.12 4.85
585 602 7.452813 ACAATTTCAGAAAATCTCTAAAGGCCT 59.547 33.333 0.00 0.00 33.93 5.19
586 603 7.606349 ACAATTTCAGAAAATCTCTAAAGGCC 58.394 34.615 0.00 0.00 33.93 5.19
592 609 8.950210 CCAGCTAACAATTTCAGAAAATCTCTA 58.050 33.333 0.00 0.00 33.93 2.43
593 610 7.094032 CCCAGCTAACAATTTCAGAAAATCTCT 60.094 37.037 0.00 0.00 33.93 3.10
594 611 7.031975 CCCAGCTAACAATTTCAGAAAATCTC 58.968 38.462 0.00 0.00 33.93 2.75
595 612 6.573094 GCCCAGCTAACAATTTCAGAAAATCT 60.573 38.462 0.00 0.00 33.93 2.40
596 613 5.578336 GCCCAGCTAACAATTTCAGAAAATC 59.422 40.000 0.00 0.00 33.93 2.17
597 614 5.246883 AGCCCAGCTAACAATTTCAGAAAAT 59.753 36.000 0.00 0.00 36.99 1.82
598 615 4.588528 AGCCCAGCTAACAATTTCAGAAAA 59.411 37.500 0.00 0.00 36.99 2.29
599 616 4.151883 AGCCCAGCTAACAATTTCAGAAA 58.848 39.130 0.00 0.00 36.99 2.52
600 617 3.766545 AGCCCAGCTAACAATTTCAGAA 58.233 40.909 0.00 0.00 36.99 3.02
601 618 3.439857 AGCCCAGCTAACAATTTCAGA 57.560 42.857 0.00 0.00 36.99 3.27
602 619 4.525912 AAAGCCCAGCTAACAATTTCAG 57.474 40.909 0.00 0.00 38.25 3.02
603 620 4.462483 CCTAAAGCCCAGCTAACAATTTCA 59.538 41.667 0.00 0.00 38.25 2.69
604 621 4.678044 GCCTAAAGCCCAGCTAACAATTTC 60.678 45.833 0.00 0.00 38.25 2.17
605 622 3.195610 GCCTAAAGCCCAGCTAACAATTT 59.804 43.478 0.00 0.00 38.25 1.82
606 623 2.760650 GCCTAAAGCCCAGCTAACAATT 59.239 45.455 0.00 0.00 38.25 2.32
607 624 2.379005 GCCTAAAGCCCAGCTAACAAT 58.621 47.619 0.00 0.00 38.25 2.71
608 625 1.834188 GCCTAAAGCCCAGCTAACAA 58.166 50.000 0.00 0.00 38.25 2.83
609 626 3.569873 GCCTAAAGCCCAGCTAACA 57.430 52.632 0.00 0.00 38.25 2.41
619 636 3.808834 ATATTAGGGTGGGCCTAAAGC 57.191 47.619 4.53 0.00 42.60 3.51
620 637 5.701224 TGAAATATTAGGGTGGGCCTAAAG 58.299 41.667 4.53 0.00 34.12 1.85
621 638 5.735733 TGAAATATTAGGGTGGGCCTAAA 57.264 39.130 4.53 0.00 34.12 1.85
622 639 5.044030 TGTTGAAATATTAGGGTGGGCCTAA 60.044 40.000 4.53 0.00 34.79 2.69
623 640 4.479056 TGTTGAAATATTAGGGTGGGCCTA 59.521 41.667 4.53 0.00 34.45 3.93
624 641 3.270960 TGTTGAAATATTAGGGTGGGCCT 59.729 43.478 4.53 0.00 34.45 5.19
625 642 3.637769 TGTTGAAATATTAGGGTGGGCC 58.362 45.455 0.00 0.00 0.00 5.80
626 643 4.099419 CCTTGTTGAAATATTAGGGTGGGC 59.901 45.833 0.00 0.00 0.00 5.36
627 644 5.515106 TCCTTGTTGAAATATTAGGGTGGG 58.485 41.667 0.85 0.00 0.00 4.61
628 645 8.630037 GTTATCCTTGTTGAAATATTAGGGTGG 58.370 37.037 0.85 0.00 0.00 4.61
629 646 8.342634 CGTTATCCTTGTTGAAATATTAGGGTG 58.657 37.037 0.85 0.00 0.00 4.61
630 647 8.269317 TCGTTATCCTTGTTGAAATATTAGGGT 58.731 33.333 0.85 0.00 0.00 4.34
631 648 8.671384 TCGTTATCCTTGTTGAAATATTAGGG 57.329 34.615 0.85 0.00 0.00 3.53
633 650 9.599322 GCATCGTTATCCTTGTTGAAATATTAG 57.401 33.333 0.00 0.00 0.00 1.73
634 651 9.114952 TGCATCGTTATCCTTGTTGAAATATTA 57.885 29.630 0.00 0.00 0.00 0.98
635 652 7.995289 TGCATCGTTATCCTTGTTGAAATATT 58.005 30.769 0.00 0.00 0.00 1.28
636 653 7.566760 TGCATCGTTATCCTTGTTGAAATAT 57.433 32.000 0.00 0.00 0.00 1.28
637 654 6.993786 TGCATCGTTATCCTTGTTGAAATA 57.006 33.333 0.00 0.00 0.00 1.40
638 655 5.895636 TGCATCGTTATCCTTGTTGAAAT 57.104 34.783 0.00 0.00 0.00 2.17
639 656 5.895636 ATGCATCGTTATCCTTGTTGAAA 57.104 34.783 0.00 0.00 0.00 2.69
640 657 5.392919 CCAATGCATCGTTATCCTTGTTGAA 60.393 40.000 0.00 0.00 0.00 2.69
641 658 4.096231 CCAATGCATCGTTATCCTTGTTGA 59.904 41.667 0.00 0.00 0.00 3.18
642 659 4.353737 CCAATGCATCGTTATCCTTGTTG 58.646 43.478 0.00 0.00 0.00 3.33
643 660 3.181487 GCCAATGCATCGTTATCCTTGTT 60.181 43.478 0.00 0.00 37.47 2.83
644 661 2.358898 GCCAATGCATCGTTATCCTTGT 59.641 45.455 0.00 0.00 37.47 3.16
645 662 2.602933 CGCCAATGCATCGTTATCCTTG 60.603 50.000 0.00 0.00 37.32 3.61
646 663 1.603802 CGCCAATGCATCGTTATCCTT 59.396 47.619 0.00 0.00 37.32 3.36
647 664 1.202639 TCGCCAATGCATCGTTATCCT 60.203 47.619 0.00 0.00 37.32 3.24
648 665 1.069906 GTCGCCAATGCATCGTTATCC 60.070 52.381 0.00 0.00 37.32 2.59
649 666 1.867233 AGTCGCCAATGCATCGTTATC 59.133 47.619 0.00 0.00 37.32 1.75
650 667 1.867233 GAGTCGCCAATGCATCGTTAT 59.133 47.619 0.00 0.00 37.32 1.89
651 668 1.286501 GAGTCGCCAATGCATCGTTA 58.713 50.000 0.00 0.00 37.32 3.18
652 669 0.673333 TGAGTCGCCAATGCATCGTT 60.673 50.000 0.00 0.00 37.32 3.85
653 670 0.462581 ATGAGTCGCCAATGCATCGT 60.463 50.000 0.00 0.00 37.32 3.73
654 671 0.659427 AATGAGTCGCCAATGCATCG 59.341 50.000 0.00 0.00 37.32 3.84
655 672 1.402968 ACAATGAGTCGCCAATGCATC 59.597 47.619 0.00 0.00 37.32 3.91
656 673 1.466856 ACAATGAGTCGCCAATGCAT 58.533 45.000 0.00 0.00 37.32 3.96
657 674 2.009051 CTACAATGAGTCGCCAATGCA 58.991 47.619 0.00 0.00 37.32 3.96
658 675 1.331756 CCTACAATGAGTCGCCAATGC 59.668 52.381 0.00 0.00 0.00 3.56
659 676 1.942657 CCCTACAATGAGTCGCCAATG 59.057 52.381 0.00 0.00 0.00 2.82
660 677 1.747206 GCCCTACAATGAGTCGCCAAT 60.747 52.381 0.00 0.00 0.00 3.16
661 678 0.392461 GCCCTACAATGAGTCGCCAA 60.392 55.000 0.00 0.00 0.00 4.52
662 679 1.220749 GCCCTACAATGAGTCGCCA 59.779 57.895 0.00 0.00 0.00 5.69
663 680 1.523938 GGCCCTACAATGAGTCGCC 60.524 63.158 0.00 0.00 32.14 5.54
664 681 0.811616 CTGGCCCTACAATGAGTCGC 60.812 60.000 0.00 0.00 0.00 5.19
665 682 0.537188 ACTGGCCCTACAATGAGTCG 59.463 55.000 0.00 0.00 0.00 4.18
666 683 2.766828 ACTACTGGCCCTACAATGAGTC 59.233 50.000 0.00 0.00 0.00 3.36
667 684 2.501723 CACTACTGGCCCTACAATGAGT 59.498 50.000 0.00 0.00 0.00 3.41
668 685 2.158900 CCACTACTGGCCCTACAATGAG 60.159 54.545 0.00 0.00 0.00 2.90
669 686 1.837439 CCACTACTGGCCCTACAATGA 59.163 52.381 0.00 0.00 0.00 2.57
670 687 1.559682 ACCACTACTGGCCCTACAATG 59.440 52.381 0.00 0.00 42.08 2.82
671 688 1.966845 ACCACTACTGGCCCTACAAT 58.033 50.000 0.00 0.00 42.08 2.71
672 689 1.349688 CAACCACTACTGGCCCTACAA 59.650 52.381 0.00 0.00 42.08 2.41
673 690 0.981183 CAACCACTACTGGCCCTACA 59.019 55.000 0.00 0.00 42.08 2.74
674 691 0.981943 ACAACCACTACTGGCCCTAC 59.018 55.000 0.00 0.00 42.08 3.18
675 692 1.626825 GAACAACCACTACTGGCCCTA 59.373 52.381 0.00 0.00 42.08 3.53
676 693 0.400594 GAACAACCACTACTGGCCCT 59.599 55.000 0.00 0.00 42.08 5.19
677 694 0.953960 CGAACAACCACTACTGGCCC 60.954 60.000 0.00 0.00 42.08 5.80
678 695 0.953960 CCGAACAACCACTACTGGCC 60.954 60.000 0.00 0.00 42.08 5.36
679 696 0.250166 ACCGAACAACCACTACTGGC 60.250 55.000 0.00 0.00 42.08 4.85
680 697 1.508632 CACCGAACAACCACTACTGG 58.491 55.000 0.00 0.00 44.26 4.00
681 698 1.202604 ACCACCGAACAACCACTACTG 60.203 52.381 0.00 0.00 0.00 2.74
682 699 1.069668 GACCACCGAACAACCACTACT 59.930 52.381 0.00 0.00 0.00 2.57
683 700 1.069668 AGACCACCGAACAACCACTAC 59.930 52.381 0.00 0.00 0.00 2.73
684 701 1.416243 AGACCACCGAACAACCACTA 58.584 50.000 0.00 0.00 0.00 2.74
685 702 1.343465 CTAGACCACCGAACAACCACT 59.657 52.381 0.00 0.00 0.00 4.00
686 703 1.342174 TCTAGACCACCGAACAACCAC 59.658 52.381 0.00 0.00 0.00 4.16
687 704 1.707106 TCTAGACCACCGAACAACCA 58.293 50.000 0.00 0.00 0.00 3.67
688 705 2.825861 TTCTAGACCACCGAACAACC 57.174 50.000 0.00 0.00 0.00 3.77
689 706 4.566987 AGATTTCTAGACCACCGAACAAC 58.433 43.478 0.00 0.00 0.00 3.32
690 707 4.884668 AGATTTCTAGACCACCGAACAA 57.115 40.909 0.00 0.00 0.00 2.83
691 708 4.884668 AAGATTTCTAGACCACCGAACA 57.115 40.909 0.00 0.00 0.00 3.18
692 709 6.817140 ACATTAAGATTTCTAGACCACCGAAC 59.183 38.462 0.00 0.00 0.00 3.95
693 710 6.942976 ACATTAAGATTTCTAGACCACCGAA 58.057 36.000 0.00 0.00 0.00 4.30
694 711 6.540438 ACATTAAGATTTCTAGACCACCGA 57.460 37.500 0.00 0.00 0.00 4.69
695 712 8.888579 ATTACATTAAGATTTCTAGACCACCG 57.111 34.615 0.00 0.00 0.00 4.94
792 810 7.939784 ATGGTCTTTTCAAACTATAAGGACC 57.060 36.000 0.00 0.00 0.00 4.46
793 811 8.244113 CCAATGGTCTTTTCAAACTATAAGGAC 58.756 37.037 0.00 0.00 0.00 3.85
794 812 7.093945 GCCAATGGTCTTTTCAAACTATAAGGA 60.094 37.037 0.00 0.00 0.00 3.36
795 813 7.035612 GCCAATGGTCTTTTCAAACTATAAGG 58.964 38.462 0.00 0.00 0.00 2.69
796 814 7.035612 GGCCAATGGTCTTTTCAAACTATAAG 58.964 38.462 0.00 0.00 0.00 1.73
798 816 5.420739 GGGCCAATGGTCTTTTCAAACTATA 59.579 40.000 4.39 0.00 0.00 1.31
799 817 4.222810 GGGCCAATGGTCTTTTCAAACTAT 59.777 41.667 4.39 0.00 0.00 2.12
802 820 2.549992 GGGGCCAATGGTCTTTTCAAAC 60.550 50.000 4.39 0.00 0.00 2.93
820 838 5.178061 GCCACATTTCTTCTTAATTTGGGG 58.822 41.667 0.00 0.00 34.74 4.96
838 856 3.138884 TCTTTGCATTCTAGTGCCACA 57.861 42.857 0.00 0.00 44.43 4.17
839 857 4.503741 TTTCTTTGCATTCTAGTGCCAC 57.496 40.909 3.12 0.00 44.43 5.01
840 858 4.584325 ACTTTTCTTTGCATTCTAGTGCCA 59.416 37.500 3.12 0.00 44.43 4.92
841 859 5.126396 ACTTTTCTTTGCATTCTAGTGCC 57.874 39.130 3.12 0.00 44.43 5.01
843 861 6.358030 CACGAACTTTTCTTTGCATTCTAGTG 59.642 38.462 0.00 0.00 0.00 2.74
844 862 6.260050 TCACGAACTTTTCTTTGCATTCTAGT 59.740 34.615 0.00 0.00 0.00 2.57
845 863 6.658831 TCACGAACTTTTCTTTGCATTCTAG 58.341 36.000 0.00 0.00 0.00 2.43
846 864 6.612247 TCACGAACTTTTCTTTGCATTCTA 57.388 33.333 0.00 0.00 0.00 2.10
847 865 5.499139 TCACGAACTTTTCTTTGCATTCT 57.501 34.783 0.00 0.00 0.00 2.40
848 866 6.567769 TTTCACGAACTTTTCTTTGCATTC 57.432 33.333 0.00 0.00 0.00 2.67
849 867 6.959671 TTTTCACGAACTTTTCTTTGCATT 57.040 29.167 0.00 0.00 0.00 3.56
850 868 6.959671 TTTTTCACGAACTTTTCTTTGCAT 57.040 29.167 0.00 0.00 0.00 3.96
876 894 1.674359 ATGTGTGGACTTTCGTTGCA 58.326 45.000 0.00 0.00 0.00 4.08
877 895 4.201783 GGTATATGTGTGGACTTTCGTTGC 60.202 45.833 0.00 0.00 0.00 4.17
878 896 4.932799 TGGTATATGTGTGGACTTTCGTTG 59.067 41.667 0.00 0.00 0.00 4.10
879 897 4.933400 GTGGTATATGTGTGGACTTTCGTT 59.067 41.667 0.00 0.00 0.00 3.85
880 898 4.501071 GTGGTATATGTGTGGACTTTCGT 58.499 43.478 0.00 0.00 0.00 3.85
881 899 3.550275 CGTGGTATATGTGTGGACTTTCG 59.450 47.826 0.00 0.00 0.00 3.46
882 900 3.308866 GCGTGGTATATGTGTGGACTTTC 59.691 47.826 0.00 0.00 0.00 2.62
940 968 1.374252 GGGCGCGGGTGTATCTATG 60.374 63.158 8.83 0.00 0.00 2.23
1349 1427 0.390340 GTCGATCTCTTGCTGTGCCA 60.390 55.000 0.00 0.00 0.00 4.92
1359 1437 2.544694 GCGGATGAACATGTCGATCTCT 60.545 50.000 0.00 0.00 0.00 3.10
1504 1614 7.885297 TGAAATTAGTGATTTTCCTCAACCAG 58.115 34.615 0.00 0.00 38.06 4.00
1507 1631 7.752686 GCTCTGAAATTAGTGATTTTCCTCAAC 59.247 37.037 0.00 0.00 38.06 3.18
1511 1635 6.173339 TCGCTCTGAAATTAGTGATTTTCCT 58.827 36.000 0.00 0.00 38.06 3.36
1518 1642 8.547967 AAGTAAAATCGCTCTGAAATTAGTGA 57.452 30.769 0.00 0.00 36.72 3.41
1655 1873 0.539901 TCCCCCGTAGCTCTAGCATC 60.540 60.000 4.54 0.00 45.16 3.91
1717 1935 3.398967 CCTCATTCCCCCAATCTCCAATA 59.601 47.826 0.00 0.00 0.00 1.90
1727 1945 1.696314 GTAGCCCCTCATTCCCCCA 60.696 63.158 0.00 0.00 0.00 4.96
1728 1946 1.696314 TGTAGCCCCTCATTCCCCC 60.696 63.158 0.00 0.00 0.00 5.40
1729 1947 1.839894 CTGTAGCCCCTCATTCCCC 59.160 63.158 0.00 0.00 0.00 4.81
1730 1948 1.149401 GCTGTAGCCCCTCATTCCC 59.851 63.158 0.00 0.00 34.31 3.97
1731 1949 1.424638 TAGCTGTAGCCCCTCATTCC 58.575 55.000 0.00 0.00 43.38 3.01
1732 1950 2.485657 GGTTAGCTGTAGCCCCTCATTC 60.486 54.545 0.00 0.00 43.38 2.67
1733 1951 1.490910 GGTTAGCTGTAGCCCCTCATT 59.509 52.381 0.00 0.00 43.38 2.57
1734 1952 1.132500 GGTTAGCTGTAGCCCCTCAT 58.868 55.000 0.00 0.00 43.38 2.90
1735 1953 0.042731 AGGTTAGCTGTAGCCCCTCA 59.957 55.000 0.00 0.00 43.38 3.86
1736 1954 0.753867 GAGGTTAGCTGTAGCCCCTC 59.246 60.000 14.91 14.91 43.38 4.30
1737 1955 0.042731 TGAGGTTAGCTGTAGCCCCT 59.957 55.000 0.00 3.83 43.38 4.79
1738 1956 0.909623 TTGAGGTTAGCTGTAGCCCC 59.090 55.000 0.00 0.00 43.38 5.80
1739 1957 2.170607 TGATTGAGGTTAGCTGTAGCCC 59.829 50.000 0.00 0.00 43.38 5.19
1740 1958 3.543680 TGATTGAGGTTAGCTGTAGCC 57.456 47.619 0.00 0.00 43.38 3.93
1741 1959 5.601662 TGTATGATTGAGGTTAGCTGTAGC 58.398 41.667 0.00 0.00 42.49 3.58
1742 1960 8.147058 AGATTGTATGATTGAGGTTAGCTGTAG 58.853 37.037 0.00 0.00 0.00 2.74
1910 2439 8.637099 TCAAACAAATTCATTGATCTGGTGTAA 58.363 29.630 0.00 0.00 41.85 2.41
1972 2539 7.756722 AGGAAAAATCATGCTTATTGACGAAAG 59.243 33.333 0.00 0.00 0.00 2.62
1973 2540 7.601856 AGGAAAAATCATGCTTATTGACGAAA 58.398 30.769 0.00 0.00 0.00 3.46
1976 2543 6.808212 ACAAGGAAAAATCATGCTTATTGACG 59.192 34.615 0.00 0.00 0.00 4.35
2053 2655 8.839310 AGCCTAATGCATTTTAGTCTGTATAG 57.161 34.615 18.75 3.89 44.83 1.31
2064 2666 3.444029 AGTGGGAAGCCTAATGCATTTT 58.556 40.909 18.75 5.44 44.83 1.82
2073 2683 4.162320 CAGTCATAAGAAGTGGGAAGCCTA 59.838 45.833 0.00 0.00 0.00 3.93
2075 2685 3.274288 CAGTCATAAGAAGTGGGAAGCC 58.726 50.000 0.00 0.00 0.00 4.35
2077 2687 5.551233 TCAACAGTCATAAGAAGTGGGAAG 58.449 41.667 0.00 0.00 0.00 3.46
2109 4211 3.023119 TCATCATTAATGTGCCACCCAC 58.977 45.455 14.97 0.00 44.90 4.61
2142 4245 7.703197 TCCAAAGATTTTGTTCGAAACCTAAAC 59.297 33.333 0.00 0.00 0.00 2.01
2153 4256 5.901552 TGGTCAACTCCAAAGATTTTGTTC 58.098 37.500 1.40 0.00 34.24 3.18
2172 4275 2.491693 TCCTTGAATGCGGATTTTGGTC 59.508 45.455 2.86 0.00 0.00 4.02
2181 4284 1.134699 TCAGTAGCTCCTTGAATGCGG 60.135 52.381 0.00 0.00 0.00 5.69
2258 4365 1.404986 CGAGTCCACGATTAAGCCCAA 60.405 52.381 0.00 0.00 35.09 4.12
2261 4368 0.458669 TCCGAGTCCACGATTAAGCC 59.541 55.000 0.00 0.00 35.09 4.35
2278 4385 9.606631 CTTAAGCCTATTAGATTCCATACATCC 57.393 37.037 0.00 0.00 0.00 3.51
2285 4400 9.342308 CATGAAACTTAAGCCTATTAGATTCCA 57.658 33.333 1.29 0.00 0.00 3.53
2290 4405 9.905713 ATTGACATGAAACTTAAGCCTATTAGA 57.094 29.630 0.00 0.00 0.00 2.10
2323 4438 8.078596 CGAAGAAATTCTGAAATCCTTGAAACT 58.921 33.333 0.00 0.00 0.00 2.66
2496 4720 5.570320 AGGGAGTACATGTACAATTGCTTT 58.430 37.500 32.02 13.26 38.48 3.51
2504 4728 2.519771 ACGGAGGGAGTACATGTACA 57.480 50.000 32.02 0.00 38.48 2.90
2505 4729 3.429960 GGAAACGGAGGGAGTACATGTAC 60.430 52.174 25.51 25.51 36.35 2.90
2514 4832 2.565834 TCTAAAGTGGAAACGGAGGGAG 59.434 50.000 0.00 0.00 0.00 4.30
2516 4834 2.302157 AGTCTAAAGTGGAAACGGAGGG 59.698 50.000 0.00 0.00 0.00 4.30
2517 4835 3.679824 AGTCTAAAGTGGAAACGGAGG 57.320 47.619 0.00 0.00 0.00 4.30
2520 4838 5.514204 CGTATGTAGTCTAAAGTGGAAACGG 59.486 44.000 0.00 0.00 0.00 4.44
2521 4839 5.514204 CCGTATGTAGTCTAAAGTGGAAACG 59.486 44.000 0.00 0.00 0.00 3.60
2522 4840 6.624423 TCCGTATGTAGTCTAAAGTGGAAAC 58.376 40.000 0.00 0.00 0.00 2.78
2523 4841 6.626623 GCTCCGTATGTAGTCTAAAGTGGAAA 60.627 42.308 0.00 0.00 0.00 3.13
2525 4843 4.337555 GCTCCGTATGTAGTCTAAAGTGGA 59.662 45.833 0.00 0.00 0.00 4.02
2527 4845 5.244785 TGCTCCGTATGTAGTCTAAAGTG 57.755 43.478 0.00 0.00 0.00 3.16
2528 4846 5.909621 TTGCTCCGTATGTAGTCTAAAGT 57.090 39.130 0.00 0.00 0.00 2.66
2530 4848 7.324935 TCATTTTGCTCCGTATGTAGTCTAAA 58.675 34.615 0.00 0.00 0.00 1.85
2531 4849 6.869695 TCATTTTGCTCCGTATGTAGTCTAA 58.130 36.000 0.00 0.00 0.00 2.10
2668 5051 5.362717 TCTCAAGTCCAGAACTGTAGTTTGA 59.637 40.000 0.00 5.13 38.58 2.69
2670 5053 5.871396 TCTCAAGTCCAGAACTGTAGTTT 57.129 39.130 0.00 0.00 38.58 2.66
2672 5055 5.871396 TTTCTCAAGTCCAGAACTGTAGT 57.129 39.130 1.18 0.00 38.58 2.73
2684 5072 6.560253 TGTGCTAAAGGAATTTCTCAAGTC 57.440 37.500 0.00 0.00 0.00 3.01
2718 5106 8.806429 TGTGTTTCATGTGATTACTAATGGAT 57.194 30.769 0.00 0.00 0.00 3.41
2730 5118 5.047731 TCCAGTTTGTTTGTGTTTCATGTGA 60.048 36.000 0.00 0.00 0.00 3.58
2895 5522 3.197116 CCTCTTCCATACGGGTACAAAGT 59.803 47.826 0.00 0.00 38.11 2.66
2923 5550 0.036765 CCGAACCTTGTGAATCCCGA 60.037 55.000 0.00 0.00 0.00 5.14
2942 5569 4.260170 AGCATCCAAGATCTGACAGAAAC 58.740 43.478 9.70 7.05 0.00 2.78
3439 6092 7.867921 TGATATGGAATTAGGGTTGTTGTAGT 58.132 34.615 0.00 0.00 0.00 2.73
3492 6157 8.641498 TTGGAATCTTTTCTTCTGCTCTAAAT 57.359 30.769 0.00 0.00 32.16 1.40
3747 6443 1.153939 CGTGCGCTCTTCTGCTAGT 60.154 57.895 9.73 0.00 0.00 2.57
3748 6444 0.865218 CTCGTGCGCTCTTCTGCTAG 60.865 60.000 9.73 0.00 0.00 3.42
3860 6629 8.853345 CCACTGAAAATGAAACAAAAGATATCG 58.147 33.333 0.00 0.00 0.00 2.92
4074 7047 2.380084 TCCCGTGAATGTGAACTAGC 57.620 50.000 0.00 0.00 0.00 3.42
4132 7105 1.973515 TGGACATGAGAGAACTGCAGT 59.026 47.619 15.25 15.25 0.00 4.40
4151 7124 6.074142 GCCTGAAATAGTTTTTCAACAAGCTG 60.074 38.462 9.58 0.00 37.89 4.24
4805 8043 3.193267 AGTTGCTGCTTGTCAAGTTGAAA 59.807 39.130 14.03 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.