Multiple sequence alignment - TraesCS5D01G182500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G182500 chr5D 100.000 6050 0 0 1 6050 283357464 283351415 0.000000e+00 11173.0
1 TraesCS5D01G182500 chr5D 94.286 70 4 0 5248 5317 48933729 48933798 2.310000e-19 108.0
2 TraesCS5D01G182500 chr5D 98.077 52 1 0 5510 5561 283351905 283351854 2.320000e-14 91.6
3 TraesCS5D01G182500 chr5D 98.077 52 1 0 5560 5611 283351955 283351904 2.320000e-14 91.6
4 TraesCS5D01G182500 chr5B 89.081 3013 188 61 474 3389 321560426 321557458 0.000000e+00 3611.0
5 TraesCS5D01G182500 chr5B 91.634 1805 82 30 3392 5189 321557199 321555457 0.000000e+00 2433.0
6 TraesCS5D01G182500 chr5B 83.604 738 50 31 5324 6048 321555457 321554778 1.430000e-175 627.0
7 TraesCS5D01G182500 chr5B 87.500 480 54 6 1 476 140822160 140822637 3.190000e-152 549.0
8 TraesCS5D01G182500 chr5B 83.969 131 13 3 5187 5317 680823753 680823631 1.070000e-22 119.0
9 TraesCS5D01G182500 chr5B 88.889 81 9 0 5244 5324 436618387 436618467 3.860000e-17 100.0
10 TraesCS5D01G182500 chr5A 88.573 1619 113 25 2032 3589 375572435 375570828 0.000000e+00 1899.0
11 TraesCS5D01G182500 chr5A 92.331 1330 56 16 473 1776 375574054 375572745 0.000000e+00 1849.0
12 TraesCS5D01G182500 chr5A 93.521 818 36 11 4377 5187 375569607 375568800 0.000000e+00 1201.0
13 TraesCS5D01G182500 chr5A 94.000 750 39 6 3587 4335 375570348 375569604 0.000000e+00 1131.0
14 TraesCS5D01G182500 chr5A 88.353 498 48 6 5560 6048 375568626 375568130 1.880000e-164 590.0
15 TraesCS5D01G182500 chr5A 88.704 301 28 5 5590 5890 40616308 40616014 4.460000e-96 363.0
16 TraesCS5D01G182500 chr5A 86.207 319 24 9 1806 2119 375572742 375572439 1.630000e-85 327.0
17 TraesCS5D01G182500 chr5A 91.983 237 5 7 5324 5560 375568798 375568576 2.720000e-83 320.0
18 TraesCS5D01G182500 chr2A 88.820 483 46 6 1 476 585984311 585984792 2.430000e-163 586.0
19 TraesCS5D01G182500 chr2A 89.109 303 22 7 5589 5890 122147218 122146926 3.450000e-97 366.0
20 TraesCS5D01G182500 chr2A 87.898 314 32 4 5578 5890 561299053 561298745 1.240000e-96 364.0
21 TraesCS5D01G182500 chr2A 94.286 70 4 0 5248 5317 337719117 337719186 2.310000e-19 108.0
22 TraesCS5D01G182500 chr2D 88.518 479 45 6 1 473 109741706 109741232 6.800000e-159 571.0
23 TraesCS5D01G182500 chr2D 87.942 481 49 7 1 474 329144690 329144212 5.300000e-155 558.0
24 TraesCS5D01G182500 chr2D 87.500 480 53 4 1 474 557169993 557169515 1.150000e-151 547.0
25 TraesCS5D01G182500 chr3D 89.224 464 39 9 1 456 416480454 416480914 2.450000e-158 569.0
26 TraesCS5D01G182500 chr3D 87.552 482 49 8 1 474 471961978 471961500 1.150000e-151 547.0
27 TraesCS5D01G182500 chr3D 91.003 289 23 1 5589 5877 255424391 255424676 2.640000e-103 387.0
28 TraesCS5D01G182500 chr3D 84.536 97 10 5 1416 1509 91225790 91225696 2.320000e-14 91.6
29 TraesCS5D01G182500 chr2B 87.810 484 50 8 1 476 651601165 651601647 5.300000e-155 558.0
30 TraesCS5D01G182500 chr2B 87.542 297 28 7 3390 3680 546972126 546972419 9.720000e-88 335.0
31 TraesCS5D01G182500 chr3B 87.734 481 48 8 1 474 191139395 191138919 8.860000e-153 551.0
32 TraesCS5D01G182500 chr3B 91.003 289 22 2 5589 5877 377115119 377115403 2.640000e-103 387.0
33 TraesCS5D01G182500 chr3B 90.175 285 25 1 5595 5879 39465143 39464862 9.580000e-98 368.0
34 TraesCS5D01G182500 chr3B 85.227 88 10 3 1436 1521 140857514 140857428 3.000000e-13 87.9
35 TraesCS5D01G182500 chr6D 91.349 289 22 1 5589 5877 327021868 327022153 5.680000e-105 392.0
36 TraesCS5D01G182500 chr3A 90.690 290 23 2 5589 5877 319962311 319962597 3.420000e-102 383.0
37 TraesCS5D01G182500 chr3A 95.714 70 3 0 5248 5317 523376 523445 4.960000e-21 113.0
38 TraesCS5D01G182500 chr3A 88.000 75 7 2 1436 1509 107404829 107404756 3.000000e-13 87.9
39 TraesCS5D01G182500 chr7B 87.542 297 28 7 3390 3680 246957632 246957339 9.720000e-88 335.0
40 TraesCS5D01G182500 chr7B 86.869 297 30 7 3390 3680 490076320 490076027 2.100000e-84 324.0
41 TraesCS5D01G182500 chr7B 86.532 297 31 7 3390 3680 399238191 399238484 9.790000e-83 318.0
42 TraesCS5D01G182500 chr4B 87.542 297 28 7 3390 3680 491007112 491006819 9.720000e-88 335.0
43 TraesCS5D01G182500 chr4B 85.859 297 33 7 3390 3680 404623180 404622887 2.120000e-79 307.0
44 TraesCS5D01G182500 chr1B 87.542 297 28 7 3390 3680 148509944 148510237 9.720000e-88 335.0
45 TraesCS5D01G182500 chr1B 87.542 297 28 7 3390 3680 377099054 377099347 9.720000e-88 335.0
46 TraesCS5D01G182500 chr1B 86.395 294 31 7 3393 3680 358387320 358387030 4.550000e-81 313.0
47 TraesCS5D01G182500 chr1B 86.195 297 32 7 3390 3680 359605555 359605848 4.550000e-81 313.0
48 TraesCS5D01G182500 chr1B 87.342 79 8 2 1435 1512 172001804 172001881 8.350000e-14 89.8
49 TraesCS5D01G182500 chr6B 87.413 286 28 7 3402 3680 436204750 436204466 7.560000e-84 322.0
50 TraesCS5D01G182500 chr6B 86.195 297 32 7 3390 3680 596917103 596917396 4.550000e-81 313.0
51 TraesCS5D01G182500 chr6B 85.374 294 34 7 3393 3680 252382236 252381946 4.580000e-76 296.0
52 TraesCS5D01G182500 chr6B 95.714 70 3 0 5248 5317 335346111 335346042 4.960000e-21 113.0
53 TraesCS5D01G182500 chr4A 84.848 297 36 7 3390 3680 311727021 311727314 2.130000e-74 291.0
54 TraesCS5D01G182500 chr4D 97.183 71 2 0 5246 5316 484679168 484679238 2.960000e-23 121.0
55 TraesCS5D01G182500 chr4D 98.214 56 1 0 5187 5242 484679154 484679209 1.390000e-16 99.0
56 TraesCS5D01G182500 chr1A 92.000 75 6 0 5248 5322 52458309 52458235 8.290000e-19 106.0
57 TraesCS5D01G182500 chr1A 87.342 79 8 2 1435 1512 119704082 119704159 8.350000e-14 89.8
58 TraesCS5D01G182500 chr1D 89.412 85 5 3 5246 5330 404263545 404263465 2.980000e-18 104.0
59 TraesCS5D01G182500 chr1D 87.342 79 8 2 1435 1512 112462216 112462293 8.350000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G182500 chr5D 283351415 283357464 6049 True 11173.000000 11173 100.000000 1 6050 1 chr5D.!!$R1 6049
1 TraesCS5D01G182500 chr5B 321554778 321560426 5648 True 2223.666667 3611 88.106333 474 6048 3 chr5B.!!$R2 5574
2 TraesCS5D01G182500 chr5A 375568130 375574054 5924 True 1045.285714 1899 90.709714 473 6048 7 chr5A.!!$R2 5575

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
474 475 0.036294 GCCCCGTTAGAGTTGCTCTT 60.036 55.000 3.87 0.00 41.50 2.85 F
1536 1581 0.247736 ACGCCTTTTGTTTGCACCAA 59.752 45.000 0.00 0.00 0.00 3.67 F
1546 1591 0.908198 TTTGCACCAAAAGGTTGCCT 59.092 45.000 0.00 0.00 33.01 4.75 F
1674 1724 1.191647 GCGAATCGACGTGTTGTTTCT 59.808 47.619 6.91 0.00 35.59 2.52 F
2600 2790 0.035152 TGGAGAATTCTGCGGCACAT 60.035 50.000 20.39 0.00 37.10 3.21 F
2710 2918 0.238553 GCAACTTTCTCCGCTGTTCC 59.761 55.000 0.00 0.00 0.00 3.62 F
3203 3418 1.525535 CATGCAGCTGCCTACTCCC 60.526 63.158 34.64 6.50 41.18 4.30 F
4481 5446 0.736636 CATGCCCAGCACATGTGTAG 59.263 55.000 26.01 18.01 43.04 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1638 1688 0.108520 TCGCACCCAGTAACCGATTC 60.109 55.000 0.00 0.0 0.00 2.52 R
2543 2733 0.035439 AACAGAAGGGCATGGTACCG 60.035 55.000 7.57 0.0 0.00 4.02 R
2582 2772 0.379669 CATGTGCCGCAGAATTCTCC 59.620 55.000 4.57 0.0 0.00 3.71 R
3347 3574 2.416747 TGAAACTCAAGAGACATGCCG 58.583 47.619 3.73 0.0 0.00 5.69 R
3840 4805 0.105760 TGCAGACACCCCCAAAACAT 60.106 50.000 0.00 0.0 0.00 2.71 R
3934 4899 1.276622 TGGGTAAAGACTGAGAGGCC 58.723 55.000 0.00 0.0 0.00 5.19 R
4792 5762 1.075659 GGGCTTGGGCTGAAGTCTT 59.924 57.895 2.30 0.0 38.73 3.01 R
5474 6445 0.521735 CACGTAGGAAAAGGCTTGGC 59.478 55.000 0.00 0.0 0.00 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.988379 TTCAAGGTGAGAATGTTGTGC 57.012 42.857 0.00 0.00 0.00 4.57
22 23 2.229792 TCAAGGTGAGAATGTTGTGCC 58.770 47.619 0.00 0.00 0.00 5.01
23 24 2.158623 TCAAGGTGAGAATGTTGTGCCT 60.159 45.455 0.00 0.00 0.00 4.75
24 25 1.901591 AGGTGAGAATGTTGTGCCTG 58.098 50.000 0.00 0.00 0.00 4.85
25 26 1.421268 AGGTGAGAATGTTGTGCCTGA 59.579 47.619 0.00 0.00 0.00 3.86
26 27 1.808945 GGTGAGAATGTTGTGCCTGAG 59.191 52.381 0.00 0.00 0.00 3.35
27 28 1.198637 GTGAGAATGTTGTGCCTGAGC 59.801 52.381 0.00 0.00 40.48 4.26
36 37 2.271173 TGCCTGAGCATGGAGCAG 59.729 61.111 0.00 0.00 46.52 4.24
37 38 3.989838 TGCCTGAGCATGGAGCAGC 62.990 63.158 0.00 0.00 46.52 5.25
43 44 3.524606 GCATGGAGCAGCGGCAAT 61.525 61.111 12.44 0.00 44.61 3.56
44 45 2.411701 CATGGAGCAGCGGCAATG 59.588 61.111 12.44 8.10 44.61 2.82
45 46 2.044650 ATGGAGCAGCGGCAATGT 60.045 55.556 12.44 0.00 44.61 2.71
46 47 1.679977 ATGGAGCAGCGGCAATGTT 60.680 52.632 12.44 0.00 44.61 2.71
47 48 1.252904 ATGGAGCAGCGGCAATGTTT 61.253 50.000 12.44 0.00 44.61 2.83
48 49 1.444895 GGAGCAGCGGCAATGTTTG 60.445 57.895 12.44 0.00 44.61 2.93
49 50 1.580942 GAGCAGCGGCAATGTTTGA 59.419 52.632 12.44 0.00 44.61 2.69
50 51 0.039256 GAGCAGCGGCAATGTTTGAA 60.039 50.000 12.44 0.00 44.61 2.69
51 52 0.318955 AGCAGCGGCAATGTTTGAAC 60.319 50.000 12.44 0.00 44.61 3.18
52 53 0.597118 GCAGCGGCAATGTTTGAACA 60.597 50.000 3.18 0.00 40.94 3.18
53 54 1.411394 CAGCGGCAATGTTTGAACAG 58.589 50.000 1.45 0.00 43.04 3.16
54 55 1.032014 AGCGGCAATGTTTGAACAGT 58.968 45.000 1.45 0.00 43.04 3.55
55 56 1.408702 AGCGGCAATGTTTGAACAGTT 59.591 42.857 1.45 0.00 43.04 3.16
56 57 1.786579 GCGGCAATGTTTGAACAGTTC 59.213 47.619 6.32 6.32 43.04 3.01
57 58 2.797792 GCGGCAATGTTTGAACAGTTCA 60.798 45.455 12.24 12.24 43.04 3.18
58 59 2.788786 CGGCAATGTTTGAACAGTTCAC 59.211 45.455 15.93 6.24 43.04 3.18
59 60 3.123050 GGCAATGTTTGAACAGTTCACC 58.877 45.455 15.93 9.93 43.04 4.02
60 61 3.123050 GCAATGTTTGAACAGTTCACCC 58.877 45.455 15.93 9.59 43.04 4.61
61 62 3.430098 GCAATGTTTGAACAGTTCACCCA 60.430 43.478 15.93 14.65 43.04 4.51
62 63 4.362279 CAATGTTTGAACAGTTCACCCAG 58.638 43.478 15.93 0.96 43.04 4.45
63 64 3.080300 TGTTTGAACAGTTCACCCAGT 57.920 42.857 15.93 0.00 39.87 4.00
64 65 3.426615 TGTTTGAACAGTTCACCCAGTT 58.573 40.909 15.93 0.00 39.87 3.16
65 66 3.829601 TGTTTGAACAGTTCACCCAGTTT 59.170 39.130 15.93 0.00 39.87 2.66
66 67 4.082463 TGTTTGAACAGTTCACCCAGTTTC 60.082 41.667 15.93 1.92 39.87 2.78
67 68 3.358111 TGAACAGTTCACCCAGTTTCA 57.642 42.857 12.24 0.00 34.08 2.69
68 69 3.897239 TGAACAGTTCACCCAGTTTCAT 58.103 40.909 12.24 0.00 34.08 2.57
69 70 3.882888 TGAACAGTTCACCCAGTTTCATC 59.117 43.478 12.24 0.00 34.08 2.92
70 71 3.576078 ACAGTTCACCCAGTTTCATCA 57.424 42.857 0.00 0.00 0.00 3.07
71 72 4.104383 ACAGTTCACCCAGTTTCATCAT 57.896 40.909 0.00 0.00 0.00 2.45
72 73 3.822735 ACAGTTCACCCAGTTTCATCATG 59.177 43.478 0.00 0.00 0.00 3.07
73 74 4.074259 CAGTTCACCCAGTTTCATCATGA 58.926 43.478 0.00 0.00 0.00 3.07
74 75 4.074970 AGTTCACCCAGTTTCATCATGAC 58.925 43.478 0.00 0.00 0.00 3.06
75 76 3.786368 TCACCCAGTTTCATCATGACA 57.214 42.857 0.00 0.00 0.00 3.58
76 77 3.411446 TCACCCAGTTTCATCATGACAC 58.589 45.455 0.00 0.00 0.00 3.67
77 78 2.160219 CACCCAGTTTCATCATGACACG 59.840 50.000 0.00 0.00 32.67 4.49
78 79 1.131126 CCCAGTTTCATCATGACACGC 59.869 52.381 0.00 0.00 32.67 5.34
79 80 1.201954 CCAGTTTCATCATGACACGCG 60.202 52.381 3.53 3.53 32.67 6.01
80 81 1.460743 CAGTTTCATCATGACACGCGT 59.539 47.619 5.58 5.58 32.67 6.01
81 82 1.460743 AGTTTCATCATGACACGCGTG 59.539 47.619 35.99 35.99 32.67 5.34
82 83 1.459209 GTTTCATCATGACACGCGTGA 59.541 47.619 42.94 24.35 46.01 4.35
86 87 2.454921 TCATGACACGCGTGATTGG 58.545 52.632 42.94 27.54 37.60 3.16
87 88 0.037790 TCATGACACGCGTGATTGGA 60.038 50.000 42.94 29.12 37.60 3.53
88 89 0.795698 CATGACACGCGTGATTGGAA 59.204 50.000 42.94 21.39 35.44 3.53
89 90 1.196581 CATGACACGCGTGATTGGAAA 59.803 47.619 42.94 20.07 35.44 3.13
90 91 1.300481 TGACACGCGTGATTGGAAAA 58.700 45.000 42.94 16.66 0.00 2.29
91 92 1.003331 TGACACGCGTGATTGGAAAAC 60.003 47.619 42.94 20.73 0.00 2.43
92 93 1.263217 GACACGCGTGATTGGAAAACT 59.737 47.619 42.94 18.67 0.00 2.66
93 94 1.263217 ACACGCGTGATTGGAAAACTC 59.737 47.619 42.94 0.00 0.00 3.01
94 95 1.262950 CACGCGTGATTGGAAAACTCA 59.737 47.619 34.93 0.00 0.00 3.41
95 96 1.263217 ACGCGTGATTGGAAAACTCAC 59.737 47.619 12.93 0.00 36.72 3.51
99 100 2.650608 GTGATTGGAAAACTCACGTGC 58.349 47.619 11.67 0.00 30.97 5.34
100 101 2.032799 GTGATTGGAAAACTCACGTGCA 59.967 45.455 11.67 0.00 30.97 4.57
101 102 2.685388 TGATTGGAAAACTCACGTGCAA 59.315 40.909 11.67 7.83 0.00 4.08
102 103 2.553079 TTGGAAAACTCACGTGCAAC 57.447 45.000 11.67 0.00 0.00 4.17
103 104 1.745232 TGGAAAACTCACGTGCAACT 58.255 45.000 11.67 0.00 31.75 3.16
104 105 1.400142 TGGAAAACTCACGTGCAACTG 59.600 47.619 11.67 0.88 31.75 3.16
105 106 1.466855 GAAAACTCACGTGCAACTGC 58.533 50.000 11.67 0.00 42.50 4.40
131 132 8.657074 AAAATGATTTGATTGAGCATATGTGG 57.343 30.769 4.29 0.00 0.00 4.17
132 133 5.777850 TGATTTGATTGAGCATATGTGGG 57.222 39.130 4.29 0.00 0.00 4.61
133 134 4.038282 TGATTTGATTGAGCATATGTGGGC 59.962 41.667 4.29 0.00 0.00 5.36
134 135 3.301794 TTGATTGAGCATATGTGGGCT 57.698 42.857 4.29 0.00 44.48 5.19
140 141 2.742428 AGCATATGTGGGCTCATGTT 57.258 45.000 4.29 0.00 34.76 2.71
141 142 2.304092 AGCATATGTGGGCTCATGTTG 58.696 47.619 4.29 0.00 34.76 3.33
142 143 1.338973 GCATATGTGGGCTCATGTTGG 59.661 52.381 4.29 0.00 0.00 3.77
143 144 1.338973 CATATGTGGGCTCATGTTGGC 59.661 52.381 0.00 0.00 0.00 4.52
144 145 0.330941 TATGTGGGCTCATGTTGGCA 59.669 50.000 14.32 0.00 0.00 4.92
145 146 0.542467 ATGTGGGCTCATGTTGGCAA 60.542 50.000 14.32 0.00 0.00 4.52
146 147 1.290009 GTGGGCTCATGTTGGCAAC 59.710 57.895 23.12 23.12 0.00 4.17
147 148 1.907807 TGGGCTCATGTTGGCAACC 60.908 57.895 26.31 10.64 0.00 3.77
148 149 1.907807 GGGCTCATGTTGGCAACCA 60.908 57.895 26.31 15.17 0.00 3.67
149 150 1.470996 GGGCTCATGTTGGCAACCAA 61.471 55.000 26.31 10.36 41.69 3.67
150 151 0.609662 GGCTCATGTTGGCAACCAAT 59.390 50.000 26.31 12.28 45.80 3.16
151 152 1.824230 GGCTCATGTTGGCAACCAATA 59.176 47.619 26.31 9.22 45.80 1.90
152 153 2.159198 GGCTCATGTTGGCAACCAATAG 60.159 50.000 26.31 18.18 45.80 1.73
153 154 2.754552 GCTCATGTTGGCAACCAATAGA 59.245 45.455 26.31 15.20 45.80 1.98
154 155 3.382546 GCTCATGTTGGCAACCAATAGAT 59.617 43.478 26.31 10.10 45.80 1.98
155 156 4.735578 GCTCATGTTGGCAACCAATAGATG 60.736 45.833 26.31 20.43 45.80 2.90
156 157 4.343231 TCATGTTGGCAACCAATAGATGT 58.657 39.130 26.31 0.10 45.80 3.06
157 158 5.504853 TCATGTTGGCAACCAATAGATGTA 58.495 37.500 26.31 5.08 45.80 2.29
158 159 6.128486 TCATGTTGGCAACCAATAGATGTAT 58.872 36.000 26.31 7.24 45.80 2.29
159 160 6.262944 TCATGTTGGCAACCAATAGATGTATC 59.737 38.462 26.31 0.00 45.80 2.24
160 161 5.754782 TGTTGGCAACCAATAGATGTATCT 58.245 37.500 26.31 0.00 45.80 1.98
161 162 6.186957 TGTTGGCAACCAATAGATGTATCTT 58.813 36.000 26.31 0.00 45.80 2.40
162 163 6.318648 TGTTGGCAACCAATAGATGTATCTTC 59.681 38.462 26.31 0.00 45.80 2.87
163 164 6.252599 TGGCAACCAATAGATGTATCTTCT 57.747 37.500 0.00 0.00 38.32 2.85
164 165 6.662755 TGGCAACCAATAGATGTATCTTCTT 58.337 36.000 0.00 0.00 38.32 2.52
165 166 7.118723 TGGCAACCAATAGATGTATCTTCTTT 58.881 34.615 0.00 0.00 38.32 2.52
166 167 8.271458 TGGCAACCAATAGATGTATCTTCTTTA 58.729 33.333 0.00 0.00 38.32 1.85
167 168 9.289782 GGCAACCAATAGATGTATCTTCTTTAT 57.710 33.333 0.00 0.00 38.32 1.40
171 172 9.712305 ACCAATAGATGTATCTTCTTTATTCGG 57.288 33.333 0.00 2.14 38.32 4.30
172 173 9.712305 CCAATAGATGTATCTTCTTTATTCGGT 57.288 33.333 0.00 0.00 38.32 4.69
176 177 7.920738 AGATGTATCTTCTTTATTCGGTTTGC 58.079 34.615 0.00 0.00 31.97 3.68
177 178 7.552687 AGATGTATCTTCTTTATTCGGTTTGCA 59.447 33.333 0.00 0.00 31.97 4.08
178 179 7.441890 TGTATCTTCTTTATTCGGTTTGCAA 57.558 32.000 0.00 0.00 0.00 4.08
179 180 7.877003 TGTATCTTCTTTATTCGGTTTGCAAA 58.123 30.769 8.05 8.05 0.00 3.68
180 181 8.353684 TGTATCTTCTTTATTCGGTTTGCAAAA 58.646 29.630 14.67 0.00 0.00 2.44
181 182 7.637709 ATCTTCTTTATTCGGTTTGCAAAAC 57.362 32.000 17.50 17.50 0.00 2.43
182 183 6.801575 TCTTCTTTATTCGGTTTGCAAAACT 58.198 32.000 24.00 9.05 0.00 2.66
183 184 7.932335 TCTTCTTTATTCGGTTTGCAAAACTA 58.068 30.769 24.00 11.61 0.00 2.24
184 185 8.573035 TCTTCTTTATTCGGTTTGCAAAACTAT 58.427 29.630 24.00 18.27 0.00 2.12
185 186 8.514136 TTCTTTATTCGGTTTGCAAAACTATG 57.486 30.769 24.00 9.73 0.00 2.23
186 187 7.653647 TCTTTATTCGGTTTGCAAAACTATGT 58.346 30.769 24.00 10.36 0.00 2.29
187 188 7.593273 TCTTTATTCGGTTTGCAAAACTATGTG 59.407 33.333 24.00 9.01 0.00 3.21
188 189 4.902443 TTCGGTTTGCAAAACTATGTGA 57.098 36.364 24.00 11.21 0.00 3.58
189 190 4.481930 TCGGTTTGCAAAACTATGTGAG 57.518 40.909 24.00 7.59 0.00 3.51
190 191 4.130857 TCGGTTTGCAAAACTATGTGAGA 58.869 39.130 24.00 9.81 0.00 3.27
191 192 4.024387 TCGGTTTGCAAAACTATGTGAGAC 60.024 41.667 24.00 3.41 0.00 3.36
192 193 4.260990 CGGTTTGCAAAACTATGTGAGACA 60.261 41.667 24.00 0.00 0.00 3.41
193 194 5.562696 CGGTTTGCAAAACTATGTGAGACAT 60.563 40.000 24.00 0.00 42.35 3.06
194 195 6.215845 GGTTTGCAAAACTATGTGAGACATT 58.784 36.000 20.05 0.00 39.88 2.71
195 196 6.701400 GGTTTGCAAAACTATGTGAGACATTT 59.299 34.615 20.05 0.00 39.88 2.32
196 197 7.224557 GGTTTGCAAAACTATGTGAGACATTTT 59.775 33.333 20.05 0.00 39.88 1.82
197 198 8.603181 GTTTGCAAAACTATGTGAGACATTTTT 58.397 29.630 14.67 0.00 39.88 1.94
198 199 9.809096 TTTGCAAAACTATGTGAGACATTTTTA 57.191 25.926 10.02 0.00 39.88 1.52
199 200 8.795786 TGCAAAACTATGTGAGACATTTTTAC 57.204 30.769 0.00 0.00 39.88 2.01
200 201 8.629158 TGCAAAACTATGTGAGACATTTTTACT 58.371 29.630 0.00 0.00 39.88 2.24
201 202 9.463443 GCAAAACTATGTGAGACATTTTTACTT 57.537 29.630 0.00 0.00 39.88 2.24
209 210 9.840427 ATGTGAGACATTTTTACTTTTATTCGG 57.160 29.630 0.00 0.00 34.67 4.30
210 211 9.058174 TGTGAGACATTTTTACTTTTATTCGGA 57.942 29.630 0.00 0.00 0.00 4.55
214 215 9.353999 AGACATTTTTACTTTTATTCGGATTGC 57.646 29.630 0.00 0.00 0.00 3.56
215 216 9.134734 GACATTTTTACTTTTATTCGGATTGCA 57.865 29.630 0.00 0.00 0.00 4.08
216 217 9.482627 ACATTTTTACTTTTATTCGGATTGCAA 57.517 25.926 0.00 0.00 0.00 4.08
220 221 9.535878 TTTTACTTTTATTCGGATTGCAAAACT 57.464 25.926 1.71 0.00 0.00 2.66
223 224 8.687824 ACTTTTATTCGGATTGCAAAACTATG 57.312 30.769 1.71 0.00 0.00 2.23
224 225 7.275560 ACTTTTATTCGGATTGCAAAACTATGC 59.724 33.333 1.71 0.00 46.58 3.14
225 226 4.989279 ATTCGGATTGCAAAACTATGCT 57.011 36.364 1.71 0.00 46.54 3.79
226 227 7.561021 TTATTCGGATTGCAAAACTATGCTA 57.439 32.000 1.71 0.00 46.54 3.49
227 228 6.639632 ATTCGGATTGCAAAACTATGCTAT 57.360 33.333 1.71 0.00 46.54 2.97
228 229 6.449635 TTCGGATTGCAAAACTATGCTATT 57.550 33.333 1.71 0.00 46.54 1.73
229 230 6.449635 TCGGATTGCAAAACTATGCTATTT 57.550 33.333 1.71 0.00 46.54 1.40
230 231 6.862209 TCGGATTGCAAAACTATGCTATTTT 58.138 32.000 1.71 0.00 46.54 1.82
231 232 7.990917 TCGGATTGCAAAACTATGCTATTTTA 58.009 30.769 1.71 0.00 46.54 1.52
232 233 8.629158 TCGGATTGCAAAACTATGCTATTTTAT 58.371 29.630 1.71 0.00 46.54 1.40
233 234 9.248291 CGGATTGCAAAACTATGCTATTTTATT 57.752 29.630 1.71 0.00 46.54 1.40
236 237 9.801873 ATTGCAAAACTATGCTATTTTATTCGT 57.198 25.926 1.71 0.00 46.54 3.85
237 238 9.632807 TTGCAAAACTATGCTATTTTATTCGTT 57.367 25.926 0.00 0.00 46.54 3.85
238 239 9.632807 TGCAAAACTATGCTATTTTATTCGTTT 57.367 25.926 0.67 0.00 46.54 3.60
239 240 9.885743 GCAAAACTATGCTATTTTATTCGTTTG 57.114 29.630 0.00 0.00 43.06 2.93
280 281 5.971895 ATTGAATGCAAAAGTTGTGTGTC 57.028 34.783 0.00 0.00 37.59 3.67
281 282 4.446994 TGAATGCAAAAGTTGTGTGTCA 57.553 36.364 0.00 0.00 0.00 3.58
282 283 4.814147 TGAATGCAAAAGTTGTGTGTCAA 58.186 34.783 0.00 0.00 0.00 3.18
283 284 5.233225 TGAATGCAAAAGTTGTGTGTCAAA 58.767 33.333 0.00 0.00 37.81 2.69
284 285 5.119898 TGAATGCAAAAGTTGTGTGTCAAAC 59.880 36.000 0.00 0.00 37.81 2.93
285 286 3.982475 TGCAAAAGTTGTGTGTCAAACA 58.018 36.364 0.00 0.00 37.81 2.83
286 287 4.371786 TGCAAAAGTTGTGTGTCAAACAA 58.628 34.783 4.35 4.35 41.57 2.83
287 288 4.993584 TGCAAAAGTTGTGTGTCAAACAAT 59.006 33.333 11.75 0.00 41.57 2.71
288 289 5.107182 TGCAAAAGTTGTGTGTCAAACAATG 60.107 36.000 11.75 7.25 41.57 2.82
289 290 5.315195 CAAAAGTTGTGTGTCAAACAATGC 58.685 37.500 11.75 0.52 41.57 3.56
290 291 3.865011 AGTTGTGTGTCAAACAATGCA 57.135 38.095 11.75 0.00 41.57 3.96
291 292 4.185467 AGTTGTGTGTCAAACAATGCAA 57.815 36.364 11.75 0.00 41.57 4.08
292 293 4.564041 AGTTGTGTGTCAAACAATGCAAA 58.436 34.783 11.75 0.00 41.57 3.68
293 294 4.993584 AGTTGTGTGTCAAACAATGCAAAA 59.006 33.333 11.75 0.00 41.57 2.44
294 295 5.468072 AGTTGTGTGTCAAACAATGCAAAAA 59.532 32.000 11.75 0.00 41.57 1.94
322 323 3.893326 ATTTGTTGAAATAGGGCAGCC 57.107 42.857 1.26 1.26 29.49 4.85
323 324 2.300956 TTGTTGAAATAGGGCAGCCA 57.699 45.000 15.19 0.00 0.00 4.75
324 325 1.838112 TGTTGAAATAGGGCAGCCAG 58.162 50.000 15.19 0.00 0.00 4.85
325 326 0.457443 GTTGAAATAGGGCAGCCAGC 59.543 55.000 15.19 0.00 44.65 4.85
344 345 2.203015 GGCCACGCCGTCATGTAT 60.203 61.111 0.00 0.00 39.62 2.29
345 346 2.534019 GGCCACGCCGTCATGTATG 61.534 63.158 0.00 0.00 39.62 2.39
346 347 2.534019 GCCACGCCGTCATGTATGG 61.534 63.158 0.00 0.00 37.31 2.74
347 348 1.887242 CCACGCCGTCATGTATGGG 60.887 63.158 0.00 0.00 34.45 4.00
348 349 1.153449 CACGCCGTCATGTATGGGT 60.153 57.895 0.00 0.00 34.45 4.51
349 350 1.143183 ACGCCGTCATGTATGGGTC 59.857 57.895 0.00 0.00 34.45 4.46
350 351 1.949133 CGCCGTCATGTATGGGTCG 60.949 63.158 0.00 0.00 34.45 4.79
351 352 1.143183 GCCGTCATGTATGGGTCGT 59.857 57.895 0.00 0.00 34.45 4.34
352 353 0.874607 GCCGTCATGTATGGGTCGTC 60.875 60.000 0.00 0.00 34.45 4.20
353 354 0.594028 CCGTCATGTATGGGTCGTCG 60.594 60.000 0.00 0.00 0.00 5.12
354 355 1.206745 CGTCATGTATGGGTCGTCGC 61.207 60.000 0.00 0.00 0.00 5.19
355 356 0.179121 GTCATGTATGGGTCGTCGCA 60.179 55.000 1.44 1.44 40.61 5.10
356 357 0.750249 TCATGTATGGGTCGTCGCAT 59.250 50.000 15.64 15.64 46.39 4.73
357 358 1.138069 TCATGTATGGGTCGTCGCATT 59.862 47.619 16.43 0.00 43.12 3.56
358 359 1.261354 CATGTATGGGTCGTCGCATTG 59.739 52.381 16.43 6.52 43.12 2.82
359 360 0.461163 TGTATGGGTCGTCGCATTGG 60.461 55.000 16.43 0.00 43.12 3.16
360 361 1.145156 TATGGGTCGTCGCATTGGG 59.855 57.895 16.43 0.00 43.12 4.12
361 362 2.933878 TATGGGTCGTCGCATTGGGC 62.934 60.000 16.43 0.00 43.12 5.36
378 379 4.160635 CGCACCGCCGACCAAATC 62.161 66.667 0.00 0.00 0.00 2.17
379 380 2.746277 GCACCGCCGACCAAATCT 60.746 61.111 0.00 0.00 0.00 2.40
380 381 1.448893 GCACCGCCGACCAAATCTA 60.449 57.895 0.00 0.00 0.00 1.98
381 382 1.022451 GCACCGCCGACCAAATCTAA 61.022 55.000 0.00 0.00 0.00 2.10
382 383 1.444836 CACCGCCGACCAAATCTAAA 58.555 50.000 0.00 0.00 0.00 1.85
383 384 1.807742 CACCGCCGACCAAATCTAAAA 59.192 47.619 0.00 0.00 0.00 1.52
384 385 1.808343 ACCGCCGACCAAATCTAAAAC 59.192 47.619 0.00 0.00 0.00 2.43
385 386 1.807742 CCGCCGACCAAATCTAAAACA 59.192 47.619 0.00 0.00 0.00 2.83
386 387 2.413634 CCGCCGACCAAATCTAAAACAC 60.414 50.000 0.00 0.00 0.00 3.32
387 388 2.723618 CGCCGACCAAATCTAAAACACG 60.724 50.000 0.00 0.00 0.00 4.49
388 389 2.413634 GCCGACCAAATCTAAAACACGG 60.414 50.000 0.00 0.00 40.60 4.94
389 390 2.413634 CCGACCAAATCTAAAACACGGC 60.414 50.000 0.00 0.00 0.00 5.68
390 391 2.723618 CGACCAAATCTAAAACACGGCG 60.724 50.000 4.80 4.80 0.00 6.46
391 392 1.538075 ACCAAATCTAAAACACGGCGG 59.462 47.619 13.24 2.35 0.00 6.13
392 393 1.807742 CCAAATCTAAAACACGGCGGA 59.192 47.619 13.24 0.00 0.00 5.54
393 394 2.413634 CCAAATCTAAAACACGGCGGAC 60.414 50.000 13.24 0.00 0.00 4.79
421 422 2.744709 CGGCCGACCCAAACGAAT 60.745 61.111 24.07 0.00 0.00 3.34
422 423 1.448189 CGGCCGACCCAAACGAATA 60.448 57.895 24.07 0.00 0.00 1.75
423 424 1.020333 CGGCCGACCCAAACGAATAA 61.020 55.000 24.07 0.00 0.00 1.40
424 425 1.166989 GGCCGACCCAAACGAATAAA 58.833 50.000 0.00 0.00 0.00 1.40
425 426 1.540707 GGCCGACCCAAACGAATAAAA 59.459 47.619 0.00 0.00 0.00 1.52
426 427 2.030096 GGCCGACCCAAACGAATAAAAA 60.030 45.455 0.00 0.00 0.00 1.94
446 447 3.967734 CGGACAAAAGCACCGTATG 57.032 52.632 0.00 0.00 41.47 2.39
447 448 1.153353 CGGACAAAAGCACCGTATGT 58.847 50.000 0.00 0.00 41.47 2.29
448 449 1.533731 CGGACAAAAGCACCGTATGTT 59.466 47.619 0.00 0.00 41.47 2.71
449 450 2.031508 CGGACAAAAGCACCGTATGTTT 60.032 45.455 0.00 0.00 41.47 2.83
450 451 3.305110 GGACAAAAGCACCGTATGTTTG 58.695 45.455 0.00 0.00 31.16 2.93
451 452 3.305110 GACAAAAGCACCGTATGTTTGG 58.695 45.455 0.00 0.00 31.58 3.28
452 453 2.035321 ACAAAAGCACCGTATGTTTGGG 59.965 45.455 0.00 0.00 31.58 4.12
453 454 1.989706 AAAGCACCGTATGTTTGGGT 58.010 45.000 0.00 0.00 31.16 4.51
454 455 1.530323 AAGCACCGTATGTTTGGGTC 58.470 50.000 0.00 0.00 29.28 4.46
455 456 0.672401 AGCACCGTATGTTTGGGTCG 60.672 55.000 0.00 0.00 29.82 4.79
456 457 1.791662 CACCGTATGTTTGGGTCGC 59.208 57.895 0.00 0.00 29.82 5.19
457 458 1.376295 ACCGTATGTTTGGGTCGCC 60.376 57.895 0.00 0.00 0.00 5.54
458 459 2.110352 CCGTATGTTTGGGTCGCCC 61.110 63.158 7.87 7.87 45.71 6.13
467 468 3.073101 GGGTCGCCCCGTTAGAGT 61.073 66.667 3.73 0.00 42.41 3.24
468 469 2.653087 GGGTCGCCCCGTTAGAGTT 61.653 63.158 3.73 0.00 42.41 3.01
469 470 1.447314 GGTCGCCCCGTTAGAGTTG 60.447 63.158 0.00 0.00 0.00 3.16
470 471 2.098831 GTCGCCCCGTTAGAGTTGC 61.099 63.158 0.00 0.00 0.00 4.17
471 472 2.264794 CGCCCCGTTAGAGTTGCT 59.735 61.111 0.00 0.00 0.00 3.91
472 473 1.810030 CGCCCCGTTAGAGTTGCTC 60.810 63.158 0.00 0.00 0.00 4.26
473 474 1.597461 GCCCCGTTAGAGTTGCTCT 59.403 57.895 4.02 4.02 43.83 4.09
474 475 0.036294 GCCCCGTTAGAGTTGCTCTT 60.036 55.000 3.87 0.00 41.50 2.85
475 476 1.206371 GCCCCGTTAGAGTTGCTCTTA 59.794 52.381 3.87 0.00 41.50 2.10
476 477 2.889852 CCCCGTTAGAGTTGCTCTTAC 58.110 52.381 3.87 4.80 41.50 2.34
477 478 2.232941 CCCCGTTAGAGTTGCTCTTACA 59.767 50.000 13.37 0.00 39.27 2.41
478 479 3.118738 CCCCGTTAGAGTTGCTCTTACAT 60.119 47.826 13.37 0.00 39.27 2.29
524 525 1.081892 CTGTGAACCGAATGAGCCAG 58.918 55.000 0.00 0.00 0.00 4.85
539 540 3.495124 CCAGGAAATGGCGTTTGTG 57.505 52.632 9.87 6.77 43.83 3.33
872 892 2.575461 GCCAATGCCAGGTCAAGC 59.425 61.111 0.00 0.00 0.00 4.01
875 895 3.064324 AATGCCAGGTCAAGCGCC 61.064 61.111 2.29 0.00 0.00 6.53
1509 1542 4.065088 TCAACATCTACAACAAGCAGGTC 58.935 43.478 0.00 0.00 0.00 3.85
1527 1560 2.519302 AGCTGCCACGCCTTTTGT 60.519 55.556 0.00 0.00 0.00 2.83
1532 1577 1.520342 GCCACGCCTTTTGTTTGCA 60.520 52.632 0.00 0.00 0.00 4.08
1533 1578 1.761244 GCCACGCCTTTTGTTTGCAC 61.761 55.000 0.00 0.00 0.00 4.57
1534 1579 1.151172 CCACGCCTTTTGTTTGCACC 61.151 55.000 0.00 0.00 0.00 5.01
1535 1580 0.459237 CACGCCTTTTGTTTGCACCA 60.459 50.000 0.00 0.00 0.00 4.17
1536 1581 0.247736 ACGCCTTTTGTTTGCACCAA 59.752 45.000 0.00 0.00 0.00 3.67
1537 1582 1.338200 ACGCCTTTTGTTTGCACCAAA 60.338 42.857 6.63 6.63 0.00 3.28
1538 1583 1.734465 CGCCTTTTGTTTGCACCAAAA 59.266 42.857 17.77 17.77 38.95 2.44
1543 1588 4.756084 TTTTGTTTGCACCAAAAGGTTG 57.244 36.364 15.83 0.00 36.99 3.77
1544 1589 1.731720 TGTTTGCACCAAAAGGTTGC 58.268 45.000 0.00 0.00 35.03 4.17
1545 1590 1.013596 GTTTGCACCAAAAGGTTGCC 58.986 50.000 0.00 0.00 35.03 4.52
1546 1591 0.908198 TTTGCACCAAAAGGTTGCCT 59.092 45.000 0.00 0.00 33.01 4.75
1569 1614 2.254546 TCTGTTCTGTTGCGTCCAAT 57.745 45.000 0.00 0.00 32.75 3.16
1574 1619 3.249799 TGTTCTGTTGCGTCCAATGTTAG 59.750 43.478 0.00 0.00 32.75 2.34
1575 1620 1.804151 TCTGTTGCGTCCAATGTTAGC 59.196 47.619 0.00 0.00 32.75 3.09
1592 1642 4.167268 GTTAGCTCTTGTAGTCCTTCGTG 58.833 47.826 0.00 0.00 0.00 4.35
1632 1682 6.983307 CCTTCTAGTTCGATCTGATCAATTGT 59.017 38.462 17.19 1.02 0.00 2.71
1638 1688 3.136763 CGATCTGATCAATTGTCCTGGG 58.863 50.000 17.19 0.00 0.00 4.45
1667 1717 2.431942 GGGTGCGAATCGACGTGT 60.432 61.111 6.91 0.00 35.59 4.49
1674 1724 1.191647 GCGAATCGACGTGTTGTTTCT 59.808 47.619 6.91 0.00 35.59 2.52
1685 1735 3.984633 CGTGTTGTTTCTGTTGTTTTGGT 59.015 39.130 0.00 0.00 0.00 3.67
1704 1755 2.351157 GGTGCGTTCGTAGTCTTGTAGT 60.351 50.000 0.00 0.00 0.00 2.73
1714 1765 5.351740 TCGTAGTCTTGTAGTGACAGATCTG 59.648 44.000 21.37 21.37 36.76 2.90
1777 1828 3.448301 TGACATTGCATGGAAATTCCTCC 59.552 43.478 13.78 2.26 37.46 4.30
1779 1830 3.703052 ACATTGCATGGAAATTCCTCCTC 59.297 43.478 13.78 0.99 37.46 3.71
1786 1837 1.843206 GGAAATTCCTCCTCCAGCTCT 59.157 52.381 4.46 0.00 32.53 4.09
1794 1845 4.366267 TCCTCCTCCAGCTCTTTATTTCT 58.634 43.478 0.00 0.00 0.00 2.52
1838 1892 5.116180 GGAGTGATCATTTGGTGAATCGTA 58.884 41.667 0.00 0.00 40.97 3.43
1878 1932 5.898174 TCTAACTGAACTGAACTTGTCGAA 58.102 37.500 0.00 0.00 0.00 3.71
1958 2021 3.213249 ACGTCAGACCGAAGAACATAC 57.787 47.619 0.00 0.00 0.00 2.39
1980 2045 4.580580 ACTGAACTTGAATCGCCTTTTCTT 59.419 37.500 0.00 0.00 0.00 2.52
1984 2049 5.470845 ACTTGAATCGCCTTTTCTTATCG 57.529 39.130 0.00 0.00 0.00 2.92
1992 2057 4.922692 TCGCCTTTTCTTATCGAACGTTTA 59.077 37.500 0.46 0.00 0.00 2.01
2019 2084 8.411318 CATAAGTGCATAAATTTTCAAGACCC 57.589 34.615 0.00 0.00 0.00 4.46
2021 2086 4.837860 AGTGCATAAATTTTCAAGACCCCA 59.162 37.500 0.00 0.00 0.00 4.96
2023 2088 5.812127 GTGCATAAATTTTCAAGACCCCATC 59.188 40.000 0.00 0.00 0.00 3.51
2030 2095 1.753903 TCAAGACCCCATCCCAGAAA 58.246 50.000 0.00 0.00 0.00 2.52
2050 2115 4.851639 AACCAGGATCAGTAGAAGCAAT 57.148 40.909 0.00 0.00 0.00 3.56
2052 2117 4.521146 ACCAGGATCAGTAGAAGCAATTG 58.479 43.478 0.00 0.00 0.00 2.32
2060 2125 7.172361 GGATCAGTAGAAGCAATTGATTCCTAC 59.828 40.741 27.97 25.38 41.02 3.18
2155 2312 3.715628 TCTTTGCTGGAGCTTTTTGAC 57.284 42.857 0.00 0.00 42.66 3.18
2165 2322 4.338118 TGGAGCTTTTTGACGAATGTCTTT 59.662 37.500 0.00 0.00 45.70 2.52
2175 2332 8.601845 TTTGACGAATGTCTTTAGATTCAGAA 57.398 30.769 0.00 0.00 45.70 3.02
2198 2355 8.836413 AGAAATGTCTAAGTTCACGATTTTTCA 58.164 29.630 0.00 0.00 29.93 2.69
2232 2389 6.007076 TGAAATACTGTACCATTTTGCCTCA 58.993 36.000 0.00 0.00 0.00 3.86
2237 2420 8.766994 ATACTGTACCATTTTGCCTCATATTT 57.233 30.769 0.00 0.00 0.00 1.40
2284 2473 5.072741 AGACAATTGTTGAACCTGTAGCAT 58.927 37.500 13.36 0.00 0.00 3.79
2326 2515 5.432885 AAGTGTATAAAAGTTGCAACGCT 57.567 34.783 23.21 12.32 0.00 5.07
2344 2533 2.112718 GCATGCCAGAGCCTAGGG 59.887 66.667 11.72 0.00 38.69 3.53
2348 2537 1.701847 CATGCCAGAGCCTAGGGTTAT 59.298 52.381 16.14 4.25 38.69 1.89
2398 2588 3.303406 GTTTTTCTGTCTGCTGCATGTC 58.697 45.455 1.31 0.00 0.00 3.06
2408 2598 2.943690 CTGCTGCATGTCAGAATAAGCT 59.056 45.455 17.76 0.00 45.72 3.74
2443 2633 7.496346 ACTTCACTCAGGGTCTTTCATAATA 57.504 36.000 0.00 0.00 0.00 0.98
2453 2643 6.442564 AGGGTCTTTCATAATACACTGTACCA 59.557 38.462 0.00 0.00 0.00 3.25
2456 2646 9.826574 GGTCTTTCATAATACACTGTACCAATA 57.173 33.333 0.00 0.00 0.00 1.90
2494 2684 7.327975 TGGCTTTAATCCTACGGACATATATG 58.672 38.462 11.29 11.29 32.98 1.78
2511 2701 9.941664 GACATATATGTTCATTTCTTTGTCCAG 57.058 33.333 19.19 0.00 41.95 3.86
2534 2724 6.149308 CAGTATTTGTGCCTCTGTGATTACAA 59.851 38.462 0.00 0.00 36.14 2.41
2543 2733 7.274250 GTGCCTCTGTGATTACAAATTTGAATC 59.726 37.037 24.64 23.48 36.14 2.52
2582 2772 6.038161 TCTGTTTTCTGGTGAGTGTGTAAATG 59.962 38.462 0.00 0.00 0.00 2.32
2598 2788 1.098050 AATGGAGAATTCTGCGGCAC 58.902 50.000 20.39 2.04 37.10 5.01
2600 2790 0.035152 TGGAGAATTCTGCGGCACAT 60.035 50.000 20.39 0.00 37.10 3.21
2615 2805 4.031652 GCGGCACATGTTTTGTTAATGATC 59.968 41.667 0.00 0.00 36.00 2.92
2710 2918 0.238553 GCAACTTTCTCCGCTGTTCC 59.761 55.000 0.00 0.00 0.00 3.62
2714 2922 4.755411 CAACTTTCTCCGCTGTTCCTATA 58.245 43.478 0.00 0.00 0.00 1.31
2728 2936 5.989477 TGTTCCTATATTTGACAGGTCCTG 58.011 41.667 17.88 17.88 37.52 3.86
2985 3193 2.893424 ACCATGGGCAATCTTTTCACT 58.107 42.857 18.09 0.00 0.00 3.41
3127 3335 6.536941 GTCCTCTGTTAGATCTTCCATGAAAC 59.463 42.308 0.00 0.00 0.00 2.78
3137 3345 6.816640 AGATCTTCCATGAAACATTGCAAATG 59.183 34.615 1.71 5.27 0.00 2.32
3203 3418 1.525535 CATGCAGCTGCCTACTCCC 60.526 63.158 34.64 6.50 41.18 4.30
3280 3495 6.377327 TTCTGAAGCTTCTTTTAACTGGTG 57.623 37.500 26.09 3.71 0.00 4.17
3288 3506 6.490040 AGCTTCTTTTAACTGGTGAGCAATAA 59.510 34.615 0.00 0.00 0.00 1.40
3304 3522 8.243426 GTGAGCAATAACACCTTCATTTGAATA 58.757 33.333 0.00 0.00 33.01 1.75
3307 3525 9.643693 AGCAATAACACCTTCATTTGAATAAAG 57.356 29.630 0.00 0.00 33.01 1.85
3316 3534 9.533831 ACCTTCATTTGAATAAAGGAACTGTAT 57.466 29.630 11.73 0.00 41.39 2.29
3347 3574 4.155826 TGTTAGGATGCACATTACAGTTGC 59.844 41.667 0.00 0.00 0.00 4.17
3374 3601 6.314648 GCATGTCTCTTGAGTTTCATATGTGA 59.685 38.462 1.90 0.00 0.00 3.58
3425 3907 8.319881 TCATTTTTGCATTGATATTTTCCTCCA 58.680 29.630 0.00 0.00 0.00 3.86
3665 4630 8.538856 GTTCAGTTCTCTCGAATTATGAATCAG 58.461 37.037 0.00 0.00 34.48 2.90
3815 4780 9.537848 GTTTTAGTCGGTATTGTTGAAGTATTG 57.462 33.333 0.00 0.00 0.00 1.90
3840 4805 7.877612 TGCAGTAGAGATAATTTGTCAAAGTCA 59.122 33.333 0.75 0.00 0.00 3.41
3902 4867 6.147437 TGTGAATGGAGGGGTTAGTAATTT 57.853 37.500 0.00 0.00 0.00 1.82
3949 4914 2.700897 GCATAGGGCCTCTCAGTCTTTA 59.299 50.000 10.74 0.00 36.11 1.85
4124 5089 4.345257 TCACTCCTACTTTTCTGCAGTCTT 59.655 41.667 14.67 0.00 0.00 3.01
4152 5117 7.936847 TGTGAGTATCCACTGTTTATTTGTCTT 59.063 33.333 0.00 0.00 37.89 3.01
4154 5119 7.606456 TGAGTATCCACTGTTTATTTGTCTTCC 59.394 37.037 0.00 0.00 34.21 3.46
4171 5136 8.801882 TTGTCTTCCCAACCTTATAATTACAG 57.198 34.615 0.00 0.00 0.00 2.74
4222 5187 1.605710 CTTGTGCAGGGTCTGAACTTG 59.394 52.381 0.00 0.00 40.51 3.16
4301 5266 6.115446 CAGGTCAGCCATCTATTCAGTTTTA 58.885 40.000 0.00 0.00 37.19 1.52
4332 5297 5.637810 GTGATGGTTCGTCTTGTTAGAATCA 59.362 40.000 0.00 0.00 39.04 2.57
4333 5298 5.637810 TGATGGTTCGTCTTGTTAGAATCAC 59.362 40.000 0.00 0.00 37.76 3.06
4334 5299 5.209818 TGGTTCGTCTTGTTAGAATCACT 57.790 39.130 0.00 0.00 30.94 3.41
4335 5300 5.227908 TGGTTCGTCTTGTTAGAATCACTC 58.772 41.667 0.00 0.00 30.94 3.51
4336 5301 4.626172 GGTTCGTCTTGTTAGAATCACTCC 59.374 45.833 0.00 0.00 30.65 3.85
4337 5302 5.471257 GTTCGTCTTGTTAGAATCACTCCT 58.529 41.667 0.00 0.00 30.65 3.69
4338 5303 5.723672 TCGTCTTGTTAGAATCACTCCTT 57.276 39.130 0.00 0.00 30.65 3.36
4339 5304 5.470368 TCGTCTTGTTAGAATCACTCCTTG 58.530 41.667 0.00 0.00 30.65 3.61
4340 5305 5.010719 TCGTCTTGTTAGAATCACTCCTTGT 59.989 40.000 0.00 0.00 30.65 3.16
4341 5306 5.696724 CGTCTTGTTAGAATCACTCCTTGTT 59.303 40.000 0.00 0.00 30.65 2.83
4342 5307 6.202954 CGTCTTGTTAGAATCACTCCTTGTTT 59.797 38.462 0.00 0.00 30.65 2.83
4343 5308 7.355778 GTCTTGTTAGAATCACTCCTTGTTTG 58.644 38.462 0.00 0.00 30.65 2.93
4344 5309 7.226720 GTCTTGTTAGAATCACTCCTTGTTTGA 59.773 37.037 0.00 0.00 30.65 2.69
4345 5310 7.773224 TCTTGTTAGAATCACTCCTTGTTTGAA 59.227 33.333 0.00 0.00 0.00 2.69
4346 5311 7.873719 TGTTAGAATCACTCCTTGTTTGAAA 57.126 32.000 0.00 0.00 0.00 2.69
4347 5312 7.930217 TGTTAGAATCACTCCTTGTTTGAAAG 58.070 34.615 0.00 0.00 0.00 2.62
4348 5313 7.556275 TGTTAGAATCACTCCTTGTTTGAAAGT 59.444 33.333 0.00 0.00 0.00 2.66
4349 5314 8.406297 GTTAGAATCACTCCTTGTTTGAAAGTT 58.594 33.333 0.00 0.00 0.00 2.66
4350 5315 7.410120 AGAATCACTCCTTGTTTGAAAGTTT 57.590 32.000 0.00 0.00 0.00 2.66
4351 5316 7.840931 AGAATCACTCCTTGTTTGAAAGTTTT 58.159 30.769 0.00 0.00 0.00 2.43
4352 5317 8.966868 AGAATCACTCCTTGTTTGAAAGTTTTA 58.033 29.630 0.00 0.00 0.00 1.52
4353 5318 9.750125 GAATCACTCCTTGTTTGAAAGTTTTAT 57.250 29.630 0.00 0.00 0.00 1.40
4354 5319 9.533253 AATCACTCCTTGTTTGAAAGTTTTATG 57.467 29.630 0.00 0.00 0.00 1.90
4355 5320 8.062065 TCACTCCTTGTTTGAAAGTTTTATGT 57.938 30.769 0.00 0.00 0.00 2.29
4356 5321 8.527810 TCACTCCTTGTTTGAAAGTTTTATGTT 58.472 29.630 0.00 0.00 0.00 2.71
4357 5322 9.150348 CACTCCTTGTTTGAAAGTTTTATGTTT 57.850 29.630 0.00 0.00 0.00 2.83
4358 5323 9.719355 ACTCCTTGTTTGAAAGTTTTATGTTTT 57.281 25.926 0.00 0.00 0.00 2.43
4389 5354 8.514594 TGGATGTCTTTGTTACTTTGATCAATC 58.485 33.333 9.40 0.00 0.00 2.67
4390 5355 7.693951 GGATGTCTTTGTTACTTTGATCAATCG 59.306 37.037 9.40 6.36 0.00 3.34
4391 5356 7.490962 TGTCTTTGTTACTTTGATCAATCGT 57.509 32.000 9.40 11.89 0.00 3.73
4480 5445 2.871021 CATGCCCAGCACATGTGTA 58.129 52.632 26.01 7.46 43.04 2.90
4481 5446 0.736636 CATGCCCAGCACATGTGTAG 59.263 55.000 26.01 18.01 43.04 2.74
4505 5471 2.234908 AGCCTAGGCACTTCTGTACTTG 59.765 50.000 34.70 0.00 44.88 3.16
4512 5478 2.996621 GCACTTCTGTACTTGCTCGAAT 59.003 45.455 0.00 0.00 32.00 3.34
4514 5480 4.083802 GCACTTCTGTACTTGCTCGAATTT 60.084 41.667 0.00 0.00 32.00 1.82
4540 5506 9.706691 TTTCTTACTTGTCTTCTGATTTATCGT 57.293 29.630 0.00 0.00 0.00 3.73
4599 5565 2.543635 ACCCATTCGGTAGGTAACTGT 58.456 47.619 0.00 0.00 45.97 3.55
4629 5595 3.190535 GTGTGGTGGTCATTGTTACATCC 59.809 47.826 0.00 0.00 0.00 3.51
4647 5613 3.107642 TCCGTTCTGTTCTTCAAGACC 57.892 47.619 0.00 0.00 0.00 3.85
4707 5674 3.708563 TCATGTGCGTTCTATCGATCA 57.291 42.857 0.00 0.00 0.00 2.92
4792 5762 6.177610 AGTTTTCCTGTACTCACAACTGAAA 58.822 36.000 0.00 0.00 33.22 2.69
4846 5816 2.196749 CATTCCGTTCGTCAGGATCAG 58.803 52.381 0.00 0.00 36.28 2.90
4849 5819 2.014857 TCCGTTCGTCAGGATCAGTAG 58.985 52.381 0.00 0.00 0.00 2.57
4850 5820 1.065701 CCGTTCGTCAGGATCAGTAGG 59.934 57.143 0.00 0.00 0.00 3.18
4851 5821 1.065701 CGTTCGTCAGGATCAGTAGGG 59.934 57.143 0.00 0.00 0.00 3.53
4852 5822 2.376109 GTTCGTCAGGATCAGTAGGGA 58.624 52.381 0.00 0.00 0.00 4.20
4853 5823 2.350057 TCGTCAGGATCAGTAGGGAG 57.650 55.000 0.00 0.00 0.00 4.30
4854 5824 1.133761 TCGTCAGGATCAGTAGGGAGG 60.134 57.143 0.00 0.00 0.00 4.30
4909 5879 3.394606 AGTTTAGCCGGACATATTGGGAT 59.605 43.478 5.05 0.00 0.00 3.85
5079 6049 1.827344 TGATGAAGTCACCGATGAGCT 59.173 47.619 0.00 0.00 34.75 4.09
5082 6052 1.132453 TGAAGTCACCGATGAGCTACG 59.868 52.381 0.00 0.00 34.75 3.51
5188 6159 9.065871 GTTCATGAACAAGATATTGCAACTTAC 57.934 33.333 29.43 0.00 40.84 2.34
5189 6160 8.565896 TCATGAACAAGATATTGCAACTTACT 57.434 30.769 0.00 0.00 0.00 2.24
5190 6161 9.665719 TCATGAACAAGATATTGCAACTTACTA 57.334 29.630 0.00 0.00 0.00 1.82
5191 6162 9.708222 CATGAACAAGATATTGCAACTTACTAC 57.292 33.333 0.00 0.00 0.00 2.73
5192 6163 8.263940 TGAACAAGATATTGCAACTTACTACC 57.736 34.615 0.00 0.00 0.00 3.18
5193 6164 8.100791 TGAACAAGATATTGCAACTTACTACCT 58.899 33.333 0.00 0.00 0.00 3.08
5194 6165 8.494016 AACAAGATATTGCAACTTACTACCTC 57.506 34.615 0.00 0.00 0.00 3.85
5195 6166 7.048512 ACAAGATATTGCAACTTACTACCTCC 58.951 38.462 0.00 0.00 0.00 4.30
5196 6167 5.844004 AGATATTGCAACTTACTACCTCCG 58.156 41.667 0.00 0.00 0.00 4.63
5197 6168 3.975168 ATTGCAACTTACTACCTCCGT 57.025 42.857 0.00 0.00 0.00 4.69
5198 6169 3.308438 TTGCAACTTACTACCTCCGTC 57.692 47.619 0.00 0.00 0.00 4.79
5199 6170 1.547372 TGCAACTTACTACCTCCGTCC 59.453 52.381 0.00 0.00 0.00 4.79
5200 6171 1.134877 GCAACTTACTACCTCCGTCCC 60.135 57.143 0.00 0.00 0.00 4.46
5201 6172 1.133790 CAACTTACTACCTCCGTCCCG 59.866 57.143 0.00 0.00 0.00 5.14
5202 6173 0.329596 ACTTACTACCTCCGTCCCGT 59.670 55.000 0.00 0.00 0.00 5.28
5203 6174 1.559682 ACTTACTACCTCCGTCCCGTA 59.440 52.381 0.00 0.00 0.00 4.02
5204 6175 2.026262 ACTTACTACCTCCGTCCCGTAA 60.026 50.000 0.00 0.00 0.00 3.18
5205 6176 3.217626 CTTACTACCTCCGTCCCGTAAT 58.782 50.000 0.00 0.00 0.00 1.89
5206 6177 4.141482 ACTTACTACCTCCGTCCCGTAATA 60.141 45.833 0.00 0.00 0.00 0.98
5207 6178 3.515602 ACTACCTCCGTCCCGTAATAT 57.484 47.619 0.00 0.00 0.00 1.28
5208 6179 4.640771 ACTACCTCCGTCCCGTAATATA 57.359 45.455 0.00 0.00 0.00 0.86
5209 6180 4.985538 ACTACCTCCGTCCCGTAATATAA 58.014 43.478 0.00 0.00 0.00 0.98
5210 6181 5.006386 ACTACCTCCGTCCCGTAATATAAG 58.994 45.833 0.00 0.00 0.00 1.73
5211 6182 4.104383 ACCTCCGTCCCGTAATATAAGA 57.896 45.455 0.00 0.00 0.00 2.10
5212 6183 4.473444 ACCTCCGTCCCGTAATATAAGAA 58.527 43.478 0.00 0.00 0.00 2.52
5213 6184 4.279420 ACCTCCGTCCCGTAATATAAGAAC 59.721 45.833 0.00 0.00 0.00 3.01
5214 6185 4.470462 CTCCGTCCCGTAATATAAGAACG 58.530 47.826 0.00 0.00 36.42 3.95
5215 6186 4.133820 TCCGTCCCGTAATATAAGAACGA 58.866 43.478 0.00 0.00 38.89 3.85
5216 6187 4.761739 TCCGTCCCGTAATATAAGAACGAT 59.238 41.667 0.00 0.00 38.89 3.73
5217 6188 5.241506 TCCGTCCCGTAATATAAGAACGATT 59.758 40.000 0.00 0.00 38.89 3.34
5218 6189 5.922544 CCGTCCCGTAATATAAGAACGATTT 59.077 40.000 0.00 0.00 38.89 2.17
5219 6190 6.421801 CCGTCCCGTAATATAAGAACGATTTT 59.578 38.462 0.00 0.00 38.89 1.82
5220 6191 7.278629 CGTCCCGTAATATAAGAACGATTTTG 58.721 38.462 0.00 0.00 38.89 2.44
5221 6192 7.167968 CGTCCCGTAATATAAGAACGATTTTGA 59.832 37.037 0.00 0.00 38.89 2.69
5222 6193 8.985805 GTCCCGTAATATAAGAACGATTTTGAT 58.014 33.333 0.00 0.00 38.89 2.57
5234 6205 8.912787 AGAACGATTTTGATACTACACTAGTG 57.087 34.615 21.44 21.44 39.81 2.74
5235 6206 8.521176 AGAACGATTTTGATACTACACTAGTGT 58.479 33.333 30.13 30.13 46.87 3.55
5236 6207 8.684973 AACGATTTTGATACTACACTAGTGTC 57.315 34.615 31.11 17.07 44.30 3.67
5243 6214 6.889019 GATACTACACTAGTGTCAAAAGCC 57.111 41.667 31.11 12.14 43.73 4.35
5244 6215 4.957684 ACTACACTAGTGTCAAAAGCCT 57.042 40.909 31.11 6.93 43.74 4.58
5245 6216 4.884247 ACTACACTAGTGTCAAAAGCCTC 58.116 43.478 31.11 0.00 43.74 4.70
5246 6217 2.755650 ACACTAGTGTCAAAAGCCTCG 58.244 47.619 22.95 0.00 40.24 4.63
5247 6218 2.102588 ACACTAGTGTCAAAAGCCTCGT 59.897 45.455 22.95 0.00 40.24 4.18
5248 6219 3.319972 ACACTAGTGTCAAAAGCCTCGTA 59.680 43.478 22.95 0.00 40.24 3.43
5249 6220 4.202182 ACACTAGTGTCAAAAGCCTCGTAA 60.202 41.667 22.95 0.00 40.24 3.18
5250 6221 4.929808 CACTAGTGTCAAAAGCCTCGTAAT 59.070 41.667 15.06 0.00 0.00 1.89
5251 6222 6.097356 CACTAGTGTCAAAAGCCTCGTAATA 58.903 40.000 15.06 0.00 0.00 0.98
5252 6223 6.757010 CACTAGTGTCAAAAGCCTCGTAATAT 59.243 38.462 15.06 0.00 0.00 1.28
5253 6224 7.919091 CACTAGTGTCAAAAGCCTCGTAATATA 59.081 37.037 15.06 0.00 0.00 0.86
5254 6225 8.472413 ACTAGTGTCAAAAGCCTCGTAATATAA 58.528 33.333 0.00 0.00 0.00 0.98
5255 6226 7.772332 AGTGTCAAAAGCCTCGTAATATAAG 57.228 36.000 0.00 0.00 0.00 1.73
5256 6227 7.553334 AGTGTCAAAAGCCTCGTAATATAAGA 58.447 34.615 0.00 0.00 0.00 2.10
5257 6228 8.038944 AGTGTCAAAAGCCTCGTAATATAAGAA 58.961 33.333 0.00 0.00 0.00 2.52
5258 6229 8.114905 GTGTCAAAAGCCTCGTAATATAAGAAC 58.885 37.037 0.00 0.00 0.00 3.01
5259 6230 7.009815 TGTCAAAAGCCTCGTAATATAAGAACG 59.990 37.037 0.00 0.00 37.96 3.95
5260 6231 7.009907 GTCAAAAGCCTCGTAATATAAGAACGT 59.990 37.037 5.22 0.00 37.83 3.99
5261 6232 7.546667 TCAAAAGCCTCGTAATATAAGAACGTT 59.453 33.333 0.00 0.00 37.83 3.99
5262 6233 7.838771 AAAGCCTCGTAATATAAGAACGTTT 57.161 32.000 0.46 0.00 37.83 3.60
5263 6234 7.838771 AAGCCTCGTAATATAAGAACGTTTT 57.161 32.000 0.46 0.00 37.83 2.43
5264 6235 7.838771 AGCCTCGTAATATAAGAACGTTTTT 57.161 32.000 9.22 9.22 37.83 1.94
5265 6236 7.681903 AGCCTCGTAATATAAGAACGTTTTTG 58.318 34.615 13.87 0.00 37.83 2.44
5266 6237 7.546667 AGCCTCGTAATATAAGAACGTTTTTGA 59.453 33.333 13.87 2.81 37.83 2.69
5267 6238 8.333186 GCCTCGTAATATAAGAACGTTTTTGAT 58.667 33.333 13.87 4.93 37.83 2.57
5280 6251 9.485206 AGAACGTTTTTGATACTACATTAGTGT 57.515 29.630 0.46 0.00 39.81 3.55
5281 6252 9.737025 GAACGTTTTTGATACTACATTAGTGTC 57.263 33.333 0.46 3.78 44.30 3.67
5289 6260 7.521509 GATACTACATTAGTGTCAAAAGCGT 57.478 36.000 0.00 0.00 43.73 5.07
5290 6261 7.900782 ATACTACATTAGTGTCAAAAGCGTT 57.099 32.000 0.00 0.00 39.81 4.84
5291 6262 6.224420 ACTACATTAGTGTCAAAAGCGTTC 57.776 37.500 0.00 0.00 39.77 3.95
5292 6263 5.989777 ACTACATTAGTGTCAAAAGCGTTCT 59.010 36.000 0.00 0.00 39.77 3.01
5293 6264 5.751243 ACATTAGTGTCAAAAGCGTTCTT 57.249 34.783 0.00 0.00 31.41 2.52
5294 6265 6.854496 ACATTAGTGTCAAAAGCGTTCTTA 57.146 33.333 0.00 0.00 31.41 2.10
5295 6266 7.435068 ACATTAGTGTCAAAAGCGTTCTTAT 57.565 32.000 0.00 0.00 31.41 1.73
5296 6267 8.542497 ACATTAGTGTCAAAAGCGTTCTTATA 57.458 30.769 0.00 0.00 31.41 0.98
5297 6268 9.162764 ACATTAGTGTCAAAAGCGTTCTTATAT 57.837 29.630 0.00 0.00 31.41 0.86
5298 6269 9.988350 CATTAGTGTCAAAAGCGTTCTTATATT 57.012 29.630 0.00 0.00 31.02 1.28
5302 6273 9.378551 AGTGTCAAAAGCGTTCTTATATTATGA 57.621 29.630 0.00 0.00 31.02 2.15
5303 6274 9.638300 GTGTCAAAAGCGTTCTTATATTATGAG 57.362 33.333 0.00 0.00 31.02 2.90
5304 6275 9.594478 TGTCAAAAGCGTTCTTATATTATGAGA 57.406 29.630 0.00 0.00 31.02 3.27
5305 6276 9.851043 GTCAAAAGCGTTCTTATATTATGAGAC 57.149 33.333 0.00 0.00 31.02 3.36
5306 6277 8.752254 TCAAAAGCGTTCTTATATTATGAGACG 58.248 33.333 12.06 12.06 31.02 4.18
5307 6278 7.639162 AAAGCGTTCTTATATTATGAGACGG 57.361 36.000 15.32 6.59 31.02 4.79
5308 6279 6.570672 AGCGTTCTTATATTATGAGACGGA 57.429 37.500 15.32 0.00 0.00 4.69
5309 6280 6.613233 AGCGTTCTTATATTATGAGACGGAG 58.387 40.000 15.32 4.69 0.00 4.63
5310 6281 5.800941 GCGTTCTTATATTATGAGACGGAGG 59.199 44.000 15.32 4.53 0.00 4.30
5311 6282 6.323266 CGTTCTTATATTATGAGACGGAGGG 58.677 44.000 0.00 0.00 0.00 4.30
5312 6283 6.150641 CGTTCTTATATTATGAGACGGAGGGA 59.849 42.308 0.00 0.00 0.00 4.20
5313 6284 7.540299 GTTCTTATATTATGAGACGGAGGGAG 58.460 42.308 0.00 0.00 0.00 4.30
5314 6285 6.791371 TCTTATATTATGAGACGGAGGGAGT 58.209 40.000 0.00 0.00 0.00 3.85
5315 6286 7.925622 TCTTATATTATGAGACGGAGGGAGTA 58.074 38.462 0.00 0.00 0.00 2.59
5316 6287 7.828223 TCTTATATTATGAGACGGAGGGAGTAC 59.172 40.741 0.00 0.00 0.00 2.73
5317 6288 3.947612 TTATGAGACGGAGGGAGTACT 57.052 47.619 0.00 0.00 0.00 2.73
5318 6289 5.579753 ATTATGAGACGGAGGGAGTACTA 57.420 43.478 0.00 0.00 0.00 1.82
5319 6290 2.706339 TGAGACGGAGGGAGTACTAC 57.294 55.000 0.00 0.00 0.00 2.73
5320 6291 1.911357 TGAGACGGAGGGAGTACTACA 59.089 52.381 7.57 0.00 0.00 2.74
5321 6292 2.508716 TGAGACGGAGGGAGTACTACAT 59.491 50.000 7.57 0.00 0.00 2.29
5322 6293 3.053842 TGAGACGGAGGGAGTACTACATT 60.054 47.826 7.57 0.00 0.00 2.71
5373 6344 2.611800 TGTGCCCTGATGCCCTCT 60.612 61.111 0.00 0.00 0.00 3.69
5374 6345 1.306911 TGTGCCCTGATGCCCTCTA 60.307 57.895 0.00 0.00 0.00 2.43
5375 6346 0.695462 TGTGCCCTGATGCCCTCTAT 60.695 55.000 0.00 0.00 0.00 1.98
5386 6357 1.694150 TGCCCTCTATATGTCTGGTGC 59.306 52.381 0.00 0.00 0.00 5.01
5420 6391 3.719924 CATGGTTGTGAACTTGCATTGT 58.280 40.909 0.00 0.00 0.00 2.71
5435 6406 5.590530 TGCATTGTTGTAACCTTGTTTCT 57.409 34.783 0.00 0.00 0.00 2.52
5436 6407 6.701145 TGCATTGTTGTAACCTTGTTTCTA 57.299 33.333 0.00 0.00 0.00 2.10
5474 6445 6.429624 TGACTTTTCGATGAAATGAACACTG 58.570 36.000 10.87 0.00 33.08 3.66
5502 6475 3.120199 CCTTTTCCTACGTGCATCTGTTG 60.120 47.826 0.00 0.00 0.00 3.33
5503 6476 2.831685 TTCCTACGTGCATCTGTTGT 57.168 45.000 0.00 0.00 0.00 3.32
5581 6554 8.285776 AGAACATGCTTTATTTTGAAGTTTCG 57.714 30.769 0.00 0.00 0.00 3.46
5649 6622 1.923148 CTTTCTTCCCACCACCCCTAT 59.077 52.381 0.00 0.00 0.00 2.57
5669 6648 3.417069 TGTCCAACCTTCCATGTAGTG 57.583 47.619 0.00 0.00 0.00 2.74
5673 6652 5.722441 TGTCCAACCTTCCATGTAGTGTATA 59.278 40.000 0.00 0.00 0.00 1.47
5706 6685 9.975218 AATCACCTTAATTTACATACCTTCTGT 57.025 29.630 0.00 0.00 0.00 3.41
5709 6688 9.886132 CACCTTAATTTACATACCTTCTGTACT 57.114 33.333 0.00 0.00 30.62 2.73
5724 6703 8.960591 ACCTTCTGTACTGATTCCATTTTAATG 58.039 33.333 3.03 0.00 36.17 1.90
5871 6875 3.837908 TTGCAACGCACGGGCATTG 62.838 57.895 15.24 15.24 45.48 2.82
5877 6881 0.604243 ACGCACGGGCATTGTTCTAA 60.604 50.000 11.77 0.00 41.24 2.10
5981 6986 4.704833 GCACGCTCAGGCCTTCCA 62.705 66.667 0.00 0.00 34.44 3.53
6048 7055 7.945033 TTTTTGAATAGTTTGGATTGCTCAC 57.055 32.000 0.00 0.00 0.00 3.51
6049 7056 5.643379 TTGAATAGTTTGGATTGCTCACC 57.357 39.130 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 1.808945 CTCAGGCACAACATTCTCACC 59.191 52.381 0.00 0.00 0.00 4.02
7 8 1.198637 GCTCAGGCACAACATTCTCAC 59.801 52.381 0.00 0.00 38.54 3.51
8 9 1.202794 TGCTCAGGCACAACATTCTCA 60.203 47.619 0.00 0.00 44.28 3.27
9 10 1.527034 TGCTCAGGCACAACATTCTC 58.473 50.000 0.00 0.00 44.28 2.87
10 11 3.731716 TGCTCAGGCACAACATTCT 57.268 47.368 0.00 0.00 44.28 2.40
20 21 3.210528 GCTGCTCCATGCTCAGGC 61.211 66.667 0.00 0.00 43.37 4.85
21 22 2.895865 CGCTGCTCCATGCTCAGG 60.896 66.667 0.00 0.00 43.37 3.86
22 23 2.895865 CCGCTGCTCCATGCTCAG 60.896 66.667 0.00 0.00 43.37 3.35
25 26 4.728110 TTGCCGCTGCTCCATGCT 62.728 61.111 0.70 0.00 43.37 3.79
26 27 3.524606 ATTGCCGCTGCTCCATGC 61.525 61.111 0.70 0.00 43.25 4.06
27 28 1.940883 AACATTGCCGCTGCTCCATG 61.941 55.000 0.70 4.10 38.71 3.66
28 29 1.252904 AAACATTGCCGCTGCTCCAT 61.253 50.000 0.70 0.00 38.71 3.41
29 30 1.902918 AAACATTGCCGCTGCTCCA 60.903 52.632 0.70 0.00 38.71 3.86
30 31 1.444895 CAAACATTGCCGCTGCTCC 60.445 57.895 0.70 0.00 38.71 4.70
31 32 0.039256 TTCAAACATTGCCGCTGCTC 60.039 50.000 0.70 0.00 38.71 4.26
32 33 0.318955 GTTCAAACATTGCCGCTGCT 60.319 50.000 0.70 0.00 38.71 4.24
33 34 0.597118 TGTTCAAACATTGCCGCTGC 60.597 50.000 0.00 0.00 33.17 5.25
34 35 1.269206 ACTGTTCAAACATTGCCGCTG 60.269 47.619 0.00 0.00 38.41 5.18
35 36 1.032014 ACTGTTCAAACATTGCCGCT 58.968 45.000 0.00 0.00 38.41 5.52
36 37 1.786579 GAACTGTTCAAACATTGCCGC 59.213 47.619 15.34 0.00 38.41 6.53
37 38 2.788786 GTGAACTGTTCAAACATTGCCG 59.211 45.455 23.55 0.00 42.15 5.69
38 39 3.123050 GGTGAACTGTTCAAACATTGCC 58.877 45.455 23.55 14.94 42.15 4.52
39 40 3.123050 GGGTGAACTGTTCAAACATTGC 58.877 45.455 23.55 10.11 42.15 3.56
40 41 4.142182 ACTGGGTGAACTGTTCAAACATTG 60.142 41.667 23.55 15.62 42.15 2.82
41 42 4.023291 ACTGGGTGAACTGTTCAAACATT 58.977 39.130 23.55 15.96 42.15 2.71
42 43 3.631250 ACTGGGTGAACTGTTCAAACAT 58.369 40.909 23.55 12.40 42.15 2.71
43 44 3.080300 ACTGGGTGAACTGTTCAAACA 57.920 42.857 23.55 21.60 42.15 2.83
44 45 4.082463 TGAAACTGGGTGAACTGTTCAAAC 60.082 41.667 23.55 18.64 42.15 2.93
45 46 4.082845 TGAAACTGGGTGAACTGTTCAAA 58.917 39.130 23.55 12.06 42.15 2.69
46 47 3.691575 TGAAACTGGGTGAACTGTTCAA 58.308 40.909 23.55 8.80 42.15 2.69
47 48 3.358111 TGAAACTGGGTGAACTGTTCA 57.642 42.857 18.69 18.69 37.33 3.18
48 49 3.882888 TGATGAAACTGGGTGAACTGTTC 59.117 43.478 13.49 13.49 32.36 3.18
49 50 3.897239 TGATGAAACTGGGTGAACTGTT 58.103 40.909 0.00 0.00 34.55 3.16
50 51 3.576078 TGATGAAACTGGGTGAACTGT 57.424 42.857 0.00 0.00 0.00 3.55
51 52 4.074259 TCATGATGAAACTGGGTGAACTG 58.926 43.478 0.00 0.00 0.00 3.16
52 53 4.074970 GTCATGATGAAACTGGGTGAACT 58.925 43.478 0.00 0.00 0.00 3.01
53 54 3.820467 TGTCATGATGAAACTGGGTGAAC 59.180 43.478 0.00 0.00 0.00 3.18
54 55 3.820467 GTGTCATGATGAAACTGGGTGAA 59.180 43.478 8.49 0.00 31.92 3.18
55 56 3.411446 GTGTCATGATGAAACTGGGTGA 58.589 45.455 8.49 0.00 31.92 4.02
56 57 2.160219 CGTGTCATGATGAAACTGGGTG 59.840 50.000 13.46 0.00 32.45 4.61
57 58 2.426522 CGTGTCATGATGAAACTGGGT 58.573 47.619 13.46 0.00 32.45 4.51
58 59 1.131126 GCGTGTCATGATGAAACTGGG 59.869 52.381 13.46 0.10 32.45 4.45
59 60 1.201954 CGCGTGTCATGATGAAACTGG 60.202 52.381 13.46 1.95 32.45 4.00
60 61 1.460743 ACGCGTGTCATGATGAAACTG 59.539 47.619 12.93 8.39 32.45 3.16
61 62 1.460743 CACGCGTGTCATGATGAAACT 59.539 47.619 30.50 0.00 32.45 2.66
62 63 1.459209 TCACGCGTGTCATGATGAAAC 59.541 47.619 35.74 5.66 31.28 2.78
63 64 1.789506 TCACGCGTGTCATGATGAAA 58.210 45.000 35.74 12.39 0.00 2.69
64 65 2.008752 ATCACGCGTGTCATGATGAA 57.991 45.000 35.74 16.09 31.84 2.57
65 66 1.660104 CAATCACGCGTGTCATGATGA 59.340 47.619 35.74 16.84 33.37 2.92
66 67 1.267682 CCAATCACGCGTGTCATGATG 60.268 52.381 35.74 23.93 33.37 3.07
67 68 1.009078 CCAATCACGCGTGTCATGAT 58.991 50.000 35.74 20.54 34.52 2.45
68 69 0.037790 TCCAATCACGCGTGTCATGA 60.038 50.000 35.74 24.70 0.00 3.07
69 70 0.795698 TTCCAATCACGCGTGTCATG 59.204 50.000 35.74 29.03 0.00 3.07
70 71 1.518325 TTTCCAATCACGCGTGTCAT 58.482 45.000 35.74 22.02 0.00 3.06
71 72 1.003331 GTTTTCCAATCACGCGTGTCA 60.003 47.619 35.74 20.68 0.00 3.58
72 73 1.263217 AGTTTTCCAATCACGCGTGTC 59.737 47.619 35.74 16.30 0.00 3.67
73 74 1.263217 GAGTTTTCCAATCACGCGTGT 59.737 47.619 35.74 21.74 0.00 4.49
74 75 1.262950 TGAGTTTTCCAATCACGCGTG 59.737 47.619 32.76 32.76 0.00 5.34
75 76 1.263217 GTGAGTTTTCCAATCACGCGT 59.737 47.619 5.58 5.58 34.55 6.01
76 77 1.950472 GTGAGTTTTCCAATCACGCG 58.050 50.000 3.53 3.53 34.55 6.01
79 80 2.032799 TGCACGTGAGTTTTCCAATCAC 59.967 45.455 22.23 0.00 46.40 3.06
80 81 2.293170 TGCACGTGAGTTTTCCAATCA 58.707 42.857 22.23 0.00 46.40 2.57
81 82 3.042887 GTTGCACGTGAGTTTTCCAATC 58.957 45.455 22.23 3.68 46.40 2.67
82 83 2.687935 AGTTGCACGTGAGTTTTCCAAT 59.312 40.909 22.23 0.16 46.40 3.16
83 84 2.088423 AGTTGCACGTGAGTTTTCCAA 58.912 42.857 22.23 9.11 46.40 3.53
84 85 1.400142 CAGTTGCACGTGAGTTTTCCA 59.600 47.619 22.23 2.21 46.40 3.53
85 86 1.859998 GCAGTTGCACGTGAGTTTTCC 60.860 52.381 22.23 0.00 46.40 3.13
86 87 1.466855 GCAGTTGCACGTGAGTTTTC 58.533 50.000 22.23 0.00 46.40 2.29
87 88 3.622459 GCAGTTGCACGTGAGTTTT 57.378 47.368 22.23 0.00 46.40 2.43
98 99 6.230849 TCAATCAAATCATTTTGCAGTTGC 57.769 33.333 0.00 0.00 41.66 4.17
99 100 6.073494 TGCTCAATCAAATCATTTTGCAGTTG 60.073 34.615 0.00 0.00 41.66 3.16
100 101 5.992829 TGCTCAATCAAATCATTTTGCAGTT 59.007 32.000 0.00 0.00 41.66 3.16
101 102 5.543714 TGCTCAATCAAATCATTTTGCAGT 58.456 33.333 0.00 0.00 41.66 4.40
102 103 6.662414 ATGCTCAATCAAATCATTTTGCAG 57.338 33.333 0.00 0.00 41.66 4.41
103 104 7.766738 ACATATGCTCAATCAAATCATTTTGCA 59.233 29.630 1.58 0.00 41.66 4.08
104 105 8.061857 CACATATGCTCAATCAAATCATTTTGC 58.938 33.333 1.58 0.00 41.66 3.68
105 106 8.547894 CCACATATGCTCAATCAAATCATTTTG 58.452 33.333 1.58 0.00 42.98 2.44
106 107 7.713507 CCCACATATGCTCAATCAAATCATTTT 59.286 33.333 1.58 0.00 0.00 1.82
107 108 7.214381 CCCACATATGCTCAATCAAATCATTT 58.786 34.615 1.58 0.00 0.00 2.32
108 109 6.740401 GCCCACATATGCTCAATCAAATCATT 60.740 38.462 1.58 0.00 0.00 2.57
109 110 5.279306 GCCCACATATGCTCAATCAAATCAT 60.279 40.000 1.58 0.00 0.00 2.45
110 111 4.038282 GCCCACATATGCTCAATCAAATCA 59.962 41.667 1.58 0.00 0.00 2.57
111 112 4.280174 AGCCCACATATGCTCAATCAAATC 59.720 41.667 1.58 0.00 30.33 2.17
112 113 4.220724 AGCCCACATATGCTCAATCAAAT 58.779 39.130 1.58 0.00 30.33 2.32
113 114 3.634504 AGCCCACATATGCTCAATCAAA 58.365 40.909 1.58 0.00 30.33 2.69
114 115 3.301794 AGCCCACATATGCTCAATCAA 57.698 42.857 1.58 0.00 30.33 2.57
121 122 2.304092 CAACATGAGCCCACATATGCT 58.696 47.619 1.58 0.00 41.42 3.79
122 123 1.338973 CCAACATGAGCCCACATATGC 59.661 52.381 1.58 0.00 0.00 3.14
123 124 1.338973 GCCAACATGAGCCCACATATG 59.661 52.381 0.00 0.00 0.00 1.78
124 125 1.063792 TGCCAACATGAGCCCACATAT 60.064 47.619 0.00 0.00 0.00 1.78
125 126 0.330941 TGCCAACATGAGCCCACATA 59.669 50.000 0.00 0.00 0.00 2.29
126 127 0.542467 TTGCCAACATGAGCCCACAT 60.542 50.000 0.00 0.00 0.00 3.21
127 128 1.152589 TTGCCAACATGAGCCCACA 60.153 52.632 0.00 0.00 0.00 4.17
128 129 1.290009 GTTGCCAACATGAGCCCAC 59.710 57.895 1.91 0.00 0.00 4.61
129 130 1.907807 GGTTGCCAACATGAGCCCA 60.908 57.895 10.18 0.00 0.00 5.36
130 131 1.470996 TTGGTTGCCAACATGAGCCC 61.471 55.000 10.18 0.00 38.75 5.19
131 132 0.609662 ATTGGTTGCCAACATGAGCC 59.390 50.000 10.18 0.00 46.95 4.70
132 133 2.754552 TCTATTGGTTGCCAACATGAGC 59.245 45.455 10.18 0.00 46.95 4.26
133 134 4.400251 ACATCTATTGGTTGCCAACATGAG 59.600 41.667 10.18 1.21 46.95 2.90
134 135 4.343231 ACATCTATTGGTTGCCAACATGA 58.657 39.130 10.18 10.44 46.95 3.07
135 136 4.724074 ACATCTATTGGTTGCCAACATG 57.276 40.909 10.18 5.90 46.95 3.21
136 137 6.367983 AGATACATCTATTGGTTGCCAACAT 58.632 36.000 10.18 0.00 46.95 2.71
137 138 5.754782 AGATACATCTATTGGTTGCCAACA 58.245 37.500 10.18 0.00 46.95 3.33
138 139 6.543831 AGAAGATACATCTATTGGTTGCCAAC 59.456 38.462 0.00 0.00 40.42 3.77
139 140 6.662755 AGAAGATACATCTATTGGTTGCCAA 58.337 36.000 2.86 2.86 41.26 4.52
140 141 6.252599 AGAAGATACATCTATTGGTTGCCA 57.747 37.500 0.00 0.00 35.76 4.92
141 142 7.573968 AAAGAAGATACATCTATTGGTTGCC 57.426 36.000 0.00 0.00 35.76 4.52
145 146 9.712305 CCGAATAAAGAAGATACATCTATTGGT 57.288 33.333 0.00 0.00 35.76 3.67
146 147 9.712305 ACCGAATAAAGAAGATACATCTATTGG 57.288 33.333 0.00 0.00 35.76 3.16
150 151 9.042008 GCAAACCGAATAAAGAAGATACATCTA 57.958 33.333 0.00 0.00 35.76 1.98
151 152 7.552687 TGCAAACCGAATAAAGAAGATACATCT 59.447 33.333 0.00 0.00 39.22 2.90
152 153 7.693952 TGCAAACCGAATAAAGAAGATACATC 58.306 34.615 0.00 0.00 0.00 3.06
153 154 7.624360 TGCAAACCGAATAAAGAAGATACAT 57.376 32.000 0.00 0.00 0.00 2.29
154 155 7.441890 TTGCAAACCGAATAAAGAAGATACA 57.558 32.000 0.00 0.00 0.00 2.29
155 156 8.635983 GTTTTGCAAACCGAATAAAGAAGATAC 58.364 33.333 12.39 0.00 0.00 2.24
156 157 8.573035 AGTTTTGCAAACCGAATAAAGAAGATA 58.427 29.630 12.39 0.00 0.00 1.98
157 158 7.433680 AGTTTTGCAAACCGAATAAAGAAGAT 58.566 30.769 12.39 0.00 0.00 2.40
158 159 6.801575 AGTTTTGCAAACCGAATAAAGAAGA 58.198 32.000 12.39 0.00 0.00 2.87
159 160 8.638565 CATAGTTTTGCAAACCGAATAAAGAAG 58.361 33.333 12.39 0.00 0.00 2.85
160 161 8.138712 ACATAGTTTTGCAAACCGAATAAAGAA 58.861 29.630 12.39 0.00 0.00 2.52
161 162 7.593273 CACATAGTTTTGCAAACCGAATAAAGA 59.407 33.333 12.39 0.00 0.00 2.52
162 163 7.593273 TCACATAGTTTTGCAAACCGAATAAAG 59.407 33.333 12.39 1.94 0.00 1.85
163 164 7.426410 TCACATAGTTTTGCAAACCGAATAAA 58.574 30.769 12.39 0.00 0.00 1.40
164 165 6.971602 TCACATAGTTTTGCAAACCGAATAA 58.028 32.000 12.39 0.00 0.00 1.40
165 166 6.428465 TCTCACATAGTTTTGCAAACCGAATA 59.572 34.615 12.39 1.43 0.00 1.75
166 167 5.240623 TCTCACATAGTTTTGCAAACCGAAT 59.759 36.000 12.39 1.56 0.00 3.34
167 168 4.576873 TCTCACATAGTTTTGCAAACCGAA 59.423 37.500 12.39 0.00 0.00 4.30
168 169 4.024387 GTCTCACATAGTTTTGCAAACCGA 60.024 41.667 12.39 0.82 0.00 4.69
169 170 4.219033 GTCTCACATAGTTTTGCAAACCG 58.781 43.478 12.39 1.31 0.00 4.44
170 171 5.181690 TGTCTCACATAGTTTTGCAAACC 57.818 39.130 12.39 4.67 0.00 3.27
171 172 7.698836 AAATGTCTCACATAGTTTTGCAAAC 57.301 32.000 12.39 7.48 37.97 2.93
172 173 8.715191 AAAAATGTCTCACATAGTTTTGCAAA 57.285 26.923 8.05 8.05 37.97 3.68
173 174 9.243637 GTAAAAATGTCTCACATAGTTTTGCAA 57.756 29.630 0.00 0.00 37.97 4.08
174 175 8.629158 AGTAAAAATGTCTCACATAGTTTTGCA 58.371 29.630 12.87 0.00 37.97 4.08
175 176 9.463443 AAGTAAAAATGTCTCACATAGTTTTGC 57.537 29.630 8.38 7.45 37.97 3.68
183 184 9.840427 CCGAATAAAAGTAAAAATGTCTCACAT 57.160 29.630 0.00 0.00 41.31 3.21
184 185 9.058174 TCCGAATAAAAGTAAAAATGTCTCACA 57.942 29.630 0.00 0.00 0.00 3.58
188 189 9.353999 GCAATCCGAATAAAAGTAAAAATGTCT 57.646 29.630 0.00 0.00 0.00 3.41
189 190 9.134734 TGCAATCCGAATAAAAGTAAAAATGTC 57.865 29.630 0.00 0.00 0.00 3.06
190 191 9.482627 TTGCAATCCGAATAAAAGTAAAAATGT 57.517 25.926 0.00 0.00 0.00 2.71
194 195 9.535878 AGTTTTGCAATCCGAATAAAAGTAAAA 57.464 25.926 0.00 0.00 0.00 1.52
197 198 9.781834 CATAGTTTTGCAATCCGAATAAAAGTA 57.218 29.630 0.00 0.00 33.35 2.24
198 199 7.275560 GCATAGTTTTGCAATCCGAATAAAAGT 59.724 33.333 0.00 0.00 42.31 2.66
199 200 7.489113 AGCATAGTTTTGCAATCCGAATAAAAG 59.511 33.333 0.00 0.00 45.23 2.27
200 201 7.319646 AGCATAGTTTTGCAATCCGAATAAAA 58.680 30.769 0.00 0.00 45.23 1.52
201 202 6.862209 AGCATAGTTTTGCAATCCGAATAAA 58.138 32.000 0.00 0.00 45.23 1.40
202 203 6.449635 AGCATAGTTTTGCAATCCGAATAA 57.550 33.333 0.00 0.00 45.23 1.40
203 204 7.744087 ATAGCATAGTTTTGCAATCCGAATA 57.256 32.000 0.00 0.00 45.23 1.75
204 205 4.989279 AGCATAGTTTTGCAATCCGAAT 57.011 36.364 0.00 0.00 45.23 3.34
205 206 6.449635 AATAGCATAGTTTTGCAATCCGAA 57.550 33.333 0.00 0.00 45.23 4.30
206 207 6.449635 AAATAGCATAGTTTTGCAATCCGA 57.550 33.333 0.00 0.00 45.23 4.55
207 208 8.801715 ATAAAATAGCATAGTTTTGCAATCCG 57.198 30.769 0.00 0.00 45.23 4.18
210 211 9.801873 ACGAATAAAATAGCATAGTTTTGCAAT 57.198 25.926 0.00 0.00 45.23 3.56
211 212 9.632807 AACGAATAAAATAGCATAGTTTTGCAA 57.367 25.926 0.00 0.00 45.23 4.08
212 213 9.632807 AAACGAATAAAATAGCATAGTTTTGCA 57.367 25.926 0.00 0.00 45.23 4.08
213 214 9.885743 CAAACGAATAAAATAGCATAGTTTTGC 57.114 29.630 0.00 0.00 34.96 3.68
254 255 9.357652 GACACACAACTTTTGCATTCAATATAT 57.642 29.630 0.00 0.00 31.33 0.86
255 256 8.355913 TGACACACAACTTTTGCATTCAATATA 58.644 29.630 0.00 0.00 31.33 0.86
256 257 7.208777 TGACACACAACTTTTGCATTCAATAT 58.791 30.769 0.00 0.00 31.33 1.28
257 258 6.567959 TGACACACAACTTTTGCATTCAATA 58.432 32.000 0.00 0.00 31.33 1.90
258 259 5.417811 TGACACACAACTTTTGCATTCAAT 58.582 33.333 0.00 0.00 31.33 2.57
259 260 4.814147 TGACACACAACTTTTGCATTCAA 58.186 34.783 0.00 0.00 0.00 2.69
260 261 4.446994 TGACACACAACTTTTGCATTCA 57.553 36.364 0.00 0.00 0.00 2.57
261 262 5.119898 TGTTTGACACACAACTTTTGCATTC 59.880 36.000 0.00 0.00 38.29 2.67
262 263 4.993584 TGTTTGACACACAACTTTTGCATT 59.006 33.333 0.00 0.00 38.29 3.56
263 264 4.564041 TGTTTGACACACAACTTTTGCAT 58.436 34.783 0.00 0.00 38.29 3.96
264 265 3.982475 TGTTTGACACACAACTTTTGCA 58.018 36.364 0.00 0.00 38.29 4.08
265 266 4.981389 TTGTTTGACACACAACTTTTGC 57.019 36.364 3.03 0.00 38.29 3.68
266 267 5.107182 TGCATTGTTTGACACACAACTTTTG 60.107 36.000 9.26 5.56 36.97 2.44
267 268 4.993584 TGCATTGTTTGACACACAACTTTT 59.006 33.333 9.26 0.00 36.97 2.27
268 269 4.564041 TGCATTGTTTGACACACAACTTT 58.436 34.783 9.26 0.00 36.97 2.66
269 270 4.185467 TGCATTGTTTGACACACAACTT 57.815 36.364 9.26 0.00 36.97 2.66
270 271 3.865011 TGCATTGTTTGACACACAACT 57.135 38.095 9.26 0.00 36.97 3.16
271 272 4.917887 TTTGCATTGTTTGACACACAAC 57.082 36.364 9.26 0.00 36.97 3.32
272 273 5.929697 TTTTTGCATTGTTTGACACACAA 57.070 30.435 9.48 9.48 38.49 3.33
295 296 8.197439 GCTGCCCTATTTCAACAAATAGTTTAT 58.803 33.333 11.66 0.00 45.64 1.40
296 297 7.363443 GGCTGCCCTATTTCAACAAATAGTTTA 60.363 37.037 7.66 0.52 45.64 2.01
297 298 6.398095 GCTGCCCTATTTCAACAAATAGTTT 58.602 36.000 11.66 0.00 45.64 2.66
298 299 5.105351 GGCTGCCCTATTTCAACAAATAGTT 60.105 40.000 7.66 0.00 45.64 2.24
299 300 4.402474 GGCTGCCCTATTTCAACAAATAGT 59.598 41.667 7.66 0.00 45.64 2.12
300 301 4.402155 TGGCTGCCCTATTTCAACAAATAG 59.598 41.667 17.53 7.30 46.24 1.73
301 302 4.348486 TGGCTGCCCTATTTCAACAAATA 58.652 39.130 17.53 0.00 33.95 1.40
302 303 3.172339 TGGCTGCCCTATTTCAACAAAT 58.828 40.909 17.53 0.00 36.18 2.32
303 304 2.562298 CTGGCTGCCCTATTTCAACAAA 59.438 45.455 17.53 0.00 0.00 2.83
304 305 2.170166 CTGGCTGCCCTATTTCAACAA 58.830 47.619 17.53 0.00 0.00 2.83
305 306 1.838112 CTGGCTGCCCTATTTCAACA 58.162 50.000 17.53 0.00 0.00 3.33
306 307 0.457443 GCTGGCTGCCCTATTTCAAC 59.543 55.000 17.53 0.00 35.15 3.18
307 308 2.886382 GCTGGCTGCCCTATTTCAA 58.114 52.632 17.53 0.00 35.15 2.69
308 309 4.664062 GCTGGCTGCCCTATTTCA 57.336 55.556 17.53 0.00 35.15 2.69
327 328 2.203015 ATACATGACGGCGTGGCC 60.203 61.111 21.19 3.11 46.75 5.36
328 329 2.534019 CCATACATGACGGCGTGGC 61.534 63.158 21.19 4.04 35.29 5.01
329 330 1.887242 CCCATACATGACGGCGTGG 60.887 63.158 21.19 10.77 35.29 4.94
330 331 1.151777 GACCCATACATGACGGCGTG 61.152 60.000 21.19 9.51 37.07 5.34
331 332 1.143183 GACCCATACATGACGGCGT 59.857 57.895 14.65 14.65 0.00 5.68
332 333 1.949133 CGACCCATACATGACGGCG 60.949 63.158 4.80 4.80 0.00 6.46
333 334 0.874607 GACGACCCATACATGACGGC 60.875 60.000 0.00 0.00 0.00 5.68
334 335 0.594028 CGACGACCCATACATGACGG 60.594 60.000 0.00 0.00 0.00 4.79
335 336 1.206745 GCGACGACCCATACATGACG 61.207 60.000 0.00 0.00 0.00 4.35
336 337 0.179121 TGCGACGACCCATACATGAC 60.179 55.000 0.00 0.00 0.00 3.06
337 338 0.750249 ATGCGACGACCCATACATGA 59.250 50.000 0.00 0.00 0.00 3.07
338 339 1.261354 CAATGCGACGACCCATACATG 59.739 52.381 0.00 0.00 0.00 3.21
339 340 1.581934 CAATGCGACGACCCATACAT 58.418 50.000 0.00 0.00 0.00 2.29
340 341 0.461163 CCAATGCGACGACCCATACA 60.461 55.000 0.00 0.00 0.00 2.29
341 342 1.157870 CCCAATGCGACGACCCATAC 61.158 60.000 0.00 0.00 0.00 2.39
342 343 1.145156 CCCAATGCGACGACCCATA 59.855 57.895 0.00 0.00 0.00 2.74
343 344 2.124736 CCCAATGCGACGACCCAT 60.125 61.111 0.00 0.00 0.00 4.00
361 362 4.160635 GATTTGGTCGGCGGTGCG 62.161 66.667 7.21 0.00 0.00 5.34
362 363 1.022451 TTAGATTTGGTCGGCGGTGC 61.022 55.000 7.21 0.00 0.00 5.01
363 364 1.444836 TTTAGATTTGGTCGGCGGTG 58.555 50.000 7.21 0.00 0.00 4.94
364 365 1.808343 GTTTTAGATTTGGTCGGCGGT 59.192 47.619 7.21 0.00 0.00 5.68
365 366 1.807742 TGTTTTAGATTTGGTCGGCGG 59.192 47.619 7.21 0.00 0.00 6.13
366 367 2.723618 CGTGTTTTAGATTTGGTCGGCG 60.724 50.000 0.00 0.00 0.00 6.46
367 368 2.413634 CCGTGTTTTAGATTTGGTCGGC 60.414 50.000 0.00 0.00 0.00 5.54
368 369 2.413634 GCCGTGTTTTAGATTTGGTCGG 60.414 50.000 0.00 0.00 38.67 4.79
369 370 2.723618 CGCCGTGTTTTAGATTTGGTCG 60.724 50.000 0.00 0.00 0.00 4.79
370 371 2.413634 CCGCCGTGTTTTAGATTTGGTC 60.414 50.000 0.00 0.00 0.00 4.02
371 372 1.538075 CCGCCGTGTTTTAGATTTGGT 59.462 47.619 0.00 0.00 0.00 3.67
372 373 1.807742 TCCGCCGTGTTTTAGATTTGG 59.192 47.619 0.00 0.00 0.00 3.28
373 374 2.723618 CGTCCGCCGTGTTTTAGATTTG 60.724 50.000 0.00 0.00 0.00 2.32
374 375 1.461897 CGTCCGCCGTGTTTTAGATTT 59.538 47.619 0.00 0.00 0.00 2.17
375 376 1.073177 CGTCCGCCGTGTTTTAGATT 58.927 50.000 0.00 0.00 0.00 2.40
376 377 1.356527 GCGTCCGCCGTGTTTTAGAT 61.357 55.000 0.00 0.00 39.32 1.98
377 378 2.023223 GCGTCCGCCGTGTTTTAGA 61.023 57.895 0.00 0.00 39.32 2.10
378 379 2.472934 GCGTCCGCCGTGTTTTAG 59.527 61.111 0.00 0.00 39.32 1.85
404 405 1.020333 TTATTCGTTTGGGTCGGCCG 61.020 55.000 22.12 22.12 34.97 6.13
405 406 1.166989 TTTATTCGTTTGGGTCGGCC 58.833 50.000 0.00 0.00 0.00 6.13
406 407 2.993449 TTTTATTCGTTTGGGTCGGC 57.007 45.000 0.00 0.00 0.00 5.54
423 424 1.915952 CGGTGCTTTTGTCCGTTTTT 58.084 45.000 0.00 0.00 39.51 1.94
424 425 3.633573 CGGTGCTTTTGTCCGTTTT 57.366 47.368 0.00 0.00 39.51 2.43
429 430 3.305110 CAAACATACGGTGCTTTTGTCC 58.695 45.455 0.00 0.00 0.00 4.02
430 431 3.305110 CCAAACATACGGTGCTTTTGTC 58.695 45.455 0.00 0.00 0.00 3.18
431 432 2.035321 CCCAAACATACGGTGCTTTTGT 59.965 45.455 0.00 0.00 0.00 2.83
432 433 2.035321 ACCCAAACATACGGTGCTTTTG 59.965 45.455 0.00 0.00 0.00 2.44
433 434 2.295070 GACCCAAACATACGGTGCTTTT 59.705 45.455 0.00 0.00 0.00 2.27
434 435 1.883926 GACCCAAACATACGGTGCTTT 59.116 47.619 0.00 0.00 0.00 3.51
435 436 1.530323 GACCCAAACATACGGTGCTT 58.470 50.000 0.00 0.00 0.00 3.91
436 437 0.672401 CGACCCAAACATACGGTGCT 60.672 55.000 0.00 0.00 0.00 4.40
437 438 1.791662 CGACCCAAACATACGGTGC 59.208 57.895 0.00 0.00 0.00 5.01
438 439 1.641123 GGCGACCCAAACATACGGTG 61.641 60.000 0.00 0.00 0.00 4.94
439 440 1.376295 GGCGACCCAAACATACGGT 60.376 57.895 0.00 0.00 0.00 4.83
440 441 3.493213 GGCGACCCAAACATACGG 58.507 61.111 0.00 0.00 0.00 4.02
452 453 2.098831 GCAACTCTAACGGGGCGAC 61.099 63.158 0.00 0.00 0.00 5.19
453 454 2.221906 GAGCAACTCTAACGGGGCGA 62.222 60.000 0.00 0.00 0.00 5.54
454 455 1.810030 GAGCAACTCTAACGGGGCG 60.810 63.158 0.00 0.00 0.00 6.13
455 456 0.036294 AAGAGCAACTCTAACGGGGC 60.036 55.000 0.00 0.00 40.28 5.80
456 457 2.232941 TGTAAGAGCAACTCTAACGGGG 59.767 50.000 0.00 0.00 40.28 5.73
457 458 3.587797 TGTAAGAGCAACTCTAACGGG 57.412 47.619 0.00 0.00 40.28 5.28
458 459 6.481954 AAAATGTAAGAGCAACTCTAACGG 57.518 37.500 0.00 0.00 40.28 4.44
459 460 7.797819 AGAAAAATGTAAGAGCAACTCTAACG 58.202 34.615 0.00 0.00 40.28 3.18
463 464 8.951243 GGAATAGAAAAATGTAAGAGCAACTCT 58.049 33.333 0.00 0.00 43.37 3.24
464 465 8.951243 AGGAATAGAAAAATGTAAGAGCAACTC 58.049 33.333 0.00 0.00 0.00 3.01
465 466 8.870075 AGGAATAGAAAAATGTAAGAGCAACT 57.130 30.769 0.00 0.00 0.00 3.16
466 467 9.914131 AAAGGAATAGAAAAATGTAAGAGCAAC 57.086 29.630 0.00 0.00 0.00 4.17
467 468 9.912634 CAAAGGAATAGAAAAATGTAAGAGCAA 57.087 29.630 0.00 0.00 0.00 3.91
468 469 9.295825 TCAAAGGAATAGAAAAATGTAAGAGCA 57.704 29.630 0.00 0.00 0.00 4.26
500 501 3.181506 GGCTCATTCGGTTCACAGAATTC 60.182 47.826 0.00 0.00 38.41 2.17
524 525 2.538037 GTGAAACACAAACGCCATTTCC 59.462 45.455 0.00 0.00 36.32 3.13
532 533 6.599637 TTTTAACTTCGTGAAACACAAACG 57.400 33.333 0.00 0.00 35.74 3.60
943 964 2.160205 GCGAAGGGTTTTTAAGGAGCT 58.840 47.619 0.00 0.00 0.00 4.09
951 972 0.688087 TTGGTGGGCGAAGGGTTTTT 60.688 50.000 0.00 0.00 0.00 1.94
1440 1473 2.433318 AAGAAGACGCCGAGCTGC 60.433 61.111 0.00 0.00 0.00 5.25
1509 1542 2.049802 CAAAAGGCGTGGCAGCTG 60.050 61.111 10.11 10.11 37.29 4.24
1538 1583 3.365472 ACAGAACAGAAAAAGGCAACCT 58.635 40.909 0.00 0.00 33.87 3.50
1539 1584 3.801114 ACAGAACAGAAAAAGGCAACC 57.199 42.857 0.00 0.00 37.17 3.77
1540 1585 3.306973 GCAACAGAACAGAAAAAGGCAAC 59.693 43.478 0.00 0.00 0.00 4.17
1541 1586 3.520569 GCAACAGAACAGAAAAAGGCAA 58.479 40.909 0.00 0.00 0.00 4.52
1542 1587 2.479389 CGCAACAGAACAGAAAAAGGCA 60.479 45.455 0.00 0.00 0.00 4.75
1543 1588 2.119457 CGCAACAGAACAGAAAAAGGC 58.881 47.619 0.00 0.00 0.00 4.35
1544 1589 3.363178 GACGCAACAGAACAGAAAAAGG 58.637 45.455 0.00 0.00 0.00 3.11
1545 1590 3.181501 TGGACGCAACAGAACAGAAAAAG 60.182 43.478 0.00 0.00 0.00 2.27
1546 1591 2.750166 TGGACGCAACAGAACAGAAAAA 59.250 40.909 0.00 0.00 0.00 1.94
1569 1614 3.825014 ACGAAGGACTACAAGAGCTAACA 59.175 43.478 0.00 0.00 0.00 2.41
1574 1619 1.272769 ACCACGAAGGACTACAAGAGC 59.727 52.381 5.70 0.00 41.22 4.09
1575 1620 3.662247 AACCACGAAGGACTACAAGAG 57.338 47.619 5.70 0.00 41.22 2.85
1632 1682 1.200519 CCAGTAACCGATTCCCAGGA 58.799 55.000 0.00 0.00 0.00 3.86
1638 1688 0.108520 TCGCACCCAGTAACCGATTC 60.109 55.000 0.00 0.00 0.00 2.52
1667 1717 2.989840 CGCACCAAAACAACAGAAACAA 59.010 40.909 0.00 0.00 0.00 2.83
1674 1724 0.522180 ACGAACGCACCAAAACAACA 59.478 45.000 0.00 0.00 0.00 3.33
1685 1735 2.549329 TCACTACAAGACTACGAACGCA 59.451 45.455 0.00 0.00 0.00 5.24
1714 1765 4.141846 TGGAGAGATGCAGATTACTTGGAC 60.142 45.833 0.00 0.00 0.00 4.02
1726 1777 2.976099 TCCGAAGTGGAGAGATGCA 58.024 52.632 0.00 0.00 43.74 3.96
1794 1845 9.022915 CACTCCGTCATACGTATAAAAATAACA 57.977 33.333 7.96 0.00 40.58 2.41
1824 1878 8.041323 ACTGAATCTAAGTACGATTCACCAAAT 58.959 33.333 16.20 3.22 46.96 2.32
1910 1968 9.113838 GGTCTATGTAAATCAATGATGTTCACT 57.886 33.333 0.00 0.00 0.00 3.41
1933 1991 1.446907 TCTTCGGTCTGACGTAGGTC 58.553 55.000 8.63 8.63 43.71 3.85
1958 2021 4.756084 AGAAAAGGCGATTCAAGTTCAG 57.244 40.909 7.81 0.00 0.00 3.02
2011 2076 1.354368 GTTTCTGGGATGGGGTCTTGA 59.646 52.381 0.00 0.00 0.00 3.02
2012 2077 1.616994 GGTTTCTGGGATGGGGTCTTG 60.617 57.143 0.00 0.00 0.00 3.02
2019 2084 1.565759 TGATCCTGGTTTCTGGGATGG 59.434 52.381 0.00 0.00 39.63 3.51
2021 2086 2.566746 ACTGATCCTGGTTTCTGGGAT 58.433 47.619 0.00 0.00 41.90 3.85
2023 2088 3.107601 TCTACTGATCCTGGTTTCTGGG 58.892 50.000 0.00 0.00 33.38 4.45
2030 2095 4.225942 TCAATTGCTTCTACTGATCCTGGT 59.774 41.667 0.00 0.00 0.00 4.00
2050 2115 4.599041 CACCCTGATTTGGTAGGAATCAA 58.401 43.478 0.00 0.00 41.49 2.57
2052 2117 2.952310 GCACCCTGATTTGGTAGGAATC 59.048 50.000 0.00 0.00 36.11 2.52
2060 2125 3.677963 AGGAAGCACCCTGATTTGG 57.322 52.632 0.00 0.00 40.05 3.28
2155 2312 8.877779 AGACATTTCTGAATCTAAAGACATTCG 58.122 33.333 0.00 0.00 32.49 3.34
2165 2322 8.520351 TCGTGAACTTAGACATTTCTGAATCTA 58.480 33.333 0.00 0.00 32.75 1.98
2175 2332 8.070171 CAGTGAAAAATCGTGAACTTAGACATT 58.930 33.333 0.00 0.00 0.00 2.71
2185 2342 3.697045 ACAACCCAGTGAAAAATCGTGAA 59.303 39.130 0.00 0.00 0.00 3.18
2198 2355 5.067954 GGTACAGTATTTCAACAACCCAGT 58.932 41.667 0.00 0.00 0.00 4.00
2326 2515 2.749584 CCCTAGGCTCTGGCATGCA 61.750 63.158 21.36 4.79 40.87 3.96
2382 2572 0.971386 TCTGACATGCAGCAGACAGA 59.029 50.000 18.73 18.73 44.52 3.41
2398 2588 4.153117 AGTCGACAGCAAAAGCTTATTCTG 59.847 41.667 19.50 15.80 0.00 3.02
2408 2598 2.866156 CTGAGTGAAGTCGACAGCAAAA 59.134 45.455 19.50 3.68 0.00 2.44
2443 2633 4.635765 GTGCACATCATATTGGTACAGTGT 59.364 41.667 13.17 0.00 42.39 3.55
2453 2643 7.822161 TTAAAGCCATAGTGCACATCATATT 57.178 32.000 21.04 8.12 0.00 1.28
2456 2646 5.242393 GGATTAAAGCCATAGTGCACATCAT 59.758 40.000 21.04 6.19 0.00 2.45
2494 2684 7.096065 GCACAAATACTGGACAAAGAAATGAAC 60.096 37.037 0.00 0.00 0.00 3.18
2511 2701 6.494893 TTGTAATCACAGAGGCACAAATAC 57.505 37.500 0.00 0.00 35.67 1.89
2534 2724 2.693074 GGGCATGGTACCGATTCAAATT 59.307 45.455 7.57 0.00 0.00 1.82
2543 2733 0.035439 AACAGAAGGGCATGGTACCG 60.035 55.000 7.57 0.00 0.00 4.02
2582 2772 0.379669 CATGTGCCGCAGAATTCTCC 59.620 55.000 4.57 0.00 0.00 3.71
2598 2788 8.969121 TGTAGCTTGATCATTAACAAAACATG 57.031 30.769 0.00 0.00 0.00 3.21
2600 2790 8.389779 TCTGTAGCTTGATCATTAACAAAACA 57.610 30.769 0.00 0.00 0.00 2.83
2615 2805 2.593346 AAGGCGATCTCTGTAGCTTG 57.407 50.000 0.00 0.00 0.00 4.01
2665 2873 7.658525 TTATCCACAGGTAAATGATGCAATT 57.341 32.000 0.00 0.00 0.00 2.32
2710 2918 6.240549 ACCTTCAGGACCTGTCAAATATAG 57.759 41.667 21.06 6.93 38.94 1.31
2714 2922 3.884037 AACCTTCAGGACCTGTCAAAT 57.116 42.857 21.06 3.94 38.94 2.32
2742 2950 5.830457 TGAACTGTTGTGATGTTTATGGGAA 59.170 36.000 0.00 0.00 0.00 3.97
2809 3017 9.244292 GAAATCTTTGGTCTTTTAAGGATACCT 57.756 33.333 0.00 0.00 33.87 3.08
2985 3193 2.806945 CCTTCCCAAGGCTCATGTTA 57.193 50.000 0.00 0.00 42.78 2.41
3148 3356 7.773224 TGTCAGAACAGGACAAAGAAAATTCTA 59.227 33.333 0.00 0.00 41.96 2.10
3153 3361 5.007034 TGTGTCAGAACAGGACAAAGAAAA 58.993 37.500 0.00 0.00 45.96 2.29
3160 3368 3.836365 TTCATGTGTCAGAACAGGACA 57.164 42.857 0.00 0.00 40.30 4.02
3203 3418 4.036852 GGAAGAAGAGACAAAACAACCCAG 59.963 45.833 0.00 0.00 0.00 4.45
3280 3495 9.638239 TTTATTCAAATGAAGGTGTTATTGCTC 57.362 29.630 1.98 0.00 37.48 4.26
3288 3506 7.287696 ACAGTTCCTTTATTCAAATGAAGGTGT 59.712 33.333 19.83 15.62 46.57 4.16
3304 3522 9.063615 CCTAACAAGTAACAATACAGTTCCTTT 57.936 33.333 0.00 0.00 35.50 3.11
3307 3525 8.665685 CATCCTAACAAGTAACAATACAGTTCC 58.334 37.037 0.00 0.00 35.50 3.62
3316 3534 6.892658 AATGTGCATCCTAACAAGTAACAA 57.107 33.333 0.00 0.00 0.00 2.83
3317 3535 6.937465 TGTAATGTGCATCCTAACAAGTAACA 59.063 34.615 0.00 0.00 0.00 2.41
3318 3536 7.119262 ACTGTAATGTGCATCCTAACAAGTAAC 59.881 37.037 0.00 0.00 0.00 2.50
3319 3537 7.165485 ACTGTAATGTGCATCCTAACAAGTAA 58.835 34.615 0.00 0.00 0.00 2.24
3320 3538 6.707290 ACTGTAATGTGCATCCTAACAAGTA 58.293 36.000 0.00 0.00 0.00 2.24
3321 3539 5.560724 ACTGTAATGTGCATCCTAACAAGT 58.439 37.500 0.00 0.00 0.00 3.16
3322 3540 6.317088 CAACTGTAATGTGCATCCTAACAAG 58.683 40.000 0.00 0.00 0.00 3.16
3347 3574 2.416747 TGAAACTCAAGAGACATGCCG 58.583 47.619 3.73 0.00 0.00 5.69
3425 3907 6.660521 TGAGCAACAAATGATTTGGAGTCTAT 59.339 34.615 20.69 1.71 44.81 1.98
3460 3942 8.734218 ATTGCAAATTAATCACCAATAATGCA 57.266 26.923 1.71 0.00 36.95 3.96
3665 4630 6.655003 TCCAAGAGAACTGTAAATTGATGGAC 59.345 38.462 0.00 0.00 0.00 4.02
3789 4754 9.537848 CAATACTTCAACAATACCGACTAAAAC 57.462 33.333 0.00 0.00 0.00 2.43
3797 4762 5.545658 ACTGCAATACTTCAACAATACCG 57.454 39.130 0.00 0.00 0.00 4.02
3815 4780 8.256611 TGACTTTGACAAATTATCTCTACTGC 57.743 34.615 0.05 0.00 0.00 4.40
3840 4805 0.105760 TGCAGACACCCCCAAAACAT 60.106 50.000 0.00 0.00 0.00 2.71
3922 4887 2.369860 CTGAGAGGCCCTATGCATGTTA 59.630 50.000 10.16 0.00 43.89 2.41
3934 4899 1.276622 TGGGTAAAGACTGAGAGGCC 58.723 55.000 0.00 0.00 0.00 5.19
3949 4914 9.561069 GTCATAGATTTTTATACAGTCATGGGT 57.439 33.333 0.00 0.00 0.00 4.51
4113 5078 4.081972 GGATACTCACAGAAGACTGCAGAA 60.082 45.833 23.35 0.00 46.95 3.02
4124 5089 7.450074 ACAAATAAACAGTGGATACTCACAGA 58.550 34.615 0.00 0.00 39.93 3.41
4152 5117 7.504926 AGACACTGTAATTATAAGGTTGGGA 57.495 36.000 0.00 0.00 0.00 4.37
4154 5119 8.561738 ACAAGACACTGTAATTATAAGGTTGG 57.438 34.615 0.00 0.00 0.00 3.77
4166 5131 9.391006 AGTAAGAATTCAAACAAGACACTGTAA 57.609 29.630 8.44 0.00 0.00 2.41
4167 5132 8.958119 AGTAAGAATTCAAACAAGACACTGTA 57.042 30.769 8.44 0.00 0.00 2.74
4203 5168 1.679139 CAAGTTCAGACCCTGCACAA 58.321 50.000 0.00 0.00 30.48 3.33
4222 5187 2.943033 AGACCTTGTGTACACTTGTTGC 59.057 45.455 25.60 11.36 0.00 4.17
4301 5266 3.126001 AGACGAACCATCACACAACAT 57.874 42.857 0.00 0.00 0.00 2.71
4332 5297 9.719355 AAAACATAAAACTTTCAAACAAGGAGT 57.281 25.926 0.00 0.00 0.00 3.85
4356 5321 8.930760 CAAAGTAACAAAGACATCCAACAAAAA 58.069 29.630 0.00 0.00 0.00 1.94
4357 5322 8.307483 TCAAAGTAACAAAGACATCCAACAAAA 58.693 29.630 0.00 0.00 0.00 2.44
4358 5323 7.831753 TCAAAGTAACAAAGACATCCAACAAA 58.168 30.769 0.00 0.00 0.00 2.83
4359 5324 7.397892 TCAAAGTAACAAAGACATCCAACAA 57.602 32.000 0.00 0.00 0.00 2.83
4360 5325 7.284261 TGATCAAAGTAACAAAGACATCCAACA 59.716 33.333 0.00 0.00 0.00 3.33
4361 5326 7.648142 TGATCAAAGTAACAAAGACATCCAAC 58.352 34.615 0.00 0.00 0.00 3.77
4396 5361 6.945938 TTCCAACTATTCGAAACCAGAAAA 57.054 33.333 0.00 0.00 0.00 2.29
4416 5381 2.821969 ACATGACTTGGCATCAGTTTCC 59.178 45.455 0.00 0.00 0.00 3.13
4423 5388 7.201591 GCATATACTGATACATGACTTGGCATC 60.202 40.741 0.00 0.00 0.00 3.91
4480 5445 1.981495 ACAGAAGTGCCTAGGCTTTCT 59.019 47.619 31.54 31.54 42.11 2.52
4481 5446 2.481289 ACAGAAGTGCCTAGGCTTTC 57.519 50.000 33.07 30.75 42.51 2.62
4505 5471 7.532209 CAGAAGACAAGTAAGAAAAATTCGAGC 59.468 37.037 0.00 0.00 34.02 5.03
4514 5480 9.706691 ACGATAAATCAGAAGACAAGTAAGAAA 57.293 29.630 0.00 0.00 0.00 2.52
4540 5506 3.255888 GCGAGGATCATGTATGACACCTA 59.744 47.826 16.80 0.00 42.67 3.08
4599 5565 1.522806 GACCACCACACGCTTGACA 60.523 57.895 0.00 0.00 0.00 3.58
4629 5595 2.143925 GGGGTCTTGAAGAACAGAACG 58.856 52.381 12.88 0.00 32.29 3.95
4647 5613 2.304180 AGAGTTGATTGGAGACACAGGG 59.696 50.000 0.00 0.00 42.67 4.45
4730 5697 3.179830 CGGTTCCTACAGAGACATTTCG 58.820 50.000 0.00 0.00 0.00 3.46
4792 5762 1.075659 GGGCTTGGGCTGAAGTCTT 59.924 57.895 2.30 0.00 38.73 3.01
4819 5789 1.731709 TGACGAACGGAATGCAATCAG 59.268 47.619 3.77 1.80 0.00 2.90
4846 5816 2.187163 GCAACGCTCCCTCCCTAC 59.813 66.667 0.00 0.00 0.00 3.18
4909 5879 4.321452 CGGTACTAGTTACTCAACAAGGCA 60.321 45.833 0.00 0.00 37.10 4.75
5003 5973 3.069872 TGGCAACTAGAACGTCCAAGTAA 59.930 43.478 0.00 0.00 37.61 2.24
5079 6049 5.047377 ACAGAAATTAACCCTTACGGACGTA 60.047 40.000 0.00 0.00 34.64 3.57
5082 6052 4.633126 GGACAGAAATTAACCCTTACGGAC 59.367 45.833 0.00 0.00 34.64 4.79
5095 6065 6.686484 AAATGGCTAAAAGGGACAGAAATT 57.314 33.333 0.00 0.00 0.00 1.82
5196 6167 8.356533 TCAAAATCGTTCTTATATTACGGGAC 57.643 34.615 0.00 0.00 36.06 4.46
5208 6179 9.355215 CACTAGTGTAGTATCAAAATCGTTCTT 57.645 33.333 15.06 0.00 37.23 2.52
5209 6180 8.521176 ACACTAGTGTAGTATCAAAATCGTTCT 58.479 33.333 26.91 0.00 42.90 3.01
5210 6181 8.684973 ACACTAGTGTAGTATCAAAATCGTTC 57.315 34.615 26.91 0.00 42.90 3.95
5211 6182 8.301720 TGACACTAGTGTAGTATCAAAATCGTT 58.698 33.333 27.98 0.00 39.11 3.85
5212 6183 7.823665 TGACACTAGTGTAGTATCAAAATCGT 58.176 34.615 27.98 0.00 39.11 3.73
5213 6184 8.683550 TTGACACTAGTGTAGTATCAAAATCG 57.316 34.615 27.98 0.00 45.96 3.34
5218 6189 6.872020 GGCTTTTGACACTAGTGTAGTATCAA 59.128 38.462 27.98 22.31 46.91 2.57
5219 6190 6.210784 AGGCTTTTGACACTAGTGTAGTATCA 59.789 38.462 27.98 17.99 45.05 2.15
5220 6191 6.631962 AGGCTTTTGACACTAGTGTAGTATC 58.368 40.000 27.98 15.61 45.05 2.24
5221 6192 6.607004 AGGCTTTTGACACTAGTGTAGTAT 57.393 37.500 27.98 11.52 45.05 2.12
5222 6193 5.335426 CGAGGCTTTTGACACTAGTGTAGTA 60.335 44.000 27.98 14.71 45.05 1.82
5223 6194 4.558898 CGAGGCTTTTGACACTAGTGTAGT 60.559 45.833 27.98 6.32 45.05 2.73
5224 6195 3.921021 CGAGGCTTTTGACACTAGTGTAG 59.079 47.826 27.98 21.29 45.05 2.74
5225 6196 3.319972 ACGAGGCTTTTGACACTAGTGTA 59.680 43.478 27.98 11.50 45.05 2.90
5227 6198 2.755650 ACGAGGCTTTTGACACTAGTG 58.244 47.619 21.44 21.44 0.00 2.74
5228 6199 4.595762 TTACGAGGCTTTTGACACTAGT 57.404 40.909 0.00 0.00 0.00 2.57
5229 6200 8.867112 TTATATTACGAGGCTTTTGACACTAG 57.133 34.615 0.00 0.00 0.00 2.57
5230 6201 8.689061 TCTTATATTACGAGGCTTTTGACACTA 58.311 33.333 0.00 0.00 0.00 2.74
5231 6202 7.553334 TCTTATATTACGAGGCTTTTGACACT 58.447 34.615 0.00 0.00 0.00 3.55
5232 6203 7.766219 TCTTATATTACGAGGCTTTTGACAC 57.234 36.000 0.00 0.00 0.00 3.67
5233 6204 7.009815 CGTTCTTATATTACGAGGCTTTTGACA 59.990 37.037 0.00 0.00 37.47 3.58
5234 6205 7.009907 ACGTTCTTATATTACGAGGCTTTTGAC 59.990 37.037 0.00 0.00 38.56 3.18
5235 6206 7.037438 ACGTTCTTATATTACGAGGCTTTTGA 58.963 34.615 0.00 0.00 38.56 2.69
5236 6207 7.230466 ACGTTCTTATATTACGAGGCTTTTG 57.770 36.000 0.00 0.00 38.56 2.44
5237 6208 7.838771 AACGTTCTTATATTACGAGGCTTTT 57.161 32.000 0.00 0.00 38.56 2.27
5238 6209 7.838771 AAACGTTCTTATATTACGAGGCTTT 57.161 32.000 0.00 0.00 38.56 3.51
5239 6210 7.838771 AAAACGTTCTTATATTACGAGGCTT 57.161 32.000 0.00 0.00 38.56 4.35
5240 6211 7.546667 TCAAAAACGTTCTTATATTACGAGGCT 59.453 33.333 0.00 0.00 38.56 4.58
5241 6212 7.678226 TCAAAAACGTTCTTATATTACGAGGC 58.322 34.615 0.00 0.00 38.56 4.70
5254 6225 9.485206 ACACTAATGTAGTATCAAAAACGTTCT 57.515 29.630 0.00 0.00 37.26 3.01
5255 6226 9.737025 GACACTAATGTAGTATCAAAAACGTTC 57.263 33.333 0.00 0.00 39.95 3.95
5256 6227 9.263538 TGACACTAATGTAGTATCAAAAACGTT 57.736 29.630 0.00 0.00 39.11 3.99
5257 6228 8.821147 TGACACTAATGTAGTATCAAAAACGT 57.179 30.769 0.00 0.00 39.11 3.99
5263 6234 7.601130 ACGCTTTTGACACTAATGTAGTATCAA 59.399 33.333 5.28 5.28 46.91 2.57
5264 6235 7.094631 ACGCTTTTGACACTAATGTAGTATCA 58.905 34.615 0.00 0.00 40.20 2.15
5265 6236 7.521509 ACGCTTTTGACACTAATGTAGTATC 57.478 36.000 0.00 0.00 39.95 2.24
5266 6237 7.817962 AGAACGCTTTTGACACTAATGTAGTAT 59.182 33.333 0.00 0.00 39.95 2.12
5267 6238 7.149973 AGAACGCTTTTGACACTAATGTAGTA 58.850 34.615 0.00 0.00 39.95 1.82
5268 6239 5.989777 AGAACGCTTTTGACACTAATGTAGT 59.010 36.000 0.00 0.00 39.95 2.73
5269 6240 6.467723 AGAACGCTTTTGACACTAATGTAG 57.532 37.500 0.00 0.00 39.95 2.74
5270 6241 6.854496 AAGAACGCTTTTGACACTAATGTA 57.146 33.333 0.00 0.00 39.95 2.29
5271 6242 5.751243 AAGAACGCTTTTGACACTAATGT 57.249 34.783 0.00 0.00 43.71 2.71
5272 6243 9.988350 AATATAAGAACGCTTTTGACACTAATG 57.012 29.630 0.00 0.00 35.56 1.90
5276 6247 9.378551 TCATAATATAAGAACGCTTTTGACACT 57.621 29.630 0.00 0.00 35.56 3.55
5277 6248 9.638300 CTCATAATATAAGAACGCTTTTGACAC 57.362 33.333 0.00 0.00 35.56 3.67
5278 6249 9.594478 TCTCATAATATAAGAACGCTTTTGACA 57.406 29.630 0.00 0.00 35.56 3.58
5279 6250 9.851043 GTCTCATAATATAAGAACGCTTTTGAC 57.149 33.333 0.00 0.00 35.56 3.18
5280 6251 8.752254 CGTCTCATAATATAAGAACGCTTTTGA 58.248 33.333 0.00 0.00 35.56 2.69
5281 6252 8.004344 CCGTCTCATAATATAAGAACGCTTTTG 58.996 37.037 0.00 0.00 35.56 2.44
5282 6253 7.924412 TCCGTCTCATAATATAAGAACGCTTTT 59.076 33.333 0.00 0.00 35.56 2.27
5283 6254 7.431249 TCCGTCTCATAATATAAGAACGCTTT 58.569 34.615 0.00 0.00 35.56 3.51
5284 6255 6.978338 TCCGTCTCATAATATAAGAACGCTT 58.022 36.000 0.00 0.00 38.15 4.68
5285 6256 6.349445 CCTCCGTCTCATAATATAAGAACGCT 60.349 42.308 0.00 0.00 0.00 5.07
5286 6257 5.800941 CCTCCGTCTCATAATATAAGAACGC 59.199 44.000 0.00 0.00 0.00 4.84
5287 6258 6.150641 TCCCTCCGTCTCATAATATAAGAACG 59.849 42.308 0.00 0.00 0.00 3.95
5288 6259 7.177041 ACTCCCTCCGTCTCATAATATAAGAAC 59.823 40.741 0.00 0.00 0.00 3.01
5289 6260 7.239438 ACTCCCTCCGTCTCATAATATAAGAA 58.761 38.462 0.00 0.00 0.00 2.52
5290 6261 6.791371 ACTCCCTCCGTCTCATAATATAAGA 58.209 40.000 0.00 0.00 0.00 2.10
5291 6262 7.830201 AGTACTCCCTCCGTCTCATAATATAAG 59.170 40.741 0.00 0.00 0.00 1.73
5292 6263 7.696981 AGTACTCCCTCCGTCTCATAATATAA 58.303 38.462 0.00 0.00 0.00 0.98
5293 6264 7.268212 AGTACTCCCTCCGTCTCATAATATA 57.732 40.000 0.00 0.00 0.00 0.86
5294 6265 6.142259 AGTACTCCCTCCGTCTCATAATAT 57.858 41.667 0.00 0.00 0.00 1.28
5295 6266 5.579753 AGTACTCCCTCCGTCTCATAATA 57.420 43.478 0.00 0.00 0.00 0.98
5296 6267 4.456662 AGTACTCCCTCCGTCTCATAAT 57.543 45.455 0.00 0.00 0.00 1.28
5297 6268 3.947612 AGTACTCCCTCCGTCTCATAA 57.052 47.619 0.00 0.00 0.00 1.90
5298 6269 3.713248 TGTAGTACTCCCTCCGTCTCATA 59.287 47.826 0.00 0.00 0.00 2.15
5299 6270 2.508716 TGTAGTACTCCCTCCGTCTCAT 59.491 50.000 0.00 0.00 0.00 2.90
5300 6271 1.911357 TGTAGTACTCCCTCCGTCTCA 59.089 52.381 0.00 0.00 0.00 3.27
5301 6272 2.706339 TGTAGTACTCCCTCCGTCTC 57.294 55.000 0.00 0.00 0.00 3.36
5302 6273 3.053842 TGAATGTAGTACTCCCTCCGTCT 60.054 47.826 0.00 0.00 0.00 4.18
5303 6274 3.285484 TGAATGTAGTACTCCCTCCGTC 58.715 50.000 0.00 0.00 0.00 4.79
5304 6275 3.377253 TGAATGTAGTACTCCCTCCGT 57.623 47.619 0.00 0.00 0.00 4.69
5305 6276 4.099573 ACAATGAATGTAGTACTCCCTCCG 59.900 45.833 0.00 0.00 41.63 4.63
5306 6277 5.615925 ACAATGAATGTAGTACTCCCTCC 57.384 43.478 0.00 0.00 41.63 4.30
5318 6289 6.657541 ACTGTCCGGTTAAATACAATGAATGT 59.342 34.615 0.00 0.00 46.36 2.71
5319 6290 7.083875 ACTGTCCGGTTAAATACAATGAATG 57.916 36.000 0.00 0.00 0.00 2.67
5320 6291 8.044908 AGTACTGTCCGGTTAAATACAATGAAT 58.955 33.333 0.00 0.00 0.00 2.57
5321 6292 7.388437 AGTACTGTCCGGTTAAATACAATGAA 58.612 34.615 0.00 0.00 0.00 2.57
5322 6293 6.938507 AGTACTGTCCGGTTAAATACAATGA 58.061 36.000 0.00 0.00 0.00 2.57
5373 6344 0.764890 GCCCTGGCACCAGACATATA 59.235 55.000 18.44 0.00 46.30 0.86
5374 6345 1.533711 GCCCTGGCACCAGACATAT 59.466 57.895 18.44 0.00 46.30 1.78
5375 6346 2.998097 GCCCTGGCACCAGACATA 59.002 61.111 18.44 0.00 46.30 2.29
5386 6357 3.214123 CCATGCACGATGCCCTGG 61.214 66.667 7.38 9.68 44.23 4.45
5435 6406 6.480651 TCGAAAAGTCAGCACTGTTTGTTATA 59.519 34.615 0.00 0.00 33.98 0.98
5436 6407 5.295787 TCGAAAAGTCAGCACTGTTTGTTAT 59.704 36.000 0.00 0.00 33.98 1.89
5474 6445 0.521735 CACGTAGGAAAAGGCTTGGC 59.478 55.000 0.00 0.00 0.00 4.52
5502 6475 6.421801 AGTTCAAAATAAAGCATGTCAGCAAC 59.578 34.615 0.00 0.00 36.85 4.17
5503 6476 6.514947 AGTTCAAAATAAAGCATGTCAGCAA 58.485 32.000 0.00 0.00 36.85 3.91
5555 6528 8.755018 CGAAACTTCAAAATAAAGCATGTTCTT 58.245 29.630 0.00 0.00 0.00 2.52
5558 6531 9.691362 ATACGAAACTTCAAAATAAAGCATGTT 57.309 25.926 0.00 0.00 0.00 2.71
5620 6593 4.830600 GTGGTGGGAAGAAAGGTAAAATGA 59.169 41.667 0.00 0.00 0.00 2.57
5633 6606 0.546598 GACATAGGGGTGGTGGGAAG 59.453 60.000 0.00 0.00 0.00 3.46
5649 6622 2.708861 ACACTACATGGAAGGTTGGACA 59.291 45.455 0.00 0.00 28.09 4.02
5758 6737 6.664515 TGTTCATCAAATTCTAACCGTGAAC 58.335 36.000 7.69 7.69 42.55 3.18
5895 6899 9.412460 AGAGTGCAAATTCATAAAATGGATCTA 57.588 29.630 0.00 0.00 0.00 1.98
5963 6968 4.704833 GGAAGGCCTGAGCGTGCA 62.705 66.667 5.69 0.00 41.24 4.57
5981 6986 1.734707 CGTCCCAAATCGCGTAACTCT 60.735 52.381 5.77 0.00 0.00 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.