Multiple sequence alignment - TraesCS5D01G182200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G182200 chr5D 100.000 3228 0 0 1 3228 283111305 283108078 0.000000e+00 5962.0
1 TraesCS5D01G182200 chr5D 87.402 1151 89 26 1023 2149 230369158 230370276 0.000000e+00 1271.0
2 TraesCS5D01G182200 chr5D 90.366 820 46 18 2002 2794 289420141 289419328 0.000000e+00 1046.0
3 TraesCS5D01G182200 chr5D 90.122 820 48 18 2002 2794 289354334 289353521 0.000000e+00 1035.0
4 TraesCS5D01G182200 chr5D 94.634 205 11 0 2787 2991 289353403 289353199 5.200000e-83 318.0
5 TraesCS5D01G182200 chr5D 90.714 140 8 3 3094 3228 283343071 283342932 7.110000e-42 182.0
6 TraesCS5D01G182200 chr5D 100.000 31 0 0 993 1023 283110344 283110314 1.250000e-04 58.4
7 TraesCS5D01G182200 chr2B 93.568 1679 92 9 996 2665 137349265 137347594 0.000000e+00 2488.0
8 TraesCS5D01G182200 chr2B 93.675 1660 90 8 1015 2665 137814408 137812755 0.000000e+00 2470.0
9 TraesCS5D01G182200 chr2B 90.185 1620 131 15 1016 2616 135358072 135359682 0.000000e+00 2085.0
10 TraesCS5D01G182200 chr2B 87.662 1694 127 29 1015 2667 135126797 135128449 0.000000e+00 1895.0
11 TraesCS5D01G182200 chr2B 87.310 591 35 26 408 992 136639461 136638905 9.760000e-180 640.0
12 TraesCS5D01G182200 chr2B 92.208 308 14 4 2787 3091 137347330 137347030 8.280000e-116 427.0
13 TraesCS5D01G182200 chr2B 91.221 262 15 6 732 992 137622677 137622423 1.840000e-92 350.0
14 TraesCS5D01G182200 chr2B 87.869 305 18 8 2787 3088 136635683 136635395 1.110000e-89 340.0
15 TraesCS5D01G182200 chr2B 91.964 224 14 4 769 992 136815293 136815074 8.700000e-81 311.0
16 TraesCS5D01G182200 chr2B 91.964 224 14 4 769 992 137014950 137014731 8.700000e-81 311.0
17 TraesCS5D01G182200 chr2B 88.803 259 21 5 733 986 137349499 137349244 8.700000e-81 311.0
18 TraesCS5D01G182200 chr2B 87.766 188 17 4 419 603 136815495 136815311 7.010000e-52 215.0
19 TraesCS5D01G182200 chr2B 87.766 188 17 4 419 603 137015152 137014968 7.010000e-52 215.0
20 TraesCS5D01G182200 chr2B 94.776 134 4 3 438 569 137349650 137349518 4.220000e-49 206.0
21 TraesCS5D01G182200 chr2B 88.312 154 12 4 419 569 137622845 137622695 2.560000e-41 180.0
22 TraesCS5D01G182200 chr7A 92.071 1690 78 19 996 2665 618195295 618193642 0.000000e+00 2327.0
23 TraesCS5D01G182200 chr7A 90.366 820 46 18 2002 2794 628384975 628384162 0.000000e+00 1046.0
24 TraesCS5D01G182200 chr7A 87.739 261 18 8 732 992 618195514 618195268 3.150000e-75 292.0
25 TraesCS5D01G182200 chr7A 95.135 185 6 1 422 603 618195695 618195511 4.070000e-74 289.0
26 TraesCS5D01G182200 chr2D 92.461 1658 76 16 1021 2665 85703702 85702081 0.000000e+00 2324.0
27 TraesCS5D01G182200 chr2D 89.297 1635 124 22 1016 2616 83225308 83226925 0.000000e+00 2002.0
28 TraesCS5D01G182200 chr2D 91.487 928 69 6 1740 2658 85407431 85406505 0.000000e+00 1267.0
29 TraesCS5D01G182200 chr2D 91.487 928 68 6 1740 2658 84936634 84935709 0.000000e+00 1266.0
30 TraesCS5D01G182200 chr2D 91.056 928 68 7 1740 2658 84779058 84778137 0.000000e+00 1240.0
31 TraesCS5D01G182200 chr2D 91.314 449 29 4 546 987 84780779 84780334 3.560000e-169 604.0
32 TraesCS5D01G182200 chr2D 85.229 589 35 27 408 981 85252345 85251794 2.810000e-155 558.0
33 TraesCS5D01G182200 chr2D 93.870 261 12 4 732 992 85408973 85408717 1.090000e-104 390.0
34 TraesCS5D01G182200 chr2D 91.259 286 13 4 2809 3091 85701823 85701547 2.350000e-101 379.0
35 TraesCS5D01G182200 chr2D 88.197 305 17 8 2787 3088 85248929 85248641 2.380000e-91 346.0
36 TraesCS5D01G182200 chr2D 89.418 189 13 4 419 603 85409155 85408970 6.960000e-57 231.0
37 TraesCS5D01G182200 chr2D 88.947 190 12 5 419 603 84938307 84938122 3.240000e-55 226.0
38 TraesCS5D01G182200 chr2D 86.957 161 12 6 837 992 84938076 84937920 4.280000e-39 172.0
39 TraesCS5D01G182200 chr2A 92.396 1657 79 13 1015 2665 84228416 84230031 0.000000e+00 2318.0
40 TraesCS5D01G182200 chr2A 92.126 1651 87 17 1023 2667 84143741 84145354 0.000000e+00 2289.0
41 TraesCS5D01G182200 chr2A 89.802 1667 136 15 1023 2666 83985095 83986750 0.000000e+00 2106.0
42 TraesCS5D01G182200 chr2A 91.034 290 14 6 2809 3095 85809044 85808764 6.530000e-102 381.0
43 TraesCS5D01G182200 chr2A 91.034 290 14 6 2809 3095 85924951 85924671 6.530000e-102 381.0
44 TraesCS5D01G182200 chr2A 90.210 286 16 4 2809 3091 86060025 86059749 2.370000e-96 363.0
45 TraesCS5D01G182200 chr2A 86.416 346 16 10 408 751 85614038 85613722 1.840000e-92 350.0
46 TraesCS5D01G182200 chr2A 86.416 346 16 10 408 751 85811556 85811240 1.840000e-92 350.0
47 TraesCS5D01G182200 chr5A 89.264 1630 105 32 1015 2616 326437855 326436268 0.000000e+00 1977.0
48 TraesCS5D01G182200 chr5A 92.790 319 7 2 476 791 375377685 375377380 6.350000e-122 448.0
49 TraesCS5D01G182200 chr5A 89.630 135 10 3 3094 3228 375550925 375550795 5.540000e-38 169.0
50 TraesCS5D01G182200 chr5B 96.622 1036 25 3 996 2027 321478186 321477157 0.000000e+00 1711.0
51 TraesCS5D01G182200 chr5B 94.562 901 22 10 2080 2953 321477143 321476243 0.000000e+00 1367.0
52 TraesCS5D01G182200 chr5B 95.194 645 15 6 358 992 321478797 321478159 0.000000e+00 1005.0
53 TraesCS5D01G182200 chr5B 93.296 358 18 4 1 354 321483818 321483463 1.030000e-144 523.0
54 TraesCS5D01G182200 chr5B 90.210 143 6 3 3094 3228 321531624 321531482 2.560000e-41 180.0
55 TraesCS5D01G182200 chr5B 89.510 143 5 3 3094 3228 321471989 321471849 4.280000e-39 172.0
56 TraesCS5D01G182200 chr5B 95.181 83 3 1 3010 3091 321476245 321476163 2.610000e-26 130.0
57 TraesCS5D01G182200 chr7B 90.256 821 46 18 2002 2794 589695353 589694539 0.000000e+00 1042.0
58 TraesCS5D01G182200 chr7B 87.683 820 48 25 2002 2794 588877312 588876519 0.000000e+00 905.0
59 TraesCS5D01G182200 chr1B 90.000 820 49 17 2002 2794 133123211 133122398 0.000000e+00 1029.0
60 TraesCS5D01G182200 chr1B 95.122 205 8 1 2787 2991 133122286 133122084 4.020000e-84 322.0
61 TraesCS5D01G182200 chr6A 89.814 805 48 19 2002 2779 107265354 107266151 0.000000e+00 1002.0
62 TraesCS5D01G182200 chr6A 83.801 321 25 14 2500 2794 107262740 107262421 2.450000e-71 279.0
63 TraesCS5D01G182200 chr6D 90.030 331 25 3 28 354 417227651 417227325 3.850000e-114 422.0
64 TraesCS5D01G182200 chr4A 91.034 290 14 6 2809 3095 349804579 349804299 6.530000e-102 381.0
65 TraesCS5D01G182200 chr4A 86.416 346 16 10 408 751 349807091 349806775 1.840000e-92 350.0
66 TraesCS5D01G182200 chrUn 86.416 346 16 10 408 751 354326380 354326064 1.840000e-92 350.0
67 TraesCS5D01G182200 chr3A 87.023 131 17 0 738 868 564437957 564437827 7.220000e-32 148.0
68 TraesCS5D01G182200 chr3D 100.000 30 0 0 5 34 599485279 599485308 4.500000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G182200 chr5D 283108078 283111305 3227 True 3010.200000 5962 100.000000 1 3228 2 chr5D.!!$R3 3227
1 TraesCS5D01G182200 chr5D 230369158 230370276 1118 False 1271.000000 1271 87.402000 1023 2149 1 chr5D.!!$F1 1126
2 TraesCS5D01G182200 chr5D 289419328 289420141 813 True 1046.000000 1046 90.366000 2002 2794 1 chr5D.!!$R2 792
3 TraesCS5D01G182200 chr5D 289353199 289354334 1135 True 676.500000 1035 92.378000 2002 2991 2 chr5D.!!$R4 989
4 TraesCS5D01G182200 chr2B 137812755 137814408 1653 True 2470.000000 2470 93.675000 1015 2665 1 chr2B.!!$R1 1650
5 TraesCS5D01G182200 chr2B 135358072 135359682 1610 False 2085.000000 2085 90.185000 1016 2616 1 chr2B.!!$F2 1600
6 TraesCS5D01G182200 chr2B 135126797 135128449 1652 False 1895.000000 1895 87.662000 1015 2667 1 chr2B.!!$F1 1652
7 TraesCS5D01G182200 chr2B 137347030 137349650 2620 True 858.000000 2488 92.338750 438 3091 4 chr2B.!!$R5 2653
8 TraesCS5D01G182200 chr2B 136635395 136639461 4066 True 490.000000 640 87.589500 408 3088 2 chr2B.!!$R2 2680
9 TraesCS5D01G182200 chr7A 628384162 628384975 813 True 1046.000000 1046 90.366000 2002 2794 1 chr7A.!!$R1 792
10 TraesCS5D01G182200 chr7A 618193642 618195695 2053 True 969.333333 2327 91.648333 422 2665 3 chr7A.!!$R2 2243
11 TraesCS5D01G182200 chr2D 83225308 83226925 1617 False 2002.000000 2002 89.297000 1016 2616 1 chr2D.!!$F1 1600
12 TraesCS5D01G182200 chr2D 85701547 85703702 2155 True 1351.500000 2324 91.860000 1021 3091 2 chr2D.!!$R5 2070
13 TraesCS5D01G182200 chr2D 84778137 84780779 2642 True 922.000000 1240 91.185000 546 2658 2 chr2D.!!$R1 2112
14 TraesCS5D01G182200 chr2D 85406505 85409155 2650 True 629.333333 1267 91.591667 419 2658 3 chr2D.!!$R4 2239
15 TraesCS5D01G182200 chr2D 84935709 84938307 2598 True 554.666667 1266 89.130333 419 2658 3 chr2D.!!$R2 2239
16 TraesCS5D01G182200 chr2D 85248641 85252345 3704 True 452.000000 558 86.713000 408 3088 2 chr2D.!!$R3 2680
17 TraesCS5D01G182200 chr2A 84228416 84230031 1615 False 2318.000000 2318 92.396000 1015 2665 1 chr2A.!!$F3 1650
18 TraesCS5D01G182200 chr2A 84143741 84145354 1613 False 2289.000000 2289 92.126000 1023 2667 1 chr2A.!!$F2 1644
19 TraesCS5D01G182200 chr2A 83985095 83986750 1655 False 2106.000000 2106 89.802000 1023 2666 1 chr2A.!!$F1 1643
20 TraesCS5D01G182200 chr2A 85808764 85811556 2792 True 365.500000 381 88.725000 408 3095 2 chr2A.!!$R4 2687
21 TraesCS5D01G182200 chr5A 326436268 326437855 1587 True 1977.000000 1977 89.264000 1015 2616 1 chr5A.!!$R1 1601
22 TraesCS5D01G182200 chr5B 321476163 321478797 2634 True 1053.250000 1711 95.389750 358 3091 4 chr5B.!!$R4 2733
23 TraesCS5D01G182200 chr7B 589694539 589695353 814 True 1042.000000 1042 90.256000 2002 2794 1 chr7B.!!$R2 792
24 TraesCS5D01G182200 chr7B 588876519 588877312 793 True 905.000000 905 87.683000 2002 2794 1 chr7B.!!$R1 792
25 TraesCS5D01G182200 chr1B 133122084 133123211 1127 True 675.500000 1029 92.561000 2002 2991 2 chr1B.!!$R1 989
26 TraesCS5D01G182200 chr6A 107265354 107266151 797 False 1002.000000 1002 89.814000 2002 2779 1 chr6A.!!$F1 777
27 TraesCS5D01G182200 chr4A 349804299 349807091 2792 True 365.500000 381 88.725000 408 3095 2 chr4A.!!$R1 2687

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
25 26 0.171231 GGCTGAAGATTTGAACGCCC 59.829 55.0 0.00 0.0 0.0 6.13 F
127 128 0.179032 TTGGTGCGTGAGGATGTTGT 60.179 50.0 0.00 0.0 0.0 3.32 F
197 198 0.179032 TGTGATTTGGTCGTGCTGGT 60.179 50.0 0.00 0.0 0.0 4.00 F
1005 1054 0.249155 GTCGGGTCGCCGATGAATAA 60.249 55.0 7.44 0.0 44.1 1.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1001 1050 0.179200 CGACCGCAAGCGCTTTTATT 60.179 50.0 22.51 5.25 38.24 1.40 R
1840 2510 0.734253 CTGGAGTCGCCTTCTTCACG 60.734 60.0 0.00 0.00 37.63 4.35 R
2213 3821 7.234661 TGCCCTTTATTTACTTAAACCCTTG 57.765 36.0 0.00 0.00 0.00 3.61 R
2303 3914 0.106708 TTTCCGCTCTGTCTTGTGCT 59.893 50.0 0.00 0.00 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.704725 TTGGCTGAAGATTTGAACGC 57.295 45.000 0.00 0.00 0.00 4.84
24 25 0.881118 TGGCTGAAGATTTGAACGCC 59.119 50.000 0.00 0.00 36.64 5.68
25 26 0.171231 GGCTGAAGATTTGAACGCCC 59.829 55.000 0.00 0.00 0.00 6.13
26 27 0.179189 GCTGAAGATTTGAACGCCCG 60.179 55.000 0.00 0.00 0.00 6.13
27 28 1.438651 CTGAAGATTTGAACGCCCGA 58.561 50.000 0.00 0.00 0.00 5.14
28 29 1.394917 CTGAAGATTTGAACGCCCGAG 59.605 52.381 0.00 0.00 0.00 4.63
29 30 1.001520 TGAAGATTTGAACGCCCGAGA 59.998 47.619 0.00 0.00 0.00 4.04
30 31 2.073816 GAAGATTTGAACGCCCGAGAA 58.926 47.619 0.00 0.00 0.00 2.87
31 32 2.178912 AGATTTGAACGCCCGAGAAA 57.821 45.000 0.00 0.00 0.00 2.52
32 33 1.804748 AGATTTGAACGCCCGAGAAAC 59.195 47.619 0.00 0.00 0.00 2.78
33 34 1.804748 GATTTGAACGCCCGAGAAACT 59.195 47.619 0.00 0.00 0.00 2.66
34 35 1.670791 TTTGAACGCCCGAGAAACTT 58.329 45.000 0.00 0.00 0.00 2.66
35 36 2.529780 TTGAACGCCCGAGAAACTTA 57.470 45.000 0.00 0.00 0.00 2.24
36 37 2.754946 TGAACGCCCGAGAAACTTAT 57.245 45.000 0.00 0.00 0.00 1.73
37 38 2.343101 TGAACGCCCGAGAAACTTATG 58.657 47.619 0.00 0.00 0.00 1.90
38 39 2.289195 TGAACGCCCGAGAAACTTATGT 60.289 45.455 0.00 0.00 0.00 2.29
39 40 2.467566 ACGCCCGAGAAACTTATGTT 57.532 45.000 0.00 0.00 38.16 2.71
41 42 2.482721 ACGCCCGAGAAACTTATGTTTG 59.517 45.455 11.15 0.00 45.36 2.93
42 43 2.727916 CGCCCGAGAAACTTATGTTTGC 60.728 50.000 11.15 7.27 45.36 3.68
43 44 2.488153 GCCCGAGAAACTTATGTTTGCT 59.512 45.455 11.15 8.21 45.36 3.91
44 45 3.426292 GCCCGAGAAACTTATGTTTGCTC 60.426 47.826 11.15 14.06 45.36 4.26
45 46 4.003648 CCCGAGAAACTTATGTTTGCTCT 58.996 43.478 11.15 3.14 45.36 4.09
46 47 4.142816 CCCGAGAAACTTATGTTTGCTCTG 60.143 45.833 11.15 12.00 45.36 3.35
47 48 4.452455 CCGAGAAACTTATGTTTGCTCTGT 59.548 41.667 11.15 0.00 45.36 3.41
48 49 5.049405 CCGAGAAACTTATGTTTGCTCTGTT 60.049 40.000 11.15 0.00 45.36 3.16
49 50 6.430451 CGAGAAACTTATGTTTGCTCTGTTT 58.570 36.000 11.15 0.00 45.36 2.83
50 51 6.912591 CGAGAAACTTATGTTTGCTCTGTTTT 59.087 34.615 11.15 0.00 45.36 2.43
51 52 7.112148 CGAGAAACTTATGTTTGCTCTGTTTTC 59.888 37.037 11.15 0.00 45.36 2.29
52 53 7.771183 AGAAACTTATGTTTGCTCTGTTTTCA 58.229 30.769 11.15 0.00 45.36 2.69
53 54 8.416329 AGAAACTTATGTTTGCTCTGTTTTCAT 58.584 29.630 11.15 0.00 45.36 2.57
54 55 8.947055 AAACTTATGTTTGCTCTGTTTTCATT 57.053 26.923 5.97 0.00 43.90 2.57
55 56 8.947055 AACTTATGTTTGCTCTGTTTTCATTT 57.053 26.923 0.00 0.00 31.37 2.32
56 57 8.579682 ACTTATGTTTGCTCTGTTTTCATTTC 57.420 30.769 0.00 0.00 0.00 2.17
57 58 8.416329 ACTTATGTTTGCTCTGTTTTCATTTCT 58.584 29.630 0.00 0.00 0.00 2.52
58 59 8.578308 TTATGTTTGCTCTGTTTTCATTTCTG 57.422 30.769 0.00 0.00 0.00 3.02
59 60 5.964758 TGTTTGCTCTGTTTTCATTTCTGT 58.035 33.333 0.00 0.00 0.00 3.41
60 61 6.397272 TGTTTGCTCTGTTTTCATTTCTGTT 58.603 32.000 0.00 0.00 0.00 3.16
61 62 6.310956 TGTTTGCTCTGTTTTCATTTCTGTTG 59.689 34.615 0.00 0.00 0.00 3.33
62 63 4.935702 TGCTCTGTTTTCATTTCTGTTGG 58.064 39.130 0.00 0.00 0.00 3.77
63 64 4.402155 TGCTCTGTTTTCATTTCTGTTGGT 59.598 37.500 0.00 0.00 0.00 3.67
64 65 5.592282 TGCTCTGTTTTCATTTCTGTTGGTA 59.408 36.000 0.00 0.00 0.00 3.25
65 66 6.145535 GCTCTGTTTTCATTTCTGTTGGTAG 58.854 40.000 0.00 0.00 0.00 3.18
66 67 6.072112 TCTGTTTTCATTTCTGTTGGTAGC 57.928 37.500 0.00 0.00 0.00 3.58
67 68 5.592282 TCTGTTTTCATTTCTGTTGGTAGCA 59.408 36.000 0.00 0.00 0.00 3.49
68 69 6.265196 TCTGTTTTCATTTCTGTTGGTAGCAT 59.735 34.615 0.00 0.00 0.00 3.79
69 70 6.815089 TGTTTTCATTTCTGTTGGTAGCATT 58.185 32.000 0.00 0.00 0.00 3.56
70 71 7.946207 TGTTTTCATTTCTGTTGGTAGCATTA 58.054 30.769 0.00 0.00 0.00 1.90
71 72 8.081633 TGTTTTCATTTCTGTTGGTAGCATTAG 58.918 33.333 0.00 0.00 0.00 1.73
72 73 7.759489 TTTCATTTCTGTTGGTAGCATTAGT 57.241 32.000 0.00 0.00 0.00 2.24
73 74 6.741992 TCATTTCTGTTGGTAGCATTAGTG 57.258 37.500 0.00 0.00 0.00 2.74
90 91 7.992180 CATTAGTGCTTTTCAAAGAGTTGTT 57.008 32.000 3.35 0.00 38.28 2.83
91 92 8.411318 CATTAGTGCTTTTCAAAGAGTTGTTT 57.589 30.769 3.35 0.00 38.28 2.83
92 93 8.534778 CATTAGTGCTTTTCAAAGAGTTGTTTC 58.465 33.333 3.35 0.00 38.28 2.78
93 94 6.272822 AGTGCTTTTCAAAGAGTTGTTTCT 57.727 33.333 3.35 0.00 38.28 2.52
94 95 6.691508 AGTGCTTTTCAAAGAGTTGTTTCTT 58.308 32.000 3.35 0.00 39.03 2.52
95 96 7.826690 AGTGCTTTTCAAAGAGTTGTTTCTTA 58.173 30.769 3.35 0.00 36.42 2.10
96 97 7.755373 AGTGCTTTTCAAAGAGTTGTTTCTTAC 59.245 33.333 3.35 0.00 36.42 2.34
97 98 7.009265 GTGCTTTTCAAAGAGTTGTTTCTTACC 59.991 37.037 3.35 0.00 36.42 2.85
98 99 7.033185 GCTTTTCAAAGAGTTGTTTCTTACCA 58.967 34.615 3.35 0.00 36.42 3.25
99 100 7.544217 GCTTTTCAAAGAGTTGTTTCTTACCAA 59.456 33.333 3.35 0.00 36.42 3.67
100 101 8.751302 TTTTCAAAGAGTTGTTTCTTACCAAC 57.249 30.769 0.00 0.00 36.42 3.77
101 102 7.455641 TTCAAAGAGTTGTTTCTTACCAACA 57.544 32.000 5.45 0.00 36.42 3.33
102 103 7.083875 TCAAAGAGTTGTTTCTTACCAACAG 57.916 36.000 5.45 0.00 36.42 3.16
103 104 6.094881 TCAAAGAGTTGTTTCTTACCAACAGG 59.905 38.462 5.45 0.00 36.42 4.00
104 105 4.461198 AGAGTTGTTTCTTACCAACAGGG 58.539 43.478 5.45 0.00 44.81 4.45
105 106 4.165372 AGAGTTGTTTCTTACCAACAGGGA 59.835 41.667 5.45 0.00 41.15 4.20
106 107 4.461198 AGTTGTTTCTTACCAACAGGGAG 58.539 43.478 5.45 0.00 41.15 4.30
107 108 3.502123 TGTTTCTTACCAACAGGGAGG 57.498 47.619 0.00 0.00 41.15 4.30
108 109 2.781174 TGTTTCTTACCAACAGGGAGGT 59.219 45.455 0.00 0.00 41.15 3.85
109 110 3.203487 TGTTTCTTACCAACAGGGAGGTT 59.797 43.478 0.00 0.00 41.15 3.50
110 111 3.502123 TTCTTACCAACAGGGAGGTTG 57.498 47.619 0.00 0.00 45.97 3.77
114 115 3.763671 CAACAGGGAGGTTGGTGC 58.236 61.111 0.00 0.00 43.39 5.01
115 116 2.113139 AACAGGGAGGTTGGTGCG 59.887 61.111 0.00 0.00 0.00 5.34
116 117 2.752807 AACAGGGAGGTTGGTGCGT 61.753 57.895 0.00 0.00 0.00 5.24
117 118 2.669569 CAGGGAGGTTGGTGCGTG 60.670 66.667 0.00 0.00 0.00 5.34
118 119 2.847234 AGGGAGGTTGGTGCGTGA 60.847 61.111 0.00 0.00 0.00 4.35
119 120 2.358737 GGGAGGTTGGTGCGTGAG 60.359 66.667 0.00 0.00 0.00 3.51
120 121 2.358737 GGAGGTTGGTGCGTGAGG 60.359 66.667 0.00 0.00 0.00 3.86
121 122 2.741092 GAGGTTGGTGCGTGAGGA 59.259 61.111 0.00 0.00 0.00 3.71
122 123 1.296715 GAGGTTGGTGCGTGAGGAT 59.703 57.895 0.00 0.00 0.00 3.24
123 124 1.003355 AGGTTGGTGCGTGAGGATG 60.003 57.895 0.00 0.00 0.00 3.51
124 125 1.302511 GGTTGGTGCGTGAGGATGT 60.303 57.895 0.00 0.00 0.00 3.06
125 126 0.889186 GGTTGGTGCGTGAGGATGTT 60.889 55.000 0.00 0.00 0.00 2.71
126 127 0.238289 GTTGGTGCGTGAGGATGTTG 59.762 55.000 0.00 0.00 0.00 3.33
127 128 0.179032 TTGGTGCGTGAGGATGTTGT 60.179 50.000 0.00 0.00 0.00 3.32
128 129 0.682292 TGGTGCGTGAGGATGTTGTA 59.318 50.000 0.00 0.00 0.00 2.41
129 130 1.277842 TGGTGCGTGAGGATGTTGTAT 59.722 47.619 0.00 0.00 0.00 2.29
130 131 2.290008 TGGTGCGTGAGGATGTTGTATT 60.290 45.455 0.00 0.00 0.00 1.89
131 132 3.055747 TGGTGCGTGAGGATGTTGTATTA 60.056 43.478 0.00 0.00 0.00 0.98
132 133 3.555956 GGTGCGTGAGGATGTTGTATTAG 59.444 47.826 0.00 0.00 0.00 1.73
133 134 4.181578 GTGCGTGAGGATGTTGTATTAGT 58.818 43.478 0.00 0.00 0.00 2.24
134 135 4.630069 GTGCGTGAGGATGTTGTATTAGTT 59.370 41.667 0.00 0.00 0.00 2.24
135 136 5.121768 GTGCGTGAGGATGTTGTATTAGTTT 59.878 40.000 0.00 0.00 0.00 2.66
136 137 6.311935 GTGCGTGAGGATGTTGTATTAGTTTA 59.688 38.462 0.00 0.00 0.00 2.01
137 138 6.533723 TGCGTGAGGATGTTGTATTAGTTTAG 59.466 38.462 0.00 0.00 0.00 1.85
138 139 6.755141 GCGTGAGGATGTTGTATTAGTTTAGA 59.245 38.462 0.00 0.00 0.00 2.10
139 140 7.438459 GCGTGAGGATGTTGTATTAGTTTAGAT 59.562 37.037 0.00 0.00 0.00 1.98
140 141 8.755941 CGTGAGGATGTTGTATTAGTTTAGATG 58.244 37.037 0.00 0.00 0.00 2.90
141 142 8.552034 GTGAGGATGTTGTATTAGTTTAGATGC 58.448 37.037 0.00 0.00 0.00 3.91
142 143 8.486210 TGAGGATGTTGTATTAGTTTAGATGCT 58.514 33.333 0.00 0.00 0.00 3.79
143 144 9.331282 GAGGATGTTGTATTAGTTTAGATGCTT 57.669 33.333 0.00 0.00 0.00 3.91
144 145 9.686683 AGGATGTTGTATTAGTTTAGATGCTTT 57.313 29.630 0.00 0.00 0.00 3.51
145 146 9.937175 GGATGTTGTATTAGTTTAGATGCTTTC 57.063 33.333 0.00 0.00 0.00 2.62
156 157 8.072321 AGTTTAGATGCTTTCTAGATCTGACA 57.928 34.615 5.18 0.00 38.19 3.58
157 158 7.978975 AGTTTAGATGCTTTCTAGATCTGACAC 59.021 37.037 5.18 0.00 38.19 3.67
158 159 5.929058 AGATGCTTTCTAGATCTGACACA 57.071 39.130 5.18 0.00 30.96 3.72
159 160 6.291648 AGATGCTTTCTAGATCTGACACAA 57.708 37.500 5.18 0.00 30.96 3.33
160 161 6.339730 AGATGCTTTCTAGATCTGACACAAG 58.660 40.000 5.18 1.96 30.96 3.16
161 162 4.248859 TGCTTTCTAGATCTGACACAAGC 58.751 43.478 5.18 12.51 36.70 4.01
162 163 4.020751 TGCTTTCTAGATCTGACACAAGCT 60.021 41.667 17.76 0.00 37.02 3.74
163 164 4.566360 GCTTTCTAGATCTGACACAAGCTC 59.434 45.833 5.18 0.00 33.98 4.09
164 165 5.718146 CTTTCTAGATCTGACACAAGCTCA 58.282 41.667 5.18 0.00 0.00 4.26
165 166 4.979943 TCTAGATCTGACACAAGCTCAG 57.020 45.455 5.18 0.00 37.14 3.35
166 167 2.383368 AGATCTGACACAAGCTCAGC 57.617 50.000 0.00 0.00 35.95 4.26
167 168 1.622312 AGATCTGACACAAGCTCAGCA 59.378 47.619 0.00 0.00 35.95 4.41
168 169 2.038164 AGATCTGACACAAGCTCAGCAA 59.962 45.455 0.00 0.00 35.95 3.91
169 170 2.330440 TCTGACACAAGCTCAGCAAA 57.670 45.000 0.00 0.00 35.95 3.68
170 171 2.216046 TCTGACACAAGCTCAGCAAAG 58.784 47.619 0.00 0.00 35.95 2.77
171 172 1.945394 CTGACACAAGCTCAGCAAAGT 59.055 47.619 0.00 0.00 0.00 2.66
172 173 3.133691 CTGACACAAGCTCAGCAAAGTA 58.866 45.455 0.00 0.00 0.00 2.24
173 174 3.540617 TGACACAAGCTCAGCAAAGTAA 58.459 40.909 0.00 0.00 0.00 2.24
174 175 4.136796 TGACACAAGCTCAGCAAAGTAAT 58.863 39.130 0.00 0.00 0.00 1.89
175 176 5.304778 TGACACAAGCTCAGCAAAGTAATA 58.695 37.500 0.00 0.00 0.00 0.98
176 177 5.939883 TGACACAAGCTCAGCAAAGTAATAT 59.060 36.000 0.00 0.00 0.00 1.28
177 178 6.430925 TGACACAAGCTCAGCAAAGTAATATT 59.569 34.615 0.00 0.00 0.00 1.28
178 179 7.040478 TGACACAAGCTCAGCAAAGTAATATTT 60.040 33.333 0.00 0.00 0.00 1.40
179 180 7.086376 ACACAAGCTCAGCAAAGTAATATTTG 58.914 34.615 0.00 0.00 42.00 2.32
180 181 7.086376 CACAAGCTCAGCAAAGTAATATTTGT 58.914 34.615 0.00 0.00 41.31 2.83
181 182 7.061441 CACAAGCTCAGCAAAGTAATATTTGTG 59.939 37.037 0.00 2.96 41.31 3.33
182 183 7.040478 ACAAGCTCAGCAAAGTAATATTTGTGA 60.040 33.333 0.00 3.75 41.31 3.58
183 184 7.636150 AGCTCAGCAAAGTAATATTTGTGAT 57.364 32.000 0.00 0.00 41.31 3.06
184 185 8.059798 AGCTCAGCAAAGTAATATTTGTGATT 57.940 30.769 0.00 0.00 41.31 2.57
185 186 8.526147 AGCTCAGCAAAGTAATATTTGTGATTT 58.474 29.630 0.00 0.00 41.31 2.17
186 187 8.589629 GCTCAGCAAAGTAATATTTGTGATTTG 58.410 33.333 0.00 0.60 41.31 2.32
187 188 8.984891 TCAGCAAAGTAATATTTGTGATTTGG 57.015 30.769 0.00 0.00 41.31 3.28
188 189 8.584157 TCAGCAAAGTAATATTTGTGATTTGGT 58.416 29.630 0.00 2.10 41.31 3.67
189 190 8.863049 CAGCAAAGTAATATTTGTGATTTGGTC 58.137 33.333 0.00 0.00 41.31 4.02
190 191 7.754924 AGCAAAGTAATATTTGTGATTTGGTCG 59.245 33.333 0.00 0.00 41.31 4.79
191 192 7.540745 GCAAAGTAATATTTGTGATTTGGTCGT 59.459 33.333 0.00 0.00 41.31 4.34
192 193 8.849490 CAAAGTAATATTTGTGATTTGGTCGTG 58.151 33.333 0.00 0.00 35.80 4.35
193 194 6.551736 AGTAATATTTGTGATTTGGTCGTGC 58.448 36.000 0.00 0.00 0.00 5.34
194 195 5.643379 AATATTTGTGATTTGGTCGTGCT 57.357 34.783 0.00 0.00 0.00 4.40
195 196 2.772568 TTTGTGATTTGGTCGTGCTG 57.227 45.000 0.00 0.00 0.00 4.41
196 197 0.950836 TTGTGATTTGGTCGTGCTGG 59.049 50.000 0.00 0.00 0.00 4.85
197 198 0.179032 TGTGATTTGGTCGTGCTGGT 60.179 50.000 0.00 0.00 0.00 4.00
198 199 1.070914 TGTGATTTGGTCGTGCTGGTA 59.929 47.619 0.00 0.00 0.00 3.25
199 200 1.732259 GTGATTTGGTCGTGCTGGTAG 59.268 52.381 0.00 0.00 0.00 3.18
200 201 0.727398 GATTTGGTCGTGCTGGTAGC 59.273 55.000 0.00 0.00 42.82 3.58
201 202 0.676782 ATTTGGTCGTGCTGGTAGCC 60.677 55.000 0.00 0.00 41.51 3.93
202 203 1.764571 TTTGGTCGTGCTGGTAGCCT 61.765 55.000 0.00 0.00 41.51 4.58
203 204 2.167398 TTGGTCGTGCTGGTAGCCTC 62.167 60.000 0.00 0.00 41.51 4.70
204 205 2.202623 GTCGTGCTGGTAGCCTCG 60.203 66.667 0.00 4.14 41.51 4.63
205 206 2.675423 TCGTGCTGGTAGCCTCGT 60.675 61.111 12.41 0.00 41.51 4.18
206 207 2.507102 CGTGCTGGTAGCCTCGTG 60.507 66.667 0.00 0.00 41.51 4.35
207 208 2.657237 GTGCTGGTAGCCTCGTGT 59.343 61.111 0.00 0.00 41.51 4.49
208 209 1.004918 GTGCTGGTAGCCTCGTGTT 60.005 57.895 0.00 0.00 41.51 3.32
209 210 1.005037 TGCTGGTAGCCTCGTGTTG 60.005 57.895 0.00 0.00 41.51 3.33
210 211 1.004918 GCTGGTAGCCTCGTGTTGT 60.005 57.895 0.00 0.00 34.48 3.32
211 212 0.602905 GCTGGTAGCCTCGTGTTGTT 60.603 55.000 0.00 0.00 34.48 2.83
212 213 1.148310 CTGGTAGCCTCGTGTTGTTG 58.852 55.000 0.00 0.00 0.00 3.33
213 214 0.466543 TGGTAGCCTCGTGTTGTTGT 59.533 50.000 0.00 0.00 0.00 3.32
214 215 1.687660 TGGTAGCCTCGTGTTGTTGTA 59.312 47.619 0.00 0.00 0.00 2.41
215 216 2.064014 GGTAGCCTCGTGTTGTTGTAC 58.936 52.381 0.00 0.00 0.00 2.90
216 217 2.288640 GGTAGCCTCGTGTTGTTGTACT 60.289 50.000 0.00 0.00 0.00 2.73
217 218 3.057315 GGTAGCCTCGTGTTGTTGTACTA 60.057 47.826 0.00 0.00 0.00 1.82
218 219 3.022607 AGCCTCGTGTTGTTGTACTAC 57.977 47.619 0.05 0.05 0.00 2.73
219 220 2.363038 AGCCTCGTGTTGTTGTACTACA 59.637 45.455 6.02 6.02 31.80 2.74
220 221 2.473984 GCCTCGTGTTGTTGTACTACAC 59.526 50.000 9.75 12.42 46.33 2.90
229 230 8.170999 GTGTTGTTGTACTACACTTAGCTATC 57.829 38.462 9.75 0.00 46.31 2.08
230 231 8.027771 GTGTTGTTGTACTACACTTAGCTATCT 58.972 37.037 9.75 0.00 46.31 1.98
231 232 8.582437 TGTTGTTGTACTACACTTAGCTATCTT 58.418 33.333 9.75 0.00 29.41 2.40
232 233 9.420551 GTTGTTGTACTACACTTAGCTATCTTT 57.579 33.333 9.75 0.00 0.00 2.52
233 234 9.991906 TTGTTGTACTACACTTAGCTATCTTTT 57.008 29.630 9.75 0.00 0.00 2.27
234 235 9.991906 TGTTGTACTACACTTAGCTATCTTTTT 57.008 29.630 6.02 0.00 0.00 1.94
236 237 9.991906 TTGTACTACACTTAGCTATCTTTTTGT 57.008 29.630 0.00 0.00 0.00 2.83
237 238 9.991906 TGTACTACACTTAGCTATCTTTTTGTT 57.008 29.630 0.00 0.00 0.00 2.83
239 240 8.324163 ACTACACTTAGCTATCTTTTTGTTGG 57.676 34.615 0.00 0.00 0.00 3.77
240 241 7.937394 ACTACACTTAGCTATCTTTTTGTTGGT 59.063 33.333 0.00 0.00 0.00 3.67
241 242 7.582667 ACACTTAGCTATCTTTTTGTTGGTT 57.417 32.000 0.00 0.00 0.00 3.67
242 243 8.007405 ACACTTAGCTATCTTTTTGTTGGTTT 57.993 30.769 0.00 0.00 0.00 3.27
243 244 8.474831 ACACTTAGCTATCTTTTTGTTGGTTTT 58.525 29.630 0.00 0.00 0.00 2.43
244 245 8.968242 CACTTAGCTATCTTTTTGTTGGTTTTC 58.032 33.333 0.00 0.00 0.00 2.29
245 246 8.691797 ACTTAGCTATCTTTTTGTTGGTTTTCA 58.308 29.630 0.00 0.00 0.00 2.69
246 247 9.185192 CTTAGCTATCTTTTTGTTGGTTTTCAG 57.815 33.333 0.00 0.00 0.00 3.02
247 248 6.515832 AGCTATCTTTTTGTTGGTTTTCAGG 58.484 36.000 0.00 0.00 0.00 3.86
248 249 6.098266 AGCTATCTTTTTGTTGGTTTTCAGGT 59.902 34.615 0.00 0.00 0.00 4.00
249 250 6.420903 GCTATCTTTTTGTTGGTTTTCAGGTC 59.579 38.462 0.00 0.00 0.00 3.85
250 251 5.993748 TCTTTTTGTTGGTTTTCAGGTCT 57.006 34.783 0.00 0.00 0.00 3.85
251 252 6.353404 TCTTTTTGTTGGTTTTCAGGTCTT 57.647 33.333 0.00 0.00 0.00 3.01
252 253 6.764379 TCTTTTTGTTGGTTTTCAGGTCTTT 58.236 32.000 0.00 0.00 0.00 2.52
253 254 7.220740 TCTTTTTGTTGGTTTTCAGGTCTTTT 58.779 30.769 0.00 0.00 0.00 2.27
254 255 7.717436 TCTTTTTGTTGGTTTTCAGGTCTTTTT 59.283 29.630 0.00 0.00 0.00 1.94
255 256 7.428282 TTTTGTTGGTTTTCAGGTCTTTTTC 57.572 32.000 0.00 0.00 0.00 2.29
256 257 5.730296 TGTTGGTTTTCAGGTCTTTTTCA 57.270 34.783 0.00 0.00 0.00 2.69
257 258 6.102897 TGTTGGTTTTCAGGTCTTTTTCAA 57.897 33.333 0.00 0.00 0.00 2.69
258 259 6.525629 TGTTGGTTTTCAGGTCTTTTTCAAA 58.474 32.000 0.00 0.00 0.00 2.69
259 260 6.648725 TGTTGGTTTTCAGGTCTTTTTCAAAG 59.351 34.615 0.00 0.00 0.00 2.77
260 261 5.729510 TGGTTTTCAGGTCTTTTTCAAAGG 58.270 37.500 0.00 0.00 0.00 3.11
261 262 5.116180 GGTTTTCAGGTCTTTTTCAAAGGG 58.884 41.667 0.00 0.00 0.00 3.95
262 263 5.338056 GGTTTTCAGGTCTTTTTCAAAGGGT 60.338 40.000 0.00 0.00 0.00 4.34
263 264 5.337578 TTTCAGGTCTTTTTCAAAGGGTG 57.662 39.130 0.00 0.00 0.00 4.61
264 265 3.976015 TCAGGTCTTTTTCAAAGGGTGT 58.024 40.909 0.00 0.00 0.00 4.16
265 266 3.699038 TCAGGTCTTTTTCAAAGGGTGTG 59.301 43.478 0.00 0.00 0.00 3.82
266 267 3.699038 CAGGTCTTTTTCAAAGGGTGTGA 59.301 43.478 0.00 0.00 0.00 3.58
267 268 3.699538 AGGTCTTTTTCAAAGGGTGTGAC 59.300 43.478 0.00 0.00 0.00 3.67
268 269 3.445805 GGTCTTTTTCAAAGGGTGTGACA 59.554 43.478 0.00 0.00 0.00 3.58
269 270 4.099419 GGTCTTTTTCAAAGGGTGTGACAT 59.901 41.667 0.00 0.00 0.00 3.06
270 271 5.281727 GTCTTTTTCAAAGGGTGTGACATC 58.718 41.667 0.00 0.00 0.00 3.06
271 272 5.067805 GTCTTTTTCAAAGGGTGTGACATCT 59.932 40.000 0.00 0.00 0.00 2.90
272 273 5.656416 TCTTTTTCAAAGGGTGTGACATCTT 59.344 36.000 0.00 0.00 0.00 2.40
273 274 5.930837 TTTTCAAAGGGTGTGACATCTTT 57.069 34.783 9.85 9.85 0.00 2.52
274 275 4.916983 TTCAAAGGGTGTGACATCTTTG 57.083 40.909 24.88 24.88 44.17 2.77
276 277 4.531854 TCAAAGGGTGTGACATCTTTGAA 58.468 39.130 28.05 18.63 46.57 2.69
277 278 4.580167 TCAAAGGGTGTGACATCTTTGAAG 59.420 41.667 28.05 14.20 46.57 3.02
278 279 3.146104 AGGGTGTGACATCTTTGAAGG 57.854 47.619 0.00 0.00 0.00 3.46
279 280 2.443255 AGGGTGTGACATCTTTGAAGGT 59.557 45.455 0.00 0.00 0.00 3.50
280 281 2.554032 GGGTGTGACATCTTTGAAGGTG 59.446 50.000 2.54 2.54 42.85 4.00
292 293 8.044060 CATCTTTGAAGGTGTATGCTTTAAGA 57.956 34.615 0.00 0.00 32.46 2.10
293 294 8.514594 CATCTTTGAAGGTGTATGCTTTAAGAA 58.485 33.333 0.00 0.00 32.46 2.52
294 295 7.871853 TCTTTGAAGGTGTATGCTTTAAGAAC 58.128 34.615 0.00 0.00 0.00 3.01
295 296 6.569179 TTGAAGGTGTATGCTTTAAGAACC 57.431 37.500 0.00 0.00 0.00 3.62
296 297 5.626142 TGAAGGTGTATGCTTTAAGAACCA 58.374 37.500 0.00 0.00 0.00 3.67
297 298 5.705441 TGAAGGTGTATGCTTTAAGAACCAG 59.295 40.000 0.00 0.00 0.00 4.00
298 299 4.010349 AGGTGTATGCTTTAAGAACCAGC 58.990 43.478 0.00 0.00 0.00 4.85
299 300 3.181510 GGTGTATGCTTTAAGAACCAGCG 60.182 47.826 0.00 0.00 36.24 5.18
300 301 3.435671 GTGTATGCTTTAAGAACCAGCGT 59.564 43.478 0.00 0.00 36.24 5.07
301 302 4.628333 GTGTATGCTTTAAGAACCAGCGTA 59.372 41.667 0.00 0.00 36.24 4.42
302 303 5.121142 GTGTATGCTTTAAGAACCAGCGTAA 59.879 40.000 0.00 0.00 36.90 3.18
303 304 5.878116 TGTATGCTTTAAGAACCAGCGTAAT 59.122 36.000 0.00 0.00 36.90 1.89
304 305 5.897377 ATGCTTTAAGAACCAGCGTAATT 57.103 34.783 0.00 0.00 36.24 1.40
305 306 5.699097 TGCTTTAAGAACCAGCGTAATTT 57.301 34.783 0.00 0.00 36.24 1.82
306 307 6.079424 TGCTTTAAGAACCAGCGTAATTTT 57.921 33.333 0.00 0.00 36.24 1.82
307 308 7.204496 TGCTTTAAGAACCAGCGTAATTTTA 57.796 32.000 0.00 0.00 36.24 1.52
308 309 7.302524 TGCTTTAAGAACCAGCGTAATTTTAG 58.697 34.615 0.00 0.00 36.24 1.85
309 310 7.173562 TGCTTTAAGAACCAGCGTAATTTTAGA 59.826 33.333 0.00 0.00 36.24 2.10
310 311 7.692705 GCTTTAAGAACCAGCGTAATTTTAGAG 59.307 37.037 0.00 0.00 0.00 2.43
311 312 5.547181 AAGAACCAGCGTAATTTTAGAGC 57.453 39.130 0.00 0.00 0.00 4.09
312 313 4.575885 AGAACCAGCGTAATTTTAGAGCA 58.424 39.130 0.00 0.00 0.00 4.26
313 314 4.631813 AGAACCAGCGTAATTTTAGAGCAG 59.368 41.667 0.00 0.00 0.00 4.24
314 315 2.678336 ACCAGCGTAATTTTAGAGCAGC 59.322 45.455 0.00 0.00 0.00 5.25
315 316 2.285834 CCAGCGTAATTTTAGAGCAGCG 60.286 50.000 0.00 0.00 0.00 5.18
316 317 2.603110 CAGCGTAATTTTAGAGCAGCGA 59.397 45.455 0.00 0.00 0.00 4.93
317 318 3.246226 CAGCGTAATTTTAGAGCAGCGAT 59.754 43.478 0.00 0.00 0.00 4.58
318 319 3.871594 AGCGTAATTTTAGAGCAGCGATT 59.128 39.130 0.00 0.00 0.00 3.34
319 320 4.332819 AGCGTAATTTTAGAGCAGCGATTT 59.667 37.500 0.00 0.00 0.00 2.17
320 321 5.522460 AGCGTAATTTTAGAGCAGCGATTTA 59.478 36.000 0.00 0.00 0.00 1.40
321 322 5.615982 GCGTAATTTTAGAGCAGCGATTTAC 59.384 40.000 0.00 0.00 0.00 2.01
322 323 6.701937 CGTAATTTTAGAGCAGCGATTTACA 58.298 36.000 0.00 0.00 0.00 2.41
323 324 7.345192 CGTAATTTTAGAGCAGCGATTTACAT 58.655 34.615 0.00 0.00 0.00 2.29
324 325 7.527516 CGTAATTTTAGAGCAGCGATTTACATC 59.472 37.037 0.00 0.00 0.00 3.06
325 326 7.559590 AATTTTAGAGCAGCGATTTACATCT 57.440 32.000 0.00 0.00 0.00 2.90
326 327 6.589830 TTTTAGAGCAGCGATTTACATCTC 57.410 37.500 0.00 0.00 0.00 2.75
327 328 3.104843 AGAGCAGCGATTTACATCTCC 57.895 47.619 0.00 0.00 0.00 3.71
328 329 2.697751 AGAGCAGCGATTTACATCTCCT 59.302 45.455 0.00 0.00 0.00 3.69
329 330 3.891977 AGAGCAGCGATTTACATCTCCTA 59.108 43.478 0.00 0.00 0.00 2.94
330 331 4.526262 AGAGCAGCGATTTACATCTCCTAT 59.474 41.667 0.00 0.00 0.00 2.57
331 332 5.011533 AGAGCAGCGATTTACATCTCCTATT 59.988 40.000 0.00 0.00 0.00 1.73
332 333 5.615289 AGCAGCGATTTACATCTCCTATTT 58.385 37.500 0.00 0.00 0.00 1.40
333 334 6.759272 AGCAGCGATTTACATCTCCTATTTA 58.241 36.000 0.00 0.00 0.00 1.40
334 335 7.390027 AGCAGCGATTTACATCTCCTATTTAT 58.610 34.615 0.00 0.00 0.00 1.40
335 336 7.332926 AGCAGCGATTTACATCTCCTATTTATG 59.667 37.037 0.00 0.00 0.00 1.90
336 337 7.118390 GCAGCGATTTACATCTCCTATTTATGT 59.882 37.037 0.00 0.00 37.58 2.29
337 338 8.993121 CAGCGATTTACATCTCCTATTTATGTT 58.007 33.333 0.00 0.00 35.54 2.71
338 339 9.561069 AGCGATTTACATCTCCTATTTATGTTT 57.439 29.630 0.00 0.00 35.54 2.83
346 347 8.408601 ACATCTCCTATTTATGTTTTCATGTGC 58.591 33.333 0.00 0.00 41.09 4.57
347 348 7.936496 TCTCCTATTTATGTTTTCATGTGCA 57.064 32.000 0.00 0.00 41.09 4.57
348 349 7.761409 TCTCCTATTTATGTTTTCATGTGCAC 58.239 34.615 10.75 10.75 41.09 4.57
349 350 6.550843 TCCTATTTATGTTTTCATGTGCACG 58.449 36.000 13.13 0.00 41.09 5.34
350 351 5.743398 CCTATTTATGTTTTCATGTGCACGG 59.257 40.000 13.13 7.20 41.09 4.94
351 352 4.576216 TTTATGTTTTCATGTGCACGGT 57.424 36.364 13.13 0.00 41.09 4.83
352 353 2.704725 ATGTTTTCATGTGCACGGTC 57.295 45.000 13.13 0.00 39.30 4.79
353 354 1.383523 TGTTTTCATGTGCACGGTCA 58.616 45.000 13.13 0.00 0.00 4.02
354 355 1.745653 TGTTTTCATGTGCACGGTCAA 59.254 42.857 13.13 0.00 0.00 3.18
355 356 2.116366 GTTTTCATGTGCACGGTCAAC 58.884 47.619 13.13 7.58 0.00 3.18
356 357 1.383523 TTTCATGTGCACGGTCAACA 58.616 45.000 13.13 0.00 0.00 3.33
434 436 5.002464 TCCCTAGCACTTGTAAACGATAC 57.998 43.478 0.00 0.00 0.00 2.24
653 681 4.742201 GCAGCCGTCTTCCTCGCA 62.742 66.667 0.00 0.00 0.00 5.10
699 727 0.690192 TCTGGGAAATCAACGAGCCA 59.310 50.000 0.00 0.00 0.00 4.75
963 1012 1.743252 GCCAAGAACCAGGAGCTCG 60.743 63.158 7.83 0.00 0.00 5.03
990 1039 1.977594 ATAAAAGCGCTTGCGGTCGG 61.978 55.000 25.80 0.00 45.69 4.79
1002 1051 4.137872 GGTCGGGTCGCCGATGAA 62.138 66.667 7.44 0.00 44.10 2.57
1003 1052 2.106332 GTCGGGTCGCCGATGAAT 59.894 61.111 7.44 0.00 44.10 2.57
1004 1053 1.361271 GTCGGGTCGCCGATGAATA 59.639 57.895 7.44 0.00 44.10 1.75
1005 1054 0.249155 GTCGGGTCGCCGATGAATAA 60.249 55.000 7.44 0.00 44.10 1.40
1006 1055 0.460722 TCGGGTCGCCGATGAATAAA 59.539 50.000 0.00 0.00 37.29 1.40
1007 1056 1.134759 TCGGGTCGCCGATGAATAAAA 60.135 47.619 0.00 0.00 37.29 1.52
1008 1057 1.260561 CGGGTCGCCGATGAATAAAAG 59.739 52.381 0.00 0.00 34.88 2.27
1009 1058 1.002792 GGGTCGCCGATGAATAAAAGC 60.003 52.381 0.00 0.00 0.00 3.51
1010 1059 1.332904 GGTCGCCGATGAATAAAAGCG 60.333 52.381 0.00 0.00 44.61 4.68
1011 1060 0.303493 TCGCCGATGAATAAAAGCGC 59.697 50.000 0.00 0.00 43.05 5.92
1012 1061 0.304705 CGCCGATGAATAAAAGCGCT 59.695 50.000 2.64 2.64 36.89 5.92
1013 1062 1.268032 CGCCGATGAATAAAAGCGCTT 60.268 47.619 18.98 18.98 36.89 4.68
1014 1063 2.111756 GCCGATGAATAAAAGCGCTTG 58.888 47.619 25.80 7.96 0.00 4.01
1015 1064 2.111756 CCGATGAATAAAAGCGCTTGC 58.888 47.619 25.80 11.41 39.58 4.01
1016 1065 1.769622 CGATGAATAAAAGCGCTTGCG 59.230 47.619 25.80 10.90 45.69 4.85
1017 1066 2.111756 GATGAATAAAAGCGCTTGCGG 58.888 47.619 25.80 0.00 45.69 5.69
1018 1067 0.878416 TGAATAAAAGCGCTTGCGGT 59.122 45.000 25.80 14.02 45.69 5.68
1019 1068 1.135803 TGAATAAAAGCGCTTGCGGTC 60.136 47.619 25.80 18.55 45.69 4.79
2213 3821 3.967987 ACATCCATACCTGGTCCTAAGTC 59.032 47.826 0.63 0.00 43.61 3.01
2303 3914 4.458989 GGAAACTCATGTACTGCAATTCCA 59.541 41.667 0.00 0.00 33.29 3.53
2319 3930 2.031516 CCAGCACAAGACAGAGCGG 61.032 63.158 0.00 0.00 0.00 5.52
2508 4124 2.591715 GCACTGGCGTCTTGGTGT 60.592 61.111 9.26 0.00 32.90 4.16
2722 5297 6.818644 CCTTAAAACATTCTGCTGCTCTAGTA 59.181 38.462 0.00 0.00 0.00 1.82
2760 5335 1.605710 GGCACAGATCCAATGGATTCG 59.394 52.381 16.90 12.60 43.27 3.34
2955 5820 1.134848 TGCACCAAAGAAGCAACCAAC 60.135 47.619 0.00 0.00 34.97 3.77
3019 5890 4.084287 AGTCCTCAATGTACCGAGTAACA 58.916 43.478 0.00 0.00 0.00 2.41
3021 5892 5.011329 AGTCCTCAATGTACCGAGTAACAAA 59.989 40.000 0.00 0.00 0.00 2.83
3095 5969 3.944015 GGCAGAGCATTTGAGTAATCTGT 59.056 43.478 0.00 0.00 0.00 3.41
3096 5970 4.201891 GGCAGAGCATTTGAGTAATCTGTG 60.202 45.833 0.00 0.00 0.00 3.66
3097 5971 4.394300 GCAGAGCATTTGAGTAATCTGTGT 59.606 41.667 0.00 0.00 0.00 3.72
3098 5972 5.106396 GCAGAGCATTTGAGTAATCTGTGTT 60.106 40.000 0.00 0.00 0.00 3.32
3099 5973 6.541086 CAGAGCATTTGAGTAATCTGTGTTC 58.459 40.000 0.00 0.00 0.00 3.18
3100 5974 6.370994 CAGAGCATTTGAGTAATCTGTGTTCT 59.629 38.462 0.00 0.00 0.00 3.01
3101 5975 6.593382 AGAGCATTTGAGTAATCTGTGTTCTC 59.407 38.462 0.00 0.00 0.00 2.87
3102 5976 5.645497 AGCATTTGAGTAATCTGTGTTCTCC 59.355 40.000 0.00 0.00 0.00 3.71
3103 5977 5.412594 GCATTTGAGTAATCTGTGTTCTCCA 59.587 40.000 0.00 0.00 0.00 3.86
3104 5978 6.094603 GCATTTGAGTAATCTGTGTTCTCCAT 59.905 38.462 0.00 0.00 0.00 3.41
3105 5979 7.362401 GCATTTGAGTAATCTGTGTTCTCCATT 60.362 37.037 0.00 0.00 0.00 3.16
3106 5980 8.517878 CATTTGAGTAATCTGTGTTCTCCATTT 58.482 33.333 0.00 0.00 0.00 2.32
3107 5981 7.672983 TTGAGTAATCTGTGTTCTCCATTTC 57.327 36.000 0.00 0.00 0.00 2.17
3108 5982 7.009179 TGAGTAATCTGTGTTCTCCATTTCT 57.991 36.000 0.00 0.00 0.00 2.52
3109 5983 7.099764 TGAGTAATCTGTGTTCTCCATTTCTC 58.900 38.462 0.00 0.00 0.00 2.87
3110 5984 7.038729 TGAGTAATCTGTGTTCTCCATTTCTCT 60.039 37.037 0.00 0.00 0.00 3.10
3111 5985 7.684529 AGTAATCTGTGTTCTCCATTTCTCTT 58.315 34.615 0.00 0.00 0.00 2.85
3112 5986 8.160106 AGTAATCTGTGTTCTCCATTTCTCTTT 58.840 33.333 0.00 0.00 0.00 2.52
3113 5987 9.436957 GTAATCTGTGTTCTCCATTTCTCTTTA 57.563 33.333 0.00 0.00 0.00 1.85
3114 5988 8.924511 AATCTGTGTTCTCCATTTCTCTTTAA 57.075 30.769 0.00 0.00 0.00 1.52
3115 5989 8.924511 ATCTGTGTTCTCCATTTCTCTTTAAA 57.075 30.769 0.00 0.00 0.00 1.52
3116 5990 8.746052 TCTGTGTTCTCCATTTCTCTTTAAAA 57.254 30.769 0.00 0.00 0.00 1.52
3117 5991 8.840321 TCTGTGTTCTCCATTTCTCTTTAAAAG 58.160 33.333 0.00 0.00 0.00 2.27
3118 5992 7.425606 TGTGTTCTCCATTTCTCTTTAAAAGC 58.574 34.615 0.00 0.00 0.00 3.51
3119 5993 7.068103 TGTGTTCTCCATTTCTCTTTAAAAGCA 59.932 33.333 0.00 0.00 0.00 3.91
3120 5994 8.084684 GTGTTCTCCATTTCTCTTTAAAAGCAT 58.915 33.333 0.00 0.00 0.00 3.79
3121 5995 8.084073 TGTTCTCCATTTCTCTTTAAAAGCATG 58.916 33.333 0.00 0.00 0.00 4.06
3122 5996 6.624423 TCTCCATTTCTCTTTAAAAGCATGC 58.376 36.000 10.51 10.51 0.00 4.06
3123 5997 6.209192 TCTCCATTTCTCTTTAAAAGCATGCA 59.791 34.615 21.98 0.00 0.00 3.96
3124 5998 6.392354 TCCATTTCTCTTTAAAAGCATGCAG 58.608 36.000 21.98 7.33 0.00 4.41
3125 5999 6.209192 TCCATTTCTCTTTAAAAGCATGCAGA 59.791 34.615 21.98 11.60 0.00 4.26
3126 6000 6.869913 CCATTTCTCTTTAAAAGCATGCAGAA 59.130 34.615 21.98 14.06 0.00 3.02
3127 6001 7.385752 CCATTTCTCTTTAAAAGCATGCAGAAA 59.614 33.333 21.98 21.29 33.59 2.52
3128 6002 8.767085 CATTTCTCTTTAAAAGCATGCAGAAAA 58.233 29.630 21.98 12.95 33.13 2.29
3129 6003 8.891671 TTTCTCTTTAAAAGCATGCAGAAAAT 57.108 26.923 21.98 2.09 29.06 1.82
3130 6004 8.524870 TTCTCTTTAAAAGCATGCAGAAAATC 57.475 30.769 21.98 0.00 0.00 2.17
3131 6005 7.092716 TCTCTTTAAAAGCATGCAGAAAATCC 58.907 34.615 21.98 0.00 0.00 3.01
3132 6006 6.757237 TCTTTAAAAGCATGCAGAAAATCCA 58.243 32.000 21.98 0.00 0.00 3.41
3133 6007 7.388437 TCTTTAAAAGCATGCAGAAAATCCAT 58.612 30.769 21.98 0.00 0.00 3.41
3134 6008 8.530311 TCTTTAAAAGCATGCAGAAAATCCATA 58.470 29.630 21.98 0.00 0.00 2.74
3135 6009 8.477984 TTTAAAAGCATGCAGAAAATCCATAC 57.522 30.769 21.98 0.00 0.00 2.39
3136 6010 4.660789 AAGCATGCAGAAAATCCATACC 57.339 40.909 21.98 0.00 0.00 2.73
3137 6011 2.961062 AGCATGCAGAAAATCCATACCC 59.039 45.455 21.98 0.00 0.00 3.69
3138 6012 2.961062 GCATGCAGAAAATCCATACCCT 59.039 45.455 14.21 0.00 0.00 4.34
3139 6013 3.243636 GCATGCAGAAAATCCATACCCTG 60.244 47.826 14.21 0.00 0.00 4.45
3140 6014 4.209538 CATGCAGAAAATCCATACCCTGA 58.790 43.478 0.00 0.00 0.00 3.86
3141 6015 4.524802 TGCAGAAAATCCATACCCTGAT 57.475 40.909 0.00 0.00 0.00 2.90
3142 6016 4.870636 TGCAGAAAATCCATACCCTGATT 58.129 39.130 0.00 0.00 32.72 2.57
3143 6017 5.271598 TGCAGAAAATCCATACCCTGATTT 58.728 37.500 0.00 0.00 41.63 2.17
3172 6046 4.412060 AAAAATCCATTCCCTGGTACCA 57.588 40.909 15.39 15.39 46.08 3.25
3173 6047 4.412060 AAAATCCATTCCCTGGTACCAA 57.588 40.909 17.11 0.39 46.08 3.67
3174 6048 4.412060 AAATCCATTCCCTGGTACCAAA 57.588 40.909 17.11 8.07 46.08 3.28
3175 6049 4.412060 AATCCATTCCCTGGTACCAAAA 57.588 40.909 17.11 10.95 46.08 2.44
3176 6050 3.163616 TCCATTCCCTGGTACCAAAAC 57.836 47.619 17.11 0.00 46.08 2.43
3177 6051 2.176045 CCATTCCCTGGTACCAAAACC 58.824 52.381 17.11 0.00 40.49 3.27
3187 6061 4.929479 TGGTACCAAAACCATATTGCTCT 58.071 39.130 13.60 0.00 44.68 4.09
3188 6062 6.068461 TGGTACCAAAACCATATTGCTCTA 57.932 37.500 13.60 0.00 44.68 2.43
3189 6063 6.119536 TGGTACCAAAACCATATTGCTCTAG 58.880 40.000 13.60 0.00 44.68 2.43
3190 6064 6.069905 TGGTACCAAAACCATATTGCTCTAGA 60.070 38.462 13.60 0.00 44.68 2.43
3191 6065 6.998673 GGTACCAAAACCATATTGCTCTAGAT 59.001 38.462 7.15 0.00 39.50 1.98
3192 6066 7.502561 GGTACCAAAACCATATTGCTCTAGATT 59.497 37.037 7.15 0.00 39.50 2.40
3193 6067 7.961326 ACCAAAACCATATTGCTCTAGATTT 57.039 32.000 0.00 0.00 0.00 2.17
3195 6069 8.903820 ACCAAAACCATATTGCTCTAGATTTAC 58.096 33.333 0.00 0.00 0.00 2.01
3196 6070 8.902806 CCAAAACCATATTGCTCTAGATTTACA 58.097 33.333 0.00 0.00 0.00 2.41
3197 6071 9.941664 CAAAACCATATTGCTCTAGATTTACAG 57.058 33.333 0.00 0.00 0.00 2.74
3198 6072 9.686683 AAAACCATATTGCTCTAGATTTACAGT 57.313 29.630 0.00 0.00 0.00 3.55
3199 6073 9.686683 AAACCATATTGCTCTAGATTTACAGTT 57.313 29.630 0.00 0.00 0.00 3.16
3200 6074 9.686683 AACCATATTGCTCTAGATTTACAGTTT 57.313 29.630 0.00 0.00 0.00 2.66
3201 6075 9.686683 ACCATATTGCTCTAGATTTACAGTTTT 57.313 29.630 0.00 0.00 0.00 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.380444 GGCGTTCAAATCTTCAGCCAATTA 60.380 41.667 0.00 0.00 42.37 1.40
2 3 3.578688 GCGTTCAAATCTTCAGCCAATT 58.421 40.909 0.00 0.00 0.00 2.32
3 4 2.094545 GGCGTTCAAATCTTCAGCCAAT 60.095 45.455 0.00 0.00 42.37 3.16
5 6 0.881118 GGCGTTCAAATCTTCAGCCA 59.119 50.000 0.00 0.00 42.37 4.75
6 7 0.171231 GGGCGTTCAAATCTTCAGCC 59.829 55.000 0.00 0.00 42.10 4.85
7 8 0.179189 CGGGCGTTCAAATCTTCAGC 60.179 55.000 0.00 0.00 0.00 4.26
8 9 1.394917 CTCGGGCGTTCAAATCTTCAG 59.605 52.381 0.00 0.00 0.00 3.02
9 10 1.001520 TCTCGGGCGTTCAAATCTTCA 59.998 47.619 0.00 0.00 0.00 3.02
10 11 1.722011 TCTCGGGCGTTCAAATCTTC 58.278 50.000 0.00 0.00 0.00 2.87
11 12 2.178912 TTCTCGGGCGTTCAAATCTT 57.821 45.000 0.00 0.00 0.00 2.40
12 13 1.804748 GTTTCTCGGGCGTTCAAATCT 59.195 47.619 0.00 0.00 0.00 2.40
13 14 1.804748 AGTTTCTCGGGCGTTCAAATC 59.195 47.619 0.00 0.00 0.00 2.17
14 15 1.892209 AGTTTCTCGGGCGTTCAAAT 58.108 45.000 0.00 0.00 0.00 2.32
15 16 1.670791 AAGTTTCTCGGGCGTTCAAA 58.329 45.000 0.00 0.00 0.00 2.69
16 17 2.529780 TAAGTTTCTCGGGCGTTCAA 57.470 45.000 0.00 0.00 0.00 2.69
17 18 2.289195 ACATAAGTTTCTCGGGCGTTCA 60.289 45.455 0.00 0.00 0.00 3.18
18 19 2.344025 ACATAAGTTTCTCGGGCGTTC 58.656 47.619 0.00 0.00 0.00 3.95
19 20 2.467566 ACATAAGTTTCTCGGGCGTT 57.532 45.000 0.00 0.00 0.00 4.84
20 21 2.467566 AACATAAGTTTCTCGGGCGT 57.532 45.000 0.00 0.00 33.11 5.68
21 22 2.727916 GCAAACATAAGTTTCTCGGGCG 60.728 50.000 0.00 0.00 45.80 6.13
22 23 2.488153 AGCAAACATAAGTTTCTCGGGC 59.512 45.455 0.00 0.00 45.80 6.13
23 24 4.003648 AGAGCAAACATAAGTTTCTCGGG 58.996 43.478 12.82 0.00 45.80 5.14
24 25 4.452455 ACAGAGCAAACATAAGTTTCTCGG 59.548 41.667 14.76 14.76 45.80 4.63
25 26 5.597813 ACAGAGCAAACATAAGTTTCTCG 57.402 39.130 12.82 11.23 45.80 4.04
26 27 7.915397 TGAAAACAGAGCAAACATAAGTTTCTC 59.085 33.333 11.66 11.66 45.80 2.87
27 28 7.771183 TGAAAACAGAGCAAACATAAGTTTCT 58.229 30.769 0.00 0.00 45.80 2.52
28 29 7.985634 TGAAAACAGAGCAAACATAAGTTTC 57.014 32.000 0.00 0.00 45.80 2.78
30 31 8.947055 AAATGAAAACAGAGCAAACATAAGTT 57.053 26.923 0.00 0.00 40.40 2.66
31 32 8.416329 AGAAATGAAAACAGAGCAAACATAAGT 58.584 29.630 0.00 0.00 0.00 2.24
32 33 8.697067 CAGAAATGAAAACAGAGCAAACATAAG 58.303 33.333 0.00 0.00 0.00 1.73
33 34 8.196771 ACAGAAATGAAAACAGAGCAAACATAA 58.803 29.630 0.00 0.00 0.00 1.90
34 35 7.715657 ACAGAAATGAAAACAGAGCAAACATA 58.284 30.769 0.00 0.00 0.00 2.29
35 36 6.576185 ACAGAAATGAAAACAGAGCAAACAT 58.424 32.000 0.00 0.00 0.00 2.71
36 37 5.964758 ACAGAAATGAAAACAGAGCAAACA 58.035 33.333 0.00 0.00 0.00 2.83
37 38 6.237915 CCAACAGAAATGAAAACAGAGCAAAC 60.238 38.462 0.00 0.00 0.00 2.93
38 39 5.811613 CCAACAGAAATGAAAACAGAGCAAA 59.188 36.000 0.00 0.00 0.00 3.68
39 40 5.105392 ACCAACAGAAATGAAAACAGAGCAA 60.105 36.000 0.00 0.00 0.00 3.91
40 41 4.402155 ACCAACAGAAATGAAAACAGAGCA 59.598 37.500 0.00 0.00 0.00 4.26
41 42 4.936891 ACCAACAGAAATGAAAACAGAGC 58.063 39.130 0.00 0.00 0.00 4.09
42 43 6.145535 GCTACCAACAGAAATGAAAACAGAG 58.854 40.000 0.00 0.00 0.00 3.35
43 44 5.592282 TGCTACCAACAGAAATGAAAACAGA 59.408 36.000 0.00 0.00 0.00 3.41
44 45 5.830912 TGCTACCAACAGAAATGAAAACAG 58.169 37.500 0.00 0.00 0.00 3.16
45 46 5.843673 TGCTACCAACAGAAATGAAAACA 57.156 34.783 0.00 0.00 0.00 2.83
46 47 8.082242 ACTAATGCTACCAACAGAAATGAAAAC 58.918 33.333 0.00 0.00 0.00 2.43
47 48 8.081633 CACTAATGCTACCAACAGAAATGAAAA 58.918 33.333 0.00 0.00 0.00 2.29
48 49 7.592938 CACTAATGCTACCAACAGAAATGAAA 58.407 34.615 0.00 0.00 0.00 2.69
49 50 7.144722 CACTAATGCTACCAACAGAAATGAA 57.855 36.000 0.00 0.00 0.00 2.57
50 51 6.741992 CACTAATGCTACCAACAGAAATGA 57.258 37.500 0.00 0.00 0.00 2.57
65 66 5.979517 ACAACTCTTTGAAAAGCACTAATGC 59.020 36.000 0.00 0.00 43.17 3.56
66 67 7.992180 AACAACTCTTTGAAAAGCACTAATG 57.008 32.000 0.00 0.00 36.48 1.90
67 68 8.470002 AGAAACAACTCTTTGAAAAGCACTAAT 58.530 29.630 0.00 0.00 36.48 1.73
68 69 7.826690 AGAAACAACTCTTTGAAAAGCACTAA 58.173 30.769 0.00 0.00 36.48 2.24
69 70 7.391148 AGAAACAACTCTTTGAAAAGCACTA 57.609 32.000 0.00 0.00 36.48 2.74
70 71 6.272822 AGAAACAACTCTTTGAAAAGCACT 57.727 33.333 0.00 0.00 36.48 4.40
71 72 6.951256 AAGAAACAACTCTTTGAAAAGCAC 57.049 33.333 0.00 0.00 36.48 4.40
72 73 7.033185 GGTAAGAAACAACTCTTTGAAAAGCA 58.967 34.615 0.00 0.00 36.95 3.91
73 74 7.033185 TGGTAAGAAACAACTCTTTGAAAAGC 58.967 34.615 0.00 0.00 36.95 3.51
74 75 8.860128 GTTGGTAAGAAACAACTCTTTGAAAAG 58.140 33.333 0.00 0.00 42.67 2.27
75 76 8.361139 TGTTGGTAAGAAACAACTCTTTGAAAA 58.639 29.630 7.71 0.00 45.36 2.29
76 77 7.887381 TGTTGGTAAGAAACAACTCTTTGAAA 58.113 30.769 7.71 0.00 45.36 2.69
77 78 7.362574 CCTGTTGGTAAGAAACAACTCTTTGAA 60.363 37.037 7.71 0.00 45.36 2.69
78 79 6.094881 CCTGTTGGTAAGAAACAACTCTTTGA 59.905 38.462 7.71 0.00 45.36 2.69
79 80 6.265577 CCTGTTGGTAAGAAACAACTCTTTG 58.734 40.000 7.71 0.00 45.36 2.77
80 81 5.359860 CCCTGTTGGTAAGAAACAACTCTTT 59.640 40.000 7.71 0.00 45.36 2.52
81 82 4.887655 CCCTGTTGGTAAGAAACAACTCTT 59.112 41.667 7.71 0.00 45.36 2.85
82 83 4.165372 TCCCTGTTGGTAAGAAACAACTCT 59.835 41.667 7.71 0.00 45.36 3.24
83 84 4.457466 TCCCTGTTGGTAAGAAACAACTC 58.543 43.478 7.71 0.00 45.36 3.01
84 85 4.461198 CTCCCTGTTGGTAAGAAACAACT 58.539 43.478 7.71 0.00 45.36 3.16
85 86 3.568430 CCTCCCTGTTGGTAAGAAACAAC 59.432 47.826 0.00 0.00 45.35 3.32
86 87 3.203487 ACCTCCCTGTTGGTAAGAAACAA 59.797 43.478 0.00 0.00 37.10 2.83
87 88 2.781174 ACCTCCCTGTTGGTAAGAAACA 59.219 45.455 0.00 0.00 36.19 2.83
88 89 3.503800 ACCTCCCTGTTGGTAAGAAAC 57.496 47.619 0.00 0.00 34.36 2.78
89 90 3.827722 CAACCTCCCTGTTGGTAAGAAA 58.172 45.455 0.00 0.00 41.49 2.52
90 91 3.502123 CAACCTCCCTGTTGGTAAGAA 57.498 47.619 0.00 0.00 41.49 2.52
97 98 2.260869 CGCACCAACCTCCCTGTTG 61.261 63.158 0.00 0.00 44.12 3.33
98 99 2.113139 CGCACCAACCTCCCTGTT 59.887 61.111 0.00 0.00 0.00 3.16
99 100 3.168528 ACGCACCAACCTCCCTGT 61.169 61.111 0.00 0.00 0.00 4.00
100 101 2.669569 CACGCACCAACCTCCCTG 60.670 66.667 0.00 0.00 0.00 4.45
101 102 2.847234 TCACGCACCAACCTCCCT 60.847 61.111 0.00 0.00 0.00 4.20
102 103 2.358737 CTCACGCACCAACCTCCC 60.359 66.667 0.00 0.00 0.00 4.30
103 104 2.185310 ATCCTCACGCACCAACCTCC 62.185 60.000 0.00 0.00 0.00 4.30
104 105 1.021390 CATCCTCACGCACCAACCTC 61.021 60.000 0.00 0.00 0.00 3.85
105 106 1.003355 CATCCTCACGCACCAACCT 60.003 57.895 0.00 0.00 0.00 3.50
106 107 0.889186 AACATCCTCACGCACCAACC 60.889 55.000 0.00 0.00 0.00 3.77
107 108 0.238289 CAACATCCTCACGCACCAAC 59.762 55.000 0.00 0.00 0.00 3.77
108 109 0.179032 ACAACATCCTCACGCACCAA 60.179 50.000 0.00 0.00 0.00 3.67
109 110 0.682292 TACAACATCCTCACGCACCA 59.318 50.000 0.00 0.00 0.00 4.17
110 111 2.024176 ATACAACATCCTCACGCACC 57.976 50.000 0.00 0.00 0.00 5.01
111 112 4.181578 ACTAATACAACATCCTCACGCAC 58.818 43.478 0.00 0.00 0.00 5.34
112 113 4.465632 ACTAATACAACATCCTCACGCA 57.534 40.909 0.00 0.00 0.00 5.24
113 114 5.796350 AAACTAATACAACATCCTCACGC 57.204 39.130 0.00 0.00 0.00 5.34
114 115 8.755941 CATCTAAACTAATACAACATCCTCACG 58.244 37.037 0.00 0.00 0.00 4.35
115 116 8.552034 GCATCTAAACTAATACAACATCCTCAC 58.448 37.037 0.00 0.00 0.00 3.51
116 117 8.486210 AGCATCTAAACTAATACAACATCCTCA 58.514 33.333 0.00 0.00 0.00 3.86
117 118 8.894768 AGCATCTAAACTAATACAACATCCTC 57.105 34.615 0.00 0.00 0.00 3.71
118 119 9.686683 AAAGCATCTAAACTAATACAACATCCT 57.313 29.630 0.00 0.00 0.00 3.24
119 120 9.937175 GAAAGCATCTAAACTAATACAACATCC 57.063 33.333 0.00 0.00 0.00 3.51
130 131 9.190317 TGTCAGATCTAGAAAGCATCTAAACTA 57.810 33.333 0.00 0.00 40.12 2.24
131 132 7.978975 GTGTCAGATCTAGAAAGCATCTAAACT 59.021 37.037 0.00 0.00 40.12 2.66
132 133 7.761704 TGTGTCAGATCTAGAAAGCATCTAAAC 59.238 37.037 0.00 0.00 40.12 2.01
133 134 7.840931 TGTGTCAGATCTAGAAAGCATCTAAA 58.159 34.615 0.00 0.00 40.12 1.85
134 135 7.410120 TGTGTCAGATCTAGAAAGCATCTAA 57.590 36.000 0.00 0.00 40.12 2.10
135 136 7.410120 TTGTGTCAGATCTAGAAAGCATCTA 57.590 36.000 0.00 0.00 39.71 1.98
136 137 5.929058 TGTGTCAGATCTAGAAAGCATCT 57.071 39.130 0.00 0.00 42.48 2.90
137 138 5.006552 GCTTGTGTCAGATCTAGAAAGCATC 59.993 44.000 13.93 0.29 38.84 3.91
138 139 4.874966 GCTTGTGTCAGATCTAGAAAGCAT 59.125 41.667 13.93 0.00 38.84 3.79
139 140 4.020751 AGCTTGTGTCAGATCTAGAAAGCA 60.021 41.667 18.75 3.85 40.88 3.91
140 141 4.502962 AGCTTGTGTCAGATCTAGAAAGC 58.497 43.478 11.78 11.78 39.19 3.51
141 142 5.718146 TGAGCTTGTGTCAGATCTAGAAAG 58.282 41.667 0.00 0.00 30.04 2.62
142 143 5.718146 CTGAGCTTGTGTCAGATCTAGAAA 58.282 41.667 0.00 0.00 43.65 2.52
143 144 4.381398 GCTGAGCTTGTGTCAGATCTAGAA 60.381 45.833 0.00 0.00 43.65 2.10
144 145 3.130164 GCTGAGCTTGTGTCAGATCTAGA 59.870 47.826 0.00 0.00 43.65 2.43
145 146 3.119209 TGCTGAGCTTGTGTCAGATCTAG 60.119 47.826 5.83 0.00 43.65 2.43
146 147 2.827921 TGCTGAGCTTGTGTCAGATCTA 59.172 45.455 5.83 0.00 43.65 1.98
147 148 1.622312 TGCTGAGCTTGTGTCAGATCT 59.378 47.619 5.83 0.00 43.65 2.75
148 149 2.090400 TGCTGAGCTTGTGTCAGATC 57.910 50.000 5.83 0.00 43.65 2.75
149 150 2.556144 TTGCTGAGCTTGTGTCAGAT 57.444 45.000 5.83 0.00 43.65 2.90
150 151 2.216046 CTTTGCTGAGCTTGTGTCAGA 58.784 47.619 5.83 0.00 43.65 3.27
151 152 1.945394 ACTTTGCTGAGCTTGTGTCAG 59.055 47.619 5.83 0.00 43.77 3.51
152 153 2.042686 ACTTTGCTGAGCTTGTGTCA 57.957 45.000 5.83 0.00 0.00 3.58
153 154 4.756084 ATTACTTTGCTGAGCTTGTGTC 57.244 40.909 5.83 0.00 0.00 3.67
154 155 6.824305 AATATTACTTTGCTGAGCTTGTGT 57.176 33.333 5.83 2.24 0.00 3.72
155 156 7.061441 CACAAATATTACTTTGCTGAGCTTGTG 59.939 37.037 5.83 9.93 39.26 3.33
156 157 7.040478 TCACAAATATTACTTTGCTGAGCTTGT 60.040 33.333 5.83 4.45 39.26 3.16
157 158 7.307694 TCACAAATATTACTTTGCTGAGCTTG 58.692 34.615 5.83 0.00 39.26 4.01
158 159 7.452880 TCACAAATATTACTTTGCTGAGCTT 57.547 32.000 5.83 0.00 39.26 3.74
159 160 7.636150 ATCACAAATATTACTTTGCTGAGCT 57.364 32.000 5.83 0.00 39.26 4.09
160 161 8.589629 CAAATCACAAATATTACTTTGCTGAGC 58.410 33.333 0.00 0.00 39.26 4.26
161 162 9.079833 CCAAATCACAAATATTACTTTGCTGAG 57.920 33.333 0.00 0.00 39.26 3.35
162 163 8.584157 ACCAAATCACAAATATTACTTTGCTGA 58.416 29.630 0.00 0.00 39.26 4.26
163 164 8.761575 ACCAAATCACAAATATTACTTTGCTG 57.238 30.769 0.00 0.00 39.26 4.41
164 165 7.754924 CGACCAAATCACAAATATTACTTTGCT 59.245 33.333 0.00 0.00 39.26 3.91
165 166 7.540745 ACGACCAAATCACAAATATTACTTTGC 59.459 33.333 0.00 0.00 39.26 3.68
166 167 8.849490 CACGACCAAATCACAAATATTACTTTG 58.151 33.333 0.00 0.00 41.02 2.77
167 168 7.540745 GCACGACCAAATCACAAATATTACTTT 59.459 33.333 0.00 0.00 0.00 2.66
168 169 7.027161 GCACGACCAAATCACAAATATTACTT 58.973 34.615 0.00 0.00 0.00 2.24
169 170 6.374333 AGCACGACCAAATCACAAATATTACT 59.626 34.615 0.00 0.00 0.00 2.24
170 171 6.468956 CAGCACGACCAAATCACAAATATTAC 59.531 38.462 0.00 0.00 0.00 1.89
171 172 6.404184 CCAGCACGACCAAATCACAAATATTA 60.404 38.462 0.00 0.00 0.00 0.98
172 173 5.401550 CAGCACGACCAAATCACAAATATT 58.598 37.500 0.00 0.00 0.00 1.28
173 174 4.142403 CCAGCACGACCAAATCACAAATAT 60.142 41.667 0.00 0.00 0.00 1.28
174 175 3.190327 CCAGCACGACCAAATCACAAATA 59.810 43.478 0.00 0.00 0.00 1.40
175 176 2.030007 CCAGCACGACCAAATCACAAAT 60.030 45.455 0.00 0.00 0.00 2.32
176 177 1.336440 CCAGCACGACCAAATCACAAA 59.664 47.619 0.00 0.00 0.00 2.83
177 178 0.950836 CCAGCACGACCAAATCACAA 59.049 50.000 0.00 0.00 0.00 3.33
178 179 0.179032 ACCAGCACGACCAAATCACA 60.179 50.000 0.00 0.00 0.00 3.58
179 180 1.732259 CTACCAGCACGACCAAATCAC 59.268 52.381 0.00 0.00 0.00 3.06
180 181 1.943968 GCTACCAGCACGACCAAATCA 60.944 52.381 0.00 0.00 41.89 2.57
181 182 0.727398 GCTACCAGCACGACCAAATC 59.273 55.000 0.00 0.00 41.89 2.17
182 183 0.676782 GGCTACCAGCACGACCAAAT 60.677 55.000 0.00 0.00 44.75 2.32
183 184 1.302192 GGCTACCAGCACGACCAAA 60.302 57.895 0.00 0.00 44.75 3.28
184 185 2.167398 GAGGCTACCAGCACGACCAA 62.167 60.000 0.00 0.00 44.75 3.67
185 186 2.603473 AGGCTACCAGCACGACCA 60.603 61.111 0.00 0.00 44.75 4.02
186 187 2.184579 GAGGCTACCAGCACGACC 59.815 66.667 0.00 0.00 44.75 4.79
187 188 2.202623 CGAGGCTACCAGCACGAC 60.203 66.667 10.02 0.00 44.75 4.34
188 189 2.675423 ACGAGGCTACCAGCACGA 60.675 61.111 18.41 0.00 44.75 4.35
189 190 2.507102 CACGAGGCTACCAGCACG 60.507 66.667 12.74 12.74 44.75 5.34
190 191 1.004918 AACACGAGGCTACCAGCAC 60.005 57.895 0.00 0.00 44.75 4.40
191 192 1.005037 CAACACGAGGCTACCAGCA 60.005 57.895 0.00 0.00 44.75 4.41
192 193 0.602905 AACAACACGAGGCTACCAGC 60.603 55.000 0.00 0.00 41.46 4.85
193 194 1.148310 CAACAACACGAGGCTACCAG 58.852 55.000 0.00 0.00 0.00 4.00
194 195 0.466543 ACAACAACACGAGGCTACCA 59.533 50.000 0.00 0.00 0.00 3.25
195 196 2.064014 GTACAACAACACGAGGCTACC 58.936 52.381 0.00 0.00 0.00 3.18
196 197 3.022607 AGTACAACAACACGAGGCTAC 57.977 47.619 0.00 0.00 0.00 3.58
197 198 3.569277 TGTAGTACAACAACACGAGGCTA 59.431 43.478 0.00 0.00 0.00 3.93
198 199 2.363038 TGTAGTACAACAACACGAGGCT 59.637 45.455 0.00 0.00 0.00 4.58
199 200 2.473984 GTGTAGTACAACAACACGAGGC 59.526 50.000 4.11 0.00 34.72 4.70
200 201 3.973657 AGTGTAGTACAACAACACGAGG 58.026 45.455 4.11 0.00 46.33 4.63
201 202 5.116680 GCTAAGTGTAGTACAACAACACGAG 59.883 44.000 4.11 13.43 46.33 4.18
202 203 4.977963 GCTAAGTGTAGTACAACAACACGA 59.022 41.667 4.11 6.68 46.33 4.35
203 204 4.980434 AGCTAAGTGTAGTACAACAACACG 59.020 41.667 4.11 0.00 46.33 4.49
204 205 8.027771 AGATAGCTAAGTGTAGTACAACAACAC 58.972 37.037 4.11 10.89 43.02 3.32
205 206 8.118976 AGATAGCTAAGTGTAGTACAACAACA 57.881 34.615 4.11 0.00 0.00 3.33
206 207 8.983307 AAGATAGCTAAGTGTAGTACAACAAC 57.017 34.615 4.11 0.00 0.00 3.32
207 208 9.991906 AAAAGATAGCTAAGTGTAGTACAACAA 57.008 29.630 4.11 0.00 0.00 2.83
208 209 9.991906 AAAAAGATAGCTAAGTGTAGTACAACA 57.008 29.630 4.11 0.00 0.00 3.33
210 211 9.991906 ACAAAAAGATAGCTAAGTGTAGTACAA 57.008 29.630 4.11 0.00 0.00 2.41
211 212 9.991906 AACAAAAAGATAGCTAAGTGTAGTACA 57.008 29.630 0.00 0.00 0.00 2.90
213 214 9.431887 CCAACAAAAAGATAGCTAAGTGTAGTA 57.568 33.333 0.00 0.00 0.00 1.82
214 215 7.937394 ACCAACAAAAAGATAGCTAAGTGTAGT 59.063 33.333 0.00 0.00 0.00 2.73
215 216 8.324163 ACCAACAAAAAGATAGCTAAGTGTAG 57.676 34.615 0.00 0.00 0.00 2.74
216 217 8.685838 AACCAACAAAAAGATAGCTAAGTGTA 57.314 30.769 0.00 0.00 0.00 2.90
217 218 7.582667 AACCAACAAAAAGATAGCTAAGTGT 57.417 32.000 0.00 0.00 0.00 3.55
218 219 8.871686 AAAACCAACAAAAAGATAGCTAAGTG 57.128 30.769 0.00 0.00 0.00 3.16
219 220 8.691797 TGAAAACCAACAAAAAGATAGCTAAGT 58.308 29.630 0.00 0.00 0.00 2.24
220 221 9.185192 CTGAAAACCAACAAAAAGATAGCTAAG 57.815 33.333 0.00 0.00 0.00 2.18
221 222 8.141268 CCTGAAAACCAACAAAAAGATAGCTAA 58.859 33.333 0.00 0.00 0.00 3.09
222 223 7.286775 ACCTGAAAACCAACAAAAAGATAGCTA 59.713 33.333 0.00 0.00 0.00 3.32
223 224 6.098266 ACCTGAAAACCAACAAAAAGATAGCT 59.902 34.615 0.00 0.00 0.00 3.32
224 225 6.280643 ACCTGAAAACCAACAAAAAGATAGC 58.719 36.000 0.00 0.00 0.00 2.97
225 226 7.716612 AGACCTGAAAACCAACAAAAAGATAG 58.283 34.615 0.00 0.00 0.00 2.08
226 227 7.654022 AGACCTGAAAACCAACAAAAAGATA 57.346 32.000 0.00 0.00 0.00 1.98
227 228 6.544928 AGACCTGAAAACCAACAAAAAGAT 57.455 33.333 0.00 0.00 0.00 2.40
228 229 5.993748 AGACCTGAAAACCAACAAAAAGA 57.006 34.783 0.00 0.00 0.00 2.52
229 230 7.433708 AAAAGACCTGAAAACCAACAAAAAG 57.566 32.000 0.00 0.00 0.00 2.27
230 231 7.499232 TGAAAAAGACCTGAAAACCAACAAAAA 59.501 29.630 0.00 0.00 0.00 1.94
231 232 6.992715 TGAAAAAGACCTGAAAACCAACAAAA 59.007 30.769 0.00 0.00 0.00 2.44
232 233 6.525629 TGAAAAAGACCTGAAAACCAACAAA 58.474 32.000 0.00 0.00 0.00 2.83
233 234 6.102897 TGAAAAAGACCTGAAAACCAACAA 57.897 33.333 0.00 0.00 0.00 2.83
234 235 5.730296 TGAAAAAGACCTGAAAACCAACA 57.270 34.783 0.00 0.00 0.00 3.33
235 236 6.092122 CCTTTGAAAAAGACCTGAAAACCAAC 59.908 38.462 1.31 0.00 0.00 3.77
236 237 6.169800 CCTTTGAAAAAGACCTGAAAACCAA 58.830 36.000 1.31 0.00 0.00 3.67
237 238 5.337975 CCCTTTGAAAAAGACCTGAAAACCA 60.338 40.000 1.31 0.00 0.00 3.67
238 239 5.116180 CCCTTTGAAAAAGACCTGAAAACC 58.884 41.667 1.31 0.00 0.00 3.27
239 240 5.580691 CACCCTTTGAAAAAGACCTGAAAAC 59.419 40.000 1.31 0.00 0.00 2.43
240 241 5.247337 ACACCCTTTGAAAAAGACCTGAAAA 59.753 36.000 1.31 0.00 0.00 2.29
241 242 4.775253 ACACCCTTTGAAAAAGACCTGAAA 59.225 37.500 1.31 0.00 0.00 2.69
242 243 4.159506 CACACCCTTTGAAAAAGACCTGAA 59.840 41.667 1.31 0.00 0.00 3.02
243 244 3.699038 CACACCCTTTGAAAAAGACCTGA 59.301 43.478 1.31 0.00 0.00 3.86
244 245 3.699038 TCACACCCTTTGAAAAAGACCTG 59.301 43.478 1.31 0.00 0.00 4.00
245 246 3.699538 GTCACACCCTTTGAAAAAGACCT 59.300 43.478 1.31 0.00 0.00 3.85
246 247 3.445805 TGTCACACCCTTTGAAAAAGACC 59.554 43.478 1.31 0.00 0.00 3.85
247 248 4.712122 TGTCACACCCTTTGAAAAAGAC 57.288 40.909 1.31 0.00 0.00 3.01
248 249 5.200483 AGATGTCACACCCTTTGAAAAAGA 58.800 37.500 1.31 0.00 0.00 2.52
249 250 5.520376 AGATGTCACACCCTTTGAAAAAG 57.480 39.130 0.00 0.00 0.00 2.27
250 251 5.930837 AAGATGTCACACCCTTTGAAAAA 57.069 34.783 0.00 0.00 0.00 1.94
251 252 5.420421 TCAAAGATGTCACACCCTTTGAAAA 59.580 36.000 24.20 10.51 46.36 2.29
252 253 4.952957 TCAAAGATGTCACACCCTTTGAAA 59.047 37.500 24.20 11.02 46.36 2.69
253 254 4.531854 TCAAAGATGTCACACCCTTTGAA 58.468 39.130 24.20 13.91 46.36 2.69
254 255 4.163441 TCAAAGATGTCACACCCTTTGA 57.837 40.909 23.28 23.28 46.84 2.69
255 256 4.261741 CCTTCAAAGATGTCACACCCTTTG 60.262 45.833 20.55 20.55 43.91 2.77
256 257 3.891366 CCTTCAAAGATGTCACACCCTTT 59.109 43.478 2.08 2.08 0.00 3.11
257 258 3.117512 ACCTTCAAAGATGTCACACCCTT 60.118 43.478 0.00 0.00 0.00 3.95
258 259 2.443255 ACCTTCAAAGATGTCACACCCT 59.557 45.455 0.00 0.00 0.00 4.34
259 260 2.554032 CACCTTCAAAGATGTCACACCC 59.446 50.000 0.00 0.00 0.00 4.61
260 261 3.214328 ACACCTTCAAAGATGTCACACC 58.786 45.455 0.00 0.00 0.00 4.16
261 262 5.617751 GCATACACCTTCAAAGATGTCACAC 60.618 44.000 0.00 0.00 0.00 3.82
262 263 4.455533 GCATACACCTTCAAAGATGTCACA 59.544 41.667 0.00 0.00 0.00 3.58
263 264 4.697352 AGCATACACCTTCAAAGATGTCAC 59.303 41.667 0.00 0.00 0.00 3.67
264 265 4.910195 AGCATACACCTTCAAAGATGTCA 58.090 39.130 0.00 0.00 0.00 3.58
265 266 5.886960 AAGCATACACCTTCAAAGATGTC 57.113 39.130 0.00 0.00 0.00 3.06
266 267 7.665559 TCTTAAAGCATACACCTTCAAAGATGT 59.334 33.333 0.00 0.00 0.00 3.06
267 268 8.044060 TCTTAAAGCATACACCTTCAAAGATG 57.956 34.615 0.00 0.00 0.00 2.90
268 269 8.515414 GTTCTTAAAGCATACACCTTCAAAGAT 58.485 33.333 0.00 0.00 30.74 2.40
269 270 7.040686 GGTTCTTAAAGCATACACCTTCAAAGA 60.041 37.037 0.00 0.00 33.03 2.52
270 271 7.084486 GGTTCTTAAAGCATACACCTTCAAAG 58.916 38.462 0.00 0.00 33.03 2.77
271 272 6.547880 TGGTTCTTAAAGCATACACCTTCAAA 59.452 34.615 0.00 0.00 37.94 2.69
272 273 6.065374 TGGTTCTTAAAGCATACACCTTCAA 58.935 36.000 0.00 0.00 37.94 2.69
273 274 5.626142 TGGTTCTTAAAGCATACACCTTCA 58.374 37.500 0.00 0.00 37.94 3.02
274 275 5.392057 GCTGGTTCTTAAAGCATACACCTTC 60.392 44.000 0.00 0.00 41.72 3.46
275 276 4.459337 GCTGGTTCTTAAAGCATACACCTT 59.541 41.667 0.00 0.00 41.72 3.50
276 277 4.010349 GCTGGTTCTTAAAGCATACACCT 58.990 43.478 0.00 0.00 41.72 4.00
277 278 3.181510 CGCTGGTTCTTAAAGCATACACC 60.182 47.826 0.00 0.00 41.72 4.16
278 279 3.435671 ACGCTGGTTCTTAAAGCATACAC 59.564 43.478 0.00 0.00 41.72 2.90
279 280 3.670625 ACGCTGGTTCTTAAAGCATACA 58.329 40.909 0.00 0.00 41.72 2.29
280 281 5.789710 TTACGCTGGTTCTTAAAGCATAC 57.210 39.130 0.00 0.00 41.72 2.39
281 282 6.995511 AATTACGCTGGTTCTTAAAGCATA 57.004 33.333 0.00 0.00 41.72 3.14
282 283 5.897377 AATTACGCTGGTTCTTAAAGCAT 57.103 34.783 0.00 0.00 41.72 3.79
283 284 5.699097 AAATTACGCTGGTTCTTAAAGCA 57.301 34.783 0.00 0.00 40.44 3.91
284 285 7.524065 TCTAAAATTACGCTGGTTCTTAAAGC 58.476 34.615 0.00 0.00 0.00 3.51
285 286 7.692705 GCTCTAAAATTACGCTGGTTCTTAAAG 59.307 37.037 0.00 0.00 0.00 1.85
286 287 7.173562 TGCTCTAAAATTACGCTGGTTCTTAAA 59.826 33.333 0.00 0.00 0.00 1.52
287 288 6.651643 TGCTCTAAAATTACGCTGGTTCTTAA 59.348 34.615 0.00 0.00 0.00 1.85
288 289 6.167685 TGCTCTAAAATTACGCTGGTTCTTA 58.832 36.000 0.00 0.00 0.00 2.10
289 290 5.001232 TGCTCTAAAATTACGCTGGTTCTT 58.999 37.500 0.00 0.00 0.00 2.52
290 291 4.575885 TGCTCTAAAATTACGCTGGTTCT 58.424 39.130 0.00 0.00 0.00 3.01
291 292 4.728021 GCTGCTCTAAAATTACGCTGGTTC 60.728 45.833 0.00 0.00 0.00 3.62
292 293 3.127030 GCTGCTCTAAAATTACGCTGGTT 59.873 43.478 0.00 0.00 0.00 3.67
293 294 2.678336 GCTGCTCTAAAATTACGCTGGT 59.322 45.455 0.00 0.00 0.00 4.00
294 295 2.285834 CGCTGCTCTAAAATTACGCTGG 60.286 50.000 0.00 0.00 0.00 4.85
295 296 2.603110 TCGCTGCTCTAAAATTACGCTG 59.397 45.455 0.00 0.00 0.00 5.18
296 297 2.888594 TCGCTGCTCTAAAATTACGCT 58.111 42.857 0.00 0.00 0.00 5.07
297 298 3.861569 ATCGCTGCTCTAAAATTACGC 57.138 42.857 0.00 0.00 0.00 4.42
298 299 6.701937 TGTAAATCGCTGCTCTAAAATTACG 58.298 36.000 0.00 0.00 0.00 3.18
299 300 8.552034 AGATGTAAATCGCTGCTCTAAAATTAC 58.448 33.333 0.00 0.00 0.00 1.89
300 301 8.662781 AGATGTAAATCGCTGCTCTAAAATTA 57.337 30.769 0.00 0.00 0.00 1.40
301 302 7.254932 GGAGATGTAAATCGCTGCTCTAAAATT 60.255 37.037 0.00 0.00 0.00 1.82
302 303 6.203723 GGAGATGTAAATCGCTGCTCTAAAAT 59.796 38.462 0.00 0.00 0.00 1.82
303 304 5.523916 GGAGATGTAAATCGCTGCTCTAAAA 59.476 40.000 0.00 0.00 0.00 1.52
304 305 5.050490 GGAGATGTAAATCGCTGCTCTAAA 58.950 41.667 0.00 0.00 0.00 1.85
305 306 4.342378 AGGAGATGTAAATCGCTGCTCTAA 59.658 41.667 0.00 0.00 0.00 2.10
306 307 3.891977 AGGAGATGTAAATCGCTGCTCTA 59.108 43.478 0.00 0.00 0.00 2.43
307 308 2.697751 AGGAGATGTAAATCGCTGCTCT 59.302 45.455 0.00 0.00 0.00 4.09
308 309 3.104843 AGGAGATGTAAATCGCTGCTC 57.895 47.619 0.00 0.00 0.00 4.26
309 310 4.881019 ATAGGAGATGTAAATCGCTGCT 57.119 40.909 0.00 0.00 33.53 4.24
310 311 5.931441 AAATAGGAGATGTAAATCGCTGC 57.069 39.130 0.00 0.00 0.00 5.25
311 312 8.539770 ACATAAATAGGAGATGTAAATCGCTG 57.460 34.615 0.00 0.00 32.07 5.18
312 313 9.561069 AAACATAAATAGGAGATGTAAATCGCT 57.439 29.630 0.00 0.00 33.48 4.93
320 321 8.408601 GCACATGAAAACATAAATAGGAGATGT 58.591 33.333 0.00 0.00 35.32 3.06
321 322 8.407832 TGCACATGAAAACATAAATAGGAGATG 58.592 33.333 0.00 0.00 0.00 2.90
322 323 8.408601 GTGCACATGAAAACATAAATAGGAGAT 58.591 33.333 13.17 0.00 0.00 2.75
323 324 7.413988 CGTGCACATGAAAACATAAATAGGAGA 60.414 37.037 18.64 0.00 0.00 3.71
324 325 6.688385 CGTGCACATGAAAACATAAATAGGAG 59.312 38.462 18.64 0.00 0.00 3.69
325 326 6.404184 CCGTGCACATGAAAACATAAATAGGA 60.404 38.462 18.64 0.00 0.00 2.94
326 327 5.743398 CCGTGCACATGAAAACATAAATAGG 59.257 40.000 18.64 0.00 0.00 2.57
327 328 6.321717 ACCGTGCACATGAAAACATAAATAG 58.678 36.000 18.64 0.00 0.00 1.73
328 329 6.072452 TGACCGTGCACATGAAAACATAAATA 60.072 34.615 18.64 0.00 0.00 1.40
329 330 5.132897 ACCGTGCACATGAAAACATAAAT 57.867 34.783 18.64 0.00 0.00 1.40
330 331 4.036852 TGACCGTGCACATGAAAACATAAA 59.963 37.500 18.64 0.00 0.00 1.40
331 332 3.565902 TGACCGTGCACATGAAAACATAA 59.434 39.130 18.64 0.00 0.00 1.90
332 333 3.142174 TGACCGTGCACATGAAAACATA 58.858 40.909 18.64 0.00 0.00 2.29
333 334 1.952990 TGACCGTGCACATGAAAACAT 59.047 42.857 18.64 0.00 0.00 2.71
334 335 1.383523 TGACCGTGCACATGAAAACA 58.616 45.000 18.64 3.90 0.00 2.83
335 336 2.116366 GTTGACCGTGCACATGAAAAC 58.884 47.619 18.64 10.24 0.00 2.43
336 337 1.745653 TGTTGACCGTGCACATGAAAA 59.254 42.857 18.64 1.20 0.00 2.29
337 338 1.333308 CTGTTGACCGTGCACATGAAA 59.667 47.619 18.64 2.72 0.00 2.69
338 339 0.943673 CTGTTGACCGTGCACATGAA 59.056 50.000 18.64 1.40 0.00 2.57
339 340 0.105778 TCTGTTGACCGTGCACATGA 59.894 50.000 18.64 0.00 0.00 3.07
340 341 0.514255 CTCTGTTGACCGTGCACATG 59.486 55.000 18.64 9.80 0.00 3.21
341 342 0.106708 ACTCTGTTGACCGTGCACAT 59.893 50.000 18.64 3.58 0.00 3.21
342 343 0.809636 CACTCTGTTGACCGTGCACA 60.810 55.000 18.64 0.00 0.00 4.57
343 344 0.810031 ACACTCTGTTGACCGTGCAC 60.810 55.000 6.82 6.82 0.00 4.57
344 345 0.809636 CACACTCTGTTGACCGTGCA 60.810 55.000 0.00 0.00 0.00 4.57
345 346 0.529773 TCACACTCTGTTGACCGTGC 60.530 55.000 0.00 0.00 0.00 5.34
346 347 2.154854 ATCACACTCTGTTGACCGTG 57.845 50.000 0.00 0.00 0.00 4.94
347 348 4.537135 AATATCACACTCTGTTGACCGT 57.463 40.909 0.00 0.00 0.00 4.83
348 349 5.862924 AAAATATCACACTCTGTTGACCG 57.137 39.130 0.00 0.00 0.00 4.79
389 390 7.116736 GGAAATAATCCCAACTTCCAGAACTA 58.883 38.462 0.00 0.00 43.00 2.24
416 417 4.082841 TCACCGTATCGTTTACAAGTGCTA 60.083 41.667 10.65 0.00 0.00 3.49
434 436 7.066284 AGACTTTTATTCCTCAAATGATCACCG 59.934 37.037 0.00 0.00 0.00 4.94
699 727 1.489649 CATGGAGATCTTCAGGTGGCT 59.510 52.381 10.13 0.00 0.00 4.75
963 1012 2.111756 CAAGCGCTTTTATTCATCGGC 58.888 47.619 22.51 0.00 0.00 5.54
990 1039 1.332904 CGCTTTTATTCATCGGCGACC 60.333 52.381 13.76 0.00 44.36 4.79
991 1040 1.915965 GCGCTTTTATTCATCGGCGAC 60.916 52.381 13.76 0.00 44.36 5.19
992 1041 0.303493 GCGCTTTTATTCATCGGCGA 59.697 50.000 13.87 13.87 44.36 5.54
993 1042 0.304705 AGCGCTTTTATTCATCGGCG 59.695 50.000 2.64 0.00 44.40 6.46
994 1043 2.111756 CAAGCGCTTTTATTCATCGGC 58.888 47.619 22.51 0.00 0.00 5.54
995 1044 2.111756 GCAAGCGCTTTTATTCATCGG 58.888 47.619 22.51 6.15 34.30 4.18
996 1045 1.769622 CGCAAGCGCTTTTATTCATCG 59.230 47.619 22.51 6.96 35.30 3.84
997 1046 2.111756 CCGCAAGCGCTTTTATTCATC 58.888 47.619 22.51 1.50 38.24 2.92
998 1047 1.472480 ACCGCAAGCGCTTTTATTCAT 59.528 42.857 22.51 0.00 38.24 2.57
999 1048 0.878416 ACCGCAAGCGCTTTTATTCA 59.122 45.000 22.51 0.00 38.24 2.57
1000 1049 1.535088 GACCGCAAGCGCTTTTATTC 58.465 50.000 22.51 11.20 38.24 1.75
1001 1050 0.179200 CGACCGCAAGCGCTTTTATT 60.179 50.000 22.51 5.25 38.24 1.40
1002 1051 1.423845 CGACCGCAAGCGCTTTTAT 59.576 52.632 22.51 6.27 38.24 1.40
1003 1052 2.673114 CCGACCGCAAGCGCTTTTA 61.673 57.895 22.51 0.00 38.24 1.52
1004 1053 4.025401 CCGACCGCAAGCGCTTTT 62.025 61.111 22.51 4.83 38.24 2.27
1228 1280 1.344438 CTGTGCTTGGTCCAGTACTCA 59.656 52.381 0.00 0.00 31.10 3.41
1229 1281 1.941668 GCTGTGCTTGGTCCAGTACTC 60.942 57.143 0.00 0.00 31.10 2.59
1265 1317 2.037527 GGACTCCCGGGACTCACT 59.962 66.667 22.63 0.00 0.00 3.41
1420 1475 0.805322 CAGGAGCAGCGACATGAGAC 60.805 60.000 0.00 0.00 0.00 3.36
1424 1479 3.200593 GGCAGGAGCAGCGACATG 61.201 66.667 0.00 0.00 44.61 3.21
1537 1616 3.849951 GCATCGAAGGAGCCGGGA 61.850 66.667 2.18 0.00 0.00 5.14
1840 2510 0.734253 CTGGAGTCGCCTTCTTCACG 60.734 60.000 0.00 0.00 37.63 4.35
2213 3821 7.234661 TGCCCTTTATTTACTTAAACCCTTG 57.765 36.000 0.00 0.00 0.00 3.61
2303 3914 0.106708 TTTCCGCTCTGTCTTGTGCT 59.893 50.000 0.00 0.00 0.00 4.40
2508 4124 3.242478 CGTCGGAAACTGCAACTTTAACA 60.242 43.478 0.00 0.00 0.00 2.41
2722 5297 2.438021 TGCCTCAGTACACACTTTTCCT 59.562 45.455 0.00 0.00 30.46 3.36
2760 5335 6.560253 ACATGGTATTGTGAAAACAGAGAC 57.440 37.500 0.00 0.00 0.00 3.36
2955 5820 2.408050 CACACGGACTCAAGAAAGGAG 58.592 52.381 0.00 0.00 38.36 3.69
3056 5930 0.037046 GCCCAAATTCAGGCCAACAG 60.037 55.000 5.01 0.00 43.76 3.16
3095 5969 7.581213 TGCTTTTAAAGAGAAATGGAGAACA 57.419 32.000 9.10 0.00 0.00 3.18
3096 5970 7.062722 GCATGCTTTTAAAGAGAAATGGAGAAC 59.937 37.037 11.37 0.00 0.00 3.01
3097 5971 7.092716 GCATGCTTTTAAAGAGAAATGGAGAA 58.907 34.615 11.37 0.00 0.00 2.87
3098 5972 6.209192 TGCATGCTTTTAAAGAGAAATGGAGA 59.791 34.615 20.33 0.00 0.00 3.71
3099 5973 6.392354 TGCATGCTTTTAAAGAGAAATGGAG 58.608 36.000 20.33 0.00 0.00 3.86
3100 5974 6.209192 TCTGCATGCTTTTAAAGAGAAATGGA 59.791 34.615 20.33 6.53 0.00 3.41
3101 5975 6.392354 TCTGCATGCTTTTAAAGAGAAATGG 58.608 36.000 20.33 0.00 0.00 3.16
3102 5976 7.878477 TTCTGCATGCTTTTAAAGAGAAATG 57.122 32.000 20.33 7.18 0.00 2.32
3103 5977 8.891671 TTTTCTGCATGCTTTTAAAGAGAAAT 57.108 26.923 20.33 0.00 30.98 2.17
3104 5978 8.891671 ATTTTCTGCATGCTTTTAAAGAGAAA 57.108 26.923 20.33 18.27 29.68 2.52
3105 5979 7.599998 GGATTTTCTGCATGCTTTTAAAGAGAA 59.400 33.333 20.33 13.43 0.00 2.87
3106 5980 7.092716 GGATTTTCTGCATGCTTTTAAAGAGA 58.907 34.615 20.33 7.64 0.00 3.10
3107 5981 6.869913 TGGATTTTCTGCATGCTTTTAAAGAG 59.130 34.615 20.33 5.10 0.00 2.85
3108 5982 6.757237 TGGATTTTCTGCATGCTTTTAAAGA 58.243 32.000 20.33 9.21 0.00 2.52
3109 5983 7.605410 ATGGATTTTCTGCATGCTTTTAAAG 57.395 32.000 20.33 6.69 34.17 1.85
3110 5984 7.548780 GGTATGGATTTTCTGCATGCTTTTAAA 59.451 33.333 20.33 13.56 38.18 1.52
3111 5985 7.041107 GGTATGGATTTTCTGCATGCTTTTAA 58.959 34.615 20.33 8.64 38.18 1.52
3112 5986 6.406849 GGGTATGGATTTTCTGCATGCTTTTA 60.407 38.462 20.33 0.00 38.18 1.52
3113 5987 5.422145 GGTATGGATTTTCTGCATGCTTTT 58.578 37.500 20.33 0.00 38.18 2.27
3114 5988 4.141869 GGGTATGGATTTTCTGCATGCTTT 60.142 41.667 20.33 0.00 38.18 3.51
3115 5989 3.385755 GGGTATGGATTTTCTGCATGCTT 59.614 43.478 20.33 0.00 38.18 3.91
3116 5990 2.961062 GGGTATGGATTTTCTGCATGCT 59.039 45.455 20.33 0.00 38.18 3.79
3117 5991 2.961062 AGGGTATGGATTTTCTGCATGC 59.039 45.455 11.82 11.82 36.47 4.06
3118 5992 4.209538 TCAGGGTATGGATTTTCTGCATG 58.790 43.478 0.00 0.00 36.47 4.06
3119 5993 4.524802 TCAGGGTATGGATTTTCTGCAT 57.475 40.909 0.00 0.00 39.53 3.96
3120 5994 4.524802 ATCAGGGTATGGATTTTCTGCA 57.475 40.909 0.00 0.00 0.00 4.41
3121 5995 5.859205 AAATCAGGGTATGGATTTTCTGC 57.141 39.130 0.00 0.00 39.93 4.26
3158 6032 2.883026 TGGTTTTGGTACCAGGGAATG 58.117 47.619 15.65 0.00 43.14 2.67
3166 6040 6.354130 TCTAGAGCAATATGGTTTTGGTACC 58.646 40.000 4.43 4.43 35.12 3.34
3167 6041 8.451908 AATCTAGAGCAATATGGTTTTGGTAC 57.548 34.615 0.00 0.00 35.12 3.34
3169 6043 7.961326 AAATCTAGAGCAATATGGTTTTGGT 57.039 32.000 0.00 0.00 37.50 3.67
3170 6044 8.902806 TGTAAATCTAGAGCAATATGGTTTTGG 58.097 33.333 0.00 0.00 0.00 3.28
3171 6045 9.941664 CTGTAAATCTAGAGCAATATGGTTTTG 57.058 33.333 0.00 0.00 0.00 2.44
3172 6046 9.686683 ACTGTAAATCTAGAGCAATATGGTTTT 57.313 29.630 0.00 0.00 0.00 2.43
3173 6047 9.686683 AACTGTAAATCTAGAGCAATATGGTTT 57.313 29.630 0.00 0.00 0.00 3.27
3174 6048 9.686683 AAACTGTAAATCTAGAGCAATATGGTT 57.313 29.630 0.00 0.00 0.00 3.67
3175 6049 9.686683 AAAACTGTAAATCTAGAGCAATATGGT 57.313 29.630 0.00 0.00 0.00 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.