Multiple sequence alignment - TraesCS5D01G184600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G184600 chr5D 100.000 4861 0 0 1 4861 286319376 286314516 0.000000e+00 8977.0
1 TraesCS5D01G184600 chr5B 91.243 3186 132 55 1158 4304 325541331 325544408 0.000000e+00 4202.0
2 TraesCS5D01G184600 chr5B 90.243 3085 129 68 334 3337 325540507 325543500 0.000000e+00 3871.0
3 TraesCS5D01G184600 chr5B 95.856 555 18 3 4309 4861 325544499 325545050 0.000000e+00 893.0
4 TraesCS5D01G184600 chr5A 94.068 1905 49 24 763 2657 378552181 378554031 0.000000e+00 2833.0
5 TraesCS5D01G184600 chr5A 92.232 1519 65 26 2739 4239 378554143 378555626 0.000000e+00 2102.0
6 TraesCS5D01G184600 chr5A 92.826 460 25 6 4409 4861 378557144 378557602 0.000000e+00 660.0
7 TraesCS5D01G184600 chr5A 82.888 374 19 13 334 688 378551705 378552052 1.320000e-75 294.0
8 TraesCS5D01G184600 chr5A 91.346 104 9 0 4309 4412 378556786 378556889 5.070000e-30 143.0
9 TraesCS5D01G184600 chr5A 95.946 74 3 0 4233 4306 378556624 378556697 2.380000e-23 121.0
10 TraesCS5D01G184600 chr5A 97.500 40 1 0 4184 4223 378555496 378555535 8.730000e-08 69.4
11 TraesCS5D01G184600 chr1D 93.438 320 16 4 8 327 6896794 6896480 2.050000e-128 470.0
12 TraesCS5D01G184600 chr6D 92.355 327 21 2 5 327 411473496 411473822 3.430000e-126 462.0
13 TraesCS5D01G184600 chr6D 91.768 328 22 3 4 326 458101044 458100717 7.420000e-123 451.0
14 TraesCS5D01G184600 chrUn 91.975 324 25 1 4 327 104044959 104045281 2.060000e-123 453.0
15 TraesCS5D01G184600 chr7D 91.768 328 23 2 4 327 586767509 586767836 2.060000e-123 453.0
16 TraesCS5D01G184600 chr7A 92.236 322 22 2 4 325 158400051 158399733 2.060000e-123 453.0
17 TraesCS5D01G184600 chr6B 91.692 325 26 1 3 327 703099508 703099185 2.670000e-122 449.0
18 TraesCS5D01G184600 chr6B 91.018 334 27 2 4 337 703049892 703049562 9.600000e-122 448.0
19 TraesCS5D01G184600 chr4A 91.131 327 25 2 4 326 621530230 621530556 1.610000e-119 440.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G184600 chr5D 286314516 286319376 4860 True 8977.000000 8977 100.000000 1 4861 1 chr5D.!!$R1 4860
1 TraesCS5D01G184600 chr5B 325540507 325545050 4543 False 2988.666667 4202 92.447333 334 4861 3 chr5B.!!$F1 4527
2 TraesCS5D01G184600 chr5A 378551705 378557602 5897 False 888.914286 2833 92.400857 334 4861 7 chr5A.!!$F1 4527

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
434 440 0.103208 GAAGGTCGATCATGGTCGCT 59.897 55.000 23.55 12.81 41.22 4.93 F
1079 1169 0.033991 TCCTCCTTCTCCTCCTCACG 60.034 60.000 0.00 0.00 0.00 4.35 F
1085 1175 0.040646 TTCTCCTCCTCACGCCCTTA 59.959 55.000 0.00 0.00 0.00 2.69 F
1087 1177 0.175989 CTCCTCCTCACGCCCTTAAC 59.824 60.000 0.00 0.00 0.00 2.01 F
1090 1180 0.391263 CTCCTCACGCCCTTAACCAC 60.391 60.000 0.00 0.00 0.00 4.16 F
1115 1205 0.614979 CCTTCCTTCCCTGGAGTCGA 60.615 60.000 0.00 0.00 37.43 4.20 F
3228 3461 1.003718 CAAGGAAGTGGGACGGACC 60.004 63.158 0.00 0.00 38.08 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2038 2169 1.810532 CTGGCTCTCGGTCAGGTAC 59.189 63.158 0.00 0.00 43.40 3.34 R
2882 3093 0.036448 TTTTGATCCGGCCGGTGTTA 59.964 50.000 41.57 25.10 36.47 2.41 R
3006 3220 1.137825 GTGCCTCCTCTCGAGTTCG 59.862 63.158 13.13 2.34 36.82 3.95 R
3009 3223 1.680651 CAGGTGCCTCCTCTCGAGT 60.681 63.158 13.13 0.00 46.24 4.18 R
3164 3394 9.520204 GATCAGAAAGATAAGAAACAGAGAGAG 57.480 37.037 0.00 0.00 37.00 3.20 R
3264 3497 1.751351 CTCTGGCTGGTTGAGACGATA 59.249 52.381 0.00 0.00 28.23 2.92 R
4707 6308 0.762082 TTTTCCTGCATGGGTTGGCA 60.762 50.000 0.00 0.00 38.52 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.021541 CGTGACATCTCAGGTCGTG 57.978 57.895 0.00 0.00 38.10 4.35
19 20 0.456824 CGTGACATCTCAGGTCGTGG 60.457 60.000 0.00 0.00 38.10 4.94
20 21 0.737715 GTGACATCTCAGGTCGTGGC 60.738 60.000 0.00 0.00 38.10 5.01
21 22 1.153549 GACATCTCAGGTCGTGGCC 60.154 63.158 0.00 0.00 0.00 5.36
22 23 2.187946 CATCTCAGGTCGTGGCCC 59.812 66.667 0.00 0.00 0.00 5.80
23 24 2.039624 ATCTCAGGTCGTGGCCCT 59.960 61.111 0.00 0.00 0.00 5.19
24 25 1.043116 CATCTCAGGTCGTGGCCCTA 61.043 60.000 0.00 0.00 0.00 3.53
25 26 1.043673 ATCTCAGGTCGTGGCCCTAC 61.044 60.000 0.00 0.00 0.00 3.18
26 27 2.682494 TCAGGTCGTGGCCCTACC 60.682 66.667 0.00 5.06 39.84 3.18
27 28 2.683933 CAGGTCGTGGCCCTACCT 60.684 66.667 13.58 13.58 44.54 3.08
28 29 2.683933 AGGTCGTGGCCCTACCTG 60.684 66.667 17.50 0.00 42.08 4.00
29 30 3.001406 GGTCGTGGCCCTACCTGT 61.001 66.667 0.00 0.00 40.22 4.00
30 31 2.577593 GTCGTGGCCCTACCTGTC 59.422 66.667 0.00 0.00 40.22 3.51
31 32 2.118732 TCGTGGCCCTACCTGTCA 59.881 61.111 0.00 0.00 40.22 3.58
32 33 1.534476 TCGTGGCCCTACCTGTCAA 60.534 57.895 0.00 0.00 40.22 3.18
33 34 1.122632 TCGTGGCCCTACCTGTCAAA 61.123 55.000 0.00 0.00 40.22 2.69
34 35 0.673644 CGTGGCCCTACCTGTCAAAG 60.674 60.000 0.00 0.00 40.22 2.77
35 36 0.690762 GTGGCCCTACCTGTCAAAGA 59.309 55.000 0.00 0.00 40.22 2.52
36 37 0.690762 TGGCCCTACCTGTCAAAGAC 59.309 55.000 0.00 0.00 40.22 3.01
37 38 0.984995 GGCCCTACCTGTCAAAGACT 59.015 55.000 0.00 0.00 33.15 3.24
38 39 1.066071 GGCCCTACCTGTCAAAGACTC 60.066 57.143 0.00 0.00 33.15 3.36
39 40 1.903183 GCCCTACCTGTCAAAGACTCT 59.097 52.381 0.00 0.00 33.15 3.24
40 41 2.093921 GCCCTACCTGTCAAAGACTCTC 60.094 54.545 0.00 0.00 33.15 3.20
41 42 2.498078 CCCTACCTGTCAAAGACTCTCC 59.502 54.545 0.00 0.00 33.15 3.71
42 43 2.164624 CCTACCTGTCAAAGACTCTCCG 59.835 54.545 0.00 0.00 33.15 4.63
43 44 1.705873 ACCTGTCAAAGACTCTCCGT 58.294 50.000 0.00 0.00 33.15 4.69
44 45 2.040178 ACCTGTCAAAGACTCTCCGTT 58.960 47.619 0.00 0.00 33.15 4.44
45 46 2.036089 ACCTGTCAAAGACTCTCCGTTC 59.964 50.000 0.00 0.00 33.15 3.95
46 47 2.610727 CCTGTCAAAGACTCTCCGTTCC 60.611 54.545 0.00 0.00 33.15 3.62
47 48 2.297597 CTGTCAAAGACTCTCCGTTCCT 59.702 50.000 0.00 0.00 33.15 3.36
48 49 2.035961 TGTCAAAGACTCTCCGTTCCTG 59.964 50.000 0.00 0.00 33.15 3.86
49 50 2.296471 GTCAAAGACTCTCCGTTCCTGA 59.704 50.000 0.00 0.00 0.00 3.86
50 51 2.296471 TCAAAGACTCTCCGTTCCTGAC 59.704 50.000 0.00 0.00 0.00 3.51
51 52 1.258676 AAGACTCTCCGTTCCTGACC 58.741 55.000 0.00 0.00 0.00 4.02
52 53 0.961358 AGACTCTCCGTTCCTGACCG 60.961 60.000 0.00 0.00 0.00 4.79
53 54 1.935327 GACTCTCCGTTCCTGACCGG 61.935 65.000 0.00 0.00 45.55 5.28
54 55 1.977544 CTCTCCGTTCCTGACCGGT 60.978 63.158 6.92 6.92 44.51 5.28
55 56 0.679002 CTCTCCGTTCCTGACCGGTA 60.679 60.000 7.34 0.00 44.51 4.02
56 57 0.251297 TCTCCGTTCCTGACCGGTAA 60.251 55.000 7.34 0.00 44.51 2.85
57 58 0.604578 CTCCGTTCCTGACCGGTAAA 59.395 55.000 7.34 0.00 44.51 2.01
58 59 1.001181 CTCCGTTCCTGACCGGTAAAA 59.999 52.381 7.34 0.00 44.51 1.52
59 60 1.415659 TCCGTTCCTGACCGGTAAAAA 59.584 47.619 7.34 0.00 44.51 1.94
60 61 1.802365 CCGTTCCTGACCGGTAAAAAG 59.198 52.381 7.34 2.76 39.38 2.27
61 62 2.548493 CCGTTCCTGACCGGTAAAAAGA 60.548 50.000 7.34 0.00 39.38 2.52
62 63 3.132925 CGTTCCTGACCGGTAAAAAGAA 58.867 45.455 7.34 3.84 0.00 2.52
63 64 3.185797 CGTTCCTGACCGGTAAAAAGAAG 59.814 47.826 7.34 0.00 0.00 2.85
64 65 2.774687 TCCTGACCGGTAAAAAGAAGC 58.225 47.619 7.34 0.00 0.00 3.86
65 66 1.463444 CCTGACCGGTAAAAAGAAGCG 59.537 52.381 7.34 0.00 37.58 4.68
66 67 0.869730 TGACCGGTAAAAAGAAGCGC 59.130 50.000 7.34 0.00 36.56 5.92
67 68 0.869730 GACCGGTAAAAAGAAGCGCA 59.130 50.000 7.34 0.00 36.56 6.09
68 69 1.467342 GACCGGTAAAAAGAAGCGCAT 59.533 47.619 7.34 0.00 36.56 4.73
69 70 2.674357 GACCGGTAAAAAGAAGCGCATA 59.326 45.455 7.34 0.00 36.56 3.14
70 71 2.676342 ACCGGTAAAAAGAAGCGCATAG 59.324 45.455 4.49 0.00 36.56 2.23
71 72 2.031683 CCGGTAAAAAGAAGCGCATAGG 59.968 50.000 11.47 0.00 36.56 2.57
72 73 2.933906 CGGTAAAAAGAAGCGCATAGGA 59.066 45.455 11.47 0.00 0.00 2.94
73 74 3.001330 CGGTAAAAAGAAGCGCATAGGAG 59.999 47.826 11.47 0.00 0.00 3.69
74 75 3.939592 GGTAAAAAGAAGCGCATAGGAGT 59.060 43.478 11.47 0.00 0.00 3.85
75 76 4.201822 GGTAAAAAGAAGCGCATAGGAGTG 60.202 45.833 11.47 0.00 0.00 3.51
76 77 3.334583 AAAAGAAGCGCATAGGAGTGA 57.665 42.857 11.47 0.00 0.00 3.41
77 78 2.593346 AAGAAGCGCATAGGAGTGAG 57.407 50.000 11.47 0.00 0.00 3.51
78 79 0.103937 AGAAGCGCATAGGAGTGAGC 59.896 55.000 11.47 0.00 43.95 4.26
80 81 4.334837 GCGCATAGGAGTGAGCTC 57.665 61.111 6.82 6.82 41.01 4.09
81 82 1.659954 GCGCATAGGAGTGAGCTCG 60.660 63.158 9.64 0.00 42.53 5.03
82 83 1.007964 CGCATAGGAGTGAGCTCGG 60.008 63.158 9.64 0.00 42.53 4.63
83 84 1.300542 GCATAGGAGTGAGCTCGGC 60.301 63.158 9.64 4.54 42.53 5.54
84 85 1.743321 GCATAGGAGTGAGCTCGGCT 61.743 60.000 9.64 9.81 43.88 5.52
93 94 3.465403 AGCTCGGCTCGGCTCAAT 61.465 61.111 5.30 0.00 30.62 2.57
94 95 2.964389 GCTCGGCTCGGCTCAATC 60.964 66.667 0.00 0.00 0.00 2.67
95 96 2.656651 CTCGGCTCGGCTCAATCG 60.657 66.667 0.00 0.00 0.00 3.34
96 97 4.873129 TCGGCTCGGCTCAATCGC 62.873 66.667 0.00 0.00 0.00 4.58
131 132 3.522731 CGTGCCGAGGAGGAGGAG 61.523 72.222 0.00 0.00 45.00 3.69
132 133 2.363147 GTGCCGAGGAGGAGGAGT 60.363 66.667 0.00 0.00 45.00 3.85
133 134 2.363018 TGCCGAGGAGGAGGAGTG 60.363 66.667 0.00 0.00 45.00 3.51
134 135 3.844090 GCCGAGGAGGAGGAGTGC 61.844 72.222 0.00 0.00 45.00 4.40
135 136 3.522731 CCGAGGAGGAGGAGTGCG 61.523 72.222 0.00 0.00 45.00 5.34
136 137 4.200283 CGAGGAGGAGGAGTGCGC 62.200 72.222 0.00 0.00 0.00 6.09
137 138 4.200283 GAGGAGGAGGAGTGCGCG 62.200 72.222 0.00 0.00 0.00 6.86
138 139 4.742649 AGGAGGAGGAGTGCGCGA 62.743 66.667 12.10 0.00 0.00 5.87
139 140 4.200283 GGAGGAGGAGTGCGCGAG 62.200 72.222 12.10 0.00 0.00 5.03
140 141 4.200283 GAGGAGGAGTGCGCGAGG 62.200 72.222 12.10 0.00 0.00 4.63
146 147 4.443266 GAGTGCGCGAGGGCTTCT 62.443 66.667 12.10 10.86 36.88 2.85
147 148 3.941657 GAGTGCGCGAGGGCTTCTT 62.942 63.158 12.10 0.00 36.88 2.52
148 149 3.050275 GTGCGCGAGGGCTTCTTT 61.050 61.111 12.10 0.00 36.88 2.52
149 150 2.281484 TGCGCGAGGGCTTCTTTT 60.281 55.556 12.10 0.00 36.88 2.27
150 151 2.325082 TGCGCGAGGGCTTCTTTTC 61.325 57.895 12.10 0.00 36.88 2.29
151 152 2.035442 GCGCGAGGGCTTCTTTTCT 61.035 57.895 12.10 0.00 36.88 2.52
152 153 1.578206 GCGCGAGGGCTTCTTTTCTT 61.578 55.000 12.10 0.00 36.88 2.52
153 154 0.444260 CGCGAGGGCTTCTTTTCTTC 59.556 55.000 0.00 0.00 36.88 2.87
154 155 1.814793 GCGAGGGCTTCTTTTCTTCT 58.185 50.000 0.00 0.00 35.83 2.85
155 156 1.466558 GCGAGGGCTTCTTTTCTTCTG 59.533 52.381 0.00 0.00 35.83 3.02
156 157 2.872038 GCGAGGGCTTCTTTTCTTCTGA 60.872 50.000 0.00 0.00 35.83 3.27
157 158 3.403038 CGAGGGCTTCTTTTCTTCTGAA 58.597 45.455 0.00 0.00 0.00 3.02
158 159 3.434984 CGAGGGCTTCTTTTCTTCTGAAG 59.565 47.826 11.18 11.18 39.88 3.02
159 160 4.393834 GAGGGCTTCTTTTCTTCTGAAGT 58.606 43.478 16.43 0.00 39.30 3.01
160 161 4.797743 AGGGCTTCTTTTCTTCTGAAGTT 58.202 39.130 16.43 0.00 39.30 2.66
161 162 4.824537 AGGGCTTCTTTTCTTCTGAAGTTC 59.175 41.667 16.43 0.00 39.30 3.01
162 163 4.022762 GGGCTTCTTTTCTTCTGAAGTTCC 60.023 45.833 16.43 7.54 39.30 3.62
163 164 4.580580 GGCTTCTTTTCTTCTGAAGTTCCA 59.419 41.667 16.43 0.00 39.30 3.53
164 165 5.067805 GGCTTCTTTTCTTCTGAAGTTCCAA 59.932 40.000 16.43 1.59 39.30 3.53
165 166 6.239148 GGCTTCTTTTCTTCTGAAGTTCCAAT 60.239 38.462 16.43 0.00 39.30 3.16
166 167 7.040409 GGCTTCTTTTCTTCTGAAGTTCCAATA 60.040 37.037 16.43 0.00 39.30 1.90
167 168 8.020244 GCTTCTTTTCTTCTGAAGTTCCAATAG 58.980 37.037 16.43 8.45 39.30 1.73
168 169 7.440523 TCTTTTCTTCTGAAGTTCCAATAGC 57.559 36.000 16.43 0.00 33.28 2.97
169 170 6.998074 TCTTTTCTTCTGAAGTTCCAATAGCA 59.002 34.615 16.43 0.00 33.28 3.49
170 171 6.560253 TTTCTTCTGAAGTTCCAATAGCAC 57.440 37.500 16.43 0.00 33.28 4.40
171 172 4.245660 TCTTCTGAAGTTCCAATAGCACG 58.754 43.478 16.43 0.00 0.00 5.34
172 173 3.953712 TCTGAAGTTCCAATAGCACGA 57.046 42.857 0.00 0.00 0.00 4.35
173 174 3.849911 TCTGAAGTTCCAATAGCACGAG 58.150 45.455 0.00 0.00 0.00 4.18
174 175 2.932614 CTGAAGTTCCAATAGCACGAGG 59.067 50.000 0.00 0.00 0.00 4.63
175 176 2.280628 GAAGTTCCAATAGCACGAGGG 58.719 52.381 0.00 0.00 0.00 4.30
176 177 1.568504 AGTTCCAATAGCACGAGGGA 58.431 50.000 0.00 0.00 0.00 4.20
177 178 1.482593 AGTTCCAATAGCACGAGGGAG 59.517 52.381 0.00 0.00 0.00 4.30
178 179 1.480954 GTTCCAATAGCACGAGGGAGA 59.519 52.381 0.00 0.00 0.00 3.71
179 180 1.403814 TCCAATAGCACGAGGGAGAG 58.596 55.000 0.00 0.00 0.00 3.20
180 181 1.063942 TCCAATAGCACGAGGGAGAGA 60.064 52.381 0.00 0.00 0.00 3.10
181 182 1.757118 CCAATAGCACGAGGGAGAGAA 59.243 52.381 0.00 0.00 0.00 2.87
182 183 2.366916 CCAATAGCACGAGGGAGAGAAT 59.633 50.000 0.00 0.00 0.00 2.40
183 184 3.553922 CCAATAGCACGAGGGAGAGAATC 60.554 52.174 0.00 0.00 0.00 2.52
197 198 6.502074 GGAGAGAATCCCTTATAAACCACT 57.498 41.667 0.00 0.00 43.01 4.00
198 199 6.526526 GGAGAGAATCCCTTATAAACCACTC 58.473 44.000 0.00 0.00 43.01 3.51
199 200 6.464607 GGAGAGAATCCCTTATAAACCACTCC 60.465 46.154 0.00 0.00 43.01 3.85
200 201 5.970640 AGAGAATCCCTTATAAACCACTCCA 59.029 40.000 0.00 0.00 33.66 3.86
201 202 6.447084 AGAGAATCCCTTATAAACCACTCCAA 59.553 38.462 0.00 0.00 33.66 3.53
202 203 6.424032 AGAATCCCTTATAAACCACTCCAAC 58.576 40.000 0.00 0.00 0.00 3.77
203 204 6.217693 AGAATCCCTTATAAACCACTCCAACT 59.782 38.462 0.00 0.00 0.00 3.16
204 205 5.431179 TCCCTTATAAACCACTCCAACTC 57.569 43.478 0.00 0.00 0.00 3.01
205 206 5.098663 TCCCTTATAAACCACTCCAACTCT 58.901 41.667 0.00 0.00 0.00 3.24
206 207 5.189145 TCCCTTATAAACCACTCCAACTCTC 59.811 44.000 0.00 0.00 0.00 3.20
207 208 5.429130 CCTTATAAACCACTCCAACTCTCC 58.571 45.833 0.00 0.00 0.00 3.71
208 209 5.189934 CCTTATAAACCACTCCAACTCTCCT 59.810 44.000 0.00 0.00 0.00 3.69
209 210 6.296489 CCTTATAAACCACTCCAACTCTCCTT 60.296 42.308 0.00 0.00 0.00 3.36
210 211 3.493767 AAACCACTCCAACTCTCCTTC 57.506 47.619 0.00 0.00 0.00 3.46
211 212 1.353091 ACCACTCCAACTCTCCTTCC 58.647 55.000 0.00 0.00 0.00 3.46
212 213 1.352083 CCACTCCAACTCTCCTTCCA 58.648 55.000 0.00 0.00 0.00 3.53
213 214 1.002544 CCACTCCAACTCTCCTTCCAC 59.997 57.143 0.00 0.00 0.00 4.02
214 215 1.974236 CACTCCAACTCTCCTTCCACT 59.026 52.381 0.00 0.00 0.00 4.00
215 216 2.370189 CACTCCAACTCTCCTTCCACTT 59.630 50.000 0.00 0.00 0.00 3.16
216 217 2.635427 ACTCCAACTCTCCTTCCACTTC 59.365 50.000 0.00 0.00 0.00 3.01
217 218 2.903135 CTCCAACTCTCCTTCCACTTCT 59.097 50.000 0.00 0.00 0.00 2.85
218 219 2.634940 TCCAACTCTCCTTCCACTTCTG 59.365 50.000 0.00 0.00 0.00 3.02
219 220 2.289945 CCAACTCTCCTTCCACTTCTGG 60.290 54.545 0.00 0.00 39.23 3.86
220 221 1.650528 ACTCTCCTTCCACTTCTGGG 58.349 55.000 0.00 0.00 38.25 4.45
221 222 0.908198 CTCTCCTTCCACTTCTGGGG 59.092 60.000 0.00 0.00 38.25 4.96
222 223 0.193574 TCTCCTTCCACTTCTGGGGT 59.806 55.000 0.00 0.00 38.25 4.95
223 224 0.326264 CTCCTTCCACTTCTGGGGTG 59.674 60.000 0.00 0.00 38.25 4.61
228 229 3.906980 CACTTCTGGGGTGGGACT 58.093 61.111 0.00 0.00 0.00 3.85
229 230 3.082619 CACTTCTGGGGTGGGACTA 57.917 57.895 0.00 0.00 0.00 2.59
230 231 1.358152 CACTTCTGGGGTGGGACTAA 58.642 55.000 0.00 0.00 0.00 2.24
231 232 1.702957 CACTTCTGGGGTGGGACTAAA 59.297 52.381 0.00 0.00 0.00 1.85
232 233 1.703513 ACTTCTGGGGTGGGACTAAAC 59.296 52.381 0.00 0.00 0.00 2.01
233 234 1.985895 CTTCTGGGGTGGGACTAAACT 59.014 52.381 0.00 0.00 0.00 2.66
234 235 2.127651 TCTGGGGTGGGACTAAACTT 57.872 50.000 0.00 0.00 0.00 2.66
235 236 2.424793 TCTGGGGTGGGACTAAACTTT 58.575 47.619 0.00 0.00 0.00 2.66
236 237 2.787035 TCTGGGGTGGGACTAAACTTTT 59.213 45.455 0.00 0.00 0.00 2.27
237 238 3.154710 CTGGGGTGGGACTAAACTTTTC 58.845 50.000 0.00 0.00 0.00 2.29
238 239 2.514582 TGGGGTGGGACTAAACTTTTCA 59.485 45.455 0.00 0.00 0.00 2.69
239 240 2.889045 GGGGTGGGACTAAACTTTTCAC 59.111 50.000 0.00 0.00 0.00 3.18
240 241 2.889045 GGGTGGGACTAAACTTTTCACC 59.111 50.000 0.00 0.00 41.54 4.02
241 242 3.558033 GGTGGGACTAAACTTTTCACCA 58.442 45.455 0.00 0.00 41.78 4.17
242 243 3.317149 GGTGGGACTAAACTTTTCACCAC 59.683 47.826 0.00 0.00 44.73 4.16
243 244 3.317149 GTGGGACTAAACTTTTCACCACC 59.683 47.826 0.00 0.00 40.83 4.61
244 245 3.203487 TGGGACTAAACTTTTCACCACCT 59.797 43.478 0.00 0.00 0.00 4.00
245 246 4.212716 GGGACTAAACTTTTCACCACCTT 58.787 43.478 0.00 0.00 0.00 3.50
246 247 4.037565 GGGACTAAACTTTTCACCACCTTG 59.962 45.833 0.00 0.00 0.00 3.61
247 248 4.643334 GGACTAAACTTTTCACCACCTTGT 59.357 41.667 0.00 0.00 0.00 3.16
248 249 5.220989 GGACTAAACTTTTCACCACCTTGTC 60.221 44.000 0.00 0.00 0.00 3.18
249 250 5.258051 ACTAAACTTTTCACCACCTTGTCA 58.742 37.500 0.00 0.00 0.00 3.58
250 251 5.891551 ACTAAACTTTTCACCACCTTGTCAT 59.108 36.000 0.00 0.00 0.00 3.06
251 252 4.918810 AACTTTTCACCACCTTGTCATC 57.081 40.909 0.00 0.00 0.00 2.92
252 253 3.222603 ACTTTTCACCACCTTGTCATCC 58.777 45.455 0.00 0.00 0.00 3.51
253 254 2.286365 TTTCACCACCTTGTCATCCC 57.714 50.000 0.00 0.00 0.00 3.85
254 255 1.144691 TTCACCACCTTGTCATCCCA 58.855 50.000 0.00 0.00 0.00 4.37
255 256 0.400213 TCACCACCTTGTCATCCCAC 59.600 55.000 0.00 0.00 0.00 4.61
256 257 0.609131 CACCACCTTGTCATCCCACC 60.609 60.000 0.00 0.00 0.00 4.61
257 258 0.772124 ACCACCTTGTCATCCCACCT 60.772 55.000 0.00 0.00 0.00 4.00
258 259 1.285280 CCACCTTGTCATCCCACCTA 58.715 55.000 0.00 0.00 0.00 3.08
259 260 1.846439 CCACCTTGTCATCCCACCTAT 59.154 52.381 0.00 0.00 0.00 2.57
260 261 3.045634 CCACCTTGTCATCCCACCTATA 58.954 50.000 0.00 0.00 0.00 1.31
261 262 3.652869 CCACCTTGTCATCCCACCTATAT 59.347 47.826 0.00 0.00 0.00 0.86
262 263 4.505566 CCACCTTGTCATCCCACCTATATG 60.506 50.000 0.00 0.00 0.00 1.78
263 264 3.652869 ACCTTGTCATCCCACCTATATGG 59.347 47.826 0.00 0.00 42.93 2.74
274 275 5.011982 CCACCTATATGGGTCCTTAGAGA 57.988 47.826 7.98 0.00 41.11 3.10
275 276 5.594777 CCACCTATATGGGTCCTTAGAGAT 58.405 45.833 7.98 0.00 41.11 2.75
276 277 6.026186 CCACCTATATGGGTCCTTAGAGATT 58.974 44.000 7.98 0.00 41.11 2.40
277 278 7.189794 CCACCTATATGGGTCCTTAGAGATTA 58.810 42.308 7.98 0.00 41.11 1.75
278 279 7.678598 CCACCTATATGGGTCCTTAGAGATTAA 59.321 40.741 7.98 0.00 41.11 1.40
279 280 9.101325 CACCTATATGGGTCCTTAGAGATTAAA 57.899 37.037 7.98 0.00 41.11 1.52
280 281 9.860393 ACCTATATGGGTCCTTAGAGATTAAAT 57.140 33.333 4.64 0.00 41.11 1.40
284 285 7.937700 ATGGGTCCTTAGAGATTAAATCTGA 57.062 36.000 0.00 0.00 40.38 3.27
285 286 7.749377 TGGGTCCTTAGAGATTAAATCTGAA 57.251 36.000 0.00 0.00 40.38 3.02
286 287 8.158025 TGGGTCCTTAGAGATTAAATCTGAAA 57.842 34.615 0.00 0.00 40.38 2.69
287 288 8.781951 TGGGTCCTTAGAGATTAAATCTGAAAT 58.218 33.333 0.00 0.00 40.38 2.17
288 289 9.634021 GGGTCCTTAGAGATTAAATCTGAAATT 57.366 33.333 0.00 0.00 40.38 1.82
299 300 9.415544 GATTAAATCTGAAATTGTCATATGGGC 57.584 33.333 2.13 0.00 35.07 5.36
300 301 8.537728 TTAAATCTGAAATTGTCATATGGGCT 57.462 30.769 2.13 0.00 35.07 5.19
301 302 6.645790 AATCTGAAATTGTCATATGGGCTC 57.354 37.500 2.13 0.00 35.07 4.70
302 303 5.378230 TCTGAAATTGTCATATGGGCTCT 57.622 39.130 2.13 0.00 35.07 4.09
303 304 6.499106 TCTGAAATTGTCATATGGGCTCTA 57.501 37.500 2.13 0.00 35.07 2.43
304 305 6.528321 TCTGAAATTGTCATATGGGCTCTAG 58.472 40.000 2.13 0.00 35.07 2.43
305 306 5.624159 TGAAATTGTCATATGGGCTCTAGG 58.376 41.667 2.13 0.00 0.00 3.02
306 307 3.710209 ATTGTCATATGGGCTCTAGGC 57.290 47.619 2.13 0.00 40.90 3.93
319 320 4.566426 GCTCTAGGCCCATCTCATATTT 57.434 45.455 0.00 0.00 34.27 1.40
320 321 4.512484 GCTCTAGGCCCATCTCATATTTC 58.488 47.826 0.00 0.00 34.27 2.17
321 322 4.019860 GCTCTAGGCCCATCTCATATTTCA 60.020 45.833 0.00 0.00 34.27 2.69
322 323 5.513788 GCTCTAGGCCCATCTCATATTTCAA 60.514 44.000 0.00 0.00 34.27 2.69
323 324 5.869579 TCTAGGCCCATCTCATATTTCAAC 58.130 41.667 0.00 0.00 0.00 3.18
324 325 4.524802 AGGCCCATCTCATATTTCAACA 57.475 40.909 0.00 0.00 0.00 3.33
325 326 4.870636 AGGCCCATCTCATATTTCAACAA 58.129 39.130 0.00 0.00 0.00 2.83
326 327 5.461327 AGGCCCATCTCATATTTCAACAAT 58.539 37.500 0.00 0.00 0.00 2.71
327 328 5.901276 AGGCCCATCTCATATTTCAACAATT 59.099 36.000 0.00 0.00 0.00 2.32
328 329 6.384886 AGGCCCATCTCATATTTCAACAATTT 59.615 34.615 0.00 0.00 0.00 1.82
329 330 6.703165 GGCCCATCTCATATTTCAACAATTTC 59.297 38.462 0.00 0.00 0.00 2.17
330 331 6.703165 GCCCATCTCATATTTCAACAATTTCC 59.297 38.462 0.00 0.00 0.00 3.13
331 332 7.212274 CCCATCTCATATTTCAACAATTTCCC 58.788 38.462 0.00 0.00 0.00 3.97
332 333 7.212274 CCATCTCATATTTCAACAATTTCCCC 58.788 38.462 0.00 0.00 0.00 4.81
333 334 7.070322 CCATCTCATATTTCAACAATTTCCCCT 59.930 37.037 0.00 0.00 0.00 4.79
334 335 8.480501 CATCTCATATTTCAACAATTTCCCCTT 58.519 33.333 0.00 0.00 0.00 3.95
335 336 8.066612 TCTCATATTTCAACAATTTCCCCTTC 57.933 34.615 0.00 0.00 0.00 3.46
336 337 7.124147 TCTCATATTTCAACAATTTCCCCTTCC 59.876 37.037 0.00 0.00 0.00 3.46
337 338 4.908601 ATTTCAACAATTTCCCCTTCCC 57.091 40.909 0.00 0.00 0.00 3.97
338 339 2.319025 TCAACAATTTCCCCTTCCCC 57.681 50.000 0.00 0.00 0.00 4.81
339 340 1.505538 TCAACAATTTCCCCTTCCCCA 59.494 47.619 0.00 0.00 0.00 4.96
375 380 3.948719 GGGCACCGGTTGGAGTGA 61.949 66.667 2.97 0.00 40.86 3.41
434 440 0.103208 GAAGGTCGATCATGGTCGCT 59.897 55.000 23.55 12.81 41.22 4.93
501 523 1.721926 CTCAACCGCGAGAAGAAGTTC 59.278 52.381 8.23 0.00 34.79 3.01
509 531 2.354203 GCGAGAAGAAGTTCCATGTCCT 60.354 50.000 0.00 0.00 32.48 3.85
600 622 2.872388 CGCCCTATCGCCACCAGAT 61.872 63.158 0.00 0.00 0.00 2.90
622 644 0.608640 GAGAGCAGAAGGGGAAACGA 59.391 55.000 0.00 0.00 0.00 3.85
688 717 0.681564 GAGTCCAGGAGCGAGAAGGA 60.682 60.000 0.00 0.00 0.00 3.36
713 762 2.525629 GTTTGGGTTGGGTGGGGG 60.526 66.667 0.00 0.00 0.00 5.40
798 887 2.616842 ACACGGCCGGAATGAATATTTC 59.383 45.455 31.76 0.00 0.00 2.17
845 934 4.360405 GTTGGACCCGGCACCCAT 62.360 66.667 11.64 0.00 0.00 4.00
846 935 4.358841 TTGGACCCGGCACCCATG 62.359 66.667 11.64 0.00 0.00 3.66
1070 1160 3.855853 GCCGGCCTCCTCCTTCTC 61.856 72.222 18.11 0.00 0.00 2.87
1071 1161 3.157949 CCGGCCTCCTCCTTCTCC 61.158 72.222 0.00 0.00 0.00 3.71
1072 1162 2.042435 CGGCCTCCTCCTTCTCCT 60.042 66.667 0.00 0.00 0.00 3.69
1073 1163 2.131067 CGGCCTCCTCCTTCTCCTC 61.131 68.421 0.00 0.00 0.00 3.71
1074 1164 1.764454 GGCCTCCTCCTTCTCCTCC 60.764 68.421 0.00 0.00 0.00 4.30
1075 1165 1.313129 GCCTCCTCCTTCTCCTCCT 59.687 63.158 0.00 0.00 0.00 3.69
1076 1166 0.759060 GCCTCCTCCTTCTCCTCCTC 60.759 65.000 0.00 0.00 0.00 3.71
1077 1167 0.633921 CCTCCTCCTTCTCCTCCTCA 59.366 60.000 0.00 0.00 0.00 3.86
1078 1168 1.687996 CCTCCTCCTTCTCCTCCTCAC 60.688 61.905 0.00 0.00 0.00 3.51
1079 1169 0.033991 TCCTCCTTCTCCTCCTCACG 60.034 60.000 0.00 0.00 0.00 4.35
1080 1170 1.671901 CCTCCTTCTCCTCCTCACGC 61.672 65.000 0.00 0.00 0.00 5.34
1081 1171 1.671901 CTCCTTCTCCTCCTCACGCC 61.672 65.000 0.00 0.00 0.00 5.68
1082 1172 2.726351 CCTTCTCCTCCTCACGCCC 61.726 68.421 0.00 0.00 0.00 6.13
1083 1173 1.684049 CTTCTCCTCCTCACGCCCT 60.684 63.158 0.00 0.00 0.00 5.19
1084 1174 1.229209 TTCTCCTCCTCACGCCCTT 60.229 57.895 0.00 0.00 0.00 3.95
1085 1175 0.040646 TTCTCCTCCTCACGCCCTTA 59.959 55.000 0.00 0.00 0.00 2.69
1086 1176 0.040646 TCTCCTCCTCACGCCCTTAA 59.959 55.000 0.00 0.00 0.00 1.85
1087 1177 0.175989 CTCCTCCTCACGCCCTTAAC 59.824 60.000 0.00 0.00 0.00 2.01
1088 1178 1.221021 CCTCCTCACGCCCTTAACC 59.779 63.158 0.00 0.00 0.00 2.85
1089 1179 1.550130 CCTCCTCACGCCCTTAACCA 61.550 60.000 0.00 0.00 0.00 3.67
1090 1180 0.391263 CTCCTCACGCCCTTAACCAC 60.391 60.000 0.00 0.00 0.00 4.16
1091 1181 1.376812 CCTCACGCCCTTAACCACC 60.377 63.158 0.00 0.00 0.00 4.61
1092 1182 1.376812 CTCACGCCCTTAACCACCC 60.377 63.158 0.00 0.00 0.00 4.61
1093 1183 2.360726 CACGCCCTTAACCACCCC 60.361 66.667 0.00 0.00 0.00 4.95
1094 1184 4.024545 ACGCCCTTAACCACCCCG 62.025 66.667 0.00 0.00 0.00 5.73
1095 1185 4.789123 CGCCCTTAACCACCCCGG 62.789 72.222 0.00 0.00 42.50 5.73
1097 1187 4.435970 CCCTTAACCACCCCGGCC 62.436 72.222 0.00 0.00 39.03 6.13
1098 1188 3.335729 CCTTAACCACCCCGGCCT 61.336 66.667 0.00 0.00 39.03 5.19
1099 1189 2.761160 CTTAACCACCCCGGCCTT 59.239 61.111 0.00 0.00 39.03 4.35
1110 1200 3.009115 CGGCCTTCCTTCCCTGGA 61.009 66.667 0.00 0.00 0.00 3.86
1114 1204 1.901085 CCTTCCTTCCCTGGAGTCG 59.099 63.158 0.00 0.00 37.43 4.18
1115 1205 0.614979 CCTTCCTTCCCTGGAGTCGA 60.615 60.000 0.00 0.00 37.43 4.20
1750 1881 4.344865 GCCGTGGGCTTTCCTCCA 62.345 66.667 0.00 0.00 46.69 3.86
1755 1886 2.351276 GGGCTTTCCTCCAGCGAA 59.649 61.111 0.00 0.00 38.24 4.70
2208 2343 3.791245 TGTTGGAACTTGGAAATGTTGC 58.209 40.909 0.00 0.00 35.54 4.17
2284 2419 2.184322 GATTGCCGGAGCGACAGA 59.816 61.111 5.05 0.00 44.31 3.41
2387 2522 5.754778 CCAATTATTTCGGGTAATCGTTCC 58.245 41.667 0.00 0.00 0.00 3.62
2391 2526 2.282701 TTCGGGTAATCGTTCCTTCG 57.717 50.000 0.00 0.00 0.00 3.79
2417 2568 5.070580 TCTCCTATCGATCGATATGCTAGGA 59.929 44.000 30.71 30.71 36.62 2.94
2418 2569 5.681639 TCCTATCGATCGATATGCTAGGAA 58.318 41.667 30.79 19.98 33.75 3.36
2419 2570 6.120220 TCCTATCGATCGATATGCTAGGAAA 58.880 40.000 30.79 17.57 33.75 3.13
2439 2590 7.151976 AGGAAAAATGCTTATGCGTTAAGTTT 58.848 30.769 8.35 6.07 46.57 2.66
2440 2591 7.116233 AGGAAAAATGCTTATGCGTTAAGTTTG 59.884 33.333 8.35 0.00 46.57 2.93
2442 2593 7.707774 AAAATGCTTATGCGTTAAGTTTGTT 57.292 28.000 8.35 0.00 46.57 2.83
2443 2594 7.707774 AAATGCTTATGCGTTAAGTTTGTTT 57.292 28.000 8.35 3.14 46.57 2.83
2444 2595 6.689178 ATGCTTATGCGTTAAGTTTGTTTG 57.311 33.333 7.75 0.00 43.34 2.93
2445 2596 5.583495 TGCTTATGCGTTAAGTTTGTTTGT 58.417 33.333 7.75 0.00 43.34 2.83
2446 2597 6.037098 TGCTTATGCGTTAAGTTTGTTTGTT 58.963 32.000 7.75 0.00 43.34 2.83
2447 2598 6.020281 TGCTTATGCGTTAAGTTTGTTTGTTG 60.020 34.615 7.75 0.00 43.34 3.33
2448 2599 6.197468 GCTTATGCGTTAAGTTTGTTTGTTGA 59.803 34.615 7.75 0.00 39.67 3.18
2449 2600 7.096230 GCTTATGCGTTAAGTTTGTTTGTTGAT 60.096 33.333 7.75 0.00 39.67 2.57
2450 2601 9.388346 CTTATGCGTTAAGTTTGTTTGTTGATA 57.612 29.630 0.00 0.00 33.87 2.15
2630 2781 4.646572 CCAAAGCCTACAGAGAGAAAACT 58.353 43.478 0.00 0.00 0.00 2.66
2656 2807 7.502120 AATGCATCAATGAGAGGTAACATAC 57.498 36.000 0.00 0.00 41.41 2.39
2684 2835 6.613271 ACAATCCTACATACTCTTCATCCTGT 59.387 38.462 0.00 0.00 0.00 4.00
2855 3066 7.128418 TCCAGAGTTCTATCCAGGTACTACTAA 59.872 40.741 0.00 0.00 36.02 2.24
2882 3093 7.543756 AGTACTACAAACAACAATGCAGTTTT 58.456 30.769 0.00 0.00 33.54 2.43
3164 3394 1.528129 CTGCCAACTCCCAAGTCTTC 58.472 55.000 0.00 0.00 33.48 2.87
3228 3461 1.003718 CAAGGAAGTGGGACGGACC 60.004 63.158 0.00 0.00 38.08 4.46
3264 3497 2.941064 CACGGCTGATCAACTTGATGAT 59.059 45.455 9.08 0.00 42.62 2.45
3337 3570 1.743958 ACGATGACCAAGAGAGGTACG 59.256 52.381 0.00 0.00 43.38 3.67
3338 3571 1.743958 CGATGACCAAGAGAGGTACGT 59.256 52.381 0.00 0.00 43.38 3.57
3339 3572 2.941064 CGATGACCAAGAGAGGTACGTA 59.059 50.000 0.00 0.00 43.38 3.57
3340 3573 3.242673 CGATGACCAAGAGAGGTACGTAC 60.243 52.174 17.56 17.56 43.38 3.67
3366 3599 6.740110 ACTACTCACTAGTTTCTCAAGTGTG 58.260 40.000 0.00 0.00 41.12 3.82
3371 3604 6.270815 TCACTAGTTTCTCAAGTGTGTGTAC 58.729 40.000 0.00 0.00 41.12 2.90
3374 3607 5.991328 AGTTTCTCAAGTGTGTGTACATG 57.009 39.130 0.00 0.00 39.39 3.21
3377 3610 4.664150 TCTCAAGTGTGTGTACATGTGA 57.336 40.909 9.11 0.00 39.39 3.58
3378 3611 4.620982 TCTCAAGTGTGTGTACATGTGAG 58.379 43.478 9.11 6.48 44.12 3.51
3379 3612 4.099419 TCTCAAGTGTGTGTACATGTGAGT 59.901 41.667 9.11 0.00 43.69 3.41
3380 3613 5.300792 TCTCAAGTGTGTGTACATGTGAGTA 59.699 40.000 9.11 0.00 43.69 2.59
3381 3614 6.015434 TCTCAAGTGTGTGTACATGTGAGTAT 60.015 38.462 9.11 0.00 43.69 2.12
3383 3616 7.088272 TCAAGTGTGTGTACATGTGAGTATAC 58.912 38.462 9.11 0.00 39.39 1.47
3384 3617 6.835819 AGTGTGTGTACATGTGAGTATACT 57.164 37.500 9.11 4.68 39.39 2.12
3387 3620 8.967918 AGTGTGTGTACATGTGAGTATACTTAT 58.032 33.333 9.11 0.00 39.39 1.73
3404 3637 5.022282 ACTTATTTGCATTGCCATTACCC 57.978 39.130 6.12 0.00 0.00 3.69
3405 3638 4.716287 ACTTATTTGCATTGCCATTACCCT 59.284 37.500 6.12 0.00 0.00 4.34
3407 3640 1.193323 TTGCATTGCCATTACCCTGG 58.807 50.000 6.12 0.00 39.45 4.45
3408 3641 0.040942 TGCATTGCCATTACCCTGGT 59.959 50.000 6.12 0.00 38.63 4.00
3409 3642 0.461135 GCATTGCCATTACCCTGGTG 59.539 55.000 0.00 0.00 38.63 4.17
3410 3643 1.851304 CATTGCCATTACCCTGGTGT 58.149 50.000 0.00 0.00 38.63 4.16
3448 3687 4.698575 GTCCTTGTTCATCCTATGACTCC 58.301 47.826 0.00 0.00 39.39 3.85
3454 3693 6.288941 TGTTCATCCTATGACTCCGTTTTA 57.711 37.500 0.00 0.00 39.39 1.52
3455 3694 6.884832 TGTTCATCCTATGACTCCGTTTTAT 58.115 36.000 0.00 0.00 39.39 1.40
3456 3695 7.335627 TGTTCATCCTATGACTCCGTTTTATT 58.664 34.615 0.00 0.00 39.39 1.40
3464 3703 4.751060 TGACTCCGTTTTATTATCGCAGT 58.249 39.130 0.00 0.00 0.00 4.40
3545 3784 3.548770 CATATGAAGAGGCAGGCAAAGA 58.451 45.455 0.00 0.00 0.00 2.52
3573 3812 1.887198 CACGAACTACCACTCTGGACT 59.113 52.381 0.00 0.00 40.96 3.85
3687 3926 2.852449 TCTGTAGATAGAGGCGGACAG 58.148 52.381 0.00 0.00 36.48 3.51
3689 3928 2.811431 CTGTAGATAGAGGCGGACAGAG 59.189 54.545 0.00 0.00 37.14 3.35
3694 3933 0.898326 TAGAGGCGGACAGAGTGCAA 60.898 55.000 0.00 0.00 0.00 4.08
3803 4043 6.016360 CACATTCAAAATGGTGAGGACAGTTA 60.016 38.462 4.82 0.00 33.16 2.24
3883 4123 7.121168 CCAAATAGCTGTCCTGAAATAAGACAA 59.879 37.037 0.00 0.00 39.86 3.18
3962 4202 9.643693 CATGAAAAATAAACAGGAACATTAGCT 57.356 29.630 0.00 0.00 0.00 3.32
3965 4205 9.290483 GAAAAATAAACAGGAACATTAGCTAGC 57.710 33.333 6.62 6.62 0.00 3.42
4138 4378 8.587952 AGTTATTTTGTTTAGAATGCACAACC 57.412 30.769 0.00 0.00 30.12 3.77
4141 4381 7.656707 ATTTTGTTTAGAATGCACAACCATC 57.343 32.000 0.00 0.00 30.12 3.51
4143 4383 7.517614 TTTGTTTAGAATGCACAACCATCTA 57.482 32.000 0.00 0.00 30.12 1.98
4146 4386 6.149308 TGTTTAGAATGCACAACCATCTACAG 59.851 38.462 0.00 0.00 0.00 2.74
4194 4445 6.524101 TGACTGCAGTCTGTGTATAATGTA 57.476 37.500 38.81 17.51 44.99 2.29
4228 4479 6.058183 AGAAATGTGCATATAACTGGACCTC 58.942 40.000 0.00 0.00 36.72 3.85
4267 5522 4.982295 GCAAACATAGAACAAACCAGAACC 59.018 41.667 0.00 0.00 0.00 3.62
4268 5523 5.221244 GCAAACATAGAACAAACCAGAACCT 60.221 40.000 0.00 0.00 0.00 3.50
4306 5561 0.999406 CTCGTGCAGTATTCAACCGG 59.001 55.000 0.00 0.00 0.00 5.28
4398 5739 5.235516 CAACTAGGTTACTCGAAACACCAT 58.764 41.667 8.78 0.00 0.00 3.55
4622 6223 3.331889 AGAAAGACATTCCTCACCCATGT 59.668 43.478 0.00 0.00 38.94 3.21
4629 6230 3.304911 TTCCTCACCCATGTTGTTCAA 57.695 42.857 0.00 0.00 0.00 2.69
4721 6322 0.680618 TTTCTTGCCAACCCATGCAG 59.319 50.000 0.00 0.00 38.95 4.41
4801 6402 1.140407 GAAGCAATCGAGTCGGTCCG 61.140 60.000 13.54 4.39 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.456824 CCACGACCTGAGATGTCACG 60.457 60.000 0.00 0.57 32.91 4.35
1 2 0.737715 GCCACGACCTGAGATGTCAC 60.738 60.000 0.00 0.00 32.91 3.67
2 3 1.591703 GCCACGACCTGAGATGTCA 59.408 57.895 0.00 0.00 32.91 3.58
3 4 1.153549 GGCCACGACCTGAGATGTC 60.154 63.158 0.00 0.00 0.00 3.06
4 5 2.660064 GGGCCACGACCTGAGATGT 61.660 63.158 4.39 0.00 0.00 3.06
6 7 1.043673 GTAGGGCCACGACCTGAGAT 61.044 60.000 6.18 0.00 43.53 2.75
7 8 1.681327 GTAGGGCCACGACCTGAGA 60.681 63.158 6.18 0.00 43.53 3.27
8 9 2.722201 GGTAGGGCCACGACCTGAG 61.722 68.421 6.18 0.00 43.53 3.35
9 10 2.682494 GGTAGGGCCACGACCTGA 60.682 66.667 6.18 0.00 43.53 3.86
12 13 3.001406 ACAGGTAGGGCCACGACC 61.001 66.667 6.18 10.42 44.41 4.79
13 14 1.823169 TTGACAGGTAGGGCCACGAC 61.823 60.000 6.18 0.00 40.61 4.34
14 15 1.122632 TTTGACAGGTAGGGCCACGA 61.123 55.000 6.18 0.00 40.61 4.35
15 16 0.673644 CTTTGACAGGTAGGGCCACG 60.674 60.000 6.18 0.00 40.61 4.94
16 17 0.690762 TCTTTGACAGGTAGGGCCAC 59.309 55.000 6.18 1.40 40.61 5.01
17 18 0.690762 GTCTTTGACAGGTAGGGCCA 59.309 55.000 6.18 0.00 40.61 5.36
18 19 0.984995 AGTCTTTGACAGGTAGGGCC 59.015 55.000 0.00 0.00 34.60 5.80
19 20 1.903183 AGAGTCTTTGACAGGTAGGGC 59.097 52.381 0.46 0.00 34.60 5.19
20 21 2.498078 GGAGAGTCTTTGACAGGTAGGG 59.502 54.545 0.00 0.00 34.60 3.53
21 22 2.164624 CGGAGAGTCTTTGACAGGTAGG 59.835 54.545 0.00 0.00 34.60 3.18
22 23 2.820787 ACGGAGAGTCTTTGACAGGTAG 59.179 50.000 0.00 0.00 34.60 3.18
23 24 2.872732 ACGGAGAGTCTTTGACAGGTA 58.127 47.619 0.00 0.00 34.60 3.08
24 25 1.705873 ACGGAGAGTCTTTGACAGGT 58.294 50.000 0.00 0.00 34.60 4.00
25 26 2.610727 GGAACGGAGAGTCTTTGACAGG 60.611 54.545 0.00 0.00 34.60 4.00
26 27 2.297597 AGGAACGGAGAGTCTTTGACAG 59.702 50.000 0.00 0.00 34.60 3.51
27 28 2.035961 CAGGAACGGAGAGTCTTTGACA 59.964 50.000 0.00 0.00 34.60 3.58
28 29 2.296471 TCAGGAACGGAGAGTCTTTGAC 59.704 50.000 0.00 0.00 0.00 3.18
29 30 2.296471 GTCAGGAACGGAGAGTCTTTGA 59.704 50.000 0.00 0.00 30.07 2.69
30 31 2.610727 GGTCAGGAACGGAGAGTCTTTG 60.611 54.545 0.00 0.00 30.07 2.77
31 32 1.619332 GGTCAGGAACGGAGAGTCTTT 59.381 52.381 0.00 0.00 30.07 2.52
32 33 1.258676 GGTCAGGAACGGAGAGTCTT 58.741 55.000 0.00 0.00 30.07 3.01
33 34 0.961358 CGGTCAGGAACGGAGAGTCT 60.961 60.000 0.00 0.00 37.98 3.24
34 35 1.507174 CGGTCAGGAACGGAGAGTC 59.493 63.158 0.00 0.00 37.98 3.36
35 36 3.682792 CGGTCAGGAACGGAGAGT 58.317 61.111 0.00 0.00 37.98 3.24
41 42 2.758009 TCTTTTTACCGGTCAGGAACG 58.242 47.619 12.40 0.00 45.00 3.95
42 43 3.058432 GCTTCTTTTTACCGGTCAGGAAC 60.058 47.826 12.40 0.93 45.00 3.62
43 44 3.143728 GCTTCTTTTTACCGGTCAGGAA 58.856 45.455 12.40 8.05 45.00 3.36
44 45 2.774687 GCTTCTTTTTACCGGTCAGGA 58.225 47.619 12.40 0.00 45.00 3.86
46 47 1.136057 GCGCTTCTTTTTACCGGTCAG 60.136 52.381 12.40 3.17 0.00 3.51
47 48 0.869730 GCGCTTCTTTTTACCGGTCA 59.130 50.000 12.40 0.00 0.00 4.02
48 49 0.869730 TGCGCTTCTTTTTACCGGTC 59.130 50.000 12.40 0.00 0.00 4.79
49 50 1.530323 ATGCGCTTCTTTTTACCGGT 58.470 45.000 13.98 13.98 0.00 5.28
50 51 2.031683 CCTATGCGCTTCTTTTTACCGG 59.968 50.000 9.73 0.00 0.00 5.28
51 52 2.933906 TCCTATGCGCTTCTTTTTACCG 59.066 45.455 9.73 0.00 0.00 4.02
52 53 3.939592 ACTCCTATGCGCTTCTTTTTACC 59.060 43.478 9.73 0.00 0.00 2.85
53 54 4.630069 TCACTCCTATGCGCTTCTTTTTAC 59.370 41.667 9.73 0.00 0.00 2.01
54 55 4.827692 TCACTCCTATGCGCTTCTTTTTA 58.172 39.130 9.73 0.00 0.00 1.52
55 56 3.674997 TCACTCCTATGCGCTTCTTTTT 58.325 40.909 9.73 0.00 0.00 1.94
56 57 3.265791 CTCACTCCTATGCGCTTCTTTT 58.734 45.455 9.73 0.00 0.00 2.27
57 58 2.898705 CTCACTCCTATGCGCTTCTTT 58.101 47.619 9.73 0.00 0.00 2.52
58 59 1.472376 GCTCACTCCTATGCGCTTCTT 60.472 52.381 9.73 0.00 0.00 2.52
59 60 0.103937 GCTCACTCCTATGCGCTTCT 59.896 55.000 9.73 0.00 0.00 2.85
60 61 0.103937 AGCTCACTCCTATGCGCTTC 59.896 55.000 9.73 0.00 37.35 3.86
61 62 0.103937 GAGCTCACTCCTATGCGCTT 59.896 55.000 9.40 4.59 40.66 4.68
62 63 1.739049 GAGCTCACTCCTATGCGCT 59.261 57.895 9.40 0.00 43.20 5.92
63 64 1.659954 CGAGCTCACTCCTATGCGC 60.660 63.158 15.40 0.00 40.03 6.09
64 65 1.007964 CCGAGCTCACTCCTATGCG 60.008 63.158 15.40 0.00 40.03 4.73
65 66 1.300542 GCCGAGCTCACTCCTATGC 60.301 63.158 15.40 0.00 40.03 3.14
66 67 2.424474 AGCCGAGCTCACTCCTATG 58.576 57.895 15.40 0.00 40.03 2.23
76 77 3.438017 GATTGAGCCGAGCCGAGCT 62.438 63.158 9.16 9.16 43.88 4.09
77 78 2.964389 GATTGAGCCGAGCCGAGC 60.964 66.667 0.00 0.00 0.00 5.03
78 79 2.656651 CGATTGAGCCGAGCCGAG 60.657 66.667 0.00 0.00 0.00 4.63
79 80 4.873129 GCGATTGAGCCGAGCCGA 62.873 66.667 0.00 0.00 0.00 5.54
115 116 2.363147 ACTCCTCCTCCTCGGCAC 60.363 66.667 0.00 0.00 0.00 5.01
116 117 2.363018 CACTCCTCCTCCTCGGCA 60.363 66.667 0.00 0.00 0.00 5.69
117 118 3.844090 GCACTCCTCCTCCTCGGC 61.844 72.222 0.00 0.00 0.00 5.54
118 119 3.522731 CGCACTCCTCCTCCTCGG 61.523 72.222 0.00 0.00 0.00 4.63
119 120 4.200283 GCGCACTCCTCCTCCTCG 62.200 72.222 0.30 0.00 0.00 4.63
120 121 4.200283 CGCGCACTCCTCCTCCTC 62.200 72.222 8.75 0.00 0.00 3.71
121 122 4.742649 TCGCGCACTCCTCCTCCT 62.743 66.667 8.75 0.00 0.00 3.69
122 123 4.200283 CTCGCGCACTCCTCCTCC 62.200 72.222 8.75 0.00 0.00 4.30
123 124 4.200283 CCTCGCGCACTCCTCCTC 62.200 72.222 8.75 0.00 0.00 3.71
129 130 3.941657 AAGAAGCCCTCGCGCACTC 62.942 63.158 8.75 0.00 41.18 3.51
130 131 3.537206 AAAGAAGCCCTCGCGCACT 62.537 57.895 8.75 0.00 41.18 4.40
131 132 2.514505 GAAAAGAAGCCCTCGCGCAC 62.515 60.000 8.75 0.00 41.18 5.34
132 133 2.281484 AAAAGAAGCCCTCGCGCA 60.281 55.556 8.75 0.00 41.18 6.09
133 134 1.578206 AAGAAAAGAAGCCCTCGCGC 61.578 55.000 0.00 0.00 41.18 6.86
134 135 0.444260 GAAGAAAAGAAGCCCTCGCG 59.556 55.000 0.00 0.00 41.18 5.87
135 136 1.466558 CAGAAGAAAAGAAGCCCTCGC 59.533 52.381 0.00 0.00 0.00 5.03
136 137 3.045601 TCAGAAGAAAAGAAGCCCTCG 57.954 47.619 0.00 0.00 0.00 4.63
137 138 4.393834 ACTTCAGAAGAAAAGAAGCCCTC 58.606 43.478 17.56 0.00 41.80 4.30
138 139 4.445557 ACTTCAGAAGAAAAGAAGCCCT 57.554 40.909 17.56 0.00 41.80 5.19
139 140 4.022762 GGAACTTCAGAAGAAAAGAAGCCC 60.023 45.833 17.56 0.00 41.80 5.19
140 141 4.580580 TGGAACTTCAGAAGAAAAGAAGCC 59.419 41.667 17.56 6.36 41.80 4.35
141 142 5.757850 TGGAACTTCAGAAGAAAAGAAGC 57.242 39.130 17.56 0.00 41.80 3.86
142 143 8.020244 GCTATTGGAACTTCAGAAGAAAAGAAG 58.980 37.037 17.56 6.88 43.27 2.85
143 144 7.502226 TGCTATTGGAACTTCAGAAGAAAAGAA 59.498 33.333 17.56 3.50 32.35 2.52
144 145 6.998074 TGCTATTGGAACTTCAGAAGAAAAGA 59.002 34.615 17.56 0.49 32.35 2.52
145 146 7.080724 GTGCTATTGGAACTTCAGAAGAAAAG 58.919 38.462 17.56 5.40 32.35 2.27
146 147 6.293407 CGTGCTATTGGAACTTCAGAAGAAAA 60.293 38.462 17.56 5.75 32.35 2.29
147 148 5.179368 CGTGCTATTGGAACTTCAGAAGAAA 59.821 40.000 17.56 6.08 32.35 2.52
148 149 4.690748 CGTGCTATTGGAACTTCAGAAGAA 59.309 41.667 17.56 0.78 0.00 2.52
149 150 4.021456 TCGTGCTATTGGAACTTCAGAAGA 60.021 41.667 17.56 0.00 0.00 2.87
150 151 4.245660 TCGTGCTATTGGAACTTCAGAAG 58.754 43.478 8.77 8.77 0.00 2.85
151 152 4.245660 CTCGTGCTATTGGAACTTCAGAA 58.754 43.478 0.00 0.00 0.00 3.02
152 153 3.368427 CCTCGTGCTATTGGAACTTCAGA 60.368 47.826 0.00 0.00 0.00 3.27
153 154 2.932614 CCTCGTGCTATTGGAACTTCAG 59.067 50.000 0.00 0.00 0.00 3.02
154 155 2.354704 CCCTCGTGCTATTGGAACTTCA 60.355 50.000 0.00 0.00 0.00 3.02
155 156 2.093658 TCCCTCGTGCTATTGGAACTTC 60.094 50.000 0.00 0.00 0.00 3.01
156 157 1.906574 TCCCTCGTGCTATTGGAACTT 59.093 47.619 0.00 0.00 0.00 2.66
157 158 1.482593 CTCCCTCGTGCTATTGGAACT 59.517 52.381 0.00 0.00 0.00 3.01
158 159 1.480954 TCTCCCTCGTGCTATTGGAAC 59.519 52.381 0.00 0.00 0.00 3.62
159 160 1.757118 CTCTCCCTCGTGCTATTGGAA 59.243 52.381 0.00 0.00 0.00 3.53
160 161 1.063942 TCTCTCCCTCGTGCTATTGGA 60.064 52.381 0.00 0.00 0.00 3.53
161 162 1.403814 TCTCTCCCTCGTGCTATTGG 58.596 55.000 0.00 0.00 0.00 3.16
162 163 3.553922 GGATTCTCTCCCTCGTGCTATTG 60.554 52.174 0.00 0.00 38.19 1.90
163 164 2.630580 GGATTCTCTCCCTCGTGCTATT 59.369 50.000 0.00 0.00 38.19 1.73
164 165 2.243810 GGATTCTCTCCCTCGTGCTAT 58.756 52.381 0.00 0.00 38.19 2.97
165 166 1.693627 GGATTCTCTCCCTCGTGCTA 58.306 55.000 0.00 0.00 38.19 3.49
166 167 2.510664 GGATTCTCTCCCTCGTGCT 58.489 57.895 0.00 0.00 38.19 4.40
174 175 6.464607 GGAGTGGTTTATAAGGGATTCTCTCC 60.465 46.154 0.00 0.00 44.11 3.71
175 176 6.099845 TGGAGTGGTTTATAAGGGATTCTCTC 59.900 42.308 0.00 0.00 0.00 3.20
176 177 5.970640 TGGAGTGGTTTATAAGGGATTCTCT 59.029 40.000 0.00 0.00 0.00 3.10
177 178 6.248569 TGGAGTGGTTTATAAGGGATTCTC 57.751 41.667 0.00 0.00 0.00 2.87
178 179 6.217693 AGTTGGAGTGGTTTATAAGGGATTCT 59.782 38.462 0.00 0.00 0.00 2.40
179 180 6.424032 AGTTGGAGTGGTTTATAAGGGATTC 58.576 40.000 0.00 0.00 0.00 2.52
180 181 6.217693 AGAGTTGGAGTGGTTTATAAGGGATT 59.782 38.462 0.00 0.00 0.00 3.01
181 182 5.731678 AGAGTTGGAGTGGTTTATAAGGGAT 59.268 40.000 0.00 0.00 0.00 3.85
182 183 5.098663 AGAGTTGGAGTGGTTTATAAGGGA 58.901 41.667 0.00 0.00 0.00 4.20
183 184 5.429130 GAGAGTTGGAGTGGTTTATAAGGG 58.571 45.833 0.00 0.00 0.00 3.95
184 185 5.189934 AGGAGAGTTGGAGTGGTTTATAAGG 59.810 44.000 0.00 0.00 0.00 2.69
185 186 6.301169 AGGAGAGTTGGAGTGGTTTATAAG 57.699 41.667 0.00 0.00 0.00 1.73
186 187 6.296259 GGAAGGAGAGTTGGAGTGGTTTATAA 60.296 42.308 0.00 0.00 0.00 0.98
187 188 5.189145 GGAAGGAGAGTTGGAGTGGTTTATA 59.811 44.000 0.00 0.00 0.00 0.98
188 189 4.019231 GGAAGGAGAGTTGGAGTGGTTTAT 60.019 45.833 0.00 0.00 0.00 1.40
189 190 3.326880 GGAAGGAGAGTTGGAGTGGTTTA 59.673 47.826 0.00 0.00 0.00 2.01
190 191 2.106684 GGAAGGAGAGTTGGAGTGGTTT 59.893 50.000 0.00 0.00 0.00 3.27
191 192 1.700186 GGAAGGAGAGTTGGAGTGGTT 59.300 52.381 0.00 0.00 0.00 3.67
192 193 1.353091 GGAAGGAGAGTTGGAGTGGT 58.647 55.000 0.00 0.00 0.00 4.16
193 194 1.002544 GTGGAAGGAGAGTTGGAGTGG 59.997 57.143 0.00 0.00 0.00 4.00
194 195 1.974236 AGTGGAAGGAGAGTTGGAGTG 59.026 52.381 0.00 0.00 0.00 3.51
195 196 2.407340 AGTGGAAGGAGAGTTGGAGT 57.593 50.000 0.00 0.00 0.00 3.85
196 197 2.903135 AGAAGTGGAAGGAGAGTTGGAG 59.097 50.000 0.00 0.00 0.00 3.86
197 198 2.634940 CAGAAGTGGAAGGAGAGTTGGA 59.365 50.000 0.00 0.00 0.00 3.53
198 199 3.051081 CAGAAGTGGAAGGAGAGTTGG 57.949 52.381 0.00 0.00 0.00 3.77
211 212 1.358152 TTAGTCCCACCCCAGAAGTG 58.642 55.000 0.00 0.00 34.91 3.16
212 213 1.703513 GTTTAGTCCCACCCCAGAAGT 59.296 52.381 0.00 0.00 0.00 3.01
213 214 1.985895 AGTTTAGTCCCACCCCAGAAG 59.014 52.381 0.00 0.00 0.00 2.85
214 215 2.127651 AGTTTAGTCCCACCCCAGAA 57.872 50.000 0.00 0.00 0.00 3.02
215 216 2.127651 AAGTTTAGTCCCACCCCAGA 57.872 50.000 0.00 0.00 0.00 3.86
216 217 2.971901 AAAGTTTAGTCCCACCCCAG 57.028 50.000 0.00 0.00 0.00 4.45
217 218 2.514582 TGAAAAGTTTAGTCCCACCCCA 59.485 45.455 0.00 0.00 0.00 4.96
218 219 2.889045 GTGAAAAGTTTAGTCCCACCCC 59.111 50.000 0.00 0.00 0.00 4.95
219 220 2.889045 GGTGAAAAGTTTAGTCCCACCC 59.111 50.000 0.00 0.00 37.27 4.61
220 221 3.317149 GTGGTGAAAAGTTTAGTCCCACC 59.683 47.826 12.32 0.00 41.98 4.61
221 222 3.317149 GGTGGTGAAAAGTTTAGTCCCAC 59.683 47.826 13.95 13.95 40.24 4.61
222 223 3.203487 AGGTGGTGAAAAGTTTAGTCCCA 59.797 43.478 0.00 0.00 0.00 4.37
223 224 3.828921 AGGTGGTGAAAAGTTTAGTCCC 58.171 45.455 0.00 0.00 0.00 4.46
224 225 4.643334 ACAAGGTGGTGAAAAGTTTAGTCC 59.357 41.667 0.00 0.00 0.00 3.85
225 226 5.355910 TGACAAGGTGGTGAAAAGTTTAGTC 59.644 40.000 0.00 0.00 0.00 2.59
226 227 5.258051 TGACAAGGTGGTGAAAAGTTTAGT 58.742 37.500 0.00 0.00 0.00 2.24
227 228 5.828299 TGACAAGGTGGTGAAAAGTTTAG 57.172 39.130 0.00 0.00 0.00 1.85
228 229 5.300792 GGATGACAAGGTGGTGAAAAGTTTA 59.699 40.000 0.00 0.00 0.00 2.01
229 230 4.099419 GGATGACAAGGTGGTGAAAAGTTT 59.901 41.667 0.00 0.00 0.00 2.66
230 231 3.636764 GGATGACAAGGTGGTGAAAAGTT 59.363 43.478 0.00 0.00 0.00 2.66
231 232 3.222603 GGATGACAAGGTGGTGAAAAGT 58.777 45.455 0.00 0.00 0.00 2.66
232 233 2.558359 GGGATGACAAGGTGGTGAAAAG 59.442 50.000 0.00 0.00 0.00 2.27
233 234 2.091610 TGGGATGACAAGGTGGTGAAAA 60.092 45.455 0.00 0.00 0.00 2.29
234 235 1.496857 TGGGATGACAAGGTGGTGAAA 59.503 47.619 0.00 0.00 0.00 2.69
235 236 1.144691 TGGGATGACAAGGTGGTGAA 58.855 50.000 0.00 0.00 0.00 3.18
236 237 0.400213 GTGGGATGACAAGGTGGTGA 59.600 55.000 0.00 0.00 0.00 4.02
237 238 0.609131 GGTGGGATGACAAGGTGGTG 60.609 60.000 0.00 0.00 0.00 4.17
238 239 0.772124 AGGTGGGATGACAAGGTGGT 60.772 55.000 0.00 0.00 0.00 4.16
239 240 1.285280 TAGGTGGGATGACAAGGTGG 58.715 55.000 0.00 0.00 0.00 4.61
240 241 4.505566 CCATATAGGTGGGATGACAAGGTG 60.506 50.000 0.00 0.00 35.55 4.00
241 242 3.652869 CCATATAGGTGGGATGACAAGGT 59.347 47.826 0.00 0.00 35.55 3.50
242 243 4.292186 CCATATAGGTGGGATGACAAGG 57.708 50.000 0.00 0.00 35.55 3.61
252 253 5.011982 TCTCTAAGGACCCATATAGGTGG 57.988 47.826 0.00 0.00 41.42 4.61
253 254 8.666129 TTAATCTCTAAGGACCCATATAGGTG 57.334 38.462 0.00 0.00 41.42 4.00
254 255 9.860393 ATTTAATCTCTAAGGACCCATATAGGT 57.140 33.333 0.00 0.00 45.12 3.08
258 259 9.621239 TCAGATTTAATCTCTAAGGACCCATAT 57.379 33.333 4.24 0.00 37.58 1.78
259 260 9.447279 TTCAGATTTAATCTCTAAGGACCCATA 57.553 33.333 4.24 0.00 37.58 2.74
260 261 7.937700 TCAGATTTAATCTCTAAGGACCCAT 57.062 36.000 4.24 0.00 37.58 4.00
261 262 7.749377 TTCAGATTTAATCTCTAAGGACCCA 57.251 36.000 4.24 0.00 37.58 4.51
262 263 9.634021 AATTTCAGATTTAATCTCTAAGGACCC 57.366 33.333 4.24 0.00 37.58 4.46
273 274 9.415544 GCCCATATGACAATTTCAGATTTAATC 57.584 33.333 3.65 0.00 33.67 1.75
274 275 9.151177 AGCCCATATGACAATTTCAGATTTAAT 57.849 29.630 3.65 0.00 33.67 1.40
275 276 8.537728 AGCCCATATGACAATTTCAGATTTAA 57.462 30.769 3.65 0.00 33.67 1.52
276 277 8.000709 AGAGCCCATATGACAATTTCAGATTTA 58.999 33.333 3.65 0.00 33.67 1.40
277 278 6.837568 AGAGCCCATATGACAATTTCAGATTT 59.162 34.615 3.65 0.00 33.67 2.17
278 279 6.371278 AGAGCCCATATGACAATTTCAGATT 58.629 36.000 3.65 0.00 33.67 2.40
279 280 5.950023 AGAGCCCATATGACAATTTCAGAT 58.050 37.500 3.65 0.00 36.55 2.90
280 281 5.378230 AGAGCCCATATGACAATTTCAGA 57.622 39.130 3.65 0.00 37.77 3.27
281 282 5.704515 CCTAGAGCCCATATGACAATTTCAG 59.295 44.000 3.65 0.00 37.77 3.02
282 283 5.624159 CCTAGAGCCCATATGACAATTTCA 58.376 41.667 3.65 0.00 39.11 2.69
283 284 4.457257 GCCTAGAGCCCATATGACAATTTC 59.543 45.833 3.65 0.00 34.35 2.17
284 285 4.401925 GCCTAGAGCCCATATGACAATTT 58.598 43.478 3.65 0.00 34.35 1.82
285 286 4.026356 GCCTAGAGCCCATATGACAATT 57.974 45.455 3.65 0.00 34.35 2.32
286 287 3.710209 GCCTAGAGCCCATATGACAAT 57.290 47.619 3.65 0.00 34.35 2.71
298 299 4.019860 TGAAATATGAGATGGGCCTAGAGC 60.020 45.833 4.53 0.00 42.60 4.09
299 300 5.752036 TGAAATATGAGATGGGCCTAGAG 57.248 43.478 4.53 0.00 0.00 2.43
300 301 5.369404 TGTTGAAATATGAGATGGGCCTAGA 59.631 40.000 4.53 0.00 0.00 2.43
301 302 5.624159 TGTTGAAATATGAGATGGGCCTAG 58.376 41.667 4.53 0.00 0.00 3.02
302 303 5.645056 TGTTGAAATATGAGATGGGCCTA 57.355 39.130 4.53 0.00 0.00 3.93
303 304 4.524802 TGTTGAAATATGAGATGGGCCT 57.475 40.909 4.53 0.00 0.00 5.19
304 305 5.796424 ATTGTTGAAATATGAGATGGGCC 57.204 39.130 0.00 0.00 0.00 5.80
305 306 6.703165 GGAAATTGTTGAAATATGAGATGGGC 59.297 38.462 0.00 0.00 0.00 5.36
306 307 7.212274 GGGAAATTGTTGAAATATGAGATGGG 58.788 38.462 0.00 0.00 0.00 4.00
307 308 7.070322 AGGGGAAATTGTTGAAATATGAGATGG 59.930 37.037 0.00 0.00 0.00 3.51
308 309 8.015185 AGGGGAAATTGTTGAAATATGAGATG 57.985 34.615 0.00 0.00 0.00 2.90
309 310 8.613922 AAGGGGAAATTGTTGAAATATGAGAT 57.386 30.769 0.00 0.00 0.00 2.75
310 311 7.124147 GGAAGGGGAAATTGTTGAAATATGAGA 59.876 37.037 0.00 0.00 0.00 3.27
311 312 7.267857 GGAAGGGGAAATTGTTGAAATATGAG 58.732 38.462 0.00 0.00 0.00 2.90
312 313 6.156083 GGGAAGGGGAAATTGTTGAAATATGA 59.844 38.462 0.00 0.00 0.00 2.15
313 314 6.348498 GGGAAGGGGAAATTGTTGAAATATG 58.652 40.000 0.00 0.00 0.00 1.78
314 315 5.428457 GGGGAAGGGGAAATTGTTGAAATAT 59.572 40.000 0.00 0.00 0.00 1.28
315 316 4.780554 GGGGAAGGGGAAATTGTTGAAATA 59.219 41.667 0.00 0.00 0.00 1.40
316 317 3.587061 GGGGAAGGGGAAATTGTTGAAAT 59.413 43.478 0.00 0.00 0.00 2.17
317 318 2.976185 GGGGAAGGGGAAATTGTTGAAA 59.024 45.455 0.00 0.00 0.00 2.69
318 319 2.090494 TGGGGAAGGGGAAATTGTTGAA 60.090 45.455 0.00 0.00 0.00 2.69
319 320 1.505538 TGGGGAAGGGGAAATTGTTGA 59.494 47.619 0.00 0.00 0.00 3.18
320 321 2.022718 TGGGGAAGGGGAAATTGTTG 57.977 50.000 0.00 0.00 0.00 3.33
321 322 2.805290 TTGGGGAAGGGGAAATTGTT 57.195 45.000 0.00 0.00 0.00 2.83
322 323 2.181196 TCTTTGGGGAAGGGGAAATTGT 59.819 45.455 0.00 0.00 35.98 2.71
323 324 2.901291 TCTTTGGGGAAGGGGAAATTG 58.099 47.619 0.00 0.00 35.98 2.32
324 325 3.568780 GGATCTTTGGGGAAGGGGAAATT 60.569 47.826 0.00 0.00 35.98 1.82
325 326 2.023015 GGATCTTTGGGGAAGGGGAAAT 60.023 50.000 0.00 0.00 35.98 2.17
326 327 1.361197 GGATCTTTGGGGAAGGGGAAA 59.639 52.381 0.00 0.00 35.98 3.13
327 328 1.007607 GGATCTTTGGGGAAGGGGAA 58.992 55.000 0.00 0.00 35.98 3.97
328 329 0.123266 AGGATCTTTGGGGAAGGGGA 59.877 55.000 0.00 0.00 35.98 4.81
329 330 0.553333 GAGGATCTTTGGGGAAGGGG 59.447 60.000 0.00 0.00 35.98 4.79
330 331 0.553333 GGAGGATCTTTGGGGAAGGG 59.447 60.000 0.00 0.00 35.98 3.95
331 332 0.553333 GGGAGGATCTTTGGGGAAGG 59.447 60.000 0.00 0.00 35.98 3.46
332 333 0.553333 GGGGAGGATCTTTGGGGAAG 59.447 60.000 0.00 0.00 36.67 3.46
333 334 1.279025 CGGGGAGGATCTTTGGGGAA 61.279 60.000 0.00 0.00 33.73 3.97
334 335 1.692749 CGGGGAGGATCTTTGGGGA 60.693 63.158 0.00 0.00 33.73 4.81
335 336 2.757124 CCGGGGAGGATCTTTGGGG 61.757 68.421 0.00 0.00 45.00 4.96
336 337 2.919043 CCGGGGAGGATCTTTGGG 59.081 66.667 0.00 0.00 45.00 4.12
337 338 2.193248 GCCGGGGAGGATCTTTGG 59.807 66.667 2.18 0.00 45.00 3.28
338 339 2.193248 GGCCGGGGAGGATCTTTG 59.807 66.667 2.18 0.00 45.00 2.77
339 340 3.480133 CGGCCGGGGAGGATCTTT 61.480 66.667 20.10 0.00 45.00 2.52
402 407 0.324943 GACCTTCCCTAGCTTGCACA 59.675 55.000 0.00 0.00 0.00 4.57
434 440 1.153329 AAACTTGGCCGTGACGTGA 60.153 52.632 3.64 0.00 0.00 4.35
447 453 3.605664 GCAGGTGGCCGCAAACTT 61.606 61.111 19.98 0.00 36.11 2.66
459 477 2.031163 GCACAAGGACGAGCAGGT 59.969 61.111 0.00 0.00 0.00 4.00
471 489 2.280524 CGGTTGAGGACGGCACAA 60.281 61.111 0.00 0.00 0.00 3.33
501 523 0.930310 CGCGTTGATGTAGGACATGG 59.070 55.000 0.00 0.00 39.27 3.66
581 603 3.536917 CTGGTGGCGATAGGGCGA 61.537 66.667 0.00 0.00 46.04 5.54
589 611 1.670949 GCTCTCTCATCTGGTGGCGA 61.671 60.000 0.00 0.00 0.00 5.54
600 622 1.625818 GTTTCCCCTTCTGCTCTCTCA 59.374 52.381 0.00 0.00 0.00 3.27
622 644 2.755655 ACGACGATGATCTTGGAGACTT 59.244 45.455 0.00 0.00 0.00 3.01
669 698 0.681564 TCCTTCTCGCTCCTGGACTC 60.682 60.000 0.00 0.00 0.00 3.36
688 717 1.671901 CCCAACCCAAACACAACGCT 61.672 55.000 0.00 0.00 0.00 5.07
798 887 1.507141 GGCCCGATAAATCCACGCAG 61.507 60.000 0.00 0.00 0.00 5.18
843 932 4.329392 TCCTGCTATATCAACCATGCATG 58.671 43.478 20.19 20.19 0.00 4.06
844 933 4.645863 TCCTGCTATATCAACCATGCAT 57.354 40.909 0.00 0.00 0.00 3.96
845 934 4.436113 TTCCTGCTATATCAACCATGCA 57.564 40.909 0.00 0.00 0.00 3.96
846 935 5.005740 TGATTCCTGCTATATCAACCATGC 58.994 41.667 0.00 0.00 0.00 4.06
1061 1151 1.671901 GCGTGAGGAGGAGAAGGAGG 61.672 65.000 0.00 0.00 0.00 4.30
1063 1153 1.682684 GGCGTGAGGAGGAGAAGGA 60.683 63.158 0.00 0.00 0.00 3.36
1064 1154 2.726351 GGGCGTGAGGAGGAGAAGG 61.726 68.421 0.00 0.00 0.00 3.46
1065 1155 1.261238 AAGGGCGTGAGGAGGAGAAG 61.261 60.000 0.00 0.00 0.00 2.85
1066 1156 0.040646 TAAGGGCGTGAGGAGGAGAA 59.959 55.000 0.00 0.00 0.00 2.87
1067 1157 0.040646 TTAAGGGCGTGAGGAGGAGA 59.959 55.000 0.00 0.00 0.00 3.71
1068 1158 0.175989 GTTAAGGGCGTGAGGAGGAG 59.824 60.000 0.00 0.00 0.00 3.69
1069 1159 1.262640 GGTTAAGGGCGTGAGGAGGA 61.263 60.000 0.00 0.00 0.00 3.71
1070 1160 1.221021 GGTTAAGGGCGTGAGGAGG 59.779 63.158 0.00 0.00 0.00 4.30
1071 1161 0.391263 GTGGTTAAGGGCGTGAGGAG 60.391 60.000 0.00 0.00 0.00 3.69
1072 1162 1.675219 GTGGTTAAGGGCGTGAGGA 59.325 57.895 0.00 0.00 0.00 3.71
1073 1163 1.376812 GGTGGTTAAGGGCGTGAGG 60.377 63.158 0.00 0.00 0.00 3.86
1074 1164 1.376812 GGGTGGTTAAGGGCGTGAG 60.377 63.158 0.00 0.00 0.00 3.51
1075 1165 2.751688 GGGTGGTTAAGGGCGTGA 59.248 61.111 0.00 0.00 0.00 4.35
1076 1166 2.360726 GGGGTGGTTAAGGGCGTG 60.361 66.667 0.00 0.00 0.00 5.34
1077 1167 4.024545 CGGGGTGGTTAAGGGCGT 62.025 66.667 0.00 0.00 0.00 5.68
1078 1168 4.789123 CCGGGGTGGTTAAGGGCG 62.789 72.222 0.00 0.00 0.00 6.13
1080 1170 4.435970 GGCCGGGGTGGTTAAGGG 62.436 72.222 2.18 0.00 41.21 3.95
1081 1171 2.831894 GAAGGCCGGGGTGGTTAAGG 62.832 65.000 2.18 0.00 41.21 2.69
1082 1172 1.378119 GAAGGCCGGGGTGGTTAAG 60.378 63.158 2.18 0.00 41.21 1.85
1083 1173 2.758434 GAAGGCCGGGGTGGTTAA 59.242 61.111 2.18 0.00 41.21 2.01
1084 1174 3.332385 GGAAGGCCGGGGTGGTTA 61.332 66.667 2.18 0.00 41.21 2.85
1087 1177 4.426313 GAAGGAAGGCCGGGGTGG 62.426 72.222 2.18 0.00 39.96 4.61
1088 1178 4.426313 GGAAGGAAGGCCGGGGTG 62.426 72.222 2.18 0.00 39.96 4.61
1091 1181 4.115199 CAGGGAAGGAAGGCCGGG 62.115 72.222 2.18 0.00 39.96 5.73
1092 1182 4.115199 CCAGGGAAGGAAGGCCGG 62.115 72.222 0.00 0.00 39.96 6.13
1093 1183 3.009115 TCCAGGGAAGGAAGGCCG 61.009 66.667 0.00 0.00 39.96 6.13
1094 1184 1.916206 GACTCCAGGGAAGGAAGGCC 61.916 65.000 0.00 0.00 37.20 5.19
1095 1185 1.604915 GACTCCAGGGAAGGAAGGC 59.395 63.158 0.00 0.00 37.20 4.35
1096 1186 0.614979 TCGACTCCAGGGAAGGAAGG 60.615 60.000 0.00 0.00 37.20 3.46
1097 1187 1.410882 GATCGACTCCAGGGAAGGAAG 59.589 57.143 0.00 0.00 37.20 3.46
1098 1188 1.486211 GATCGACTCCAGGGAAGGAA 58.514 55.000 0.00 0.00 37.20 3.36
1099 1189 0.752009 CGATCGACTCCAGGGAAGGA 60.752 60.000 10.26 0.00 36.00 3.36
1110 1200 1.878522 GATTGCGCACCGATCGACT 60.879 57.895 18.66 0.00 0.00 4.18
1114 1204 0.940126 AGATTGATTGCGCACCGATC 59.060 50.000 22.46 22.46 35.28 3.69
1115 1205 0.940126 GAGATTGATTGCGCACCGAT 59.060 50.000 11.12 10.75 0.00 4.18
1737 1868 2.525124 TTCGCTGGAGGAAAGCCCA 61.525 57.895 0.00 0.00 37.37 5.36
1916 2047 2.515853 TCTCTATCTCCAGGCTCTCCAA 59.484 50.000 0.00 0.00 33.74 3.53
2038 2169 1.810532 CTGGCTCTCGGTCAGGTAC 59.189 63.158 0.00 0.00 43.40 3.34
2160 2291 5.861222 AATGAATAATGATCATGCGCGTA 57.139 34.783 9.46 2.40 37.58 4.42
2161 2292 4.754372 AATGAATAATGATCATGCGCGT 57.246 36.364 9.46 0.00 37.58 6.01
2162 2293 6.253013 ACATAATGAATAATGATCATGCGCG 58.747 36.000 9.46 0.00 37.58 6.86
2163 2294 7.539710 ACAACATAATGAATAATGATCATGCGC 59.460 33.333 9.46 0.00 37.58 6.09
2387 2522 4.671880 ATCGATCGATAGGAGAACGAAG 57.328 45.455 28.45 0.00 43.85 3.79
2391 2526 5.493133 AGCATATCGATCGATAGGAGAAC 57.507 43.478 39.24 26.34 40.17 3.01
2417 2568 7.707774 ACAAACTTAACGCATAAGCATTTTT 57.292 28.000 8.14 0.77 44.11 1.94
2418 2569 7.707774 AACAAACTTAACGCATAAGCATTTT 57.292 28.000 8.14 1.05 44.11 1.82
2419 2570 7.223777 ACAAACAAACTTAACGCATAAGCATTT 59.776 29.630 8.14 1.60 44.11 2.32
2439 2590 1.135831 CGCCGCACATATCAACAAACA 60.136 47.619 0.00 0.00 0.00 2.83
2440 2591 1.534028 CGCCGCACATATCAACAAAC 58.466 50.000 0.00 0.00 0.00 2.93
2442 2593 1.372838 CCCGCCGCACATATCAACAA 61.373 55.000 0.00 0.00 0.00 2.83
2443 2594 1.817520 CCCGCCGCACATATCAACA 60.818 57.895 0.00 0.00 0.00 3.33
2444 2595 3.022287 CCCGCCGCACATATCAAC 58.978 61.111 0.00 0.00 0.00 3.18
2445 2596 2.899838 GCCCGCCGCACATATCAA 60.900 61.111 0.00 0.00 37.47 2.57
2446 2597 4.168291 TGCCCGCCGCACATATCA 62.168 61.111 0.00 0.00 44.64 2.15
2447 2598 3.349006 CTGCCCGCCGCACATATC 61.349 66.667 0.00 0.00 44.64 1.63
2448 2599 4.935495 CCTGCCCGCCGCACATAT 62.935 66.667 0.00 0.00 44.64 1.78
2600 2751 1.192146 TGTAGGCTTTGGCGAGGACT 61.192 55.000 0.00 0.00 39.81 3.85
2630 2781 9.056005 GTATGTTACCTCTCATTGATGCATTTA 57.944 33.333 0.00 0.00 0.00 1.40
2656 2807 7.453126 AGGATGAAGAGTATGTAGGATTGTAGG 59.547 40.741 0.00 0.00 0.00 3.18
2657 2808 8.303156 CAGGATGAAGAGTATGTAGGATTGTAG 58.697 40.741 0.00 0.00 39.69 2.74
2658 2809 7.785028 ACAGGATGAAGAGTATGTAGGATTGTA 59.215 37.037 0.00 0.00 39.69 2.41
2659 2810 6.613271 ACAGGATGAAGAGTATGTAGGATTGT 59.387 38.462 0.00 0.00 39.69 2.71
2660 2811 7.015098 AGACAGGATGAAGAGTATGTAGGATTG 59.985 40.741 0.00 0.00 39.69 2.67
2661 2812 7.072562 AGACAGGATGAAGAGTATGTAGGATT 58.927 38.462 0.00 0.00 39.69 3.01
2662 2813 6.619464 AGACAGGATGAAGAGTATGTAGGAT 58.381 40.000 0.00 0.00 39.69 3.24
2663 2814 6.019656 AGACAGGATGAAGAGTATGTAGGA 57.980 41.667 0.00 0.00 39.69 2.94
2664 2815 7.888021 AGATAGACAGGATGAAGAGTATGTAGG 59.112 40.741 0.00 0.00 39.69 3.18
2665 2816 8.862325 AGATAGACAGGATGAAGAGTATGTAG 57.138 38.462 0.00 0.00 39.69 2.74
2733 2944 9.962809 AGAGATGAGTTACTAAGTTGTAGTACT 57.037 33.333 0.00 0.00 30.54 2.73
2734 2945 9.991388 CAGAGATGAGTTACTAAGTTGTAGTAC 57.009 37.037 0.00 0.00 30.54 2.73
2735 2946 9.736414 ACAGAGATGAGTTACTAAGTTGTAGTA 57.264 33.333 0.00 0.00 0.00 1.82
2736 2947 8.516234 CACAGAGATGAGTTACTAAGTTGTAGT 58.484 37.037 0.00 0.00 0.00 2.73
2737 2948 7.486551 GCACAGAGATGAGTTACTAAGTTGTAG 59.513 40.741 0.00 0.00 0.00 2.74
2751 2962 0.738762 CCACACCGCACAGAGATGAG 60.739 60.000 0.00 0.00 0.00 2.90
2756 2967 1.665916 CTGTCCACACCGCACAGAG 60.666 63.158 0.00 0.00 40.07 3.35
2757 2968 2.421314 CTGTCCACACCGCACAGA 59.579 61.111 0.00 0.00 40.07 3.41
2758 2969 2.666190 CCTGTCCACACCGCACAG 60.666 66.667 0.00 0.00 37.81 3.66
2855 3066 7.979444 ACTGCATTGTTGTTTGTAGTACTAT 57.021 32.000 5.75 0.00 37.09 2.12
2858 3069 7.749539 AAAACTGCATTGTTGTTTGTAGTAC 57.250 32.000 2.19 0.00 37.74 2.73
2882 3093 0.036448 TTTTGATCCGGCCGGTGTTA 59.964 50.000 41.57 25.10 36.47 2.41
3006 3220 1.137825 GTGCCTCCTCTCGAGTTCG 59.862 63.158 13.13 2.34 36.82 3.95
3009 3223 1.680651 CAGGTGCCTCCTCTCGAGT 60.681 63.158 13.13 0.00 46.24 4.18
3164 3394 9.520204 GATCAGAAAGATAAGAAACAGAGAGAG 57.480 37.037 0.00 0.00 37.00 3.20
3264 3497 1.751351 CTCTGGCTGGTTGAGACGATA 59.249 52.381 0.00 0.00 28.23 2.92
3337 3570 9.218440 ACTTGAGAAACTAGTGAGTAGTAGTAC 57.782 37.037 0.00 0.00 41.50 2.73
3366 3599 9.093970 TGCAAATAAGTATACTCACATGTACAC 57.906 33.333 5.70 0.00 0.00 2.90
3371 3604 7.592533 GGCAATGCAAATAAGTATACTCACATG 59.407 37.037 7.79 5.25 0.00 3.21
3374 3607 7.026631 TGGCAATGCAAATAAGTATACTCAC 57.973 36.000 7.79 0.00 0.00 3.51
3377 3610 8.576442 GGTAATGGCAATGCAAATAAGTATACT 58.424 33.333 7.79 0.00 0.00 2.12
3378 3611 7.812669 GGGTAATGGCAATGCAAATAAGTATAC 59.187 37.037 7.79 0.00 0.00 1.47
3379 3612 7.728083 AGGGTAATGGCAATGCAAATAAGTATA 59.272 33.333 7.79 0.00 0.00 1.47
3380 3613 6.554605 AGGGTAATGGCAATGCAAATAAGTAT 59.445 34.615 7.79 0.00 0.00 2.12
3381 3614 5.896678 AGGGTAATGGCAATGCAAATAAGTA 59.103 36.000 7.79 0.00 0.00 2.24
3383 3616 5.051816 CAGGGTAATGGCAATGCAAATAAG 58.948 41.667 7.79 0.00 0.00 1.73
3384 3617 4.141756 CCAGGGTAATGGCAATGCAAATAA 60.142 41.667 7.79 0.00 32.48 1.40
3387 3620 1.554160 CCAGGGTAATGGCAATGCAAA 59.446 47.619 7.79 0.00 32.48 3.68
3405 3638 2.695359 GAACTGGCTCGATAAACACCA 58.305 47.619 0.00 0.00 0.00 4.17
3407 3640 2.334838 ACGAACTGGCTCGATAAACAC 58.665 47.619 8.18 0.00 41.44 3.32
3408 3641 2.602878 GACGAACTGGCTCGATAAACA 58.397 47.619 8.18 0.00 41.44 2.83
3409 3642 1.925185 GGACGAACTGGCTCGATAAAC 59.075 52.381 8.18 0.00 41.44 2.01
3410 3643 1.822990 AGGACGAACTGGCTCGATAAA 59.177 47.619 8.18 0.00 41.44 1.40
3448 3687 6.578020 TCTGGTTACTGCGATAATAAAACG 57.422 37.500 0.00 0.00 0.00 3.60
3454 3693 4.848562 TCGATCTGGTTACTGCGATAAT 57.151 40.909 0.00 0.00 0.00 1.28
3455 3694 4.097437 AGTTCGATCTGGTTACTGCGATAA 59.903 41.667 0.00 0.00 0.00 1.75
3456 3695 3.630769 AGTTCGATCTGGTTACTGCGATA 59.369 43.478 0.00 0.00 0.00 2.92
3464 3703 2.385803 GGGAGGAGTTCGATCTGGTTA 58.614 52.381 0.00 0.00 0.00 2.85
3523 3762 2.353357 TTGCCTGCCTCTTCATATGG 57.647 50.000 2.13 0.00 0.00 2.74
3532 3771 3.181476 TGTTTCTTTTCTTTGCCTGCCTC 60.181 43.478 0.00 0.00 0.00 4.70
3545 3784 5.293569 CAGAGTGGTAGTTCGTGTTTCTTTT 59.706 40.000 0.00 0.00 0.00 2.27
3573 3812 5.014755 ACCTGAACATAGATACCAACCCAAA 59.985 40.000 0.00 0.00 0.00 3.28
3687 3926 1.070758 TCCTGTGTCTCCTTTGCACTC 59.929 52.381 0.00 0.00 34.52 3.51
3689 3928 1.230324 GTCCTGTGTCTCCTTTGCAC 58.770 55.000 0.00 0.00 0.00 4.57
3694 3933 1.794714 ACTGTGTCCTGTGTCTCCTT 58.205 50.000 0.00 0.00 0.00 3.36
3735 3974 0.104304 ACTCTTTCGCGTGTCACCTT 59.896 50.000 5.77 0.00 0.00 3.50
3746 3985 8.472683 AAGTATGAAAAGATCTCACTCTTTCG 57.527 34.615 10.68 0.00 43.05 3.46
3803 4043 7.044181 CACATTTGTATCTGTGTCTATCCTGT 58.956 38.462 0.00 0.00 38.33 4.00
3962 4202 4.466370 AGAAGTAACACCACATGCTAGCTA 59.534 41.667 17.23 2.58 0.00 3.32
3963 4203 3.261897 AGAAGTAACACCACATGCTAGCT 59.738 43.478 17.23 0.00 0.00 3.32
3964 4204 3.372206 CAGAAGTAACACCACATGCTAGC 59.628 47.826 8.10 8.10 0.00 3.42
3965 4205 4.569943 ACAGAAGTAACACCACATGCTAG 58.430 43.478 0.00 0.00 0.00 3.42
4127 4367 3.012518 AGCTGTAGATGGTTGTGCATTC 58.987 45.455 0.00 0.00 0.00 2.67
4128 4368 2.751259 CAGCTGTAGATGGTTGTGCATT 59.249 45.455 5.25 0.00 0.00 3.56
4129 4369 2.290514 ACAGCTGTAGATGGTTGTGCAT 60.291 45.455 20.16 0.00 35.42 3.96
4130 4370 1.072173 ACAGCTGTAGATGGTTGTGCA 59.928 47.619 20.16 0.00 35.42 4.57
4131 4371 1.813513 ACAGCTGTAGATGGTTGTGC 58.186 50.000 20.16 0.00 35.42 4.57
4132 4372 3.402110 TGAACAGCTGTAGATGGTTGTG 58.598 45.455 22.01 0.00 35.42 3.33
4133 4373 3.071602 ACTGAACAGCTGTAGATGGTTGT 59.928 43.478 22.01 0.00 35.42 3.32
4134 4374 3.668447 ACTGAACAGCTGTAGATGGTTG 58.332 45.455 22.01 7.29 35.42 3.77
4136 4376 4.711846 TGATACTGAACAGCTGTAGATGGT 59.288 41.667 22.01 16.11 35.42 3.55
4137 4377 5.046529 GTGATACTGAACAGCTGTAGATGG 58.953 45.833 22.01 11.21 35.42 3.51
4138 4378 5.654497 TGTGATACTGAACAGCTGTAGATG 58.346 41.667 22.01 13.02 34.90 2.90
4141 4381 6.591448 TCATTTGTGATACTGAACAGCTGTAG 59.409 38.462 22.01 17.37 34.90 2.74
4143 4383 5.180117 GTCATTTGTGATACTGAACAGCTGT 59.820 40.000 15.25 15.25 0.00 4.40
4146 4386 5.611796 TGTCATTTGTGATACTGAACAGC 57.388 39.130 1.46 0.00 0.00 4.40
4194 4445 3.565764 TGCACATTTCTAGCTGCCTAT 57.434 42.857 0.00 0.00 0.00 2.57
4267 5522 4.260132 CGAGATGATTGAAGCGAAAGGAAG 60.260 45.833 0.00 0.00 0.00 3.46
4268 5523 3.618594 CGAGATGATTGAAGCGAAAGGAA 59.381 43.478 0.00 0.00 0.00 3.36
4306 5561 3.200483 ACTCGGTTGGTTTGTTCAGTAC 58.800 45.455 0.00 0.00 0.00 2.73
4363 5704 2.551270 ACCTAGTTGGAGAATGCCTGA 58.449 47.619 0.00 0.00 39.71 3.86
4364 5705 3.356529 AACCTAGTTGGAGAATGCCTG 57.643 47.619 0.00 0.00 39.71 4.85
4365 5706 4.104831 AGTAACCTAGTTGGAGAATGCCT 58.895 43.478 0.00 0.00 39.71 4.75
4541 6141 2.226674 GCAAGGACTAACTTGGTTGCTC 59.773 50.000 7.90 0.00 46.10 4.26
4622 6223 0.888619 TGCGGTGGTGTTTTGAACAA 59.111 45.000 0.00 0.00 44.16 2.83
4629 6230 1.816224 GATGGTTATGCGGTGGTGTTT 59.184 47.619 0.00 0.00 0.00 2.83
4707 6308 0.762082 TTTTCCTGCATGGGTTGGCA 60.762 50.000 0.00 0.00 38.52 4.92
4721 6322 3.540617 AGTTGGCAATGTTTGGTTTTCC 58.459 40.909 1.92 0.00 41.14 3.13
4801 6402 4.483476 ACAGGTGCTCGTTCAAAAATAC 57.517 40.909 0.00 0.00 0.00 1.89


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.