Multiple sequence alignment - TraesCS5D01G174700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G174700 chr5D 100.000 4655 0 0 1 4655 274144720 274140066 0.000000e+00 8597.0
1 TraesCS5D01G174700 chr5D 90.541 148 12 1 1954 2099 274142474 274142327 1.320000e-45 195.0
2 TraesCS5D01G174700 chr5D 90.541 148 12 1 2247 2394 274142767 274142622 1.320000e-45 195.0
3 TraesCS5D01G174700 chr5B 89.116 2003 150 34 709 2696 309386034 309384085 0.000000e+00 2429.0
4 TraesCS5D01G174700 chr5B 88.192 1084 85 30 2808 3857 309383934 309382860 0.000000e+00 1253.0
5 TraesCS5D01G174700 chr5B 86.990 515 36 9 4149 4655 309380600 309380109 6.810000e-153 551.0
6 TraesCS5D01G174700 chr5B 84.950 299 36 7 102 393 309386338 309386042 1.270000e-75 294.0
7 TraesCS5D01G174700 chr5B 91.216 148 10 2 2247 2394 309384828 309384684 1.020000e-46 198.0
8 TraesCS5D01G174700 chr5B 89.933 149 12 2 1954 2099 309384538 309384390 6.150000e-44 189.0
9 TraesCS5D01G174700 chr5B 86.747 166 17 3 2231 2394 309384306 309384144 3.700000e-41 180.0
10 TraesCS5D01G174700 chr5B 87.919 149 17 1 1954 2101 309384290 309384142 1.720000e-39 174.0
11 TraesCS5D01G174700 chr5B 77.833 203 30 12 102 293 89761431 89761629 1.370000e-20 111.0
12 TraesCS5D01G174700 chr5B 100.000 28 0 0 581 608 470054779 470054806 8.000000e-03 52.8
13 TraesCS5D01G174700 chr5A 90.916 1310 81 16 111 1410 363281687 363280406 0.000000e+00 1725.0
14 TraesCS5D01G174700 chr5A 89.916 1071 89 16 2808 3866 363279161 363278098 0.000000e+00 1362.0
15 TraesCS5D01G174700 chr5A 89.480 808 69 14 1942 2742 363280068 363279270 0.000000e+00 1007.0
16 TraesCS5D01G174700 chr5A 86.683 398 30 11 105 498 363282072 363281694 2.000000e-113 420.0
17 TraesCS5D01G174700 chr5A 80.488 492 84 8 1471 1954 425487051 425486564 2.650000e-97 366.0
18 TraesCS5D01G174700 chr5A 79.641 501 91 7 1462 1954 44118455 44117958 2.670000e-92 350.0
19 TraesCS5D01G174700 chr5A 89.823 226 16 3 4426 4649 363277367 363277147 2.740000e-72 283.0
20 TraesCS5D01G174700 chr5A 89.005 191 21 0 1233 1423 44118643 44118453 2.170000e-58 237.0
21 TraesCS5D01G174700 chr5A 88.770 187 19 2 1233 1418 425487227 425487042 1.300000e-55 228.0
22 TraesCS5D01G174700 chr5A 91.018 167 8 3 4149 4313 363277529 363277368 7.840000e-53 219.0
23 TraesCS5D01G174700 chr5A 85.638 188 21 5 1916 2099 363279803 363279618 4.750000e-45 193.0
24 TraesCS5D01G174700 chr5A 83.444 151 23 2 604 753 513229417 513229566 6.280000e-29 139.0
25 TraesCS5D01G174700 chr5A 81.746 126 15 8 333 454 546505941 546505820 1.070000e-16 99.0
26 TraesCS5D01G174700 chr5A 77.703 148 29 3 389 536 540847760 540847903 2.310000e-13 87.9
27 TraesCS5D01G174700 chr5A 94.444 54 1 2 4036 4088 363277736 363277684 1.070000e-11 82.4
28 TraesCS5D01G174700 chr3D 81.038 501 82 9 1462 1954 258273971 258274466 2.030000e-103 387.0
29 TraesCS5D01G174700 chr3D 80.311 193 24 8 75 256 8899399 8899588 2.920000e-27 134.0
30 TraesCS5D01G174700 chr3D 81.707 164 24 6 376 535 550685791 550685952 1.050000e-26 132.0
31 TraesCS5D01G174700 chr3D 100.000 29 0 0 43 71 563225724 563225752 2.000000e-03 54.7
32 TraesCS5D01G174700 chr1A 80.469 512 85 10 1454 1954 13947637 13948144 1.220000e-100 377.0
33 TraesCS5D01G174700 chr1A 88.830 188 21 0 1233 1420 13947459 13947646 1.010000e-56 231.0
34 TraesCS5D01G174700 chrUn 82.895 152 23 3 386 536 11283503 11283354 2.920000e-27 134.0
35 TraesCS5D01G174700 chrUn 82.237 152 24 3 386 536 477801238 477801089 1.360000e-25 128.0
36 TraesCS5D01G174700 chr1D 77.350 234 36 12 1 222 479347160 479346932 6.330000e-24 122.0
37 TraesCS5D01G174700 chr2D 75.912 274 45 14 1 256 634293856 634294126 2.270000e-23 121.0
38 TraesCS5D01G174700 chr3A 79.348 184 20 11 91 260 687681574 687681753 3.810000e-21 113.0
39 TraesCS5D01G174700 chr2A 76.596 235 36 14 389 606 699984233 699984001 1.370000e-20 111.0
40 TraesCS5D01G174700 chr2A 77.483 151 29 5 389 536 541839405 541839553 8.300000e-13 86.1
41 TraesCS5D01G174700 chr1B 78.344 157 26 5 387 536 16922813 16922968 1.380000e-15 95.3
42 TraesCS5D01G174700 chr6A 79.688 128 15 7 91 210 15787781 15787657 1.070000e-11 82.4
43 TraesCS5D01G174700 chr3B 87.324 71 6 2 84 154 577724050 577723983 1.390000e-10 78.7
44 TraesCS5D01G174700 chr3B 78.049 123 20 5 491 607 735808971 735809092 2.320000e-08 71.3
45 TraesCS5D01G174700 chr4B 85.714 70 10 0 187 256 102960247 102960178 1.800000e-09 75.0
46 TraesCS5D01G174700 chr4A 83.871 62 9 1 195 255 449237168 449237229 1.810000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G174700 chr5D 274140066 274144720 4654 True 2995.666667 8597 93.694000 1 4655 3 chr5D.!!$R1 4654
1 TraesCS5D01G174700 chr5B 309380109 309386338 6229 True 658.500000 2429 88.132875 102 4655 8 chr5B.!!$R1 4553
2 TraesCS5D01G174700 chr5A 363277147 363282072 4925 True 661.425000 1725 89.739750 105 4649 8 chr5A.!!$R3 4544
3 TraesCS5D01G174700 chr5A 425486564 425487227 663 True 297.000000 366 84.629000 1233 1954 2 chr5A.!!$R4 721
4 TraesCS5D01G174700 chr5A 44117958 44118643 685 True 293.500000 350 84.323000 1233 1954 2 chr5A.!!$R2 721
5 TraesCS5D01G174700 chr1A 13947459 13948144 685 False 304.000000 377 84.649500 1233 1954 2 chr1A.!!$F1 721

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
25 26 0.107654 AGATTTACTGCTCGTGGGGC 60.108 55.000 0.0 0.0 0.00 5.80 F
52 53 0.108186 TGCTTACATGAGAGGCACGG 60.108 55.000 0.0 0.0 0.00 4.94 F
55 56 0.108186 TTACATGAGAGGCACGGCTG 60.108 55.000 0.0 0.0 0.00 4.85 F
345 629 0.249447 CACAGTCGTGCCTTCACAGA 60.249 55.000 0.0 0.0 43.28 3.41 F
1079 1370 0.256464 TCGTTCTCTCTCTCCCTCCC 59.744 60.000 0.0 0.0 0.00 4.30 F
1080 1371 0.257616 CGTTCTCTCTCTCCCTCCCT 59.742 60.000 0.0 0.0 0.00 4.20 F
2996 3355 1.302993 GGTTAAGAACCGCCAGCCA 60.303 57.895 0.0 0.0 42.62 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1092 1383 0.105039 GGAACATAGACGCTGGGGAG 59.895 60.000 0.00 0.00 0.00 4.30 R
1613 1906 0.250252 TCGTGACTGCAGCCAAATCA 60.250 50.000 15.27 6.76 0.00 2.57 R
1855 2154 1.740025 GCCAGAAGAAGATTTCCACCG 59.260 52.381 0.00 0.00 0.00 4.94 R
1985 2287 3.454812 AGATTACGGGGACACTGCTTATT 59.545 43.478 0.00 0.00 0.00 1.40 R
2966 3325 0.248289 TCTTAACCTGGGCTGTACGC 59.752 55.000 0.00 1.72 38.13 4.42 R
3059 3418 0.540923 GGACCTCAGCATTGCTCTCT 59.459 55.000 8.54 0.00 36.40 3.10 R
4137 6692 0.041839 GTTCGCAGCTCACAACACTG 60.042 55.000 0.00 0.00 34.48 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.722147 AGGCATAGATTTACTGCTCGTG 58.278 45.455 0.00 0.00 36.18 4.35
22 23 2.802816 GGCATAGATTTACTGCTCGTGG 59.197 50.000 0.00 0.00 36.18 4.94
23 24 2.802816 GCATAGATTTACTGCTCGTGGG 59.197 50.000 0.00 0.00 33.15 4.61
25 26 0.107654 AGATTTACTGCTCGTGGGGC 60.108 55.000 0.00 0.00 0.00 5.80
26 27 0.392461 GATTTACTGCTCGTGGGGCA 60.392 55.000 0.00 0.00 38.10 5.36
27 28 0.676782 ATTTACTGCTCGTGGGGCAC 60.677 55.000 0.00 0.00 35.71 5.01
28 29 2.046009 TTTACTGCTCGTGGGGCACA 62.046 55.000 0.00 0.00 35.71 4.57
29 30 2.449031 TTACTGCTCGTGGGGCACAG 62.449 60.000 0.00 0.00 35.71 3.66
30 31 4.007644 CTGCTCGTGGGGCACAGA 62.008 66.667 0.00 0.00 35.71 3.41
31 32 3.320879 CTGCTCGTGGGGCACAGAT 62.321 63.158 0.00 0.00 35.71 2.90
32 33 2.045926 GCTCGTGGGGCACAGATT 60.046 61.111 0.00 0.00 33.40 2.40
33 34 1.675641 GCTCGTGGGGCACAGATTT 60.676 57.895 0.00 0.00 33.40 2.17
34 35 1.926511 GCTCGTGGGGCACAGATTTG 61.927 60.000 0.00 0.00 33.40 2.32
35 36 1.926511 CTCGTGGGGCACAGATTTGC 61.927 60.000 0.00 0.00 42.18 3.68
36 37 1.973281 CGTGGGGCACAGATTTGCT 60.973 57.895 0.00 0.00 42.56 3.91
37 38 1.526575 CGTGGGGCACAGATTTGCTT 61.527 55.000 0.00 0.00 42.56 3.91
39 40 1.202348 GTGGGGCACAGATTTGCTTAC 59.798 52.381 0.00 0.00 42.56 2.34
40 41 1.202989 TGGGGCACAGATTTGCTTACA 60.203 47.619 0.00 0.00 42.56 2.41
41 42 2.102578 GGGGCACAGATTTGCTTACAT 58.897 47.619 0.00 0.00 42.56 2.29
42 43 2.159198 GGGGCACAGATTTGCTTACATG 60.159 50.000 0.00 0.00 42.56 3.21
43 44 2.754552 GGGCACAGATTTGCTTACATGA 59.245 45.455 0.00 0.00 42.56 3.07
44 45 3.181493 GGGCACAGATTTGCTTACATGAG 60.181 47.826 0.00 0.00 42.56 2.90
45 46 3.691118 GGCACAGATTTGCTTACATGAGA 59.309 43.478 0.00 0.00 42.56 3.27
46 47 4.201891 GGCACAGATTTGCTTACATGAGAG 60.202 45.833 0.00 0.00 42.56 3.20
50 51 3.944015 AGATTTGCTTACATGAGAGGCAC 59.056 43.478 0.00 0.00 32.47 5.01
51 52 1.725641 TTGCTTACATGAGAGGCACG 58.274 50.000 0.00 0.00 32.47 5.34
52 53 0.108186 TGCTTACATGAGAGGCACGG 60.108 55.000 0.00 0.00 0.00 4.94
54 55 0.176680 CTTACATGAGAGGCACGGCT 59.823 55.000 0.00 0.00 0.00 5.52
55 56 0.108186 TTACATGAGAGGCACGGCTG 60.108 55.000 0.00 0.00 0.00 4.85
56 57 1.257750 TACATGAGAGGCACGGCTGT 61.258 55.000 0.00 0.00 0.00 4.40
128 404 4.705507 ACGAGAGGCACAGATTTACTTCTA 59.294 41.667 0.00 0.00 0.00 2.10
138 414 5.112686 CAGATTTACTTCTAGTGGAGGCAC 58.887 45.833 0.00 0.00 0.00 5.01
222 500 5.049405 CACGAGAGGCACAAATTTACTTCTT 60.049 40.000 0.00 0.00 0.00 2.52
223 501 6.147164 CACGAGAGGCACAAATTTACTTCTTA 59.853 38.462 0.00 0.00 0.00 2.10
343 627 4.436515 CACAGTCGTGCCTTCACA 57.563 55.556 0.00 0.00 43.28 3.58
344 628 2.229039 CACAGTCGTGCCTTCACAG 58.771 57.895 0.00 0.00 43.28 3.66
345 629 0.249447 CACAGTCGTGCCTTCACAGA 60.249 55.000 0.00 0.00 43.28 3.41
348 632 1.528586 CAGTCGTGCCTTCACAGAAAG 59.471 52.381 0.00 0.00 43.28 2.62
380 666 2.813754 CGTTTTTCCTGCCATGAGAGAA 59.186 45.455 0.00 0.00 0.00 2.87
394 680 5.636543 CCATGAGAGAAACAAATTTGCTTCC 59.363 40.000 23.99 17.36 34.64 3.46
400 686 1.234821 ACAAATTTGCTTCCGCGAGA 58.765 45.000 18.12 0.00 39.65 4.04
401 687 1.197721 ACAAATTTGCTTCCGCGAGAG 59.802 47.619 18.12 5.93 39.65 3.20
425 711 1.373570 GACCATGCCTCTCGGAAAAG 58.626 55.000 0.00 0.00 0.00 2.27
429 715 2.819608 CCATGCCTCTCGGAAAAGAAAA 59.180 45.455 0.00 0.00 0.00 2.29
430 716 3.255642 CCATGCCTCTCGGAAAAGAAAAA 59.744 43.478 0.00 0.00 0.00 1.94
488 774 1.162698 TACTTCTCGTGGAGACGTGG 58.837 55.000 13.16 0.67 46.20 4.94
499 785 2.151202 GGAGACGTGGATTTGCTTTCA 58.849 47.619 0.00 0.00 0.00 2.69
500 786 2.095718 GGAGACGTGGATTTGCTTTCAC 60.096 50.000 0.00 0.00 0.00 3.18
514 800 3.834447 TTCACGAGTGGCACGGTCG 62.834 63.158 22.75 22.75 41.16 4.79
529 815 1.446272 GTCGTGCCTCTCGGAAAGG 60.446 63.158 0.00 0.00 36.95 3.11
534 820 0.768622 TGCCTCTCGGAAAGGGAAAA 59.231 50.000 0.00 0.00 34.26 2.29
536 822 1.813178 GCCTCTCGGAAAGGGAAAAAG 59.187 52.381 0.00 0.00 34.26 2.27
539 825 2.814336 CTCTCGGAAAGGGAAAAAGGTG 59.186 50.000 0.00 0.00 0.00 4.00
540 826 1.269723 CTCGGAAAGGGAAAAAGGTGC 59.730 52.381 0.00 0.00 0.00 5.01
547 833 1.835494 GGGAAAAAGGTGCTCCCTAC 58.165 55.000 0.00 0.00 45.47 3.18
549 835 2.618302 GGGAAAAAGGTGCTCCCTACTC 60.618 54.545 0.00 0.00 45.47 2.59
551 837 1.349067 AAAAGGTGCTCCCTACTCGT 58.651 50.000 0.00 0.00 45.47 4.18
552 838 1.349067 AAAGGTGCTCCCTACTCGTT 58.651 50.000 0.00 0.00 45.47 3.85
609 896 6.157904 TCGTCAAAACCTATCAACGTGATTA 58.842 36.000 5.94 0.00 38.26 1.75
659 946 4.986034 ACACGCTAAATATGTTATGCGCTA 59.014 37.500 9.73 0.00 40.42 4.26
663 950 5.344933 CGCTAAATATGTTATGCGCTAGTCA 59.655 40.000 9.73 3.55 34.33 3.41
681 968 3.006967 AGTCATTGGAGCAGTTTAGTCGT 59.993 43.478 0.00 0.00 0.00 4.34
687 974 3.244422 TGGAGCAGTTTAGTCGTTGGATT 60.244 43.478 0.00 0.00 0.00 3.01
694 981 3.328382 TTAGTCGTTGGATTGACCTGG 57.672 47.619 0.00 0.00 39.86 4.45
698 985 2.031157 GTCGTTGGATTGACCTGGTTTG 60.031 50.000 0.00 0.00 39.86 2.93
724 1011 3.821600 GACGAGATTAGTAGGATCTGCCA 59.178 47.826 0.00 0.00 40.02 4.92
826 1113 6.701145 AAAAAGAAGAAGAAGAGGACAACC 57.299 37.500 0.00 0.00 0.00 3.77
827 1114 3.669251 AGAAGAAGAAGAGGACAACCG 57.331 47.619 0.00 0.00 41.83 4.44
867 1158 2.530151 ACTGGGCTGGGCTTCAGA 60.530 61.111 10.89 0.00 46.18 3.27
937 1228 0.609131 CAGGTTGGCCCATTCGAAGT 60.609 55.000 3.35 0.00 34.66 3.01
982 1273 6.097554 AGGTCTCGATGCTCCTATATAAATGG 59.902 42.308 0.00 0.00 0.00 3.16
1072 1363 1.205893 GCCATGGTTCGTTCTCTCTCT 59.794 52.381 14.67 0.00 0.00 3.10
1078 1369 1.746787 GTTCGTTCTCTCTCTCCCTCC 59.253 57.143 0.00 0.00 0.00 4.30
1079 1370 0.256464 TCGTTCTCTCTCTCCCTCCC 59.744 60.000 0.00 0.00 0.00 4.30
1080 1371 0.257616 CGTTCTCTCTCTCCCTCCCT 59.742 60.000 0.00 0.00 0.00 4.20
1081 1372 1.749286 CGTTCTCTCTCTCCCTCCCTC 60.749 61.905 0.00 0.00 0.00 4.30
1087 1378 1.454847 CTCTCCCTCCCTCTCACGG 60.455 68.421 0.00 0.00 0.00 4.94
1092 1383 3.827898 CTCCCTCTCACGGCCGTC 61.828 72.222 31.80 0.00 0.00 4.79
1130 1421 1.544093 CCTTGGCTTTGCTCTGACTCA 60.544 52.381 0.00 0.00 0.00 3.41
1144 1435 3.616821 TCTGACTCAGTGTGTTTCGTTTG 59.383 43.478 5.94 0.00 32.61 2.93
1151 1442 2.737783 AGTGTGTTTCGTTTGTCGTTCA 59.262 40.909 0.00 0.00 40.80 3.18
1173 1464 3.042682 TGGTTTCCAGGTGAAGTACTCA 58.957 45.455 0.00 0.00 33.63 3.41
1214 1505 3.222603 CCAAGTGTAAGTTCCCTTGCTT 58.777 45.455 0.00 0.00 34.70 3.91
1369 1660 1.757699 GGTGAGCTCCCGAGTCTAATT 59.242 52.381 12.15 0.00 0.00 1.40
1420 1711 4.119862 GTGAATGGCTTGCTCGTAGATTA 58.880 43.478 0.00 0.00 33.89 1.75
1423 1714 2.483876 TGGCTTGCTCGTAGATTATGC 58.516 47.619 0.00 0.00 33.89 3.14
1424 1715 2.103094 TGGCTTGCTCGTAGATTATGCT 59.897 45.455 0.00 0.00 33.89 3.79
1425 1716 3.320826 TGGCTTGCTCGTAGATTATGCTA 59.679 43.478 0.00 0.00 33.89 3.49
1426 1717 3.675698 GGCTTGCTCGTAGATTATGCTAC 59.324 47.826 0.00 0.00 37.87 3.58
1427 1718 4.551388 GCTTGCTCGTAGATTATGCTACT 58.449 43.478 0.00 0.00 38.83 2.57
1428 1719 4.384247 GCTTGCTCGTAGATTATGCTACTG 59.616 45.833 0.00 0.00 38.83 2.74
1429 1720 5.515797 TTGCTCGTAGATTATGCTACTGT 57.484 39.130 0.00 0.00 38.83 3.55
1430 1721 5.515797 TGCTCGTAGATTATGCTACTGTT 57.484 39.130 0.00 0.00 38.83 3.16
1431 1722 5.902681 TGCTCGTAGATTATGCTACTGTTT 58.097 37.500 0.00 0.00 38.83 2.83
1432 1723 6.338146 TGCTCGTAGATTATGCTACTGTTTT 58.662 36.000 0.00 0.00 38.83 2.43
1433 1724 6.255670 TGCTCGTAGATTATGCTACTGTTTTG 59.744 38.462 0.00 0.00 38.83 2.44
1434 1725 6.255887 GCTCGTAGATTATGCTACTGTTTTGT 59.744 38.462 0.00 0.00 38.83 2.83
1435 1726 7.515371 GCTCGTAGATTATGCTACTGTTTTGTC 60.515 40.741 0.00 0.00 38.83 3.18
1436 1727 7.317390 TCGTAGATTATGCTACTGTTTTGTCA 58.683 34.615 0.00 0.00 38.83 3.58
1437 1728 7.274904 TCGTAGATTATGCTACTGTTTTGTCAC 59.725 37.037 0.00 0.00 38.83 3.67
1438 1729 7.275779 CGTAGATTATGCTACTGTTTTGTCACT 59.724 37.037 0.00 0.00 38.83 3.41
1439 1730 7.602517 AGATTATGCTACTGTTTTGTCACTC 57.397 36.000 0.00 0.00 0.00 3.51
1440 1731 6.595716 AGATTATGCTACTGTTTTGTCACTCC 59.404 38.462 0.00 0.00 0.00 3.85
1441 1732 2.846193 TGCTACTGTTTTGTCACTCCC 58.154 47.619 0.00 0.00 0.00 4.30
1442 1733 2.152016 GCTACTGTTTTGTCACTCCCC 58.848 52.381 0.00 0.00 0.00 4.81
1443 1734 2.224548 GCTACTGTTTTGTCACTCCCCT 60.225 50.000 0.00 0.00 0.00 4.79
1444 1735 3.747708 GCTACTGTTTTGTCACTCCCCTT 60.748 47.826 0.00 0.00 0.00 3.95
1445 1736 3.382083 ACTGTTTTGTCACTCCCCTTT 57.618 42.857 0.00 0.00 0.00 3.11
1450 1741 4.081917 TGTTTTGTCACTCCCCTTTTTGTC 60.082 41.667 0.00 0.00 0.00 3.18
1456 1747 4.885325 GTCACTCCCCTTTTTGTCAACTTA 59.115 41.667 0.00 0.00 0.00 2.24
1460 1751 6.096282 CACTCCCCTTTTTGTCAACTTAAAGA 59.904 38.462 9.01 0.00 30.97 2.52
1474 1765 7.554476 GTCAACTTAAAGATTGGAAGCCTATCT 59.446 37.037 4.87 4.87 45.20 1.98
1493 1785 7.472100 GCCTATCTTCAGAAGGATTAGCTGTTA 60.472 40.741 10.42 0.00 31.64 2.41
1494 1786 8.424918 CCTATCTTCAGAAGGATTAGCTGTTAA 58.575 37.037 10.42 0.00 31.64 2.01
1529 1822 6.370442 TGTGCATTTATCTGTTGTAGTGGTAC 59.630 38.462 0.00 0.00 0.00 3.34
1536 1829 5.143376 TCTGTTGTAGTGGTACCTTTAGC 57.857 43.478 14.36 0.49 0.00 3.09
1552 1845 4.201561 CCTTTAGCGCGTTAGTTCTTGTAC 60.202 45.833 8.43 0.00 0.00 2.90
1574 1867 9.142014 TGTACATATTTTGGGCAATAAGCTTAT 57.858 29.630 13.37 13.37 44.79 1.73
1627 1920 3.423539 TCTAACTGATTTGGCTGCAGT 57.576 42.857 16.64 0.00 44.15 4.40
1752 2047 4.137543 CAAGTCTCTTAAGCAGGGTGTTT 58.862 43.478 0.00 0.00 0.00 2.83
1759 2054 6.206634 TCTCTTAAGCAGGGTGTTTGTTTATG 59.793 38.462 0.00 0.00 0.00 1.90
1808 2103 8.950210 TCAGGAAAATGTAATCATCTGAAACTC 58.050 33.333 0.00 0.00 32.27 3.01
1812 2107 9.994432 GAAAATGTAATCATCTGAAACTCGAAT 57.006 29.630 0.00 0.00 32.56 3.34
1823 2118 4.377021 TGAAACTCGAATACAAGTGCAGT 58.623 39.130 0.00 0.00 0.00 4.40
1855 2154 6.366604 GGTAGTTAGCACTCTCAGTTTTTCTC 59.633 42.308 0.00 0.00 34.06 2.87
1868 2167 5.238650 TCAGTTTTTCTCGGTGGAAATCTTC 59.761 40.000 0.00 0.00 35.51 2.87
1880 2180 4.271291 GTGGAAATCTTCTTCTGGCGTATC 59.729 45.833 0.00 0.00 0.00 2.24
1896 2196 7.556275 TCTGGCGTATCCAAATTTAGAAAATCT 59.444 33.333 0.00 0.00 46.01 2.40
2167 2469 7.609960 TGTTGAATATATGCCACAACAAATGT 58.390 30.769 17.46 0.00 44.53 2.71
2168 2470 8.093307 TGTTGAATATATGCCACAACAAATGTT 58.907 29.630 17.46 0.00 44.53 2.71
2169 2471 8.594687 GTTGAATATATGCCACAACAAATGTTC 58.405 33.333 14.59 0.00 41.46 3.18
2175 2477 4.573900 TGCCACAACAAATGTTCACTTTT 58.426 34.783 0.00 0.00 41.46 2.27
2176 2478 4.391216 TGCCACAACAAATGTTCACTTTTG 59.609 37.500 13.88 13.88 41.46 2.44
2178 2480 4.630940 CCACAACAAATGTTCACTTTTGCT 59.369 37.500 14.92 4.06 41.46 3.91
2180 2482 6.479660 CCACAACAAATGTTCACTTTTGCTAT 59.520 34.615 14.92 3.45 41.46 2.97
2182 2484 7.010367 CACAACAAATGTTCACTTTTGCTATGT 59.990 33.333 14.92 14.09 41.46 2.29
2216 2518 7.336931 ACAGTTTTGTTCTGATTGTTAGTCAGT 59.663 33.333 3.39 0.00 42.82 3.41
2218 2520 8.184192 AGTTTTGTTCTGATTGTTAGTCAGTTG 58.816 33.333 3.39 0.00 42.82 3.16
2220 2522 8.725405 TTTGTTCTGATTGTTAGTCAGTTGTA 57.275 30.769 3.39 0.00 42.82 2.41
2235 2537 8.410673 AGTCAGTTGTAGTTCTTGATCTTCTA 57.589 34.615 0.00 0.00 0.00 2.10
2239 2541 8.877779 CAGTTGTAGTTCTTGATCTTCTATTGG 58.122 37.037 0.00 0.00 0.00 3.16
2395 2698 5.465724 GGTTCAGTAAACGAAGACACATTCT 59.534 40.000 0.00 0.00 38.87 2.40
2406 2709 6.262273 ACGAAGACACATTCTTTGGTAATGTT 59.738 34.615 6.28 0.00 46.70 2.71
2408 2711 8.450964 CGAAGACACATTCTTTGGTAATGTTAT 58.549 33.333 0.00 0.00 45.24 1.89
2434 2737 8.840833 AAAATTTTGTTGTTGACTGGTAACTT 57.159 26.923 1.75 0.00 37.61 2.66
2448 2751 5.163652 ACTGGTAACTTTCACTGTTTTGAGC 60.164 40.000 0.00 0.00 37.61 4.26
2457 2760 5.929697 TCACTGTTTTGAGCTAATGAGTG 57.070 39.130 0.00 0.00 0.00 3.51
2470 2773 2.645838 ATGAGTGACCTGCTGTTGTT 57.354 45.000 0.00 0.00 0.00 2.83
2502 2805 5.163550 GCTTCTTTTGTTGTGACCCTAAAGT 60.164 40.000 0.00 0.00 0.00 2.66
2637 2940 3.479505 TTGGTTCAATAAACGATGGCG 57.520 42.857 0.00 0.00 44.79 5.69
2642 2945 3.063670 TCAATAAACGATGGCGCATTG 57.936 42.857 10.83 8.14 42.48 2.82
2643 2946 1.518102 CAATAAACGATGGCGCATTGC 59.482 47.619 10.83 0.00 42.48 3.56
2655 2960 2.286654 GGCGCATTGCTATTCAGACTTC 60.287 50.000 10.83 0.00 45.43 3.01
2657 2962 3.545624 GCGCATTGCTATTCAGACTTCTG 60.546 47.826 0.30 0.00 42.20 3.02
2660 2965 5.391310 CGCATTGCTATTCAGACTTCTGTTT 60.391 40.000 7.12 0.00 44.12 2.83
2662 2970 6.525976 GCATTGCTATTCAGACTTCTGTTTTC 59.474 38.462 6.15 0.00 44.12 2.29
2665 2973 5.180117 TGCTATTCAGACTTCTGTTTTCTGC 59.820 40.000 6.15 5.73 44.12 4.26
2674 2982 5.585390 ACTTCTGTTTTCTGCTTCAATGTG 58.415 37.500 0.00 0.00 0.00 3.21
2675 2983 4.572985 TCTGTTTTCTGCTTCAATGTGG 57.427 40.909 0.00 0.00 0.00 4.17
2679 2987 4.240096 GTTTTCTGCTTCAATGTGGGATG 58.760 43.478 0.00 0.00 0.00 3.51
2680 2988 2.885135 TCTGCTTCAATGTGGGATGT 57.115 45.000 0.00 0.00 0.00 3.06
2681 2989 2.439409 TCTGCTTCAATGTGGGATGTG 58.561 47.619 0.00 0.00 0.00 3.21
2682 2990 2.040145 TCTGCTTCAATGTGGGATGTGA 59.960 45.455 0.00 0.00 0.00 3.58
2684 2992 2.756207 TGCTTCAATGTGGGATGTGATG 59.244 45.455 0.00 0.00 0.00 3.07
2685 2993 2.480759 GCTTCAATGTGGGATGTGATGC 60.481 50.000 0.00 0.00 35.06 3.91
2696 3004 4.141756 TGGGATGTGATGCTTTTTGTGTTT 60.142 37.500 0.00 0.00 0.00 2.83
2698 3006 5.050159 GGGATGTGATGCTTTTTGTGTTTTC 60.050 40.000 0.00 0.00 0.00 2.29
2699 3007 5.523188 GGATGTGATGCTTTTTGTGTTTTCA 59.477 36.000 0.00 0.00 0.00 2.69
2700 3008 6.292488 GGATGTGATGCTTTTTGTGTTTTCAG 60.292 38.462 0.00 0.00 0.00 3.02
2701 3009 4.869297 TGTGATGCTTTTTGTGTTTTCAGG 59.131 37.500 0.00 0.00 0.00 3.86
2702 3010 5.108517 GTGATGCTTTTTGTGTTTTCAGGA 58.891 37.500 0.00 0.00 0.00 3.86
2703 3011 5.232838 GTGATGCTTTTTGTGTTTTCAGGAG 59.767 40.000 0.00 0.00 0.00 3.69
2710 3018 7.043391 GCTTTTTGTGTTTTCAGGAGTACAATC 60.043 37.037 0.00 0.00 0.00 2.67
2711 3019 7.639113 TTTTGTGTTTTCAGGAGTACAATCT 57.361 32.000 0.00 0.00 0.00 2.40
2713 3021 7.962964 TTGTGTTTTCAGGAGTACAATCTAG 57.037 36.000 0.00 0.00 0.00 2.43
2714 3022 6.464222 TGTGTTTTCAGGAGTACAATCTAGG 58.536 40.000 0.00 0.00 0.00 3.02
2716 3024 5.546499 TGTTTTCAGGAGTACAATCTAGGGT 59.454 40.000 0.00 0.00 0.00 4.34
2717 3025 6.727231 TGTTTTCAGGAGTACAATCTAGGGTA 59.273 38.462 0.00 0.00 0.00 3.69
2721 3029 5.432390 TCAGGAGTACAATCTAGGGTAGTCT 59.568 44.000 17.07 3.92 39.05 3.24
2723 3031 6.039941 CAGGAGTACAATCTAGGGTAGTCTTG 59.960 46.154 17.07 16.31 39.24 3.02
2732 3040 8.925338 CAATCTAGGGTAGTCTTGGTTAGTTAT 58.075 37.037 0.00 0.00 0.00 1.89
2736 3044 6.944096 AGGGTAGTCTTGGTTAGTTATGTTC 58.056 40.000 0.00 0.00 0.00 3.18
2742 3050 6.998673 AGTCTTGGTTAGTTATGTTCAGCTTT 59.001 34.615 0.00 0.00 0.00 3.51
2744 3052 6.770785 TCTTGGTTAGTTATGTTCAGCTTTGT 59.229 34.615 0.00 0.00 0.00 2.83
2745 3053 7.934665 TCTTGGTTAGTTATGTTCAGCTTTGTA 59.065 33.333 0.00 0.00 0.00 2.41
2746 3054 7.667043 TGGTTAGTTATGTTCAGCTTTGTAG 57.333 36.000 0.00 0.00 0.00 2.74
2747 3055 7.446769 TGGTTAGTTATGTTCAGCTTTGTAGA 58.553 34.615 0.00 0.00 0.00 2.59
2748 3056 8.100791 TGGTTAGTTATGTTCAGCTTTGTAGAT 58.899 33.333 0.00 0.00 0.00 1.98
2749 3057 8.604890 GGTTAGTTATGTTCAGCTTTGTAGATC 58.395 37.037 0.00 0.00 0.00 2.75
2750 3058 9.372369 GTTAGTTATGTTCAGCTTTGTAGATCT 57.628 33.333 0.00 0.00 0.00 2.75
2753 3061 9.289782 AGTTATGTTCAGCTTTGTAGATCTTTT 57.710 29.630 0.00 0.00 0.00 2.27
2757 3065 6.016276 TGTTCAGCTTTGTAGATCTTTTTCCC 60.016 38.462 0.00 0.00 0.00 3.97
2758 3066 4.695455 TCAGCTTTGTAGATCTTTTTCCCG 59.305 41.667 0.00 0.00 0.00 5.14
2765 3073 2.979240 AGATCTTTTTCCCGAGCTCAC 58.021 47.619 15.40 0.00 0.00 3.51
2770 3078 4.710324 TCTTTTTCCCGAGCTCACTTTTA 58.290 39.130 15.40 0.00 0.00 1.52
2774 3082 4.345859 TTCCCGAGCTCACTTTTAGAAA 57.654 40.909 15.40 0.00 0.00 2.52
2779 3115 4.458708 CGAGCTCACTTTTAGAAACTTGC 58.541 43.478 15.40 0.00 0.00 4.01
2792 3128 2.652941 AACTTGCTGTTTGGTGTGTG 57.347 45.000 0.00 0.00 34.84 3.82
2800 3136 3.254166 GCTGTTTGGTGTGTGATCTGATT 59.746 43.478 0.00 0.00 0.00 2.57
2802 3138 5.048782 GCTGTTTGGTGTGTGATCTGATTTA 60.049 40.000 0.00 0.00 0.00 1.40
2804 3140 5.049749 TGTTTGGTGTGTGATCTGATTTACG 60.050 40.000 0.00 0.00 0.00 3.18
2805 3141 3.000041 TGGTGTGTGATCTGATTTACGC 59.000 45.455 10.65 10.65 0.00 4.42
2849 3208 7.171447 TGGATTTTTAAATTTGCAGAACACG 57.829 32.000 0.00 0.00 0.00 4.49
2882 3241 1.361204 TTGCCCTGAGGAAGATGTCA 58.639 50.000 0.00 0.00 33.47 3.58
2883 3242 1.588239 TGCCCTGAGGAAGATGTCAT 58.412 50.000 0.00 0.00 33.47 3.06
2885 3244 2.295885 GCCCTGAGGAAGATGTCATTG 58.704 52.381 0.00 0.00 33.47 2.82
2891 3250 5.474532 CCTGAGGAAGATGTCATTGAACAAA 59.525 40.000 0.00 0.00 31.81 2.83
2933 3292 1.321805 TGTTGGCACACAAGCAAGCT 61.322 50.000 0.00 0.00 40.38 3.74
2966 3325 1.964373 GTACTGCCGTGGTGTTGGG 60.964 63.158 0.00 0.00 0.00 4.12
2996 3355 1.302993 GGTTAAGAACCGCCAGCCA 60.303 57.895 0.00 0.00 42.62 4.75
3050 3409 5.172205 GCTAAGTTCGTTCTGGATCTTCTT 58.828 41.667 0.00 0.00 30.71 2.52
3059 3418 4.801330 TCTGGATCTTCTTAAGAACGCA 57.199 40.909 13.99 1.88 41.63 5.24
3079 3438 0.251354 GAGAGCAATGCTGAGGTCCA 59.749 55.000 14.48 0.00 39.88 4.02
3090 3449 3.069586 TGCTGAGGTCCATTATCTTACCG 59.930 47.826 0.00 0.00 37.09 4.02
3098 3457 3.704566 TCCATTATCTTACCGTGACTGCT 59.295 43.478 0.00 0.00 0.00 4.24
3106 3465 2.614829 ACCGTGACTGCTGTAGTTTT 57.385 45.000 0.00 0.00 40.53 2.43
3110 3469 3.498397 CCGTGACTGCTGTAGTTTTCAAT 59.502 43.478 0.00 0.00 40.53 2.57
3117 3476 5.536161 ACTGCTGTAGTTTTCAATTCCATGT 59.464 36.000 0.00 0.00 35.67 3.21
3120 3479 7.367285 TGCTGTAGTTTTCAATTCCATGTTAC 58.633 34.615 0.00 0.00 0.00 2.50
3124 3483 8.919145 TGTAGTTTTCAATTCCATGTTACCTTT 58.081 29.630 0.00 0.00 0.00 3.11
3125 3484 9.406828 GTAGTTTTCAATTCCATGTTACCTTTC 57.593 33.333 0.00 0.00 0.00 2.62
3138 3499 9.594478 CCATGTTACCTTTCCATTTTTATAACC 57.406 33.333 0.00 0.00 0.00 2.85
3174 3535 3.744660 ACAGGTGAAAGGTCTTGATGTC 58.255 45.455 0.00 0.00 0.00 3.06
3278 3639 5.181622 TCAACCGTAAGTTTGTTGAAACACT 59.818 36.000 10.91 0.00 43.76 3.55
3298 3660 6.553524 ACACTCGCTTCATCTTAGTAGTAAC 58.446 40.000 0.00 0.00 0.00 2.50
3303 3665 6.525628 TCGCTTCATCTTAGTAGTAACGTTTG 59.474 38.462 5.91 0.00 0.00 2.93
3305 3667 7.061441 CGCTTCATCTTAGTAGTAACGTTTGAA 59.939 37.037 5.91 5.35 0.00 2.69
3311 3673 8.597662 TCTTAGTAGTAACGTTTGAAGCAATT 57.402 30.769 5.91 0.00 0.00 2.32
3318 3680 7.894847 AGTAACGTTTGAAGCAATTTTTGAAG 58.105 30.769 5.91 0.00 0.00 3.02
3334 3696 3.103447 TGAAGATTGCTCATAGCTCCG 57.897 47.619 0.00 0.00 42.97 4.63
3366 3728 0.620556 CAGCCTACATGTCCAACCCT 59.379 55.000 0.00 0.00 0.00 4.34
3375 3737 0.539438 TGTCCAACCCTTGCCACATC 60.539 55.000 0.00 0.00 0.00 3.06
3420 3782 1.079057 GCCGGTGAAGAAGGAGGTC 60.079 63.158 1.90 0.00 0.00 3.85
3421 3783 1.215647 CCGGTGAAGAAGGAGGTCG 59.784 63.158 0.00 0.00 0.00 4.79
3423 3785 1.079057 GGTGAAGAAGGAGGTCGGC 60.079 63.158 0.00 0.00 0.00 5.54
3431 3793 1.740025 GAAGGAGGTCGGCATTCTTTG 59.260 52.381 0.00 0.00 0.00 2.77
3449 3819 5.430886 TCTTTGCATTTATCTCAGCTGCTA 58.569 37.500 9.47 0.00 34.02 3.49
3450 3820 6.060136 TCTTTGCATTTATCTCAGCTGCTAT 58.940 36.000 9.47 7.35 34.02 2.97
3455 3825 7.219322 TGCATTTATCTCAGCTGCTATTTCTA 58.781 34.615 9.47 0.00 34.02 2.10
3457 3827 8.176365 GCATTTATCTCAGCTGCTATTTCTATG 58.824 37.037 9.47 6.95 0.00 2.23
3494 3864 7.606073 TCTTGTTGTATATGCTGTTTTGAGCTA 59.394 33.333 0.00 0.00 39.90 3.32
3584 3954 5.088026 AGGAAGCTCTACATAACCTATCCC 58.912 45.833 0.00 0.00 0.00 3.85
3602 3972 1.270358 CCCCCTATTCGTTAGAGCAGC 60.270 57.143 0.00 0.00 0.00 5.25
3688 4061 6.076981 AGCTCATACTTTGTGAAACCTTTG 57.923 37.500 0.00 0.00 34.36 2.77
3689 4062 5.827797 AGCTCATACTTTGTGAAACCTTTGA 59.172 36.000 0.00 0.00 34.36 2.69
3690 4063 6.491403 AGCTCATACTTTGTGAAACCTTTGAT 59.509 34.615 0.00 0.00 34.36 2.57
3691 4064 6.583806 GCTCATACTTTGTGAAACCTTTGATG 59.416 38.462 0.00 0.00 34.36 3.07
3692 4065 7.522073 GCTCATACTTTGTGAAACCTTTGATGA 60.522 37.037 0.00 0.00 34.36 2.92
3693 4066 8.408043 TCATACTTTGTGAAACCTTTGATGAT 57.592 30.769 0.00 0.00 34.36 2.45
3744 4119 7.344910 TGTGTTTTGGAATATTTTTCATCGC 57.655 32.000 0.00 0.00 0.00 4.58
3754 4129 8.534778 GGAATATTTTTCATCGCATGAGTTTTC 58.465 33.333 0.00 0.00 40.94 2.29
3755 4130 7.992180 ATATTTTTCATCGCATGAGTTTTCC 57.008 32.000 0.00 0.00 40.94 3.13
3766 4141 5.739161 CGCATGAGTTTTCCTTTGCTATTAC 59.261 40.000 0.00 0.00 33.02 1.89
3767 4142 6.403636 CGCATGAGTTTTCCTTTGCTATTACT 60.404 38.462 0.00 0.00 33.02 2.24
3768 4143 6.749118 GCATGAGTTTTCCTTTGCTATTACTG 59.251 38.462 0.00 0.00 32.66 2.74
3769 4144 7.575720 GCATGAGTTTTCCTTTGCTATTACTGT 60.576 37.037 0.00 0.00 32.66 3.55
3770 4145 7.817418 TGAGTTTTCCTTTGCTATTACTGTT 57.183 32.000 0.00 0.00 0.00 3.16
3789 4183 4.188462 TGTTTGATCCCTACGTTATGCTG 58.812 43.478 0.00 0.00 0.00 4.41
3804 4198 0.179076 TGCTGTCCCGCATCAGTATG 60.179 55.000 0.00 0.00 34.44 2.39
3819 4213 7.435192 CGCATCAGTATGTAACTTAGTTGATGA 59.565 37.037 19.11 10.03 36.45 2.92
3823 4217 9.990360 TCAGTATGTAACTTAGTTGATGAAACA 57.010 29.630 8.00 3.32 37.53 2.83
3857 4251 2.214376 AAAGAATCGCCCACATCCAA 57.786 45.000 0.00 0.00 0.00 3.53
3866 4260 3.694072 TCGCCCACATCCAAGATTTTAAG 59.306 43.478 0.00 0.00 0.00 1.85
3867 4261 3.734902 CGCCCACATCCAAGATTTTAAGC 60.735 47.826 0.00 0.00 0.00 3.09
3869 4263 3.438360 CCACATCCAAGATTTTAAGCGC 58.562 45.455 0.00 0.00 0.00 5.92
3871 4265 2.427095 ACATCCAAGATTTTAAGCGCCC 59.573 45.455 2.29 0.00 0.00 6.13
3872 4266 1.091537 TCCAAGATTTTAAGCGCCCG 58.908 50.000 2.29 0.00 0.00 6.13
3873 4267 0.808755 CCAAGATTTTAAGCGCCCGT 59.191 50.000 2.29 0.00 0.00 5.28
3874 4268 1.201414 CCAAGATTTTAAGCGCCCGTT 59.799 47.619 2.29 0.00 0.00 4.44
3875 4269 2.420722 CCAAGATTTTAAGCGCCCGTTA 59.579 45.455 2.29 0.00 0.00 3.18
3876 4270 3.066203 CCAAGATTTTAAGCGCCCGTTAT 59.934 43.478 2.29 0.00 0.00 1.89
3877 4271 4.273969 CCAAGATTTTAAGCGCCCGTTATA 59.726 41.667 2.29 0.00 0.00 0.98
3878 4272 5.202640 CAAGATTTTAAGCGCCCGTTATAC 58.797 41.667 2.29 0.00 0.00 1.47
3879 4273 4.700700 AGATTTTAAGCGCCCGTTATACT 58.299 39.130 2.29 0.00 0.00 2.12
3880 4274 5.846203 AGATTTTAAGCGCCCGTTATACTA 58.154 37.500 2.29 0.00 0.00 1.82
3881 4275 6.461640 AGATTTTAAGCGCCCGTTATACTAT 58.538 36.000 2.29 0.00 0.00 2.12
3882 4276 6.932960 AGATTTTAAGCGCCCGTTATACTATT 59.067 34.615 2.29 0.00 0.00 1.73
3883 4277 6.923928 TTTTAAGCGCCCGTTATACTATTT 57.076 33.333 2.29 0.00 0.00 1.40
3884 4278 6.923928 TTTAAGCGCCCGTTATACTATTTT 57.076 33.333 2.29 0.00 0.00 1.82
3885 4279 6.529463 TTAAGCGCCCGTTATACTATTTTC 57.471 37.500 2.29 0.00 0.00 2.29
3886 4280 4.062677 AGCGCCCGTTATACTATTTTCA 57.937 40.909 2.29 0.00 0.00 2.69
3887 4281 4.444536 AGCGCCCGTTATACTATTTTCAA 58.555 39.130 2.29 0.00 0.00 2.69
3895 4289 7.413219 CCCGTTATACTATTTTCAACTTTGCGA 60.413 37.037 0.00 0.00 0.00 5.10
3902 4296 4.647424 TTTTCAACTTTGCGATGTCCTT 57.353 36.364 0.00 0.00 0.00 3.36
3911 4305 1.337728 TGCGATGTCCTTGACGAACAT 60.338 47.619 0.00 0.00 36.37 2.71
3915 4309 3.001070 CGATGTCCTTGACGAACATAACG 60.001 47.826 0.00 0.00 33.91 3.18
3916 4310 2.063266 TGTCCTTGACGAACATAACGC 58.937 47.619 0.00 0.00 34.95 4.84
3944 4539 2.894126 CCATAGATGGCTAGTTCCGACT 59.106 50.000 0.00 0.00 41.75 4.18
3964 4559 2.707849 CCAGGCTGCTGGCAATGAC 61.708 63.158 19.23 0.00 44.01 3.06
3978 4573 2.987282 AATGACGAGCGCACACACCA 62.987 55.000 11.47 0.00 0.00 4.17
3981 4576 2.738139 CGAGCGCACACACCATCA 60.738 61.111 11.47 0.00 0.00 3.07
4001 4596 0.474184 ATATGGCCCTGAAGAACGGG 59.526 55.000 0.00 0.00 44.27 5.28
4030 4625 1.153066 TGCAACGCAGGACCTCAAA 60.153 52.632 0.00 0.00 33.32 2.69
4031 4626 1.282875 GCAACGCAGGACCTCAAAC 59.717 57.895 0.00 0.00 0.00 2.93
4032 4627 1.166531 GCAACGCAGGACCTCAAACT 61.167 55.000 0.00 0.00 0.00 2.66
4033 4628 1.876416 GCAACGCAGGACCTCAAACTA 60.876 52.381 0.00 0.00 0.00 2.24
4034 4629 2.489971 CAACGCAGGACCTCAAACTAA 58.510 47.619 0.00 0.00 0.00 2.24
4083 4699 2.100418 GCAATCTGATCTTGAAAGGGCC 59.900 50.000 0.00 0.00 0.00 5.80
4085 4701 0.253044 TCTGATCTTGAAAGGGCCGG 59.747 55.000 0.00 0.00 0.00 6.13
4103 6612 2.434884 CCTGCTCGCCGACATTGT 60.435 61.111 0.00 0.00 0.00 2.71
4122 6631 1.697982 GTGAGGGCGGGTAATAGGATT 59.302 52.381 0.00 0.00 0.00 3.01
4137 6692 0.663153 GGATTTGTAGGCGACATGGC 59.337 55.000 0.07 0.00 45.27 4.40
4202 6781 1.000233 TTACGGGAGGGAAGGCGTA 60.000 57.895 0.00 0.00 0.00 4.42
4224 6803 1.198094 TGGGGATCAGGACGAGCAAA 61.198 55.000 0.00 0.00 0.00 3.68
4284 6863 2.965831 TGACGGCTAGGAGCTATCATTT 59.034 45.455 0.00 0.00 41.99 2.32
4320 6899 8.690203 TTTTCTGTCATGGAACTTGATTAAGA 57.310 30.769 3.94 0.00 37.36 2.10
4321 6900 7.912056 TTCTGTCATGGAACTTGATTAAGAG 57.088 36.000 3.94 0.00 37.36 2.85
4416 7001 7.492994 TGTTAGCAAAAGGTTCACAAATTTACC 59.507 33.333 0.28 0.28 0.00 2.85
4419 7004 5.276631 GCAAAAGGTTCACAAATTTACCACG 60.277 40.000 9.89 0.00 33.02 4.94
4420 7005 4.577834 AAGGTTCACAAATTTACCACGG 57.422 40.909 9.89 0.00 33.02 4.94
4421 7006 2.888414 AGGTTCACAAATTTACCACGGG 59.112 45.455 9.89 0.00 33.02 5.28
4435 7020 0.238289 CACGGGAAGACAACATGCAC 59.762 55.000 0.00 0.00 0.00 4.57
4437 7022 0.606401 CGGGAAGACAACATGCACCT 60.606 55.000 0.00 0.00 0.00 4.00
4478 7065 5.981088 ATGAAATTATCATTGCGGGCATA 57.019 34.783 0.00 0.00 46.85 3.14
4504 7091 1.971695 GTTTCTGACGCCCCCTTGG 60.972 63.158 0.00 0.00 37.09 3.61
4538 7125 2.838202 ACCCATAATAGGCATCTACCGG 59.162 50.000 0.00 0.00 33.69 5.28
4583 7170 1.026182 GTGGATGACTTCGCCATGCA 61.026 55.000 0.00 0.00 39.48 3.96
4635 7222 9.377312 AGTCTTAGAATAAAGAGAGATTGCAAC 57.623 33.333 0.00 0.00 36.19 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.493350 CCACGAGCAGTAAATCTATGCCT 60.493 47.826 0.00 0.00 40.89 4.75
1 2 2.802816 CCACGAGCAGTAAATCTATGCC 59.197 50.000 0.00 0.00 40.89 4.40
2 3 2.802816 CCCACGAGCAGTAAATCTATGC 59.197 50.000 0.00 0.00 40.29 3.14
3 4 3.393800 CCCCACGAGCAGTAAATCTATG 58.606 50.000 0.00 0.00 0.00 2.23
4 5 2.224305 GCCCCACGAGCAGTAAATCTAT 60.224 50.000 0.00 0.00 0.00 1.98
5 6 1.138266 GCCCCACGAGCAGTAAATCTA 59.862 52.381 0.00 0.00 0.00 1.98
9 10 1.302192 GTGCCCCACGAGCAGTAAA 60.302 57.895 0.00 0.00 41.87 2.01
10 11 2.345991 GTGCCCCACGAGCAGTAA 59.654 61.111 0.00 0.00 41.87 2.24
11 12 2.920384 TGTGCCCCACGAGCAGTA 60.920 61.111 0.00 0.00 41.87 2.74
13 14 2.809861 AATCTGTGCCCCACGAGCAG 62.810 60.000 0.00 0.00 41.87 4.24
14 15 2.410322 AAATCTGTGCCCCACGAGCA 62.410 55.000 0.00 0.00 37.14 4.26
15 16 1.675641 AAATCTGTGCCCCACGAGC 60.676 57.895 0.00 0.00 37.14 5.03
16 17 1.926511 GCAAATCTGTGCCCCACGAG 61.927 60.000 0.00 0.00 38.66 4.18
18 19 1.526575 AAGCAAATCTGTGCCCCACG 61.527 55.000 0.00 0.00 46.14 4.94
19 20 1.202348 GTAAGCAAATCTGTGCCCCAC 59.798 52.381 0.00 0.00 46.14 4.61
21 22 1.544724 TGTAAGCAAATCTGTGCCCC 58.455 50.000 0.00 0.00 46.14 5.80
22 23 2.754552 TCATGTAAGCAAATCTGTGCCC 59.245 45.455 0.00 0.00 46.14 5.36
23 24 3.691118 TCTCATGTAAGCAAATCTGTGCC 59.309 43.478 0.00 0.00 46.14 5.01
25 26 4.201891 GCCTCTCATGTAAGCAAATCTGTG 60.202 45.833 0.00 0.00 0.00 3.66
26 27 3.944015 GCCTCTCATGTAAGCAAATCTGT 59.056 43.478 0.00 0.00 0.00 3.41
27 28 3.943381 TGCCTCTCATGTAAGCAAATCTG 59.057 43.478 0.00 0.00 0.00 2.90
28 29 3.944015 GTGCCTCTCATGTAAGCAAATCT 59.056 43.478 0.00 0.00 34.79 2.40
29 30 3.242543 CGTGCCTCTCATGTAAGCAAATC 60.243 47.826 0.00 0.00 34.79 2.17
30 31 2.679837 CGTGCCTCTCATGTAAGCAAAT 59.320 45.455 0.00 0.00 34.79 2.32
31 32 2.076100 CGTGCCTCTCATGTAAGCAAA 58.924 47.619 0.00 0.00 34.79 3.68
32 33 1.675714 CCGTGCCTCTCATGTAAGCAA 60.676 52.381 0.00 0.00 34.79 3.91
33 34 0.108186 CCGTGCCTCTCATGTAAGCA 60.108 55.000 0.00 0.00 0.00 3.91
34 35 1.432270 GCCGTGCCTCTCATGTAAGC 61.432 60.000 0.00 0.00 0.00 3.09
35 36 0.176680 AGCCGTGCCTCTCATGTAAG 59.823 55.000 0.00 0.00 0.00 2.34
36 37 0.108186 CAGCCGTGCCTCTCATGTAA 60.108 55.000 0.00 0.00 0.00 2.41
37 38 1.257750 ACAGCCGTGCCTCTCATGTA 61.258 55.000 0.00 0.00 0.00 2.29
39 40 2.104859 CACAGCCGTGCCTCTCATG 61.105 63.158 0.00 0.00 36.06 3.07
40 41 2.267006 CACAGCCGTGCCTCTCAT 59.733 61.111 0.00 0.00 36.06 2.90
57 58 2.793278 TTTTTCCTTTTGCGAGAGGC 57.207 45.000 5.60 0.00 43.96 4.70
97 98 1.374758 GTGCCTCTCGTGGAACAGG 60.375 63.158 0.00 0.00 46.70 4.00
98 99 1.367471 TGTGCCTCTCGTGGAACAG 59.633 57.895 2.42 0.00 40.57 3.16
99 100 1.112916 TCTGTGCCTCTCGTGGAACA 61.113 55.000 5.77 5.77 43.07 3.18
100 101 0.247736 ATCTGTGCCTCTCGTGGAAC 59.752 55.000 0.00 0.00 36.17 3.62
105 106 3.511934 AGAAGTAAATCTGTGCCTCTCGT 59.488 43.478 0.00 0.00 0.00 4.18
128 404 1.675641 GCAAATCCGTGCCTCCACT 60.676 57.895 0.00 0.00 39.86 4.00
152 428 0.601558 TTTTCGAGAGGGACGGTCTG 59.398 55.000 8.23 0.00 0.00 3.51
153 429 1.272769 CTTTTTCGAGAGGGACGGTCT 59.727 52.381 8.23 0.00 0.00 3.85
222 500 6.481976 CGTGTAAGAAAATATGTGCCTCCATA 59.518 38.462 0.00 0.00 0.00 2.74
223 501 5.296780 CGTGTAAGAAAATATGTGCCTCCAT 59.703 40.000 0.00 0.00 0.00 3.41
359 643 2.426522 TCTCTCATGGCAGGAAAAACG 58.573 47.619 2.54 0.00 0.00 3.60
454 740 7.169982 CCACGAGAAGTAAATCCATGTCTATTC 59.830 40.741 0.00 0.00 0.00 1.75
488 774 1.266718 TGCCACTCGTGAAAGCAAATC 59.733 47.619 0.00 0.00 0.00 2.17
499 785 4.640855 CACGACCGTGCCACTCGT 62.641 66.667 9.69 6.34 41.23 4.18
536 822 2.180432 AAAAACGAGTAGGGAGCACC 57.820 50.000 0.00 0.00 40.67 5.01
572 859 6.217294 AGGTTTTGACGAACTTTGTTTTTCA 58.783 32.000 0.00 0.00 0.00 2.69
579 866 5.619607 CGTTGATAGGTTTTGACGAACTTTG 59.380 40.000 0.00 0.00 32.73 2.77
633 920 5.558888 GCGCATAACATATTTAGCGTGTAAC 59.441 40.000 0.30 0.00 46.09 2.50
646 933 5.208463 TCCAATGACTAGCGCATAACATA 57.792 39.130 11.47 0.00 0.00 2.29
652 939 0.178767 TGCTCCAATGACTAGCGCAT 59.821 50.000 11.47 0.00 39.14 4.73
659 946 3.006967 ACGACTAAACTGCTCCAATGACT 59.993 43.478 0.00 0.00 0.00 3.41
663 950 3.074412 CCAACGACTAAACTGCTCCAAT 58.926 45.455 0.00 0.00 0.00 3.16
681 968 3.164268 CCATCAAACCAGGTCAATCCAA 58.836 45.455 0.00 0.00 39.02 3.53
687 974 1.001974 CTCGTCCATCAAACCAGGTCA 59.998 52.381 0.00 0.00 0.00 4.02
694 981 6.145338 TCCTACTAATCTCGTCCATCAAAC 57.855 41.667 0.00 0.00 0.00 2.93
698 985 5.392595 GCAGATCCTACTAATCTCGTCCATC 60.393 48.000 0.00 0.00 31.05 3.51
808 1095 3.662247 TCGGTTGTCCTCTTCTTCTTC 57.338 47.619 0.00 0.00 0.00 2.87
809 1096 3.835395 AGATCGGTTGTCCTCTTCTTCTT 59.165 43.478 0.00 0.00 0.00 2.52
826 1113 1.142748 GACCAGCAGACCCAGATCG 59.857 63.158 0.00 0.00 0.00 3.69
827 1114 0.177604 CAGACCAGCAGACCCAGATC 59.822 60.000 0.00 0.00 0.00 2.75
867 1158 4.141574 TGAAGCCCAGTTACAAACAGTAGT 60.142 41.667 0.00 0.00 33.43 2.73
921 1212 1.644786 CGGACTTCGAATGGGCCAAC 61.645 60.000 11.89 7.21 42.43 3.77
937 1228 3.134081 CCTAGAAGCAAAACCCTATCGGA 59.866 47.826 0.00 0.00 34.64 4.55
982 1273 4.678743 AAGGTTGGGGGAAGCGGC 62.679 66.667 0.00 0.00 37.13 6.53
1072 1363 4.779733 GGCCGTGAGAGGGAGGGA 62.780 72.222 0.00 0.00 0.00 4.20
1078 1369 3.827898 GGAGACGGCCGTGAGAGG 61.828 72.222 39.65 1.75 0.00 3.69
1079 1370 3.827898 GGGAGACGGCCGTGAGAG 61.828 72.222 39.65 2.70 0.00 3.20
1092 1383 0.105039 GGAACATAGACGCTGGGGAG 59.895 60.000 0.00 0.00 0.00 4.30
1130 1421 2.737783 TGAACGACAAACGAAACACACT 59.262 40.909 0.00 0.00 45.77 3.55
1144 1435 1.535462 CACCTGGAAACCATGAACGAC 59.465 52.381 0.00 0.00 30.82 4.34
1151 1442 3.650942 TGAGTACTTCACCTGGAAACCAT 59.349 43.478 0.00 0.00 34.44 3.55
1214 1505 2.187958 ACAAATCCATCCGTCTCCTCA 58.812 47.619 0.00 0.00 0.00 3.86
1340 1631 0.813821 GGGAGCTCACCTTGAAATGC 59.186 55.000 17.19 0.00 0.00 3.56
1369 1660 1.727880 CCGTTGAAAAGCGTTATCGGA 59.272 47.619 10.10 0.00 39.17 4.55
1420 1711 3.412386 GGGAGTGACAAAACAGTAGCAT 58.588 45.455 0.00 0.00 0.00 3.79
1423 1714 3.771577 AGGGGAGTGACAAAACAGTAG 57.228 47.619 0.00 0.00 0.00 2.57
1424 1715 4.513406 AAAGGGGAGTGACAAAACAGTA 57.487 40.909 0.00 0.00 0.00 2.74
1425 1716 3.382083 AAAGGGGAGTGACAAAACAGT 57.618 42.857 0.00 0.00 0.00 3.55
1426 1717 4.081697 ACAAAAAGGGGAGTGACAAAACAG 60.082 41.667 0.00 0.00 0.00 3.16
1427 1718 3.835395 ACAAAAAGGGGAGTGACAAAACA 59.165 39.130 0.00 0.00 0.00 2.83
1428 1719 4.081917 TGACAAAAAGGGGAGTGACAAAAC 60.082 41.667 0.00 0.00 0.00 2.43
1429 1720 4.090090 TGACAAAAAGGGGAGTGACAAAA 58.910 39.130 0.00 0.00 0.00 2.44
1430 1721 3.702792 TGACAAAAAGGGGAGTGACAAA 58.297 40.909 0.00 0.00 0.00 2.83
1431 1722 3.374042 TGACAAAAAGGGGAGTGACAA 57.626 42.857 0.00 0.00 0.00 3.18
1432 1723 3.020984 GTTGACAAAAAGGGGAGTGACA 58.979 45.455 0.00 0.00 0.00 3.58
1433 1724 3.288092 AGTTGACAAAAAGGGGAGTGAC 58.712 45.455 0.00 0.00 0.00 3.67
1434 1725 3.662759 AGTTGACAAAAAGGGGAGTGA 57.337 42.857 0.00 0.00 0.00 3.41
1435 1726 5.845391 TTAAGTTGACAAAAAGGGGAGTG 57.155 39.130 0.00 0.00 0.00 3.51
1436 1727 6.192044 TCTTTAAGTTGACAAAAAGGGGAGT 58.808 36.000 9.77 0.00 31.37 3.85
1437 1728 6.709018 TCTTTAAGTTGACAAAAAGGGGAG 57.291 37.500 9.77 0.00 31.37 4.30
1438 1729 7.418483 CCAATCTTTAAGTTGACAAAAAGGGGA 60.418 37.037 9.77 0.00 31.37 4.81
1439 1730 6.705825 CCAATCTTTAAGTTGACAAAAAGGGG 59.294 38.462 9.77 6.77 31.37 4.79
1440 1731 7.496747 TCCAATCTTTAAGTTGACAAAAAGGG 58.503 34.615 9.77 5.27 31.37 3.95
1441 1732 8.940768 TTCCAATCTTTAAGTTGACAAAAAGG 57.059 30.769 9.77 0.00 31.37 3.11
1442 1733 8.542953 GCTTCCAATCTTTAAGTTGACAAAAAG 58.457 33.333 4.98 4.98 0.00 2.27
1443 1734 7.494298 GGCTTCCAATCTTTAAGTTGACAAAAA 59.506 33.333 8.21 0.00 0.00 1.94
1444 1735 6.983890 GGCTTCCAATCTTTAAGTTGACAAAA 59.016 34.615 8.21 0.00 0.00 2.44
1445 1736 6.323739 AGGCTTCCAATCTTTAAGTTGACAAA 59.676 34.615 8.21 2.00 0.00 2.83
1450 1741 7.872113 AGATAGGCTTCCAATCTTTAAGTTG 57.128 36.000 0.00 0.00 0.00 3.16
1474 1765 5.013704 TGGGTTAACAGCTAATCCTTCTGAA 59.986 40.000 8.10 0.00 40.98 3.02
1529 1822 2.735134 ACAAGAACTAACGCGCTAAAGG 59.265 45.455 5.73 0.00 0.00 3.11
1536 1829 6.681178 CCAAAATATGTACAAGAACTAACGCG 59.319 38.462 3.53 3.53 0.00 6.01
1552 1845 6.875195 CCCATAAGCTTATTGCCCAAAATATG 59.125 38.462 16.46 3.35 44.23 1.78
1574 1867 8.804912 TCAAACTAAACTTTAACTACAACCCA 57.195 30.769 0.00 0.00 0.00 4.51
1613 1906 0.250252 TCGTGACTGCAGCCAAATCA 60.250 50.000 15.27 6.76 0.00 2.57
1627 1920 4.722526 ATGGGATTATGGGAATTCGTGA 57.277 40.909 0.00 0.00 0.00 4.35
1723 2018 5.279506 CCCTGCTTAAGAGACTTGTCACTTA 60.280 44.000 6.67 13.77 0.00 2.24
1738 2033 5.830991 ACTCATAAACAAACACCCTGCTTAA 59.169 36.000 0.00 0.00 0.00 1.85
1759 2054 6.207025 TGAGTCTAGAGGACACTGTTTAACTC 59.793 42.308 0.00 0.00 46.72 3.01
1771 2066 5.669164 ACATTTTCCTGAGTCTAGAGGAC 57.331 43.478 0.00 0.00 44.80 3.85
1808 2103 4.457810 CACAGAAACTGCACTTGTATTCG 58.542 43.478 0.00 0.00 34.37 3.34
1812 2107 3.275617 ACCACAGAAACTGCACTTGTA 57.724 42.857 0.00 0.00 34.37 2.41
1823 2118 4.587262 TGAGAGTGCTAACTACCACAGAAA 59.413 41.667 0.00 0.00 36.52 2.52
1841 2136 3.386768 TCCACCGAGAAAAACTGAGAG 57.613 47.619 0.00 0.00 0.00 3.20
1855 2154 1.740025 GCCAGAAGAAGATTTCCACCG 59.260 52.381 0.00 0.00 0.00 4.94
1985 2287 3.454812 AGATTACGGGGACACTGCTTATT 59.545 43.478 0.00 0.00 0.00 1.40
2114 2416 5.690865 ACCCAACATTTAACAGTGAAGAGA 58.309 37.500 0.00 0.00 0.00 3.10
2116 2418 6.153680 ACAAACCCAACATTTAACAGTGAAGA 59.846 34.615 0.00 0.00 0.00 2.87
2152 2454 4.405116 AAGTGAACATTTGTTGTGGCAT 57.595 36.364 0.00 0.00 38.99 4.40
2153 2455 3.883830 AAGTGAACATTTGTTGTGGCA 57.116 38.095 0.00 0.00 38.99 4.92
2167 2469 8.800370 TGTATCCATAACATAGCAAAAGTGAA 57.200 30.769 0.00 0.00 0.00 3.18
2168 2470 8.046708 ACTGTATCCATAACATAGCAAAAGTGA 58.953 33.333 0.00 0.00 0.00 3.41
2169 2471 8.213518 ACTGTATCCATAACATAGCAAAAGTG 57.786 34.615 0.00 0.00 0.00 3.16
2175 2477 8.574251 AACAAAACTGTATCCATAACATAGCA 57.426 30.769 0.00 0.00 0.00 3.49
2176 2478 8.893727 AGAACAAAACTGTATCCATAACATAGC 58.106 33.333 0.00 0.00 0.00 2.97
2178 2480 9.952030 TCAGAACAAAACTGTATCCATAACATA 57.048 29.630 0.00 0.00 36.81 2.29
2180 2482 8.862325 ATCAGAACAAAACTGTATCCATAACA 57.138 30.769 0.00 0.00 36.81 2.41
2182 2484 9.295825 ACAATCAGAACAAAACTGTATCCATAA 57.704 29.630 0.00 0.00 36.81 1.90
2196 2498 7.985184 ACTACAACTGACTAACAATCAGAACAA 59.015 33.333 8.92 0.00 45.46 2.83
2197 2499 7.497595 ACTACAACTGACTAACAATCAGAACA 58.502 34.615 8.92 0.00 45.46 3.18
2198 2500 7.948278 ACTACAACTGACTAACAATCAGAAC 57.052 36.000 8.92 0.00 45.46 3.01
2200 2502 7.952671 AGAACTACAACTGACTAACAATCAGA 58.047 34.615 8.92 0.00 45.46 3.27
2204 2506 9.209175 GATCAAGAACTACAACTGACTAACAAT 57.791 33.333 0.00 0.00 0.00 2.71
2220 2522 7.930865 GCTGATACCAATAGAAGATCAAGAACT 59.069 37.037 0.00 0.00 0.00 3.01
2408 2711 9.930693 AAGTTACCAGTCAACAACAAAATTTTA 57.069 25.926 2.44 0.00 0.00 1.52
2409 2712 8.840833 AAGTTACCAGTCAACAACAAAATTTT 57.159 26.923 0.00 0.00 0.00 1.82
2410 2713 8.840833 AAAGTTACCAGTCAACAACAAAATTT 57.159 26.923 0.00 0.00 0.00 1.82
2411 2714 8.091449 TGAAAGTTACCAGTCAACAACAAAATT 58.909 29.630 0.00 0.00 0.00 1.82
2412 2715 7.544217 GTGAAAGTTACCAGTCAACAACAAAAT 59.456 33.333 0.00 0.00 0.00 1.82
2419 2722 4.839121 ACAGTGAAAGTTACCAGTCAACA 58.161 39.130 0.00 0.00 0.00 3.33
2433 2736 6.542005 TCACTCATTAGCTCAAAACAGTGAAA 59.458 34.615 0.00 0.00 36.85 2.69
2434 2737 6.017934 GTCACTCATTAGCTCAAAACAGTGAA 60.018 38.462 12.12 0.00 40.40 3.18
2448 2751 3.668447 ACAACAGCAGGTCACTCATTAG 58.332 45.455 0.00 0.00 0.00 1.73
2457 2760 0.312102 GCTCCAAACAACAGCAGGTC 59.688 55.000 0.00 0.00 33.06 3.85
2470 2773 2.760092 ACAACAAAAGAAGCAGCTCCAA 59.240 40.909 0.00 0.00 0.00 3.53
2530 2833 1.298859 GCTTACGGGGACACTGCTTG 61.299 60.000 0.00 0.00 0.00 4.01
2637 2940 5.557891 AACAGAAGTCTGAATAGCAATGC 57.442 39.130 15.15 0.00 46.59 3.56
2642 2945 5.411053 AGCAGAAAACAGAAGTCTGAATAGC 59.589 40.000 15.15 10.16 46.59 2.97
2643 2946 7.172190 TGAAGCAGAAAACAGAAGTCTGAATAG 59.828 37.037 15.15 1.64 46.59 1.73
2655 2960 3.318839 TCCCACATTGAAGCAGAAAACAG 59.681 43.478 0.00 0.00 0.00 3.16
2657 2962 4.240096 CATCCCACATTGAAGCAGAAAAC 58.760 43.478 0.00 0.00 0.00 2.43
2660 2965 2.821378 CACATCCCACATTGAAGCAGAA 59.179 45.455 0.00 0.00 0.00 3.02
2662 2970 2.439409 TCACATCCCACATTGAAGCAG 58.561 47.619 0.00 0.00 0.00 4.24
2665 2973 3.021695 AGCATCACATCCCACATTGAAG 58.978 45.455 0.00 0.00 0.00 3.02
2674 2982 3.665745 ACACAAAAAGCATCACATCCC 57.334 42.857 0.00 0.00 0.00 3.85
2675 2983 5.523188 TGAAAACACAAAAAGCATCACATCC 59.477 36.000 0.00 0.00 0.00 3.51
2679 2987 5.108517 TCCTGAAAACACAAAAAGCATCAC 58.891 37.500 0.00 0.00 0.00 3.06
2680 2988 5.105392 ACTCCTGAAAACACAAAAAGCATCA 60.105 36.000 0.00 0.00 0.00 3.07
2681 2989 5.351458 ACTCCTGAAAACACAAAAAGCATC 58.649 37.500 0.00 0.00 0.00 3.91
2682 2990 5.343307 ACTCCTGAAAACACAAAAAGCAT 57.657 34.783 0.00 0.00 0.00 3.79
2684 2992 5.646606 TGTACTCCTGAAAACACAAAAAGC 58.353 37.500 0.00 0.00 0.00 3.51
2685 2993 8.190784 AGATTGTACTCCTGAAAACACAAAAAG 58.809 33.333 0.00 0.00 30.48 2.27
2696 3004 6.068971 AGACTACCCTAGATTGTACTCCTGAA 60.069 42.308 0.00 0.00 0.00 3.02
2698 3006 5.697067 AGACTACCCTAGATTGTACTCCTG 58.303 45.833 0.00 0.00 0.00 3.86
2699 3007 5.998128 AGACTACCCTAGATTGTACTCCT 57.002 43.478 0.00 0.00 0.00 3.69
2700 3008 5.302313 CCAAGACTACCCTAGATTGTACTCC 59.698 48.000 0.00 0.00 0.00 3.85
2701 3009 5.892686 ACCAAGACTACCCTAGATTGTACTC 59.107 44.000 0.00 0.00 0.00 2.59
2702 3010 5.840081 ACCAAGACTACCCTAGATTGTACT 58.160 41.667 0.00 0.00 0.00 2.73
2703 3011 6.541934 AACCAAGACTACCCTAGATTGTAC 57.458 41.667 0.00 0.00 0.00 2.90
2710 3018 7.657023 ACATAACTAACCAAGACTACCCTAG 57.343 40.000 0.00 0.00 0.00 3.02
2711 3019 7.675195 TGAACATAACTAACCAAGACTACCCTA 59.325 37.037 0.00 0.00 0.00 3.53
2713 3021 6.704310 TGAACATAACTAACCAAGACTACCC 58.296 40.000 0.00 0.00 0.00 3.69
2714 3022 6.313164 GCTGAACATAACTAACCAAGACTACC 59.687 42.308 0.00 0.00 0.00 3.18
2716 3024 7.241042 AGCTGAACATAACTAACCAAGACTA 57.759 36.000 0.00 0.00 0.00 2.59
2717 3025 6.115448 AGCTGAACATAACTAACCAAGACT 57.885 37.500 0.00 0.00 0.00 3.24
2721 3029 6.952773 ACAAAGCTGAACATAACTAACCAA 57.047 33.333 0.00 0.00 0.00 3.67
2723 3031 7.900782 TCTACAAAGCTGAACATAACTAACC 57.099 36.000 0.00 0.00 0.00 2.85
2732 3040 6.016276 GGGAAAAAGATCTACAAAGCTGAACA 60.016 38.462 0.00 0.00 0.00 3.18
2736 3044 4.695455 TCGGGAAAAAGATCTACAAAGCTG 59.305 41.667 0.00 0.00 0.00 4.24
2742 3050 3.513912 TGAGCTCGGGAAAAAGATCTACA 59.486 43.478 9.64 0.00 0.00 2.74
2744 3052 3.769844 AGTGAGCTCGGGAAAAAGATCTA 59.230 43.478 9.64 0.00 0.00 1.98
2745 3053 2.569404 AGTGAGCTCGGGAAAAAGATCT 59.431 45.455 9.64 0.00 0.00 2.75
2746 3054 2.979240 AGTGAGCTCGGGAAAAAGATC 58.021 47.619 9.64 0.00 0.00 2.75
2747 3055 3.425162 AAGTGAGCTCGGGAAAAAGAT 57.575 42.857 9.64 0.00 0.00 2.40
2748 3056 2.930826 AAGTGAGCTCGGGAAAAAGA 57.069 45.000 9.64 0.00 0.00 2.52
2749 3057 3.990318 AAAAGTGAGCTCGGGAAAAAG 57.010 42.857 9.64 0.00 0.00 2.27
2750 3058 4.710324 TCTAAAAGTGAGCTCGGGAAAAA 58.290 39.130 9.64 0.00 0.00 1.94
2753 3061 4.062991 GTTTCTAAAAGTGAGCTCGGGAA 58.937 43.478 9.64 2.96 0.00 3.97
2755 3063 3.665190 AGTTTCTAAAAGTGAGCTCGGG 58.335 45.455 9.64 0.00 0.00 5.14
2757 3065 4.212214 AGCAAGTTTCTAAAAGTGAGCTCG 59.788 41.667 9.64 0.00 0.00 5.03
2758 3066 5.008118 ACAGCAAGTTTCTAAAAGTGAGCTC 59.992 40.000 6.82 6.82 0.00 4.09
2774 3082 1.832883 TCACACACCAAACAGCAAGT 58.167 45.000 0.00 0.00 0.00 3.16
2779 3115 5.443185 AAATCAGATCACACACCAAACAG 57.557 39.130 0.00 0.00 0.00 3.16
2790 3126 4.928661 ACACTTGCGTAAATCAGATCAC 57.071 40.909 0.00 0.00 0.00 3.06
2792 3128 5.530519 TCAACACTTGCGTAAATCAGATC 57.469 39.130 0.00 0.00 0.00 2.75
2800 3136 4.902443 TGGAAAATCAACACTTGCGTAA 57.098 36.364 0.00 0.00 0.00 3.18
2802 3138 3.443976 GTTGGAAAATCAACACTTGCGT 58.556 40.909 3.23 0.00 44.51 5.24
2804 3140 3.803778 CAGGTTGGAAAATCAACACTTGC 59.196 43.478 9.47 0.00 46.29 4.01
2805 3141 4.099266 TCCAGGTTGGAAAATCAACACTTG 59.901 41.667 9.47 5.15 45.00 3.16
2820 3179 7.727331 TCTGCAAATTTAAAAATCCAGGTTG 57.273 32.000 0.00 3.33 0.00 3.77
2830 3189 5.067936 TCCCTCGTGTTCTGCAAATTTAAAA 59.932 36.000 0.00 0.00 0.00 1.52
2834 3193 2.582052 TCCCTCGTGTTCTGCAAATTT 58.418 42.857 0.00 0.00 0.00 1.82
2837 3196 1.673920 GTTTCCCTCGTGTTCTGCAAA 59.326 47.619 0.00 0.00 0.00 3.68
2849 3208 1.285950 GGCAAACGCTGTTTCCCTC 59.714 57.895 6.81 0.00 0.00 4.30
2882 3241 3.826729 GGTACCTCTTGGCTTTGTTCAAT 59.173 43.478 4.06 0.00 36.63 2.57
2883 3242 3.117663 AGGTACCTCTTGGCTTTGTTCAA 60.118 43.478 9.21 0.00 36.63 2.69
2885 3244 3.141767 AGGTACCTCTTGGCTTTGTTC 57.858 47.619 9.21 0.00 36.63 3.18
2891 3250 1.203313 TCCTCAAGGTACCTCTTGGCT 60.203 52.381 16.64 0.00 43.05 4.75
2966 3325 0.248289 TCTTAACCTGGGCTGTACGC 59.752 55.000 0.00 1.72 38.13 4.42
2981 3340 1.173043 CATTTGGCTGGCGGTTCTTA 58.827 50.000 0.00 0.00 0.00 2.10
2990 3349 0.967380 GTCCCTGACCATTTGGCTGG 60.967 60.000 0.00 3.72 42.35 4.85
2996 3355 1.002134 CCAGCGTCCCTGACCATTT 60.002 57.895 0.00 0.00 44.64 2.32
3050 3409 2.002586 GCATTGCTCTCTGCGTTCTTA 58.997 47.619 0.16 0.00 46.63 2.10
3059 3418 0.540923 GGACCTCAGCATTGCTCTCT 59.459 55.000 8.54 0.00 36.40 3.10
3079 3438 4.737855 ACAGCAGTCACGGTAAGATAAT 57.262 40.909 0.00 0.00 0.00 1.28
3090 3449 5.008613 TGGAATTGAAAACTACAGCAGTCAC 59.991 40.000 0.00 0.00 36.04 3.67
3098 3457 8.472007 AAGGTAACATGGAATTGAAAACTACA 57.528 30.769 0.00 0.00 41.41 2.74
3106 3465 7.552050 AAATGGAAAGGTAACATGGAATTGA 57.448 32.000 0.00 0.00 41.41 2.57
3117 3476 7.956881 ACTGGGGTTATAAAAATGGAAAGGTAA 59.043 33.333 0.00 0.00 0.00 2.85
3120 3479 6.867519 ACTGGGGTTATAAAAATGGAAAGG 57.132 37.500 0.00 0.00 0.00 3.11
3124 3483 6.775629 GCAGATACTGGGGTTATAAAAATGGA 59.224 38.462 0.00 0.00 31.21 3.41
3125 3484 6.777580 AGCAGATACTGGGGTTATAAAAATGG 59.222 38.462 0.00 0.00 31.21 3.16
3174 3535 4.176271 TGTGTGAAATGTAGAGAGCATCG 58.824 43.478 0.00 0.00 42.67 3.84
3278 3639 5.808042 ACGTTACTACTAAGATGAAGCGA 57.192 39.130 0.00 0.00 0.00 4.93
3298 3660 7.810429 CAATCTTCAAAAATTGCTTCAAACG 57.190 32.000 0.00 0.00 0.00 3.60
3311 3673 4.333649 CGGAGCTATGAGCAATCTTCAAAA 59.666 41.667 0.64 0.00 45.56 2.44
3318 3680 2.810439 AGTCGGAGCTATGAGCAATC 57.190 50.000 0.64 0.00 45.56 2.67
3328 3690 1.893786 CAGCAAGGTAGTCGGAGCT 59.106 57.895 0.00 0.00 0.00 4.09
3334 3696 0.537188 TAGGCTGCAGCAAGGTAGTC 59.463 55.000 37.63 18.99 44.36 2.59
3366 3728 0.538584 AGATCAGCTCGATGTGGCAA 59.461 50.000 0.00 0.00 33.17 4.52
3375 3737 0.735471 TCTCCGACAAGATCAGCTCG 59.265 55.000 0.00 0.00 0.00 5.03
3423 3785 5.459107 GCAGCTGAGATAAATGCAAAGAATG 59.541 40.000 20.43 0.00 36.88 2.67
3431 3793 6.557291 AGAAATAGCAGCTGAGATAAATGC 57.443 37.500 20.43 0.00 37.15 3.56
3440 3802 6.172630 TCACAAACATAGAAATAGCAGCTGA 58.827 36.000 20.43 0.00 0.00 4.26
3441 3803 6.426980 TCACAAACATAGAAATAGCAGCTG 57.573 37.500 10.11 10.11 0.00 4.24
3442 3804 6.459298 GCATCACAAACATAGAAATAGCAGCT 60.459 38.462 0.00 0.00 0.00 4.24
3449 3819 7.458409 ACAAGAGCATCACAAACATAGAAAT 57.542 32.000 0.00 0.00 37.82 2.17
3450 3820 6.882610 ACAAGAGCATCACAAACATAGAAA 57.117 33.333 0.00 0.00 37.82 2.52
3455 3825 4.924305 ACAACAAGAGCATCACAAACAT 57.076 36.364 0.00 0.00 37.82 2.71
3457 3827 6.470235 GCATATACAACAAGAGCATCACAAAC 59.530 38.462 0.00 0.00 37.82 2.93
3494 3864 9.533831 AACAAAGATCAAAACACCTATTAGGAT 57.466 29.630 16.80 1.29 37.67 3.24
3584 3954 3.126831 CAAGCTGCTCTAACGAATAGGG 58.873 50.000 1.00 0.00 34.98 3.53
3602 3972 2.163010 CAGCCAAACCAGATGCTACAAG 59.837 50.000 0.00 0.00 31.69 3.16
3688 4061 6.519382 TGAATCCAGTACATGAGACATCATC 58.481 40.000 0.00 0.00 44.58 2.92
3690 4063 5.937975 TGAATCCAGTACATGAGACATCA 57.062 39.130 0.00 0.00 40.50 3.07
3691 4064 7.171167 CAGATTGAATCCAGTACATGAGACATC 59.829 40.741 0.00 0.00 0.00 3.06
3692 4065 6.990939 CAGATTGAATCCAGTACATGAGACAT 59.009 38.462 0.00 0.00 0.00 3.06
3693 4066 6.343703 CAGATTGAATCCAGTACATGAGACA 58.656 40.000 0.00 0.00 0.00 3.41
3744 4119 7.820648 ACAGTAATAGCAAAGGAAAACTCATG 58.179 34.615 0.00 0.00 0.00 3.07
3754 4129 5.888161 AGGGATCAAACAGTAATAGCAAAGG 59.112 40.000 0.00 0.00 0.00 3.11
3755 4130 7.254455 CGTAGGGATCAAACAGTAATAGCAAAG 60.254 40.741 0.00 0.00 0.00 2.77
3766 4141 4.271049 CAGCATAACGTAGGGATCAAACAG 59.729 45.833 0.00 0.00 0.00 3.16
3767 4142 4.188462 CAGCATAACGTAGGGATCAAACA 58.812 43.478 0.00 0.00 0.00 2.83
3768 4143 4.189231 ACAGCATAACGTAGGGATCAAAC 58.811 43.478 0.00 0.00 0.00 2.93
3769 4144 4.439057 GACAGCATAACGTAGGGATCAAA 58.561 43.478 0.00 0.00 0.00 2.69
3770 4145 3.181469 GGACAGCATAACGTAGGGATCAA 60.181 47.826 0.00 0.00 0.00 2.57
3789 4183 3.454371 AGTTACATACTGATGCGGGAC 57.546 47.619 0.00 0.00 36.43 4.46
3823 4217 7.416326 GGGCGATTCTTTACAAGGAATTTATGT 60.416 37.037 1.43 0.00 33.05 2.29
3836 4230 2.639065 TGGATGTGGGCGATTCTTTAC 58.361 47.619 0.00 0.00 0.00 2.01
3841 4235 1.972872 ATCTTGGATGTGGGCGATTC 58.027 50.000 0.00 0.00 0.00 2.52
3851 4245 2.541588 CGGGCGCTTAAAATCTTGGATG 60.542 50.000 7.64 0.00 0.00 3.51
3853 4247 1.091537 CGGGCGCTTAAAATCTTGGA 58.908 50.000 7.64 0.00 0.00 3.53
3857 4251 4.700700 AGTATAACGGGCGCTTAAAATCT 58.299 39.130 7.64 0.00 0.00 2.40
3866 4260 4.271776 AGTTGAAAATAGTATAACGGGCGC 59.728 41.667 0.00 0.00 0.00 6.53
3867 4261 5.978934 AGTTGAAAATAGTATAACGGGCG 57.021 39.130 0.00 0.00 0.00 6.13
3869 4263 6.685403 CGCAAAGTTGAAAATAGTATAACGGG 59.315 38.462 0.00 0.00 0.00 5.28
3871 4265 8.933955 CATCGCAAAGTTGAAAATAGTATAACG 58.066 33.333 0.00 0.00 0.00 3.18
3872 4266 9.769093 ACATCGCAAAGTTGAAAATAGTATAAC 57.231 29.630 0.00 0.00 0.00 1.89
3873 4267 9.982291 GACATCGCAAAGTTGAAAATAGTATAA 57.018 29.630 0.00 0.00 0.00 0.98
3874 4268 8.609176 GGACATCGCAAAGTTGAAAATAGTATA 58.391 33.333 0.00 0.00 0.00 1.47
3875 4269 7.336931 AGGACATCGCAAAGTTGAAAATAGTAT 59.663 33.333 0.00 0.00 0.00 2.12
3876 4270 6.653320 AGGACATCGCAAAGTTGAAAATAGTA 59.347 34.615 0.00 0.00 0.00 1.82
3877 4271 5.473504 AGGACATCGCAAAGTTGAAAATAGT 59.526 36.000 0.00 0.00 0.00 2.12
3878 4272 5.942872 AGGACATCGCAAAGTTGAAAATAG 58.057 37.500 0.00 0.00 0.00 1.73
3879 4273 5.957842 AGGACATCGCAAAGTTGAAAATA 57.042 34.783 0.00 0.00 0.00 1.40
3880 4274 4.853924 AGGACATCGCAAAGTTGAAAAT 57.146 36.364 0.00 0.00 0.00 1.82
3881 4275 4.097135 TCAAGGACATCGCAAAGTTGAAAA 59.903 37.500 0.00 0.00 0.00 2.29
3882 4276 3.629855 TCAAGGACATCGCAAAGTTGAAA 59.370 39.130 0.00 0.00 0.00 2.69
3883 4277 3.003275 GTCAAGGACATCGCAAAGTTGAA 59.997 43.478 0.00 0.00 32.09 2.69
3884 4278 2.548057 GTCAAGGACATCGCAAAGTTGA 59.452 45.455 0.00 0.00 32.09 3.18
3885 4279 2.662791 CGTCAAGGACATCGCAAAGTTG 60.663 50.000 0.00 0.00 32.09 3.16
3886 4280 1.531149 CGTCAAGGACATCGCAAAGTT 59.469 47.619 0.00 0.00 32.09 2.66
3887 4281 1.148310 CGTCAAGGACATCGCAAAGT 58.852 50.000 0.00 0.00 32.09 2.66
3895 4289 2.671396 GCGTTATGTTCGTCAAGGACAT 59.329 45.455 0.00 0.00 37.70 3.06
3902 4296 1.206132 AGGGATGCGTTATGTTCGTCA 59.794 47.619 0.00 0.00 0.00 4.35
3911 4305 3.961480 CATCTATGGAGGGATGCGTTA 57.039 47.619 0.00 0.00 33.98 3.18
3932 4510 1.153549 CCTGGCAGTCGGAACTAGC 60.154 63.158 14.43 0.00 33.25 3.42
3935 4530 2.925170 AGCCTGGCAGTCGGAACT 60.925 61.111 22.65 0.00 35.60 3.01
3961 4556 3.513768 ATGGTGTGTGCGCTCGTCA 62.514 57.895 9.73 6.00 0.00 4.35
3964 4559 1.638388 ATTGATGGTGTGTGCGCTCG 61.638 55.000 9.73 0.00 0.00 5.03
3978 4573 3.480470 CGTTCTTCAGGGCCATATTGAT 58.520 45.455 6.18 0.00 0.00 2.57
3981 4576 1.133792 CCCGTTCTTCAGGGCCATATT 60.134 52.381 6.18 0.00 41.34 1.28
3991 4586 4.367023 CCGACGCCCCGTTCTTCA 62.367 66.667 0.00 0.00 41.37 3.02
4028 4623 1.944709 GTTGTGACCACGCCTTAGTTT 59.055 47.619 0.00 0.00 0.00 2.66
4030 4625 0.466543 TGTTGTGACCACGCCTTAGT 59.533 50.000 0.00 0.00 0.00 2.24
4031 4626 1.263217 GTTGTTGTGACCACGCCTTAG 59.737 52.381 0.00 0.00 0.00 2.18
4032 4627 1.301423 GTTGTTGTGACCACGCCTTA 58.699 50.000 0.00 0.00 0.00 2.69
4033 4628 0.678366 TGTTGTTGTGACCACGCCTT 60.678 50.000 0.00 0.00 0.00 4.35
4034 4629 1.078072 TGTTGTTGTGACCACGCCT 60.078 52.632 0.00 0.00 0.00 5.52
4085 4701 3.869272 CAATGTCGGCGAGCAGGC 61.869 66.667 11.20 0.00 42.76 4.85
4093 6600 3.499737 CGCCCTCACAATGTCGGC 61.500 66.667 5.77 5.77 36.21 5.54
4103 6612 2.105821 CAAATCCTATTACCCGCCCTCA 59.894 50.000 0.00 0.00 0.00 3.86
4122 6631 0.673333 CACTGCCATGTCGCCTACAA 60.673 55.000 0.00 0.00 42.70 2.41
4137 6692 0.041839 GTTCGCAGCTCACAACACTG 60.042 55.000 0.00 0.00 34.48 3.66
4138 6693 1.490693 CGTTCGCAGCTCACAACACT 61.491 55.000 0.00 0.00 0.00 3.55
4202 6781 1.118356 GCTCGTCCTGATCCCCATCT 61.118 60.000 0.00 0.00 0.00 2.90
4224 6803 2.139323 AATGCACATCATCACAGCCT 57.861 45.000 0.00 0.00 33.40 4.58
4299 6878 6.093219 CACCTCTTAATCAAGTTCCATGACAG 59.907 42.308 0.00 0.00 33.20 3.51
4301 6880 5.163713 GCACCTCTTAATCAAGTTCCATGAC 60.164 44.000 0.00 0.00 33.20 3.06
4303 6882 4.701651 TGCACCTCTTAATCAAGTTCCATG 59.298 41.667 0.00 0.00 33.20 3.66
4304 6883 4.922206 TGCACCTCTTAATCAAGTTCCAT 58.078 39.130 0.00 0.00 33.20 3.41
4306 6885 5.415701 TGATTGCACCTCTTAATCAAGTTCC 59.584 40.000 0.00 0.00 37.74 3.62
4307 6886 6.500684 TGATTGCACCTCTTAATCAAGTTC 57.499 37.500 0.00 0.00 37.74 3.01
4308 6887 6.899393 TTGATTGCACCTCTTAATCAAGTT 57.101 33.333 0.00 0.00 42.57 2.66
4311 6890 4.158394 GGCTTGATTGCACCTCTTAATCAA 59.842 41.667 7.34 7.34 44.18 2.57
4312 6891 3.696051 GGCTTGATTGCACCTCTTAATCA 59.304 43.478 0.00 0.00 38.61 2.57
4313 6892 3.950395 AGGCTTGATTGCACCTCTTAATC 59.050 43.478 0.00 0.00 34.04 1.75
4314 6893 3.950395 GAGGCTTGATTGCACCTCTTAAT 59.050 43.478 10.71 0.00 44.41 1.40
4315 6894 3.347216 GAGGCTTGATTGCACCTCTTAA 58.653 45.455 10.71 0.00 44.41 1.85
4316 6895 2.991250 GAGGCTTGATTGCACCTCTTA 58.009 47.619 10.71 0.00 44.41 2.10
4317 6896 1.831580 GAGGCTTGATTGCACCTCTT 58.168 50.000 10.71 0.00 44.41 2.85
4318 6897 3.566130 GAGGCTTGATTGCACCTCT 57.434 52.632 10.71 0.00 44.41 3.69
4320 6899 2.573462 TCTAAGAGGCTTGATTGCACCT 59.427 45.455 0.00 0.00 34.43 4.00
4321 6900 2.941720 CTCTAAGAGGCTTGATTGCACC 59.058 50.000 0.00 0.00 34.04 5.01
4371 6950 8.689061 TGCTAACAATATGCTCTCATCATTTTT 58.311 29.630 0.00 0.00 34.22 1.94
4373 6952 7.812690 TGCTAACAATATGCTCTCATCATTT 57.187 32.000 0.00 0.00 34.22 2.32
4375 6954 7.812690 TTTGCTAACAATATGCTCTCATCAT 57.187 32.000 0.00 0.00 35.21 2.45
4376 6955 7.201758 CCTTTTGCTAACAATATGCTCTCATCA 60.202 37.037 0.00 0.00 35.21 3.07
4377 6956 7.137426 CCTTTTGCTAACAATATGCTCTCATC 58.863 38.462 0.00 0.00 35.21 2.92
4379 6958 5.945784 ACCTTTTGCTAACAATATGCTCTCA 59.054 36.000 0.00 0.00 35.21 3.27
4380 6959 6.442513 ACCTTTTGCTAACAATATGCTCTC 57.557 37.500 0.00 0.00 35.21 3.20
4416 7001 0.238289 GTGCATGTTGTCTTCCCGTG 59.762 55.000 0.00 0.00 0.00 4.94
4419 7004 1.620822 AAGGTGCATGTTGTCTTCCC 58.379 50.000 0.00 0.00 0.00 3.97
4420 7005 2.288395 CCAAAGGTGCATGTTGTCTTCC 60.288 50.000 0.00 0.00 0.00 3.46
4421 7006 2.863704 GCCAAAGGTGCATGTTGTCTTC 60.864 50.000 0.00 0.00 0.00 2.87
4435 7020 2.811431 TCGACAATGTAGTTGCCAAAGG 59.189 45.455 0.00 0.00 41.69 3.11
4437 7022 4.068599 TCATCGACAATGTAGTTGCCAAA 58.931 39.130 0.00 0.00 41.69 3.28
4478 7065 0.598065 GGCGTCAGAAACATTTGGCT 59.402 50.000 0.00 0.00 0.00 4.75
4504 7091 6.183360 GCCTATTATGGGTTTATCATCATGCC 60.183 42.308 0.00 0.00 0.00 4.40
4538 7125 6.238320 CCAATGACATCTCAAGTTAGCTTAGC 60.238 42.308 0.00 0.00 32.87 3.09
4583 7170 6.295575 GGCTCCTAGTGAAGCATCTATGTTAT 60.296 42.308 10.17 0.00 0.00 1.89
4597 7184 4.317530 TTCTAAGACTGGCTCCTAGTGA 57.682 45.455 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.