Multiple sequence alignment - TraesCS5D01G172000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G172000 chr5D 100.000 3177 0 0 1 3177 268935477 268932301 0.000000e+00 5867.0
1 TraesCS5D01G172000 chr5B 96.067 1678 41 8 553 2208 304655939 304654265 0.000000e+00 2710.0
2 TraesCS5D01G172000 chr5B 91.644 730 54 6 2449 3177 304651103 304651826 0.000000e+00 1003.0
3 TraesCS5D01G172000 chr5B 98.936 94 0 1 1 94 304656092 304656000 1.960000e-37 167.0
4 TraesCS5D01G172000 chr5B 95.385 65 3 0 2278 2342 304654247 304654183 1.560000e-18 104.0
5 TraesCS5D01G172000 chr5B 92.647 68 4 1 2367 2433 304654191 304654124 2.610000e-16 97.1
6 TraesCS5D01G172000 chr5A 90.169 1831 97 35 398 2208 356595167 356593400 0.000000e+00 2307.0
7 TraesCS5D01G172000 chr5A 92.936 722 44 6 2446 3166 356503466 356504181 0.000000e+00 1044.0
8 TraesCS5D01G172000 chr5A 88.153 287 21 7 92 374 663786025 663785748 2.360000e-86 329.0
9 TraesCS5D01G172000 chr5A 87.413 286 24 7 93 374 527626907 527627184 5.110000e-83 318.0
10 TraesCS5D01G172000 chr5A 95.385 65 3 0 2278 2342 356593382 356593318 1.560000e-18 104.0
11 TraesCS5D01G172000 chr2B 82.903 1357 163 43 850 2175 632513592 632512274 0.000000e+00 1157.0
12 TraesCS5D01G172000 chr3D 84.744 1193 135 23 997 2176 319865083 319866241 0.000000e+00 1151.0
13 TraesCS5D01G172000 chr3B 83.868 1215 145 29 997 2182 400289507 400288315 0.000000e+00 1110.0
14 TraesCS5D01G172000 chr3A 83.921 1163 134 27 1040 2182 405958709 405957580 0.000000e+00 1062.0
15 TraesCS5D01G172000 chr3A 88.112 286 22 8 93 374 580636118 580636395 2.360000e-86 329.0
16 TraesCS5D01G172000 chr2A 82.393 1187 147 33 1000 2175 677368551 677367416 0.000000e+00 977.0
17 TraesCS5D01G172000 chr2A 88.795 589 63 1 1587 2175 677038859 677038274 0.000000e+00 719.0
18 TraesCS5D01G172000 chr2A 79.676 679 75 31 850 1488 677069627 677068972 6.300000e-117 431.0
19 TraesCS5D01G172000 chr2A 79.676 679 75 31 850 1488 677101568 677100913 6.300000e-117 431.0
20 TraesCS5D01G172000 chr2A 79.676 679 75 31 850 1488 677157639 677156984 6.300000e-117 431.0
21 TraesCS5D01G172000 chr2A 79.676 679 75 31 850 1488 677172842 677172187 6.300000e-117 431.0
22 TraesCS5D01G172000 chr2A 87.676 284 26 6 93 374 710377093 710377369 3.950000e-84 322.0
23 TraesCS5D01G172000 chrUn 80.547 1352 183 46 851 2175 183931379 183932677 0.000000e+00 966.0
24 TraesCS5D01G172000 chrUn 80.093 643 75 25 850 1462 183904264 183904883 2.260000e-116 429.0
25 TraesCS5D01G172000 chrUn 80.093 643 75 26 850 1462 235135653 235135034 2.260000e-116 429.0
26 TraesCS5D01G172000 chr1A 81.433 684 88 22 2499 3170 460840717 460841373 1.010000e-144 523.0
27 TraesCS5D01G172000 chr1A 87.719 285 23 7 94 374 65829798 65829522 3.950000e-84 322.0
28 TraesCS5D01G172000 chr1D 89.216 306 28 5 95 400 85205160 85204860 8.320000e-101 377.0
29 TraesCS5D01G172000 chr4A 87.805 287 23 7 92 374 214995848 214995570 3.060000e-85 326.0
30 TraesCS5D01G172000 chr4A 87.456 287 23 8 93 374 319838469 319838747 5.110000e-83 318.0
31 TraesCS5D01G172000 chr7A 87.108 287 24 8 93 374 641709443 641709165 2.380000e-81 313.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G172000 chr5D 268932301 268935477 3176 True 5867.000 5867 100.00000 1 3177 1 chr5D.!!$R1 3176
1 TraesCS5D01G172000 chr5B 304651103 304651826 723 False 1003.000 1003 91.64400 2449 3177 1 chr5B.!!$F1 728
2 TraesCS5D01G172000 chr5B 304654124 304656092 1968 True 769.525 2710 95.75875 1 2433 4 chr5B.!!$R1 2432
3 TraesCS5D01G172000 chr5A 356593318 356595167 1849 True 1205.500 2307 92.77700 398 2342 2 chr5A.!!$R2 1944
4 TraesCS5D01G172000 chr5A 356503466 356504181 715 False 1044.000 1044 92.93600 2446 3166 1 chr5A.!!$F1 720
5 TraesCS5D01G172000 chr2B 632512274 632513592 1318 True 1157.000 1157 82.90300 850 2175 1 chr2B.!!$R1 1325
6 TraesCS5D01G172000 chr3D 319865083 319866241 1158 False 1151.000 1151 84.74400 997 2176 1 chr3D.!!$F1 1179
7 TraesCS5D01G172000 chr3B 400288315 400289507 1192 True 1110.000 1110 83.86800 997 2182 1 chr3B.!!$R1 1185
8 TraesCS5D01G172000 chr3A 405957580 405958709 1129 True 1062.000 1062 83.92100 1040 2182 1 chr3A.!!$R1 1142
9 TraesCS5D01G172000 chr2A 677367416 677368551 1135 True 977.000 977 82.39300 1000 2175 1 chr2A.!!$R6 1175
10 TraesCS5D01G172000 chr2A 677038274 677038859 585 True 719.000 719 88.79500 1587 2175 1 chr2A.!!$R1 588
11 TraesCS5D01G172000 chr2A 677068972 677069627 655 True 431.000 431 79.67600 850 1488 1 chr2A.!!$R2 638
12 TraesCS5D01G172000 chr2A 677100913 677101568 655 True 431.000 431 79.67600 850 1488 1 chr2A.!!$R3 638
13 TraesCS5D01G172000 chr2A 677156984 677157639 655 True 431.000 431 79.67600 850 1488 1 chr2A.!!$R4 638
14 TraesCS5D01G172000 chr2A 677172187 677172842 655 True 431.000 431 79.67600 850 1488 1 chr2A.!!$R5 638
15 TraesCS5D01G172000 chrUn 183931379 183932677 1298 False 966.000 966 80.54700 851 2175 1 chrUn.!!$F2 1324
16 TraesCS5D01G172000 chrUn 183904264 183904883 619 False 429.000 429 80.09300 850 1462 1 chrUn.!!$F1 612
17 TraesCS5D01G172000 chrUn 235135034 235135653 619 True 429.000 429 80.09300 850 1462 1 chrUn.!!$R1 612
18 TraesCS5D01G172000 chr1A 460840717 460841373 656 False 523.000 523 81.43300 2499 3170 1 chr1A.!!$F1 671

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
268 269 0.041576 GGCGAAAACCGAACTGACAC 60.042 55.0 0.0 0.0 41.76 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2211 2387 0.241749 CGCCGTGTTGTAGGTCTGTA 59.758 55.0 0.0 0.0 0.0 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 87 4.650754 ACCATCTAGCTAAACAGTACCG 57.349 45.455 0.00 0.00 0.00 4.02
87 88 4.021916 ACCATCTAGCTAAACAGTACCGT 58.978 43.478 0.00 0.00 0.00 4.83
88 89 4.142227 ACCATCTAGCTAAACAGTACCGTG 60.142 45.833 0.00 0.00 0.00 4.94
89 90 4.142227 CCATCTAGCTAAACAGTACCGTGT 60.142 45.833 0.00 0.00 0.00 4.49
90 91 5.066893 CCATCTAGCTAAACAGTACCGTGTA 59.933 44.000 0.00 0.00 0.00 2.90
91 92 5.551760 TCTAGCTAAACAGTACCGTGTAC 57.448 43.478 0.00 6.19 0.00 2.90
92 93 5.248640 TCTAGCTAAACAGTACCGTGTACT 58.751 41.667 9.95 9.95 0.00 2.73
93 94 4.861102 AGCTAAACAGTACCGTGTACTT 57.139 40.909 12.32 3.99 0.00 2.24
94 95 5.205759 AGCTAAACAGTACCGTGTACTTT 57.794 39.130 12.32 9.07 0.00 2.66
95 96 5.604565 AGCTAAACAGTACCGTGTACTTTT 58.395 37.500 12.32 15.46 0.00 2.27
96 97 6.051074 AGCTAAACAGTACCGTGTACTTTTT 58.949 36.000 21.29 21.29 33.59 1.94
114 115 0.880441 TTTTTAAGCCGGGCGTAACC 59.120 50.000 23.97 0.00 32.90 2.85
124 125 3.276281 GGCGTAACCCCTTTCCATT 57.724 52.632 0.00 0.00 0.00 3.16
125 126 2.423446 GGCGTAACCCCTTTCCATTA 57.577 50.000 0.00 0.00 0.00 1.90
126 127 2.019249 GGCGTAACCCCTTTCCATTAC 58.981 52.381 0.00 0.00 0.00 1.89
127 128 2.356432 GGCGTAACCCCTTTCCATTACT 60.356 50.000 0.00 0.00 0.00 2.24
128 129 3.349927 GCGTAACCCCTTTCCATTACTT 58.650 45.455 0.00 0.00 0.00 2.24
129 130 3.128068 GCGTAACCCCTTTCCATTACTTG 59.872 47.826 0.00 0.00 0.00 3.16
130 131 3.128068 CGTAACCCCTTTCCATTACTTGC 59.872 47.826 0.00 0.00 0.00 4.01
131 132 2.990740 ACCCCTTTCCATTACTTGCA 57.009 45.000 0.00 0.00 0.00 4.08
132 133 3.473113 ACCCCTTTCCATTACTTGCAT 57.527 42.857 0.00 0.00 0.00 3.96
133 134 4.601406 ACCCCTTTCCATTACTTGCATA 57.399 40.909 0.00 0.00 0.00 3.14
134 135 4.941713 ACCCCTTTCCATTACTTGCATAA 58.058 39.130 0.00 0.00 0.00 1.90
135 136 4.709886 ACCCCTTTCCATTACTTGCATAAC 59.290 41.667 0.00 0.00 0.00 1.89
136 137 4.202010 CCCCTTTCCATTACTTGCATAACG 60.202 45.833 0.00 0.00 0.00 3.18
137 138 4.202010 CCCTTTCCATTACTTGCATAACGG 60.202 45.833 0.00 0.00 0.00 4.44
138 139 4.638421 CCTTTCCATTACTTGCATAACGGA 59.362 41.667 0.00 0.00 0.00 4.69
139 140 5.124776 CCTTTCCATTACTTGCATAACGGAA 59.875 40.000 3.99 3.99 35.23 4.30
140 141 6.349777 CCTTTCCATTACTTGCATAACGGAAA 60.350 38.462 15.73 15.73 41.63 3.13
141 142 6.767524 TTCCATTACTTGCATAACGGAAAT 57.232 33.333 5.38 0.00 34.37 2.17
142 143 7.867305 TTCCATTACTTGCATAACGGAAATA 57.133 32.000 5.38 0.00 34.37 1.40
143 144 7.254227 TCCATTACTTGCATAACGGAAATAC 57.746 36.000 0.00 0.00 0.00 1.89
144 145 6.824196 TCCATTACTTGCATAACGGAAATACA 59.176 34.615 0.00 0.00 0.00 2.29
145 146 7.500892 TCCATTACTTGCATAACGGAAATACAT 59.499 33.333 0.00 0.00 0.00 2.29
146 147 8.779303 CCATTACTTGCATAACGGAAATACATA 58.221 33.333 0.00 0.00 0.00 2.29
151 152 9.204570 ACTTGCATAACGGAAATACATATAGTC 57.795 33.333 0.00 0.00 0.00 2.59
152 153 9.424319 CTTGCATAACGGAAATACATATAGTCT 57.576 33.333 0.00 0.00 0.00 3.24
153 154 9.772973 TTGCATAACGGAAATACATATAGTCTT 57.227 29.630 0.00 0.00 0.00 3.01
172 173 7.569639 AGTCTTAAGAGTTCAAAAGGAAACC 57.430 36.000 5.12 0.00 37.23 3.27
173 174 7.347252 AGTCTTAAGAGTTCAAAAGGAAACCT 58.653 34.615 5.12 0.00 37.23 3.50
174 175 8.491958 AGTCTTAAGAGTTCAAAAGGAAACCTA 58.508 33.333 5.12 0.00 37.23 3.08
175 176 8.775527 GTCTTAAGAGTTCAAAAGGAAACCTAG 58.224 37.037 5.12 0.00 37.23 3.02
176 177 8.711170 TCTTAAGAGTTCAAAAGGAAACCTAGA 58.289 33.333 0.00 0.00 37.23 2.43
177 178 9.338622 CTTAAGAGTTCAAAAGGAAACCTAGAA 57.661 33.333 0.00 0.00 37.23 2.10
178 179 9.689501 TTAAGAGTTCAAAAGGAAACCTAGAAA 57.310 29.630 0.00 0.00 37.23 2.52
179 180 7.809546 AGAGTTCAAAAGGAAACCTAGAAAG 57.190 36.000 0.00 0.00 37.23 2.62
191 192 2.010497 CCTAGAAAGGGAAAAGCGAGC 58.990 52.381 0.00 0.00 39.48 5.03
192 193 2.355209 CCTAGAAAGGGAAAAGCGAGCT 60.355 50.000 0.00 0.00 39.48 4.09
193 194 1.814793 AGAAAGGGAAAAGCGAGCTC 58.185 50.000 2.73 2.73 0.00 4.09
194 195 1.072331 AGAAAGGGAAAAGCGAGCTCA 59.928 47.619 15.40 0.00 0.00 4.26
195 196 1.880027 GAAAGGGAAAAGCGAGCTCAA 59.120 47.619 15.40 0.00 0.00 3.02
196 197 1.981256 AAGGGAAAAGCGAGCTCAAA 58.019 45.000 15.40 0.00 0.00 2.69
197 198 1.528129 AGGGAAAAGCGAGCTCAAAG 58.472 50.000 15.40 0.00 0.00 2.77
198 199 0.109551 GGGAAAAGCGAGCTCAAAGC 60.110 55.000 15.40 9.32 42.84 3.51
199 200 0.593128 GGAAAAGCGAGCTCAAAGCA 59.407 50.000 15.40 0.00 45.56 3.91
200 201 1.664302 GGAAAAGCGAGCTCAAAGCAC 60.664 52.381 15.40 0.58 45.56 4.40
201 202 0.312102 AAAAGCGAGCTCAAAGCACC 59.688 50.000 15.40 0.00 45.56 5.01
202 203 1.845809 AAAGCGAGCTCAAAGCACCG 61.846 55.000 15.40 5.68 45.56 4.94
204 205 2.740055 CGAGCTCAAAGCACCGCT 60.740 61.111 15.40 0.00 45.56 5.52
205 206 2.866028 GAGCTCAAAGCACCGCTG 59.134 61.111 9.40 0.00 45.56 5.18
206 207 2.670934 AGCTCAAAGCACCGCTGG 60.671 61.111 1.29 0.00 45.56 4.85
207 208 3.741476 GCTCAAAGCACCGCTGGG 61.741 66.667 0.00 0.00 41.89 4.45
208 209 2.032528 CTCAAAGCACCGCTGGGA 59.967 61.111 0.00 0.00 39.62 4.37
209 210 1.600636 CTCAAAGCACCGCTGGGAA 60.601 57.895 0.00 0.00 39.62 3.97
210 211 1.152860 TCAAAGCACCGCTGGGAAA 60.153 52.632 0.00 0.00 39.62 3.13
211 212 1.007387 CAAAGCACCGCTGGGAAAC 60.007 57.895 0.00 0.00 39.62 2.78
225 226 1.620822 GGAAACCCACAATGAGCACT 58.379 50.000 0.00 0.00 0.00 4.40
226 227 1.541588 GGAAACCCACAATGAGCACTC 59.458 52.381 0.00 0.00 0.00 3.51
227 228 1.197721 GAAACCCACAATGAGCACTCG 59.802 52.381 0.00 0.00 0.00 4.18
228 229 1.237285 AACCCACAATGAGCACTCGC 61.237 55.000 0.00 0.00 38.99 5.03
229 230 2.401766 CCCACAATGAGCACTCGCC 61.402 63.158 0.00 0.00 39.83 5.54
230 231 1.672030 CCACAATGAGCACTCGCCA 60.672 57.895 0.00 0.00 39.83 5.69
231 232 1.028330 CCACAATGAGCACTCGCCAT 61.028 55.000 0.00 0.00 39.83 4.40
232 233 0.376152 CACAATGAGCACTCGCCATC 59.624 55.000 0.00 0.00 39.83 3.51
233 234 1.086067 ACAATGAGCACTCGCCATCG 61.086 55.000 0.00 0.00 39.83 3.84
234 235 0.807275 CAATGAGCACTCGCCATCGA 60.807 55.000 0.00 0.00 43.28 3.59
242 243 3.451894 TCGCCATCGAGCAGCTCA 61.452 61.111 22.49 9.85 40.21 4.26
243 244 3.260483 CGCCATCGAGCAGCTCAC 61.260 66.667 22.49 4.95 38.10 3.51
244 245 2.894387 GCCATCGAGCAGCTCACC 60.894 66.667 22.49 1.49 0.00 4.02
245 246 2.580815 CCATCGAGCAGCTCACCA 59.419 61.111 22.49 5.71 0.00 4.17
246 247 1.145598 CCATCGAGCAGCTCACCAT 59.854 57.895 22.49 7.86 0.00 3.55
247 248 1.158484 CCATCGAGCAGCTCACCATG 61.158 60.000 22.49 18.14 0.00 3.66
248 249 1.145598 ATCGAGCAGCTCACCATGG 59.854 57.895 22.49 11.19 0.00 3.66
249 250 2.321263 ATCGAGCAGCTCACCATGGG 62.321 60.000 22.49 5.22 0.00 4.00
250 251 2.124403 GAGCAGCTCACCATGGGG 60.124 66.667 18.17 13.53 41.29 4.96
251 252 4.437587 AGCAGCTCACCATGGGGC 62.438 66.667 18.09 16.65 37.90 5.80
253 254 4.100084 CAGCTCACCATGGGGCGA 62.100 66.667 18.09 8.62 37.90 5.54
254 255 3.329889 AGCTCACCATGGGGCGAA 61.330 61.111 18.09 0.00 37.90 4.70
255 256 2.361104 GCTCACCATGGGGCGAAA 60.361 61.111 18.09 0.00 37.90 3.46
256 257 1.976474 GCTCACCATGGGGCGAAAA 60.976 57.895 18.09 0.00 37.90 2.29
257 258 1.883021 CTCACCATGGGGCGAAAAC 59.117 57.895 18.09 0.00 37.90 2.43
258 259 1.595093 CTCACCATGGGGCGAAAACC 61.595 60.000 18.09 0.00 37.90 3.27
259 260 2.675075 ACCATGGGGCGAAAACCG 60.675 61.111 18.09 0.00 37.90 4.44
260 261 2.360600 CCATGGGGCGAAAACCGA 60.361 61.111 2.85 0.00 41.76 4.69
261 262 1.974343 CCATGGGGCGAAAACCGAA 60.974 57.895 2.85 0.00 41.76 4.30
262 263 1.211709 CATGGGGCGAAAACCGAAC 59.788 57.895 0.00 0.00 41.76 3.95
263 264 1.074248 ATGGGGCGAAAACCGAACT 59.926 52.632 0.00 0.00 41.76 3.01
264 265 1.241315 ATGGGGCGAAAACCGAACTG 61.241 55.000 0.00 0.00 41.76 3.16
265 266 1.598685 GGGGCGAAAACCGAACTGA 60.599 57.895 0.00 0.00 41.76 3.41
266 267 1.572941 GGGCGAAAACCGAACTGAC 59.427 57.895 0.00 0.00 41.76 3.51
267 268 1.161563 GGGCGAAAACCGAACTGACA 61.162 55.000 0.00 0.00 41.76 3.58
268 269 0.041576 GGCGAAAACCGAACTGACAC 60.042 55.000 0.00 0.00 41.76 3.67
269 270 0.041576 GCGAAAACCGAACTGACACC 60.042 55.000 0.00 0.00 41.76 4.16
270 271 0.584876 CGAAAACCGAACTGACACCC 59.415 55.000 0.00 0.00 41.76 4.61
271 272 1.808891 CGAAAACCGAACTGACACCCT 60.809 52.381 0.00 0.00 41.76 4.34
272 273 2.546373 CGAAAACCGAACTGACACCCTA 60.546 50.000 0.00 0.00 41.76 3.53
273 274 3.469739 GAAAACCGAACTGACACCCTAA 58.530 45.455 0.00 0.00 0.00 2.69
274 275 3.564053 AAACCGAACTGACACCCTAAA 57.436 42.857 0.00 0.00 0.00 1.85
275 276 3.564053 AACCGAACTGACACCCTAAAA 57.436 42.857 0.00 0.00 0.00 1.52
276 277 2.842457 ACCGAACTGACACCCTAAAAC 58.158 47.619 0.00 0.00 0.00 2.43
277 278 2.148768 CCGAACTGACACCCTAAAACC 58.851 52.381 0.00 0.00 0.00 3.27
278 279 2.224450 CCGAACTGACACCCTAAAACCT 60.224 50.000 0.00 0.00 0.00 3.50
279 280 2.806244 CGAACTGACACCCTAAAACCTG 59.194 50.000 0.00 0.00 0.00 4.00
280 281 2.271944 ACTGACACCCTAAAACCTGC 57.728 50.000 0.00 0.00 0.00 4.85
281 282 1.493022 ACTGACACCCTAAAACCTGCA 59.507 47.619 0.00 0.00 0.00 4.41
282 283 2.154462 CTGACACCCTAAAACCTGCAG 58.846 52.381 6.78 6.78 0.00 4.41
283 284 1.771854 TGACACCCTAAAACCTGCAGA 59.228 47.619 17.39 0.00 0.00 4.26
284 285 2.152016 GACACCCTAAAACCTGCAGAC 58.848 52.381 17.39 0.00 0.00 3.51
285 286 1.774856 ACACCCTAAAACCTGCAGACT 59.225 47.619 17.39 0.00 0.00 3.24
286 287 2.976882 ACACCCTAAAACCTGCAGACTA 59.023 45.455 17.39 0.00 0.00 2.59
287 288 3.244457 ACACCCTAAAACCTGCAGACTAC 60.244 47.826 17.39 0.00 0.00 2.73
288 289 2.305052 ACCCTAAAACCTGCAGACTACC 59.695 50.000 17.39 0.00 0.00 3.18
289 290 2.572104 CCCTAAAACCTGCAGACTACCT 59.428 50.000 17.39 0.00 0.00 3.08
290 291 3.369576 CCCTAAAACCTGCAGACTACCTC 60.370 52.174 17.39 0.00 0.00 3.85
291 292 3.515901 CCTAAAACCTGCAGACTACCTCT 59.484 47.826 17.39 0.00 0.00 3.69
292 293 4.710375 CCTAAAACCTGCAGACTACCTCTA 59.290 45.833 17.39 0.00 0.00 2.43
293 294 5.187186 CCTAAAACCTGCAGACTACCTCTAA 59.813 44.000 17.39 0.00 0.00 2.10
294 295 5.763876 AAAACCTGCAGACTACCTCTAAT 57.236 39.130 17.39 0.00 0.00 1.73
295 296 6.869206 AAAACCTGCAGACTACCTCTAATA 57.131 37.500 17.39 0.00 0.00 0.98
296 297 6.869206 AAACCTGCAGACTACCTCTAATAA 57.131 37.500 17.39 0.00 0.00 1.40
297 298 6.472686 AACCTGCAGACTACCTCTAATAAG 57.527 41.667 17.39 0.00 0.00 1.73
298 299 5.767670 ACCTGCAGACTACCTCTAATAAGA 58.232 41.667 17.39 0.00 0.00 2.10
299 300 5.595133 ACCTGCAGACTACCTCTAATAAGAC 59.405 44.000 17.39 0.00 0.00 3.01
300 301 5.010213 CCTGCAGACTACCTCTAATAAGACC 59.990 48.000 17.39 0.00 0.00 3.85
301 302 5.516044 TGCAGACTACCTCTAATAAGACCA 58.484 41.667 0.00 0.00 0.00 4.02
302 303 5.594725 TGCAGACTACCTCTAATAAGACCAG 59.405 44.000 0.00 0.00 0.00 4.00
303 304 5.828859 GCAGACTACCTCTAATAAGACCAGA 59.171 44.000 0.00 0.00 0.00 3.86
304 305 6.321690 GCAGACTACCTCTAATAAGACCAGAA 59.678 42.308 0.00 0.00 0.00 3.02
305 306 7.469456 GCAGACTACCTCTAATAAGACCAGAAG 60.469 44.444 0.00 0.00 0.00 2.85
306 307 7.776030 CAGACTACCTCTAATAAGACCAGAAGA 59.224 40.741 0.00 0.00 0.00 2.87
307 308 7.996644 AGACTACCTCTAATAAGACCAGAAGAG 59.003 40.741 0.00 0.00 0.00 2.85
308 309 7.645002 ACTACCTCTAATAAGACCAGAAGAGT 58.355 38.462 0.00 0.00 30.74 3.24
309 310 8.117312 ACTACCTCTAATAAGACCAGAAGAGTT 58.883 37.037 0.00 0.00 30.74 3.01
310 311 7.412853 ACCTCTAATAAGACCAGAAGAGTTC 57.587 40.000 0.00 0.00 30.74 3.01
311 312 6.954684 ACCTCTAATAAGACCAGAAGAGTTCA 59.045 38.462 0.00 0.00 30.74 3.18
312 313 7.455008 ACCTCTAATAAGACCAGAAGAGTTCAA 59.545 37.037 0.00 0.00 30.74 2.69
313 314 8.314751 CCTCTAATAAGACCAGAAGAGTTCAAA 58.685 37.037 0.00 0.00 30.74 2.69
314 315 9.145865 CTCTAATAAGACCAGAAGAGTTCAAAC 57.854 37.037 0.00 0.00 0.00 2.93
315 316 8.647796 TCTAATAAGACCAGAAGAGTTCAAACA 58.352 33.333 0.00 0.00 0.00 2.83
316 317 9.273016 CTAATAAGACCAGAAGAGTTCAAACAA 57.727 33.333 0.00 0.00 0.00 2.83
317 318 7.736447 ATAAGACCAGAAGAGTTCAAACAAG 57.264 36.000 0.00 0.00 0.00 3.16
318 319 5.104259 AGACCAGAAGAGTTCAAACAAGT 57.896 39.130 0.00 0.00 0.00 3.16
319 320 5.501156 AGACCAGAAGAGTTCAAACAAGTT 58.499 37.500 0.00 0.00 0.00 2.66
320 321 5.946377 AGACCAGAAGAGTTCAAACAAGTTT 59.054 36.000 0.00 0.00 0.00 2.66
321 322 7.110155 AGACCAGAAGAGTTCAAACAAGTTTA 58.890 34.615 0.00 0.00 0.00 2.01
322 323 7.775561 AGACCAGAAGAGTTCAAACAAGTTTAT 59.224 33.333 0.00 0.00 0.00 1.40
323 324 8.974060 ACCAGAAGAGTTCAAACAAGTTTATA 57.026 30.769 0.00 0.00 0.00 0.98
324 325 9.403583 ACCAGAAGAGTTCAAACAAGTTTATAA 57.596 29.630 0.00 0.00 0.00 0.98
325 326 9.884465 CCAGAAGAGTTCAAACAAGTTTATAAG 57.116 33.333 0.00 0.00 0.00 1.73
326 327 9.884465 CAGAAGAGTTCAAACAAGTTTATAAGG 57.116 33.333 0.00 0.00 0.00 2.69
327 328 8.568794 AGAAGAGTTCAAACAAGTTTATAAGGC 58.431 33.333 0.00 0.00 0.00 4.35
328 329 7.215719 AGAGTTCAAACAAGTTTATAAGGCC 57.784 36.000 0.00 0.00 0.00 5.19
329 330 6.775629 AGAGTTCAAACAAGTTTATAAGGCCA 59.224 34.615 5.01 0.00 0.00 5.36
330 331 6.745116 AGTTCAAACAAGTTTATAAGGCCAC 58.255 36.000 5.01 0.00 0.00 5.01
331 332 6.549736 AGTTCAAACAAGTTTATAAGGCCACT 59.450 34.615 5.01 0.00 0.00 4.00
332 333 6.569179 TCAAACAAGTTTATAAGGCCACTC 57.431 37.500 5.01 0.00 0.00 3.51
333 334 5.475564 TCAAACAAGTTTATAAGGCCACTCC 59.524 40.000 5.01 0.00 0.00 3.85
334 335 4.650972 ACAAGTTTATAAGGCCACTCCA 57.349 40.909 5.01 0.00 37.29 3.86
335 336 4.589908 ACAAGTTTATAAGGCCACTCCAG 58.410 43.478 5.01 0.00 37.29 3.86
336 337 4.288626 ACAAGTTTATAAGGCCACTCCAGA 59.711 41.667 5.01 0.00 37.29 3.86
337 338 4.489306 AGTTTATAAGGCCACTCCAGAC 57.511 45.455 5.01 0.00 37.29 3.51
338 339 3.844211 AGTTTATAAGGCCACTCCAGACA 59.156 43.478 5.01 0.00 37.29 3.41
339 340 3.906720 TTATAAGGCCACTCCAGACAC 57.093 47.619 5.01 0.00 37.29 3.67
340 341 1.656587 ATAAGGCCACTCCAGACACA 58.343 50.000 5.01 0.00 37.29 3.72
341 342 1.429930 TAAGGCCACTCCAGACACAA 58.570 50.000 5.01 0.00 37.29 3.33
342 343 0.550914 AAGGCCACTCCAGACACAAA 59.449 50.000 5.01 0.00 37.29 2.83
343 344 0.550914 AGGCCACTCCAGACACAAAA 59.449 50.000 5.01 0.00 37.29 2.44
344 345 0.668535 GGCCACTCCAGACACAAAAC 59.331 55.000 0.00 0.00 34.01 2.43
345 346 1.388547 GCCACTCCAGACACAAAACA 58.611 50.000 0.00 0.00 0.00 2.83
346 347 1.956477 GCCACTCCAGACACAAAACAT 59.044 47.619 0.00 0.00 0.00 2.71
347 348 2.287788 GCCACTCCAGACACAAAACATG 60.288 50.000 0.00 0.00 0.00 3.21
348 349 2.287788 CCACTCCAGACACAAAACATGC 60.288 50.000 0.00 0.00 0.00 4.06
349 350 1.603802 ACTCCAGACACAAAACATGCG 59.396 47.619 0.00 0.00 0.00 4.73
350 351 0.310543 TCCAGACACAAAACATGCGC 59.689 50.000 0.00 0.00 0.00 6.09
351 352 0.664166 CCAGACACAAAACATGCGCC 60.664 55.000 4.18 0.00 0.00 6.53
352 353 0.664166 CAGACACAAAACATGCGCCC 60.664 55.000 4.18 0.00 0.00 6.13
353 354 1.106351 AGACACAAAACATGCGCCCA 61.106 50.000 4.18 0.00 0.00 5.36
354 355 0.939106 GACACAAAACATGCGCCCAC 60.939 55.000 4.18 0.00 0.00 4.61
355 356 2.015627 CACAAAACATGCGCCCACG 61.016 57.895 4.18 0.00 44.07 4.94
366 367 3.294493 GCCCACGCAGGAGCAAAA 61.294 61.111 0.00 0.00 42.27 2.44
367 368 2.956987 CCCACGCAGGAGCAAAAG 59.043 61.111 0.00 0.00 42.27 2.27
368 369 2.629656 CCCACGCAGGAGCAAAAGG 61.630 63.158 0.00 0.00 42.27 3.11
369 370 1.600636 CCACGCAGGAGCAAAAGGA 60.601 57.895 0.00 0.00 42.27 3.36
370 371 1.576421 CACGCAGGAGCAAAAGGAC 59.424 57.895 0.00 0.00 42.27 3.85
371 372 0.886490 CACGCAGGAGCAAAAGGACT 60.886 55.000 0.00 0.00 42.27 3.85
372 373 0.685097 ACGCAGGAGCAAAAGGACTA 59.315 50.000 0.00 0.00 42.27 2.59
373 374 1.279271 ACGCAGGAGCAAAAGGACTAT 59.721 47.619 0.00 0.00 42.27 2.12
374 375 1.936547 CGCAGGAGCAAAAGGACTATC 59.063 52.381 0.00 0.00 42.27 2.08
375 376 2.293170 GCAGGAGCAAAAGGACTATCC 58.707 52.381 0.00 0.00 41.58 2.59
376 377 2.924421 CAGGAGCAAAAGGACTATCCC 58.076 52.381 0.00 0.00 37.19 3.85
377 378 2.239654 CAGGAGCAAAAGGACTATCCCA 59.760 50.000 0.00 0.00 37.19 4.37
378 379 2.507471 AGGAGCAAAAGGACTATCCCAG 59.493 50.000 0.00 0.00 37.19 4.45
379 380 2.505819 GGAGCAAAAGGACTATCCCAGA 59.494 50.000 0.00 0.00 37.19 3.86
380 381 3.536570 GAGCAAAAGGACTATCCCAGAC 58.463 50.000 0.00 0.00 37.19 3.51
381 382 2.912956 AGCAAAAGGACTATCCCAGACA 59.087 45.455 0.00 0.00 37.19 3.41
382 383 3.525199 AGCAAAAGGACTATCCCAGACAT 59.475 43.478 0.00 0.00 37.19 3.06
383 384 4.721776 AGCAAAAGGACTATCCCAGACATA 59.278 41.667 0.00 0.00 37.19 2.29
384 385 5.059833 GCAAAAGGACTATCCCAGACATAG 58.940 45.833 0.00 0.00 37.19 2.23
385 386 5.163301 GCAAAAGGACTATCCCAGACATAGA 60.163 44.000 0.00 0.00 37.19 1.98
386 387 6.284459 CAAAAGGACTATCCCAGACATAGAC 58.716 44.000 0.00 0.00 37.19 2.59
387 388 4.816048 AGGACTATCCCAGACATAGACA 57.184 45.455 0.00 0.00 37.19 3.41
388 389 5.346782 AGGACTATCCCAGACATAGACAT 57.653 43.478 0.00 0.00 37.19 3.06
389 390 5.083122 AGGACTATCCCAGACATAGACATG 58.917 45.833 0.00 0.00 37.19 3.21
390 391 4.322349 GGACTATCCCAGACATAGACATGC 60.322 50.000 0.00 0.00 35.39 4.06
391 392 2.827800 ATCCCAGACATAGACATGCG 57.172 50.000 0.00 0.00 35.39 4.73
392 393 0.104855 TCCCAGACATAGACATGCGC 59.895 55.000 0.00 0.00 35.39 6.09
393 394 0.882042 CCCAGACATAGACATGCGCC 60.882 60.000 4.18 0.00 35.39 6.53
394 395 0.882042 CCAGACATAGACATGCGCCC 60.882 60.000 4.18 0.00 35.39 6.13
395 396 0.179076 CAGACATAGACATGCGCCCA 60.179 55.000 4.18 0.00 35.39 5.36
396 397 0.179073 AGACATAGACATGCGCCCAC 60.179 55.000 4.18 0.00 35.39 4.61
418 419 4.552355 CACAGTACCGTGTACTTCATTCA 58.448 43.478 12.32 0.00 32.00 2.57
522 524 1.852280 GGACAAACAAGCAAGCGAAAC 59.148 47.619 0.00 0.00 0.00 2.78
524 526 2.529151 ACAAACAAGCAAGCGAAACTG 58.471 42.857 0.00 0.00 0.00 3.16
525 527 1.256117 CAAACAAGCAAGCGAAACTGC 59.744 47.619 0.00 0.00 0.00 4.40
547 549 1.151668 GCCGATCCCATTTCGATCAG 58.848 55.000 0.00 0.00 38.88 2.90
650 668 6.529220 TCTTGGAAGAAGAAGAAGAAGAAGG 58.471 40.000 0.00 0.00 30.73 3.46
651 669 4.646572 TGGAAGAAGAAGAAGAAGAAGGC 58.353 43.478 0.00 0.00 0.00 4.35
745 763 4.498682 GCTATCAATACGTTGGACTACGGT 60.499 45.833 10.65 0.00 45.44 4.83
764 782 0.874390 TGCTTGAACGCACTTCATCC 59.126 50.000 0.00 0.00 38.74 3.51
821 842 3.432749 CCATCTACAGTAATGGTGCTGCT 60.433 47.826 0.00 0.00 40.88 4.24
822 843 3.251479 TCTACAGTAATGGTGCTGCTG 57.749 47.619 0.00 0.00 40.88 4.41
1287 1352 2.045634 TCCGACCTCACCGACGAT 60.046 61.111 0.00 0.00 0.00 3.73
1711 1887 4.868116 AACACCTGCAACGGCGGT 62.868 61.111 13.24 0.00 45.29 5.68
2209 2385 2.681706 CCATCGAGCATGGTCTATCAC 58.318 52.381 21.73 0.00 46.72 3.06
2211 2387 2.073252 TCGAGCATGGTCTATCACCT 57.927 50.000 21.73 0.00 46.98 4.00
2215 2391 3.304996 CGAGCATGGTCTATCACCTACAG 60.305 52.174 21.73 0.00 46.98 2.74
2216 2392 3.891977 GAGCATGGTCTATCACCTACAGA 59.108 47.826 17.59 0.00 46.98 3.41
2217 2393 3.639094 AGCATGGTCTATCACCTACAGAC 59.361 47.826 0.00 0.00 46.98 3.51
2225 2401 5.651139 GTCTATCACCTACAGACCTACAACA 59.349 44.000 0.00 0.00 33.99 3.33
2226 2402 4.803098 ATCACCTACAGACCTACAACAC 57.197 45.455 0.00 0.00 0.00 3.32
2227 2403 2.555325 TCACCTACAGACCTACAACACG 59.445 50.000 0.00 0.00 0.00 4.49
2228 2404 1.891150 ACCTACAGACCTACAACACGG 59.109 52.381 0.00 0.00 0.00 4.94
2229 2405 1.403780 CCTACAGACCTACAACACGGC 60.404 57.143 0.00 0.00 0.00 5.68
2230 2406 0.241749 TACAGACCTACAACACGGCG 59.758 55.000 4.80 4.80 0.00 6.46
2231 2407 2.048503 AGACCTACAACACGGCGC 60.049 61.111 6.90 0.00 0.00 6.53
2232 2408 2.356553 GACCTACAACACGGCGCA 60.357 61.111 10.83 0.00 0.00 6.09
2233 2409 2.663852 ACCTACAACACGGCGCAC 60.664 61.111 10.83 0.00 0.00 5.34
2234 2410 3.419759 CCTACAACACGGCGCACC 61.420 66.667 10.83 0.00 0.00 5.01
2235 2411 2.357034 CTACAACACGGCGCACCT 60.357 61.111 10.83 0.00 0.00 4.00
2236 2412 1.080366 CTACAACACGGCGCACCTA 60.080 57.895 10.83 0.00 0.00 3.08
2237 2413 1.349259 CTACAACACGGCGCACCTAC 61.349 60.000 10.83 0.00 0.00 3.18
2238 2414 2.085042 TACAACACGGCGCACCTACA 62.085 55.000 10.83 0.00 0.00 2.74
2239 2415 2.357034 AACACGGCGCACCTACAG 60.357 61.111 10.83 0.00 0.00 2.74
2240 2416 3.159858 AACACGGCGCACCTACAGT 62.160 57.895 10.83 0.00 0.00 3.55
2241 2417 1.808531 AACACGGCGCACCTACAGTA 61.809 55.000 10.83 0.00 0.00 2.74
2242 2418 1.804326 CACGGCGCACCTACAGTAC 60.804 63.158 10.83 0.00 0.00 2.73
2243 2419 2.270257 ACGGCGCACCTACAGTACA 61.270 57.895 10.83 0.00 0.00 2.90
2244 2420 1.141019 CGGCGCACCTACAGTACAT 59.859 57.895 10.83 0.00 0.00 2.29
2245 2421 0.382873 CGGCGCACCTACAGTACATA 59.617 55.000 10.83 0.00 0.00 2.29
2246 2422 1.000607 CGGCGCACCTACAGTACATAT 60.001 52.381 10.83 0.00 0.00 1.78
2247 2423 2.404215 GGCGCACCTACAGTACATATG 58.596 52.381 10.83 0.00 0.00 1.78
2248 2424 2.404215 GCGCACCTACAGTACATATGG 58.596 52.381 0.30 0.00 0.00 2.74
2249 2425 2.866460 GCGCACCTACAGTACATATGGG 60.866 54.545 0.30 0.00 0.00 4.00
2250 2426 2.364324 CGCACCTACAGTACATATGGGT 59.636 50.000 7.80 0.00 0.00 4.51
2251 2427 3.181469 CGCACCTACAGTACATATGGGTT 60.181 47.826 7.80 0.00 0.00 4.11
2252 2428 4.682320 CGCACCTACAGTACATATGGGTTT 60.682 45.833 7.80 0.00 0.00 3.27
2253 2429 5.190677 GCACCTACAGTACATATGGGTTTT 58.809 41.667 7.80 0.00 0.00 2.43
2254 2430 5.296035 GCACCTACAGTACATATGGGTTTTC 59.704 44.000 7.80 0.00 0.00 2.29
2255 2431 6.650120 CACCTACAGTACATATGGGTTTTCT 58.350 40.000 7.80 0.00 0.00 2.52
2256 2432 6.761714 CACCTACAGTACATATGGGTTTTCTC 59.238 42.308 7.80 0.00 0.00 2.87
2257 2433 6.672657 ACCTACAGTACATATGGGTTTTCTCT 59.327 38.462 7.80 0.00 0.00 3.10
2258 2434 7.182206 ACCTACAGTACATATGGGTTTTCTCTT 59.818 37.037 7.80 0.00 0.00 2.85
2259 2435 8.047310 CCTACAGTACATATGGGTTTTCTCTTT 58.953 37.037 7.80 0.00 0.00 2.52
2260 2436 7.687941 ACAGTACATATGGGTTTTCTCTTTG 57.312 36.000 7.80 0.00 0.00 2.77
2261 2437 7.458397 ACAGTACATATGGGTTTTCTCTTTGA 58.542 34.615 7.80 0.00 0.00 2.69
2262 2438 7.942341 ACAGTACATATGGGTTTTCTCTTTGAA 59.058 33.333 7.80 0.00 0.00 2.69
2263 2439 8.960591 CAGTACATATGGGTTTTCTCTTTGAAT 58.039 33.333 7.80 0.00 34.24 2.57
2272 2448 9.541143 TGGGTTTTCTCTTTGAATAATGAAAAC 57.459 29.630 16.12 16.12 45.64 2.43
2273 2449 9.764363 GGGTTTTCTCTTTGAATAATGAAAACT 57.236 29.630 20.68 0.00 45.65 2.66
2318 2494 4.279169 ACATTTGTGCTACAGTTGCATCTT 59.721 37.500 12.99 0.00 42.69 2.40
2337 2513 5.416271 TCTTTTGCGGTAGTTTAGGATCT 57.584 39.130 0.00 0.00 0.00 2.75
2342 2518 4.021229 TGCGGTAGTTTAGGATCTTCAGA 58.979 43.478 0.00 0.00 0.00 3.27
2344 2520 4.338682 GCGGTAGTTTAGGATCTTCAGAGA 59.661 45.833 0.00 0.00 36.09 3.10
2345 2521 5.506649 GCGGTAGTTTAGGATCTTCAGAGAG 60.507 48.000 0.00 0.00 34.85 3.20
2346 2522 5.506649 CGGTAGTTTAGGATCTTCAGAGAGC 60.507 48.000 0.00 0.00 37.58 4.09
2347 2523 5.361285 GGTAGTTTAGGATCTTCAGAGAGCA 59.639 44.000 0.00 0.00 40.07 4.26
2348 2524 6.041523 GGTAGTTTAGGATCTTCAGAGAGCAT 59.958 42.308 0.00 0.00 40.07 3.79
2349 2525 6.160576 AGTTTAGGATCTTCAGAGAGCATC 57.839 41.667 0.00 0.00 40.07 3.91
2362 2538 2.191128 GAGCATCTTGGACAACCACT 57.809 50.000 0.00 0.00 46.80 4.00
2363 2539 2.079925 GAGCATCTTGGACAACCACTC 58.920 52.381 0.00 0.00 46.80 3.51
2364 2540 1.421268 AGCATCTTGGACAACCACTCA 59.579 47.619 0.00 0.00 46.80 3.41
2365 2541 1.537202 GCATCTTGGACAACCACTCAC 59.463 52.381 0.00 0.00 46.80 3.51
2366 2542 1.800586 CATCTTGGACAACCACTCACG 59.199 52.381 0.00 0.00 46.80 4.35
2367 2543 1.116308 TCTTGGACAACCACTCACGA 58.884 50.000 0.00 0.00 46.80 4.35
2368 2544 1.691976 TCTTGGACAACCACTCACGAT 59.308 47.619 0.00 0.00 46.80 3.73
2369 2545 2.069273 CTTGGACAACCACTCACGATC 58.931 52.381 0.00 0.00 46.80 3.69
2370 2546 1.044611 TGGACAACCACTCACGATCA 58.955 50.000 0.00 0.00 41.77 2.92
2371 2547 1.623311 TGGACAACCACTCACGATCAT 59.377 47.619 0.00 0.00 41.77 2.45
2372 2548 2.271800 GGACAACCACTCACGATCATC 58.728 52.381 0.00 0.00 35.97 2.92
2373 2549 2.353704 GGACAACCACTCACGATCATCA 60.354 50.000 0.00 0.00 35.97 3.07
2374 2550 3.325870 GACAACCACTCACGATCATCAA 58.674 45.455 0.00 0.00 0.00 2.57
2375 2551 3.067106 ACAACCACTCACGATCATCAAC 58.933 45.455 0.00 0.00 0.00 3.18
2376 2552 3.244215 ACAACCACTCACGATCATCAACT 60.244 43.478 0.00 0.00 0.00 3.16
2377 2553 2.964740 ACCACTCACGATCATCAACTG 58.035 47.619 0.00 0.00 0.00 3.16
2378 2554 1.662629 CCACTCACGATCATCAACTGC 59.337 52.381 0.00 0.00 0.00 4.40
2408 2584 2.046892 CCGCCAGGGAGTTCACAG 60.047 66.667 0.00 0.00 38.47 3.66
2429 2605 7.267857 CACAGAGACCATCAGTGAATAACATA 58.732 38.462 0.00 0.00 45.67 2.29
2433 2609 8.878211 AGAGACCATCAGTGAATAACATATGAT 58.122 33.333 10.38 0.00 37.88 2.45
2434 2610 9.149225 GAGACCATCAGTGAATAACATATGATC 57.851 37.037 10.38 2.99 36.41 2.92
2435 2611 8.099537 AGACCATCAGTGAATAACATATGATCC 58.900 37.037 10.38 0.00 36.41 3.36
2436 2612 7.170965 ACCATCAGTGAATAACATATGATCCC 58.829 38.462 10.38 0.00 36.41 3.85
2437 2613 6.314648 CCATCAGTGAATAACATATGATCCCG 59.685 42.308 10.38 0.00 36.41 5.14
2438 2614 6.419484 TCAGTGAATAACATATGATCCCGT 57.581 37.500 10.38 0.00 0.00 5.28
2439 2615 6.223120 TCAGTGAATAACATATGATCCCGTG 58.777 40.000 10.38 0.00 0.00 4.94
2440 2616 4.997395 AGTGAATAACATATGATCCCGTGC 59.003 41.667 10.38 0.00 0.00 5.34
2441 2617 3.993736 TGAATAACATATGATCCCGTGCG 59.006 43.478 10.38 0.00 0.00 5.34
2442 2618 1.790755 TAACATATGATCCCGTGCGC 58.209 50.000 10.38 0.00 0.00 6.09
2443 2619 1.221466 AACATATGATCCCGTGCGCG 61.221 55.000 13.88 13.88 37.95 6.86
2444 2620 1.372872 CATATGATCCCGTGCGCGA 60.373 57.895 23.45 1.41 41.33 5.87
2504 2680 4.188462 TGGAGTCACATAACTATTTGGCG 58.812 43.478 0.00 0.00 0.00 5.69
2506 2682 4.270325 GGAGTCACATAACTATTTGGCGTC 59.730 45.833 0.00 0.00 0.00 5.19
2517 2693 1.654317 TTTGGCGTCGTGTAGTGTTT 58.346 45.000 0.00 0.00 0.00 2.83
2525 2701 4.748023 CGTCGTGTAGTGTTTTGAAAGAG 58.252 43.478 0.00 0.00 0.00 2.85
2551 2727 3.515602 AGAAAGATCTTGGTTGCACCT 57.484 42.857 9.17 0.00 39.58 4.00
2731 2909 5.798015 TCAAAACGTGTAAAGTGTAGCAA 57.202 34.783 0.00 0.00 0.00 3.91
2734 2912 4.742438 AACGTGTAAAGTGTAGCAATGG 57.258 40.909 0.00 0.00 0.00 3.16
2776 2959 9.503427 CAAAGACTACCTTTAAACTTGAGTTTG 57.497 33.333 17.07 5.11 43.10 2.93
2858 3041 6.991531 ACGTACTTTGTTTATTGGTACCTGAA 59.008 34.615 14.36 0.00 31.92 3.02
2893 3076 6.162777 GTCTCTATTATGATGGGCAAGACTC 58.837 44.000 0.00 0.00 0.00 3.36
2894 3077 5.047731 TCTCTATTATGATGGGCAAGACTCG 60.048 44.000 0.00 0.00 0.00 4.18
2906 3089 2.159734 GCAAGACTCGCATGAAAGACAG 60.160 50.000 0.00 0.00 0.00 3.51
2924 3107 3.412386 ACAGAAAGCACATCCAAGTACC 58.588 45.455 0.00 0.00 0.00 3.34
2995 3180 4.598022 TCATTCCATGGTTCAGTGCATAA 58.402 39.130 12.58 0.00 0.00 1.90
3016 3201 8.868916 GCATAAATCGATAATCCTCTTTCTCTC 58.131 37.037 0.00 0.00 0.00 3.20
3034 3224 8.657074 TTTCTCTCTTTTCGAGTAACATTCAA 57.343 30.769 0.00 0.00 40.75 2.69
3075 3265 4.799564 TGCAAAATATCACACCTTTCCC 57.200 40.909 0.00 0.00 0.00 3.97
3110 3300 5.960202 AGTCAATATTGGAATTGGGAAGCTT 59.040 36.000 15.36 0.00 37.44 3.74
3155 3345 3.939066 ACTTATTGGACCAGTGTAGCAC 58.061 45.455 0.00 0.00 34.10 4.40
3170 3360 3.271014 CACGCAAGAAGCCTGCAT 58.729 55.556 0.00 0.00 41.38 3.96
3172 3362 0.097674 CACGCAAGAAGCCTGCATAC 59.902 55.000 0.00 0.00 41.38 2.39
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
95 96 0.880441 GGTTACGCCCGGCTTAAAAA 59.120 50.000 9.79 0.00 0.00 1.94
96 97 2.553962 GGTTACGCCCGGCTTAAAA 58.446 52.632 9.79 0.00 0.00 1.52
97 98 4.299756 GGTTACGCCCGGCTTAAA 57.700 55.556 9.79 0.00 0.00 1.52
106 107 2.019249 GTAATGGAAAGGGGTTACGCC 58.981 52.381 10.69 10.69 36.67 5.68
107 108 2.995283 AGTAATGGAAAGGGGTTACGC 58.005 47.619 0.00 0.00 0.00 4.42
108 109 3.128068 GCAAGTAATGGAAAGGGGTTACG 59.872 47.826 0.00 0.00 0.00 3.18
109 110 4.083565 TGCAAGTAATGGAAAGGGGTTAC 58.916 43.478 0.00 0.00 0.00 2.50
110 111 4.390129 TGCAAGTAATGGAAAGGGGTTA 57.610 40.909 0.00 0.00 0.00 2.85
111 112 3.252554 TGCAAGTAATGGAAAGGGGTT 57.747 42.857 0.00 0.00 0.00 4.11
112 113 2.990740 TGCAAGTAATGGAAAGGGGT 57.009 45.000 0.00 0.00 0.00 4.95
113 114 4.202010 CGTTATGCAAGTAATGGAAAGGGG 60.202 45.833 0.00 0.00 30.96 4.79
114 115 4.202010 CCGTTATGCAAGTAATGGAAAGGG 60.202 45.833 11.45 0.00 41.32 3.95
115 116 4.638421 TCCGTTATGCAAGTAATGGAAAGG 59.362 41.667 15.63 2.52 43.39 3.11
116 117 5.811399 TCCGTTATGCAAGTAATGGAAAG 57.189 39.130 15.63 0.00 43.39 2.62
119 120 6.824196 TGTATTTCCGTTATGCAAGTAATGGA 59.176 34.615 14.46 14.46 44.20 3.41
120 121 7.022055 TGTATTTCCGTTATGCAAGTAATGG 57.978 36.000 10.84 10.84 40.54 3.16
125 126 9.204570 GACTATATGTATTTCCGTTATGCAAGT 57.795 33.333 0.00 0.00 0.00 3.16
126 127 9.424319 AGACTATATGTATTTCCGTTATGCAAG 57.576 33.333 0.00 0.00 0.00 4.01
127 128 9.772973 AAGACTATATGTATTTCCGTTATGCAA 57.227 29.630 0.00 0.00 0.00 4.08
146 147 9.286170 GGTTTCCTTTTGAACTCTTAAGACTAT 57.714 33.333 0.00 0.00 31.05 2.12
147 148 8.491958 AGGTTTCCTTTTGAACTCTTAAGACTA 58.508 33.333 0.00 0.00 31.05 2.59
148 149 7.347252 AGGTTTCCTTTTGAACTCTTAAGACT 58.653 34.615 0.00 0.00 31.05 3.24
149 150 7.569639 AGGTTTCCTTTTGAACTCTTAAGAC 57.430 36.000 0.00 0.00 31.05 3.01
150 151 8.711170 TCTAGGTTTCCTTTTGAACTCTTAAGA 58.289 33.333 4.81 4.81 34.61 2.10
151 152 8.904099 TCTAGGTTTCCTTTTGAACTCTTAAG 57.096 34.615 0.00 0.00 34.61 1.85
152 153 9.689501 TTTCTAGGTTTCCTTTTGAACTCTTAA 57.310 29.630 0.00 0.00 34.61 1.85
153 154 9.338622 CTTTCTAGGTTTCCTTTTGAACTCTTA 57.661 33.333 0.00 0.00 34.61 2.10
154 155 7.285629 CCTTTCTAGGTTTCCTTTTGAACTCTT 59.714 37.037 0.00 0.00 36.74 2.85
155 156 6.773200 CCTTTCTAGGTTTCCTTTTGAACTCT 59.227 38.462 0.00 0.00 36.74 3.24
156 157 6.016192 CCCTTTCTAGGTTTCCTTTTGAACTC 60.016 42.308 0.00 0.00 40.19 3.01
157 158 5.833667 CCCTTTCTAGGTTTCCTTTTGAACT 59.166 40.000 0.00 0.00 40.19 3.01
158 159 5.831525 TCCCTTTCTAGGTTTCCTTTTGAAC 59.168 40.000 0.00 0.00 40.19 3.18
159 160 6.020881 TCCCTTTCTAGGTTTCCTTTTGAA 57.979 37.500 0.00 0.00 40.19 2.69
160 161 5.656549 TCCCTTTCTAGGTTTCCTTTTGA 57.343 39.130 0.00 0.00 40.19 2.69
161 162 6.724893 TTTCCCTTTCTAGGTTTCCTTTTG 57.275 37.500 0.00 0.00 40.19 2.44
162 163 6.183360 GCTTTTCCCTTTCTAGGTTTCCTTTT 60.183 38.462 0.00 0.00 40.19 2.27
163 164 5.304614 GCTTTTCCCTTTCTAGGTTTCCTTT 59.695 40.000 0.00 0.00 40.19 3.11
164 165 4.833380 GCTTTTCCCTTTCTAGGTTTCCTT 59.167 41.667 0.00 0.00 40.19 3.36
165 166 4.408276 GCTTTTCCCTTTCTAGGTTTCCT 58.592 43.478 0.00 0.00 40.19 3.36
166 167 3.190744 CGCTTTTCCCTTTCTAGGTTTCC 59.809 47.826 0.00 0.00 40.19 3.13
167 168 4.070009 TCGCTTTTCCCTTTCTAGGTTTC 58.930 43.478 0.00 0.00 40.19 2.78
168 169 4.072839 CTCGCTTTTCCCTTTCTAGGTTT 58.927 43.478 0.00 0.00 40.19 3.27
169 170 3.676093 CTCGCTTTTCCCTTTCTAGGTT 58.324 45.455 0.00 0.00 40.19 3.50
170 171 2.615747 GCTCGCTTTTCCCTTTCTAGGT 60.616 50.000 0.00 0.00 40.19 3.08
171 172 2.010497 GCTCGCTTTTCCCTTTCTAGG 58.990 52.381 0.00 0.00 41.60 3.02
172 173 2.933260 GAGCTCGCTTTTCCCTTTCTAG 59.067 50.000 0.00 0.00 0.00 2.43
173 174 2.301870 TGAGCTCGCTTTTCCCTTTCTA 59.698 45.455 9.64 0.00 0.00 2.10
174 175 1.072331 TGAGCTCGCTTTTCCCTTTCT 59.928 47.619 9.64 0.00 0.00 2.52
175 176 1.523758 TGAGCTCGCTTTTCCCTTTC 58.476 50.000 9.64 0.00 0.00 2.62
176 177 1.981256 TTGAGCTCGCTTTTCCCTTT 58.019 45.000 9.64 0.00 0.00 3.11
177 178 1.882623 CTTTGAGCTCGCTTTTCCCTT 59.117 47.619 9.64 0.00 0.00 3.95
178 179 1.528129 CTTTGAGCTCGCTTTTCCCT 58.472 50.000 9.64 0.00 0.00 4.20
179 180 0.109551 GCTTTGAGCTCGCTTTTCCC 60.110 55.000 9.64 0.00 38.45 3.97
180 181 0.593128 TGCTTTGAGCTCGCTTTTCC 59.407 50.000 9.64 0.00 42.97 3.13
181 182 1.664302 GGTGCTTTGAGCTCGCTTTTC 60.664 52.381 9.64 0.00 42.97 2.29
182 183 0.312102 GGTGCTTTGAGCTCGCTTTT 59.688 50.000 9.64 0.00 42.97 2.27
183 184 1.845809 CGGTGCTTTGAGCTCGCTTT 61.846 55.000 9.64 0.00 42.97 3.51
184 185 2.320587 CGGTGCTTTGAGCTCGCTT 61.321 57.895 9.64 0.00 42.97 4.68
185 186 2.740055 CGGTGCTTTGAGCTCGCT 60.740 61.111 9.64 0.00 42.97 4.93
187 188 2.740055 AGCGGTGCTTTGAGCTCG 60.740 61.111 9.64 6.67 42.97 5.03
188 189 2.684843 CCAGCGGTGCTTTGAGCTC 61.685 63.158 9.63 6.82 42.97 4.09
189 190 2.670934 CCAGCGGTGCTTTGAGCT 60.671 61.111 9.63 0.00 42.97 4.09
190 191 3.741476 CCCAGCGGTGCTTTGAGC 61.741 66.667 9.63 0.00 42.82 4.26
191 192 1.172180 TTTCCCAGCGGTGCTTTGAG 61.172 55.000 9.63 0.00 36.40 3.02
192 193 1.152860 TTTCCCAGCGGTGCTTTGA 60.153 52.632 9.63 0.00 36.40 2.69
193 194 1.007387 GTTTCCCAGCGGTGCTTTG 60.007 57.895 9.63 0.00 36.40 2.77
194 195 2.200337 GGTTTCCCAGCGGTGCTTT 61.200 57.895 9.63 0.00 36.40 3.51
195 196 2.597510 GGTTTCCCAGCGGTGCTT 60.598 61.111 9.63 0.00 36.40 3.91
196 197 4.660938 GGGTTTCCCAGCGGTGCT 62.661 66.667 9.63 0.00 44.65 4.40
205 206 0.603065 GTGCTCATTGTGGGTTTCCC 59.397 55.000 0.00 0.00 45.71 3.97
206 207 1.541588 GAGTGCTCATTGTGGGTTTCC 59.458 52.381 0.00 0.00 0.00 3.13
207 208 1.197721 CGAGTGCTCATTGTGGGTTTC 59.802 52.381 0.00 0.00 0.00 2.78
208 209 1.238439 CGAGTGCTCATTGTGGGTTT 58.762 50.000 0.00 0.00 0.00 3.27
209 210 1.237285 GCGAGTGCTCATTGTGGGTT 61.237 55.000 0.00 0.00 38.39 4.11
210 211 1.672356 GCGAGTGCTCATTGTGGGT 60.672 57.895 0.00 0.00 38.39 4.51
211 212 2.401766 GGCGAGTGCTCATTGTGGG 61.402 63.158 0.00 0.00 42.25 4.61
212 213 1.028330 ATGGCGAGTGCTCATTGTGG 61.028 55.000 0.00 0.00 42.25 4.17
213 214 0.376152 GATGGCGAGTGCTCATTGTG 59.624 55.000 0.00 0.00 42.25 3.33
214 215 1.086067 CGATGGCGAGTGCTCATTGT 61.086 55.000 0.00 0.00 42.25 2.71
215 216 0.807275 TCGATGGCGAGTGCTCATTG 60.807 55.000 0.00 0.00 42.51 2.82
216 217 1.517361 TCGATGGCGAGTGCTCATT 59.483 52.632 0.00 0.00 42.51 2.57
217 218 3.210302 TCGATGGCGAGTGCTCAT 58.790 55.556 0.00 0.00 42.51 2.90
225 226 3.451894 TGAGCTGCTCGATGGCGA 61.452 61.111 23.35 2.34 45.71 5.54
226 227 3.260483 GTGAGCTGCTCGATGGCG 61.260 66.667 23.35 0.00 39.35 5.69
227 228 2.894387 GGTGAGCTGCTCGATGGC 60.894 66.667 23.35 11.21 32.35 4.40
228 229 1.145598 ATGGTGAGCTGCTCGATGG 59.854 57.895 23.35 0.00 32.35 3.51
229 230 1.158484 CCATGGTGAGCTGCTCGATG 61.158 60.000 23.35 21.74 32.35 3.84
230 231 1.145598 CCATGGTGAGCTGCTCGAT 59.854 57.895 23.35 12.89 32.35 3.59
231 232 2.580815 CCATGGTGAGCTGCTCGA 59.419 61.111 23.35 11.19 32.35 4.04
232 233 2.513204 CCCATGGTGAGCTGCTCG 60.513 66.667 23.35 9.53 32.35 5.03
233 234 2.124403 CCCCATGGTGAGCTGCTC 60.124 66.667 22.38 22.38 0.00 4.26
234 235 4.437587 GCCCCATGGTGAGCTGCT 62.438 66.667 11.73 0.00 0.00 4.24
236 237 4.100084 TCGCCCCATGGTGAGCTG 62.100 66.667 11.73 7.42 46.20 4.24
241 242 2.969827 GGTTTTCGCCCCATGGTG 59.030 61.111 11.73 0.00 43.93 4.17
242 243 2.675075 CGGTTTTCGCCCCATGGT 60.675 61.111 11.73 0.00 0.00 3.55
243 244 1.974343 TTCGGTTTTCGCCCCATGG 60.974 57.895 4.14 4.14 39.05 3.66
244 245 1.211709 GTTCGGTTTTCGCCCCATG 59.788 57.895 0.00 0.00 39.05 3.66
245 246 1.074248 AGTTCGGTTTTCGCCCCAT 59.926 52.632 0.00 0.00 39.05 4.00
246 247 1.894756 CAGTTCGGTTTTCGCCCCA 60.895 57.895 0.00 0.00 39.05 4.96
247 248 1.598685 TCAGTTCGGTTTTCGCCCC 60.599 57.895 0.00 0.00 39.05 5.80
248 249 1.161563 TGTCAGTTCGGTTTTCGCCC 61.162 55.000 0.00 0.00 39.05 6.13
249 250 0.041576 GTGTCAGTTCGGTTTTCGCC 60.042 55.000 0.00 0.00 39.05 5.54
250 251 0.041576 GGTGTCAGTTCGGTTTTCGC 60.042 55.000 0.00 0.00 39.05 4.70
251 252 0.584876 GGGTGTCAGTTCGGTTTTCG 59.415 55.000 0.00 0.00 40.90 3.46
252 253 1.963172 AGGGTGTCAGTTCGGTTTTC 58.037 50.000 0.00 0.00 0.00 2.29
253 254 3.564053 TTAGGGTGTCAGTTCGGTTTT 57.436 42.857 0.00 0.00 0.00 2.43
254 255 3.564053 TTTAGGGTGTCAGTTCGGTTT 57.436 42.857 0.00 0.00 0.00 3.27
255 256 3.208594 GTTTTAGGGTGTCAGTTCGGTT 58.791 45.455 0.00 0.00 0.00 4.44
256 257 2.486013 GGTTTTAGGGTGTCAGTTCGGT 60.486 50.000 0.00 0.00 0.00 4.69
257 258 2.148768 GGTTTTAGGGTGTCAGTTCGG 58.851 52.381 0.00 0.00 0.00 4.30
258 259 2.806244 CAGGTTTTAGGGTGTCAGTTCG 59.194 50.000 0.00 0.00 0.00 3.95
259 260 2.552743 GCAGGTTTTAGGGTGTCAGTTC 59.447 50.000 0.00 0.00 0.00 3.01
260 261 2.092103 TGCAGGTTTTAGGGTGTCAGTT 60.092 45.455 0.00 0.00 0.00 3.16
261 262 1.493022 TGCAGGTTTTAGGGTGTCAGT 59.507 47.619 0.00 0.00 0.00 3.41
262 263 2.154462 CTGCAGGTTTTAGGGTGTCAG 58.846 52.381 5.57 0.00 0.00 3.51
263 264 1.771854 TCTGCAGGTTTTAGGGTGTCA 59.228 47.619 15.13 0.00 0.00 3.58
264 265 2.152016 GTCTGCAGGTTTTAGGGTGTC 58.848 52.381 15.13 0.00 0.00 3.67
265 266 1.774856 AGTCTGCAGGTTTTAGGGTGT 59.225 47.619 15.13 0.00 0.00 4.16
266 267 2.568623 AGTCTGCAGGTTTTAGGGTG 57.431 50.000 15.13 0.00 0.00 4.61
267 268 2.305052 GGTAGTCTGCAGGTTTTAGGGT 59.695 50.000 15.13 0.00 0.00 4.34
268 269 2.572104 AGGTAGTCTGCAGGTTTTAGGG 59.428 50.000 15.13 0.00 0.00 3.53
269 270 3.515901 AGAGGTAGTCTGCAGGTTTTAGG 59.484 47.826 15.13 0.00 32.57 2.69
270 271 4.810191 AGAGGTAGTCTGCAGGTTTTAG 57.190 45.455 15.13 0.00 32.57 1.85
271 272 6.869206 ATTAGAGGTAGTCTGCAGGTTTTA 57.131 37.500 15.13 0.00 36.64 1.52
272 273 5.763876 ATTAGAGGTAGTCTGCAGGTTTT 57.236 39.130 15.13 0.00 36.64 2.43
273 274 6.668283 TCTTATTAGAGGTAGTCTGCAGGTTT 59.332 38.462 15.13 2.23 36.64 3.27
274 275 6.097129 GTCTTATTAGAGGTAGTCTGCAGGTT 59.903 42.308 15.13 4.95 36.64 3.50
275 276 5.595133 GTCTTATTAGAGGTAGTCTGCAGGT 59.405 44.000 15.13 4.16 36.64 4.00
276 277 5.010213 GGTCTTATTAGAGGTAGTCTGCAGG 59.990 48.000 15.13 0.00 36.64 4.85
277 278 5.594725 TGGTCTTATTAGAGGTAGTCTGCAG 59.405 44.000 7.63 7.63 36.64 4.41
278 279 5.516044 TGGTCTTATTAGAGGTAGTCTGCA 58.484 41.667 0.00 0.00 36.64 4.41
279 280 5.828859 TCTGGTCTTATTAGAGGTAGTCTGC 59.171 44.000 0.00 0.00 36.64 4.26
280 281 7.776030 TCTTCTGGTCTTATTAGAGGTAGTCTG 59.224 40.741 0.00 0.00 36.64 3.51
281 282 7.874252 TCTTCTGGTCTTATTAGAGGTAGTCT 58.126 38.462 0.00 0.00 39.59 3.24
282 283 7.776500 ACTCTTCTGGTCTTATTAGAGGTAGTC 59.224 40.741 0.00 0.00 34.79 2.59
283 284 7.645002 ACTCTTCTGGTCTTATTAGAGGTAGT 58.355 38.462 0.00 0.00 34.79 2.73
284 285 8.528044 AACTCTTCTGGTCTTATTAGAGGTAG 57.472 38.462 0.00 0.00 34.79 3.18
285 286 8.114102 TGAACTCTTCTGGTCTTATTAGAGGTA 58.886 37.037 0.00 0.00 34.79 3.08
286 287 6.954684 TGAACTCTTCTGGTCTTATTAGAGGT 59.045 38.462 0.00 0.00 34.79 3.85
287 288 7.411486 TGAACTCTTCTGGTCTTATTAGAGG 57.589 40.000 0.00 0.00 34.79 3.69
288 289 9.145865 GTTTGAACTCTTCTGGTCTTATTAGAG 57.854 37.037 0.00 0.00 36.18 2.43
289 290 8.647796 TGTTTGAACTCTTCTGGTCTTATTAGA 58.352 33.333 0.00 0.00 0.00 2.10
290 291 8.833231 TGTTTGAACTCTTCTGGTCTTATTAG 57.167 34.615 0.00 0.00 0.00 1.73
291 292 9.273016 CTTGTTTGAACTCTTCTGGTCTTATTA 57.727 33.333 0.00 0.00 0.00 0.98
292 293 7.775561 ACTTGTTTGAACTCTTCTGGTCTTATT 59.224 33.333 0.00 0.00 0.00 1.40
293 294 7.283329 ACTTGTTTGAACTCTTCTGGTCTTAT 58.717 34.615 0.00 0.00 0.00 1.73
294 295 6.650120 ACTTGTTTGAACTCTTCTGGTCTTA 58.350 36.000 0.00 0.00 0.00 2.10
295 296 5.501156 ACTTGTTTGAACTCTTCTGGTCTT 58.499 37.500 0.00 0.00 0.00 3.01
296 297 5.104259 ACTTGTTTGAACTCTTCTGGTCT 57.896 39.130 0.00 0.00 0.00 3.85
297 298 5.819825 AACTTGTTTGAACTCTTCTGGTC 57.180 39.130 0.00 0.00 0.00 4.02
298 299 7.881775 ATAAACTTGTTTGAACTCTTCTGGT 57.118 32.000 8.79 0.00 0.00 4.00
299 300 9.884465 CTTATAAACTTGTTTGAACTCTTCTGG 57.116 33.333 8.79 0.00 0.00 3.86
300 301 9.884465 CCTTATAAACTTGTTTGAACTCTTCTG 57.116 33.333 8.79 0.00 0.00 3.02
301 302 8.568794 GCCTTATAAACTTGTTTGAACTCTTCT 58.431 33.333 8.79 0.00 0.00 2.85
302 303 7.808381 GGCCTTATAAACTTGTTTGAACTCTTC 59.192 37.037 8.79 0.00 0.00 2.87
303 304 7.286775 TGGCCTTATAAACTTGTTTGAACTCTT 59.713 33.333 3.32 0.00 0.00 2.85
304 305 6.775629 TGGCCTTATAAACTTGTTTGAACTCT 59.224 34.615 3.32 0.00 0.00 3.24
305 306 6.861572 GTGGCCTTATAAACTTGTTTGAACTC 59.138 38.462 3.32 0.00 0.00 3.01
306 307 6.549736 AGTGGCCTTATAAACTTGTTTGAACT 59.450 34.615 3.32 0.00 0.00 3.01
307 308 6.745116 AGTGGCCTTATAAACTTGTTTGAAC 58.255 36.000 3.32 0.00 0.00 3.18
308 309 6.015772 GGAGTGGCCTTATAAACTTGTTTGAA 60.016 38.462 3.32 3.05 0.00 2.69
309 310 5.475564 GGAGTGGCCTTATAAACTTGTTTGA 59.524 40.000 3.32 0.00 0.00 2.69
310 311 5.242838 TGGAGTGGCCTTATAAACTTGTTTG 59.757 40.000 3.32 0.00 37.63 2.93
311 312 5.390387 TGGAGTGGCCTTATAAACTTGTTT 58.610 37.500 3.32 4.14 37.63 2.83
312 313 4.993028 TGGAGTGGCCTTATAAACTTGTT 58.007 39.130 3.32 0.00 37.63 2.83
313 314 4.288626 TCTGGAGTGGCCTTATAAACTTGT 59.711 41.667 3.32 0.00 37.63 3.16
314 315 4.636206 GTCTGGAGTGGCCTTATAAACTTG 59.364 45.833 3.32 0.00 37.63 3.16
315 316 4.288626 TGTCTGGAGTGGCCTTATAAACTT 59.711 41.667 3.32 0.00 37.63 2.66
316 317 3.844211 TGTCTGGAGTGGCCTTATAAACT 59.156 43.478 3.32 0.00 37.63 2.66
317 318 3.939592 GTGTCTGGAGTGGCCTTATAAAC 59.060 47.826 3.32 0.00 37.63 2.01
318 319 3.585289 TGTGTCTGGAGTGGCCTTATAAA 59.415 43.478 3.32 0.00 37.63 1.40
319 320 3.178046 TGTGTCTGGAGTGGCCTTATAA 58.822 45.455 3.32 0.00 37.63 0.98
320 321 2.827755 TGTGTCTGGAGTGGCCTTATA 58.172 47.619 3.32 0.00 37.63 0.98
321 322 1.656587 TGTGTCTGGAGTGGCCTTAT 58.343 50.000 3.32 0.00 37.63 1.73
322 323 1.429930 TTGTGTCTGGAGTGGCCTTA 58.570 50.000 3.32 0.00 37.63 2.69
323 324 0.550914 TTTGTGTCTGGAGTGGCCTT 59.449 50.000 3.32 0.00 37.63 4.35
324 325 0.550914 TTTTGTGTCTGGAGTGGCCT 59.449 50.000 3.32 0.00 37.63 5.19
325 326 0.668535 GTTTTGTGTCTGGAGTGGCC 59.331 55.000 0.00 0.00 37.10 5.36
326 327 1.388547 TGTTTTGTGTCTGGAGTGGC 58.611 50.000 0.00 0.00 0.00 5.01
327 328 2.287788 GCATGTTTTGTGTCTGGAGTGG 60.288 50.000 0.00 0.00 0.00 4.00
328 329 2.602933 CGCATGTTTTGTGTCTGGAGTG 60.603 50.000 0.00 0.00 0.00 3.51
329 330 1.603802 CGCATGTTTTGTGTCTGGAGT 59.396 47.619 0.00 0.00 0.00 3.85
330 331 1.664016 GCGCATGTTTTGTGTCTGGAG 60.664 52.381 0.30 0.00 38.15 3.86
331 332 0.310543 GCGCATGTTTTGTGTCTGGA 59.689 50.000 0.30 0.00 38.15 3.86
332 333 0.664166 GGCGCATGTTTTGTGTCTGG 60.664 55.000 10.83 0.00 37.47 3.86
333 334 0.664166 GGGCGCATGTTTTGTGTCTG 60.664 55.000 10.83 0.00 40.37 3.51
334 335 1.106351 TGGGCGCATGTTTTGTGTCT 61.106 50.000 10.83 0.00 40.37 3.41
335 336 0.939106 GTGGGCGCATGTTTTGTGTC 60.939 55.000 10.83 0.00 39.79 3.67
336 337 1.067250 GTGGGCGCATGTTTTGTGT 59.933 52.632 10.83 0.00 38.15 3.72
337 338 2.015627 CGTGGGCGCATGTTTTGTG 61.016 57.895 10.83 0.00 38.93 3.33
338 339 2.334653 CGTGGGCGCATGTTTTGT 59.665 55.556 10.83 0.00 0.00 2.83
349 350 3.273080 CTTTTGCTCCTGCGTGGGC 62.273 63.158 0.00 0.00 43.34 5.36
350 351 2.629656 CCTTTTGCTCCTGCGTGGG 61.630 63.158 0.00 0.00 43.34 4.61
351 352 1.600636 TCCTTTTGCTCCTGCGTGG 60.601 57.895 0.00 0.00 43.34 4.94
352 353 0.886490 AGTCCTTTTGCTCCTGCGTG 60.886 55.000 0.00 0.00 43.34 5.34
353 354 0.685097 TAGTCCTTTTGCTCCTGCGT 59.315 50.000 0.00 0.00 43.34 5.24
354 355 1.936547 GATAGTCCTTTTGCTCCTGCG 59.063 52.381 0.00 0.00 43.34 5.18
355 356 2.293170 GGATAGTCCTTTTGCTCCTGC 58.707 52.381 0.00 0.00 34.88 4.85
356 357 2.239654 TGGGATAGTCCTTTTGCTCCTG 59.760 50.000 0.00 0.00 36.57 3.86
357 358 2.507471 CTGGGATAGTCCTTTTGCTCCT 59.493 50.000 0.00 0.00 36.57 3.69
358 359 2.505819 TCTGGGATAGTCCTTTTGCTCC 59.494 50.000 0.00 0.00 36.57 4.70
359 360 3.055094 TGTCTGGGATAGTCCTTTTGCTC 60.055 47.826 0.00 0.00 36.57 4.26
360 361 2.912956 TGTCTGGGATAGTCCTTTTGCT 59.087 45.455 0.00 0.00 36.57 3.91
361 362 3.350219 TGTCTGGGATAGTCCTTTTGC 57.650 47.619 0.00 0.00 36.57 3.68
362 363 6.127054 TGTCTATGTCTGGGATAGTCCTTTTG 60.127 42.308 0.00 0.00 36.57 2.44
363 364 5.964477 TGTCTATGTCTGGGATAGTCCTTTT 59.036 40.000 0.00 0.00 36.57 2.27
364 365 5.529289 TGTCTATGTCTGGGATAGTCCTTT 58.471 41.667 0.00 0.00 36.57 3.11
365 366 5.144159 TGTCTATGTCTGGGATAGTCCTT 57.856 43.478 0.00 0.00 36.57 3.36
366 367 4.816048 TGTCTATGTCTGGGATAGTCCT 57.184 45.455 0.00 0.00 36.57 3.85
367 368 4.322349 GCATGTCTATGTCTGGGATAGTCC 60.322 50.000 0.00 0.00 36.65 3.85
368 369 4.617067 CGCATGTCTATGTCTGGGATAGTC 60.617 50.000 0.00 0.00 36.65 2.59
369 370 3.256879 CGCATGTCTATGTCTGGGATAGT 59.743 47.826 0.00 0.00 36.65 2.12
370 371 3.842820 CGCATGTCTATGTCTGGGATAG 58.157 50.000 0.00 0.00 36.65 2.08
371 372 2.029020 GCGCATGTCTATGTCTGGGATA 60.029 50.000 0.30 0.00 36.65 2.59
372 373 1.270518 GCGCATGTCTATGTCTGGGAT 60.271 52.381 0.30 0.00 36.65 3.85
373 374 0.104855 GCGCATGTCTATGTCTGGGA 59.895 55.000 0.30 0.00 36.65 4.37
374 375 0.882042 GGCGCATGTCTATGTCTGGG 60.882 60.000 10.83 0.00 36.65 4.45
375 376 0.882042 GGGCGCATGTCTATGTCTGG 60.882 60.000 10.83 0.00 36.65 3.86
376 377 0.179076 TGGGCGCATGTCTATGTCTG 60.179 55.000 10.83 0.00 36.65 3.51
377 378 0.179073 GTGGGCGCATGTCTATGTCT 60.179 55.000 10.83 0.00 36.65 3.41
378 379 0.461870 TGTGGGCGCATGTCTATGTC 60.462 55.000 10.83 0.00 36.65 3.06
379 380 0.744414 GTGTGGGCGCATGTCTATGT 60.744 55.000 10.83 0.00 36.65 2.29
380 381 0.744057 TGTGTGGGCGCATGTCTATG 60.744 55.000 10.83 0.00 37.36 2.23
381 382 0.462581 CTGTGTGGGCGCATGTCTAT 60.463 55.000 10.83 0.00 34.29 1.98
382 383 1.079197 CTGTGTGGGCGCATGTCTA 60.079 57.895 10.83 0.00 34.29 2.59
383 384 1.826340 TACTGTGTGGGCGCATGTCT 61.826 55.000 10.83 0.00 34.29 3.41
384 385 1.375396 TACTGTGTGGGCGCATGTC 60.375 57.895 10.83 1.35 34.29 3.06
385 386 1.671054 GTACTGTGTGGGCGCATGT 60.671 57.895 10.83 6.80 34.29 3.21
386 387 2.398554 GGTACTGTGTGGGCGCATG 61.399 63.158 10.83 0.70 34.29 4.06
387 388 2.046314 GGTACTGTGTGGGCGCAT 60.046 61.111 10.83 0.00 34.29 4.73
388 389 4.673298 CGGTACTGTGTGGGCGCA 62.673 66.667 10.83 0.00 0.00 6.09
389 390 4.675029 ACGGTACTGTGTGGGCGC 62.675 66.667 6.52 0.00 0.00 6.53
390 391 2.736995 CACGGTACTGTGTGGGCG 60.737 66.667 24.16 4.61 35.12 6.13
396 397 4.552355 TGAATGAAGTACACGGTACTGTG 58.448 43.478 29.28 29.28 45.41 3.66
418 419 6.575162 AAAATCTCACTGCCTAATTTCGTT 57.425 33.333 0.00 0.00 0.00 3.85
444 445 1.405463 TCGTAGCGTACTACTCGAGGA 59.595 52.381 18.41 7.44 45.63 3.71
483 484 3.249080 GTCCGTTTTCTTCGTGGAAATCA 59.751 43.478 6.44 0.00 35.51 2.57
493 494 3.765026 TGCTTGTTTGTCCGTTTTCTTC 58.235 40.909 0.00 0.00 0.00 2.87
495 496 3.769536 CTTGCTTGTTTGTCCGTTTTCT 58.230 40.909 0.00 0.00 0.00 2.52
501 502 0.028770 TTCGCTTGCTTGTTTGTCCG 59.971 50.000 0.00 0.00 0.00 4.79
522 524 1.450531 GAAATGGGATCGGCCTGCAG 61.451 60.000 6.78 6.78 36.66 4.41
524 526 2.546494 CGAAATGGGATCGGCCTGC 61.546 63.158 0.00 0.00 36.68 4.85
525 527 0.250467 ATCGAAATGGGATCGGCCTG 60.250 55.000 0.00 0.00 40.59 4.85
547 549 4.440880 CTGGAGATGGAGAAGTTGATGTC 58.559 47.826 0.00 0.00 0.00 3.06
585 587 0.108424 GTGCTCTGCCCACTCACTAG 60.108 60.000 0.00 0.00 0.00 2.57
650 668 6.641314 TCTCCGTATATTCTTGAATTCTTCGC 59.359 38.462 7.05 0.00 0.00 4.70
651 669 8.076781 TCTCTCCGTATATTCTTGAATTCTTCG 58.923 37.037 7.05 0.00 0.00 3.79
764 782 7.278868 CAGAGGCCTAAAAGAAATAGTACTGTG 59.721 40.741 4.42 0.00 0.00 3.66
1287 1352 1.666011 GTGCGTCTCCAGGAACTCA 59.334 57.895 0.00 0.00 34.60 3.41
1365 1457 1.608055 CAGCCTTGGACATGTTCACA 58.392 50.000 6.25 0.13 0.00 3.58
1581 1757 3.030652 CGAACGCCCAGCAACTTT 58.969 55.556 0.00 0.00 0.00 2.66
2039 2215 3.470888 CCAGTAGTCCTGCCCGGG 61.471 72.222 19.09 19.09 40.06 5.73
2040 2216 3.470888 CCCAGTAGTCCTGCCCGG 61.471 72.222 0.00 0.00 40.06 5.73
2050 2226 2.474410 GGTTCTTCACCACCCAGTAG 57.526 55.000 0.00 0.00 46.42 2.57
2149 2325 1.046472 CCATGGTCGGGTAGTAGGCA 61.046 60.000 2.57 0.00 0.00 4.75
2203 2379 5.448768 CGTGTTGTAGGTCTGTAGGTGATAG 60.449 48.000 0.00 0.00 0.00 2.08
2208 2384 1.891150 CCGTGTTGTAGGTCTGTAGGT 59.109 52.381 0.00 0.00 0.00 3.08
2209 2385 1.403780 GCCGTGTTGTAGGTCTGTAGG 60.404 57.143 0.00 0.00 0.00 3.18
2211 2387 0.241749 CGCCGTGTTGTAGGTCTGTA 59.758 55.000 0.00 0.00 0.00 2.74
2215 2391 2.356553 TGCGCCGTGTTGTAGGTC 60.357 61.111 4.18 0.00 0.00 3.85
2216 2392 2.663852 GTGCGCCGTGTTGTAGGT 60.664 61.111 4.18 0.00 0.00 3.08
2217 2393 2.495366 TAGGTGCGCCGTGTTGTAGG 62.495 60.000 11.42 0.00 40.50 3.18
2218 2394 1.080366 TAGGTGCGCCGTGTTGTAG 60.080 57.895 11.42 0.00 40.50 2.74
2220 2396 2.663852 GTAGGTGCGCCGTGTTGT 60.664 61.111 11.42 0.00 40.50 3.32
2222 2398 1.808531 TACTGTAGGTGCGCCGTGTT 61.809 55.000 11.42 0.00 40.50 3.32
2225 2401 1.601419 ATGTACTGTAGGTGCGCCGT 61.601 55.000 11.42 5.16 40.50 5.68
2226 2402 0.382873 TATGTACTGTAGGTGCGCCG 59.617 55.000 11.42 0.00 40.50 6.46
2227 2403 2.404215 CATATGTACTGTAGGTGCGCC 58.596 52.381 8.71 8.71 33.14 6.53
2228 2404 2.404215 CCATATGTACTGTAGGTGCGC 58.596 52.381 0.00 0.00 33.14 6.09
2229 2405 2.364324 ACCCATATGTACTGTAGGTGCG 59.636 50.000 1.24 0.00 33.14 5.34
2230 2406 4.417426 AACCCATATGTACTGTAGGTGC 57.583 45.455 1.24 0.00 0.00 5.01
2231 2407 6.650120 AGAAAACCCATATGTACTGTAGGTG 58.350 40.000 1.24 0.00 0.00 4.00
2232 2408 6.672657 AGAGAAAACCCATATGTACTGTAGGT 59.327 38.462 1.24 0.00 0.00 3.08
2233 2409 7.125792 AGAGAAAACCCATATGTACTGTAGG 57.874 40.000 1.24 0.00 0.00 3.18
2234 2410 8.883731 CAAAGAGAAAACCCATATGTACTGTAG 58.116 37.037 1.24 0.00 0.00 2.74
2235 2411 8.598916 TCAAAGAGAAAACCCATATGTACTGTA 58.401 33.333 1.24 0.00 0.00 2.74
2236 2412 7.458397 TCAAAGAGAAAACCCATATGTACTGT 58.542 34.615 1.24 0.00 0.00 3.55
2237 2413 7.921786 TCAAAGAGAAAACCCATATGTACTG 57.078 36.000 1.24 0.00 0.00 2.74
2246 2422 9.541143 GTTTTCATTATTCAAAGAGAAAACCCA 57.459 29.630 14.32 0.00 44.16 4.51
2257 2433 9.733556 TGCTACTCCTAGTTTTCATTATTCAAA 57.266 29.630 0.00 0.00 0.00 2.69
2258 2434 9.383519 CTGCTACTCCTAGTTTTCATTATTCAA 57.616 33.333 0.00 0.00 0.00 2.69
2259 2435 8.540388 ACTGCTACTCCTAGTTTTCATTATTCA 58.460 33.333 0.00 0.00 0.00 2.57
2260 2436 8.950208 ACTGCTACTCCTAGTTTTCATTATTC 57.050 34.615 0.00 0.00 0.00 1.75
2261 2437 8.763601 AGACTGCTACTCCTAGTTTTCATTATT 58.236 33.333 0.00 0.00 0.00 1.40
2262 2438 8.200792 CAGACTGCTACTCCTAGTTTTCATTAT 58.799 37.037 0.00 0.00 0.00 1.28
2263 2439 7.363880 CCAGACTGCTACTCCTAGTTTTCATTA 60.364 40.741 0.00 0.00 0.00 1.90
2264 2440 6.402222 CAGACTGCTACTCCTAGTTTTCATT 58.598 40.000 0.00 0.00 0.00 2.57
2265 2441 5.105146 CCAGACTGCTACTCCTAGTTTTCAT 60.105 44.000 0.00 0.00 0.00 2.57
2266 2442 4.220821 CCAGACTGCTACTCCTAGTTTTCA 59.779 45.833 0.00 0.00 0.00 2.69
2267 2443 4.749976 CCAGACTGCTACTCCTAGTTTTC 58.250 47.826 0.00 0.00 0.00 2.29
2268 2444 3.055747 GCCAGACTGCTACTCCTAGTTTT 60.056 47.826 0.00 0.00 0.00 2.43
2269 2445 2.498078 GCCAGACTGCTACTCCTAGTTT 59.502 50.000 0.00 0.00 0.00 2.66
2270 2446 2.104170 GCCAGACTGCTACTCCTAGTT 58.896 52.381 0.00 0.00 0.00 2.24
2271 2447 1.686741 GGCCAGACTGCTACTCCTAGT 60.687 57.143 0.00 0.00 0.00 2.57
2272 2448 1.036707 GGCCAGACTGCTACTCCTAG 58.963 60.000 0.00 0.00 0.00 3.02
2273 2449 0.631753 AGGCCAGACTGCTACTCCTA 59.368 55.000 5.01 0.00 0.00 2.94
2274 2450 0.975040 CAGGCCAGACTGCTACTCCT 60.975 60.000 5.01 0.00 0.00 3.69
2275 2451 1.519719 CAGGCCAGACTGCTACTCC 59.480 63.158 5.01 0.00 0.00 3.85
2318 2494 5.046878 TCTGAAGATCCTAAACTACCGCAAA 60.047 40.000 0.00 0.00 0.00 3.68
2337 2513 3.557898 GGTTGTCCAAGATGCTCTCTGAA 60.558 47.826 0.00 0.00 33.29 3.02
2342 2518 1.701847 AGTGGTTGTCCAAGATGCTCT 59.298 47.619 0.00 0.00 46.15 4.09
2344 2520 1.421268 TGAGTGGTTGTCCAAGATGCT 59.579 47.619 0.00 0.00 46.15 3.79
2345 2521 1.537202 GTGAGTGGTTGTCCAAGATGC 59.463 52.381 0.00 0.00 46.15 3.91
2346 2522 1.800586 CGTGAGTGGTTGTCCAAGATG 59.199 52.381 0.00 0.00 46.15 2.90
2347 2523 1.691976 TCGTGAGTGGTTGTCCAAGAT 59.308 47.619 0.00 0.00 46.15 2.40
2348 2524 1.116308 TCGTGAGTGGTTGTCCAAGA 58.884 50.000 0.00 0.00 46.15 3.02
2349 2525 2.069273 GATCGTGAGTGGTTGTCCAAG 58.931 52.381 0.00 0.00 46.15 3.61
2350 2526 1.414550 TGATCGTGAGTGGTTGTCCAA 59.585 47.619 0.00 0.00 46.15 3.53
2351 2527 1.044611 TGATCGTGAGTGGTTGTCCA 58.955 50.000 0.00 0.00 42.05 4.02
2352 2528 2.271800 GATGATCGTGAGTGGTTGTCC 58.728 52.381 0.00 0.00 0.00 4.02
2353 2529 2.959516 TGATGATCGTGAGTGGTTGTC 58.040 47.619 0.00 0.00 0.00 3.18
2354 2530 3.067106 GTTGATGATCGTGAGTGGTTGT 58.933 45.455 0.00 0.00 0.00 3.32
2355 2531 3.124128 CAGTTGATGATCGTGAGTGGTTG 59.876 47.826 0.00 0.00 0.00 3.77
2356 2532 3.329386 CAGTTGATGATCGTGAGTGGTT 58.671 45.455 0.00 0.00 0.00 3.67
2357 2533 2.932622 GCAGTTGATGATCGTGAGTGGT 60.933 50.000 0.00 0.00 0.00 4.16
2358 2534 1.662629 GCAGTTGATGATCGTGAGTGG 59.337 52.381 0.00 0.00 0.00 4.00
2359 2535 2.602211 GAGCAGTTGATGATCGTGAGTG 59.398 50.000 0.00 0.00 34.03 3.51
2360 2536 2.886081 GAGCAGTTGATGATCGTGAGT 58.114 47.619 0.00 0.00 34.03 3.41
2366 2542 6.256686 GTTTCATTCAGAGCAGTTGATGATC 58.743 40.000 0.00 0.00 44.97 2.92
2367 2543 5.125097 GGTTTCATTCAGAGCAGTTGATGAT 59.875 40.000 0.00 0.00 0.00 2.45
2368 2544 4.456911 GGTTTCATTCAGAGCAGTTGATGA 59.543 41.667 0.00 0.00 0.00 2.92
2369 2545 4.380233 GGGTTTCATTCAGAGCAGTTGATG 60.380 45.833 0.00 0.00 0.00 3.07
2370 2546 3.760684 GGGTTTCATTCAGAGCAGTTGAT 59.239 43.478 0.00 0.00 0.00 2.57
2371 2547 3.149196 GGGTTTCATTCAGAGCAGTTGA 58.851 45.455 0.00 0.00 0.00 3.18
2372 2548 2.095567 CGGGTTTCATTCAGAGCAGTTG 60.096 50.000 0.00 0.00 0.00 3.16
2373 2549 2.154462 CGGGTTTCATTCAGAGCAGTT 58.846 47.619 0.00 0.00 0.00 3.16
2374 2550 1.813513 CGGGTTTCATTCAGAGCAGT 58.186 50.000 0.00 0.00 0.00 4.40
2375 2551 0.449388 GCGGGTTTCATTCAGAGCAG 59.551 55.000 0.00 0.00 0.00 4.24
2376 2552 0.960364 GGCGGGTTTCATTCAGAGCA 60.960 55.000 0.00 0.00 0.00 4.26
2377 2553 0.960364 TGGCGGGTTTCATTCAGAGC 60.960 55.000 0.00 0.00 0.00 4.09
2378 2554 1.089920 CTGGCGGGTTTCATTCAGAG 58.910 55.000 0.00 0.00 0.00 3.35
2408 2584 9.149225 GATCATATGTTATTCACTGATGGTCTC 57.851 37.037 1.90 0.00 34.22 3.36
2437 2613 2.588146 TAGTTACCTCGCTCGCGCAC 62.588 60.000 8.75 0.00 39.59 5.34
2438 2614 1.925415 TTAGTTACCTCGCTCGCGCA 61.925 55.000 8.75 0.00 39.59 6.09
2439 2615 1.201098 CTTAGTTACCTCGCTCGCGC 61.201 60.000 0.00 0.00 39.59 6.86
2440 2616 0.591741 CCTTAGTTACCTCGCTCGCG 60.592 60.000 0.00 0.00 41.35 5.87
2441 2617 0.737219 TCCTTAGTTACCTCGCTCGC 59.263 55.000 0.00 0.00 0.00 5.03
2442 2618 3.712091 ATTCCTTAGTTACCTCGCTCG 57.288 47.619 0.00 0.00 0.00 5.03
2443 2619 8.358895 ACTTATTATTCCTTAGTTACCTCGCTC 58.641 37.037 0.00 0.00 0.00 5.03
2444 2620 8.247666 ACTTATTATTCCTTAGTTACCTCGCT 57.752 34.615 0.00 0.00 0.00 4.93
2504 2680 4.515432 GCTCTTTCAAAACACTACACGAC 58.485 43.478 0.00 0.00 0.00 4.34
2506 2682 3.311322 TGGCTCTTTCAAAACACTACACG 59.689 43.478 0.00 0.00 0.00 4.49
2517 2693 5.380043 AGATCTTTCTTGTGGCTCTTTCAA 58.620 37.500 0.00 0.00 0.00 2.69
2543 2719 3.244181 ACAAATGGATTGGAAGGTGCAAC 60.244 43.478 0.00 0.00 43.66 4.17
2548 2724 7.552050 TTATTTGACAAATGGATTGGAAGGT 57.448 32.000 21.21 0.00 43.66 3.50
2692 2869 8.417176 CACGTTTTGAAGCATACTATGTTTTTC 58.583 33.333 0.23 2.74 33.70 2.29
2700 2877 7.225145 ACACTTTACACGTTTTGAAGCATACTA 59.775 33.333 0.00 0.00 0.00 1.82
2731 2909 1.985159 TGGTCTAGTGTTTCCAGCCAT 59.015 47.619 0.00 0.00 0.00 4.40
2734 2912 3.498777 GTCTTTGGTCTAGTGTTTCCAGC 59.501 47.826 0.00 0.00 0.00 4.85
2893 3076 2.031769 TGTGCTTTCTGTCTTTCATGCG 60.032 45.455 0.00 0.00 0.00 4.73
2894 3077 3.631145 TGTGCTTTCTGTCTTTCATGC 57.369 42.857 0.00 0.00 0.00 4.06
2906 3089 3.568007 TGTTGGTACTTGGATGTGCTTTC 59.432 43.478 0.00 0.00 0.00 2.62
2924 3107 8.543774 ACTAGGCCTATATTATCCAAGATGTTG 58.456 37.037 14.30 0.00 0.00 3.33
2995 3180 9.541143 GAAAAGAGAGAAAGAGGATTATCGATT 57.459 33.333 1.71 0.00 0.00 3.34
3016 3201 6.856426 GGGACTTTTGAATGTTACTCGAAAAG 59.144 38.462 0.00 0.00 36.77 2.27
3017 3202 6.238814 GGGGACTTTTGAATGTTACTCGAAAA 60.239 38.462 0.00 0.00 0.00 2.29
3034 3224 3.557686 GCAAATGCAATTGAGGGGACTTT 60.558 43.478 18.66 0.00 40.68 2.66
3061 3251 3.646162 AGCATATCGGGAAAGGTGTGATA 59.354 43.478 0.00 0.00 0.00 2.15
3075 3265 7.425577 TTCCAATATTGACTTCAGCATATCG 57.574 36.000 17.23 0.00 0.00 2.92
3155 3345 0.804364 TTGTATGCAGGCTTCTTGCG 59.196 50.000 0.00 0.00 44.40 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.