Multiple sequence alignment - TraesCS5D01G171300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G171300 chr5D 100.000 3182 0 0 1 3182 268484776 268487957 0.000000e+00 5877.0
1 TraesCS5D01G171300 chr5D 95.000 80 4 0 2758 2837 268487463 268487542 3.330000e-25 126.0
2 TraesCS5D01G171300 chr5D 95.000 80 4 0 2688 2767 268487533 268487612 3.330000e-25 126.0
3 TraesCS5D01G171300 chr5A 91.673 2822 124 35 38 2764 355853557 355856362 0.000000e+00 3807.0
4 TraesCS5D01G171300 chr5B 94.961 516 19 3 784 1296 303922099 303922610 0.000000e+00 802.0
5 TraesCS5D01G171300 chr5B 94.595 333 15 2 2853 3182 533449520 533449188 2.190000e-141 512.0
6 TraesCS5D01G171300 chr5B 80.299 736 61 39 38 720 303921383 303922087 2.220000e-131 479.0
7 TraesCS5D01G171300 chr2D 95.726 351 10 4 2836 3182 184124115 184123766 7.710000e-156 560.0
8 TraesCS5D01G171300 chr2D 72.154 1142 218 65 1056 2156 596212973 596211891 4.070000e-64 255.0
9 TraesCS5D01G171300 chr2D 72.804 831 155 49 1056 1846 580455802 580456601 1.920000e-52 217.0
10 TraesCS5D01G171300 chr3D 96.460 339 7 3 2849 3182 165761827 165761489 3.590000e-154 555.0
11 TraesCS5D01G171300 chr1A 95.294 340 11 4 2848 3182 12261029 12260690 4.670000e-148 534.0
12 TraesCS5D01G171300 chr1A 94.721 341 12 4 2847 3182 330743018 330743357 2.810000e-145 525.0
13 TraesCS5D01G171300 chr2A 94.461 343 11 4 2846 3182 15903873 15903533 3.640000e-144 521.0
14 TraesCS5D01G171300 chr2A 72.374 952 191 49 1244 2156 729871037 729870119 5.310000e-58 235.0
15 TraesCS5D01G171300 chr2A 73.742 636 128 24 1244 1846 718265178 718265807 2.490000e-51 213.0
16 TraesCS5D01G171300 chr3A 94.864 331 12 3 2846 3171 719045502 719045832 2.190000e-141 512.0
17 TraesCS5D01G171300 chr3A 92.669 341 20 3 2847 3182 555058277 555057937 1.330000e-133 486.0
18 TraesCS5D01G171300 chr7B 92.690 342 19 5 2846 3182 462235447 462235107 3.690000e-134 488.0
19 TraesCS5D01G171300 chr2B 71.491 1140 229 63 1056 2156 724935517 724934435 1.920000e-52 217.0
20 TraesCS5D01G171300 chr2B 77.000 400 76 11 1458 1846 701359794 701360188 6.910000e-52 215.0
21 TraesCS5D01G171300 chr7D 80.198 101 17 3 2014 2112 548324122 548324023 4.400000e-09 73.1
22 TraesCS5D01G171300 chr1B 75.385 130 32 0 2023 2152 169013825 169013696 2.650000e-06 63.9
23 TraesCS5D01G171300 chr1D 74.615 130 33 0 2023 2152 110904501 110904372 1.230000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G171300 chr5D 268484776 268487957 3181 False 2043.0 5877 96.666667 1 3182 3 chr5D.!!$F1 3181
1 TraesCS5D01G171300 chr5A 355853557 355856362 2805 False 3807.0 3807 91.673000 38 2764 1 chr5A.!!$F1 2726
2 TraesCS5D01G171300 chr5B 303921383 303922610 1227 False 640.5 802 87.630000 38 1296 2 chr5B.!!$F1 1258
3 TraesCS5D01G171300 chr2D 596211891 596212973 1082 True 255.0 255 72.154000 1056 2156 1 chr2D.!!$R2 1100
4 TraesCS5D01G171300 chr2D 580455802 580456601 799 False 217.0 217 72.804000 1056 1846 1 chr2D.!!$F1 790
5 TraesCS5D01G171300 chr2A 729870119 729871037 918 True 235.0 235 72.374000 1244 2156 1 chr2A.!!$R2 912
6 TraesCS5D01G171300 chr2A 718265178 718265807 629 False 213.0 213 73.742000 1244 1846 1 chr2A.!!$F1 602
7 TraesCS5D01G171300 chr2B 724934435 724935517 1082 True 217.0 217 71.491000 1056 2156 1 chr2B.!!$R1 1100

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
925 981 0.1791 TCACCTCGCTAGCATTGCTC 60.179 55.0 15.81 0.37 40.44 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2902 3091 0.108992 TGCGTTGTATCGGTCTGTCC 60.109 55.0 0.0 0.0 0.0 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.469008 ACAACGATGACTCCAAGAACA 57.531 42.857 0.00 0.00 0.00 3.18
22 23 4.008074 ACAACGATGACTCCAAGAACAT 57.992 40.909 0.00 0.00 0.00 2.71
23 24 5.147330 ACAACGATGACTCCAAGAACATA 57.853 39.130 0.00 0.00 0.00 2.29
24 25 5.547465 ACAACGATGACTCCAAGAACATAA 58.453 37.500 0.00 0.00 0.00 1.90
25 26 5.639506 ACAACGATGACTCCAAGAACATAAG 59.360 40.000 0.00 0.00 0.00 1.73
26 27 4.184629 ACGATGACTCCAAGAACATAAGC 58.815 43.478 0.00 0.00 0.00 3.09
27 28 3.243877 CGATGACTCCAAGAACATAAGCG 59.756 47.826 0.00 0.00 0.00 4.68
28 29 2.972625 TGACTCCAAGAACATAAGCGG 58.027 47.619 0.00 0.00 0.00 5.52
29 30 1.666189 GACTCCAAGAACATAAGCGGC 59.334 52.381 0.00 0.00 0.00 6.53
30 31 0.652592 CTCCAAGAACATAAGCGGCG 59.347 55.000 0.51 0.51 0.00 6.46
31 32 0.742990 TCCAAGAACATAAGCGGCGG 60.743 55.000 9.78 0.00 0.00 6.13
32 33 1.024579 CCAAGAACATAAGCGGCGGT 61.025 55.000 5.44 5.44 0.00 5.68
33 34 0.373716 CAAGAACATAAGCGGCGGTC 59.626 55.000 13.68 0.00 0.00 4.79
34 35 1.082117 AAGAACATAAGCGGCGGTCG 61.082 55.000 13.68 6.83 42.76 4.79
35 36 1.808390 GAACATAAGCGGCGGTCGT 60.808 57.895 13.68 7.54 41.72 4.34
36 37 0.526096 GAACATAAGCGGCGGTCGTA 60.526 55.000 13.68 1.79 41.72 3.43
141 158 1.999024 CACTGCAACACAAAAACCACC 59.001 47.619 0.00 0.00 0.00 4.61
240 257 0.612744 TGTCAATGCCGAGGATCACA 59.387 50.000 0.00 0.00 33.17 3.58
241 258 1.009829 GTCAATGCCGAGGATCACAC 58.990 55.000 0.00 0.00 33.17 3.82
260 285 0.464735 CGGGAGTTGGGTTGAACACA 60.465 55.000 0.00 0.00 0.00 3.72
284 315 0.326048 ACTGCCAGCCTCCACTCTAT 60.326 55.000 0.00 0.00 0.00 1.98
321 353 1.591504 TAGCCACGATGACTGCGTCA 61.592 55.000 12.53 12.53 46.90 4.35
339 380 4.135153 CCTGAGAGGGCCGTCGTG 62.135 72.222 19.29 12.82 0.00 4.35
476 529 4.496336 AGGGAGGCGAGCCAATGC 62.496 66.667 17.18 1.47 38.92 3.56
615 669 4.504916 CAGAGTGCGCTCCCCTCG 62.505 72.222 23.37 3.95 42.59 4.63
636 690 3.134458 GGATCGGCTCAATTCCTAGTTG 58.866 50.000 0.00 0.00 0.00 3.16
637 691 2.024176 TCGGCTCAATTCCTAGTTGC 57.976 50.000 0.00 0.00 0.00 4.17
747 803 4.431131 CCAGGCGGCCAAGATGGT 62.431 66.667 23.09 0.00 40.46 3.55
781 837 1.687563 TCGAGCTGATCCACGGATTA 58.312 50.000 0.00 0.00 34.60 1.75
782 838 2.028876 TCGAGCTGATCCACGGATTAA 58.971 47.619 0.00 0.00 34.60 1.40
925 981 0.179100 TCACCTCGCTAGCATTGCTC 60.179 55.000 15.81 0.37 40.44 4.26
949 1005 4.530857 CCAAGGGCGGCTACTCGG 62.531 72.222 9.56 0.00 0.00 4.63
1059 1118 0.168128 GAAAGAAACCCACCATCGCG 59.832 55.000 0.00 0.00 0.00 5.87
1200 1265 2.964389 GCGAGGAAGATCGGCAGC 60.964 66.667 0.00 0.00 42.94 5.25
1401 1484 2.593148 TGTTTCATGGCCGCGTGT 60.593 55.556 4.92 0.00 0.00 4.49
1434 1517 0.687757 CCCTCCTTCGTCTCCATGGA 60.688 60.000 15.27 15.27 0.00 3.41
1887 1997 2.125753 GACTCCGACCAGCTGCAG 60.126 66.667 10.11 10.11 0.00 4.41
2088 2201 0.772124 TCCAGGTTCTCAAGGGGCTT 60.772 55.000 0.00 0.00 0.00 4.35
2091 2204 0.695347 AGGTTCTCAAGGGGCTTCTG 59.305 55.000 0.00 0.00 0.00 3.02
2152 2265 0.234884 CAAACTTCCGTGGTTCGCTC 59.765 55.000 0.00 0.00 38.35 5.03
2194 2314 2.548067 GGATTATAGCAGGTCACCGTGG 60.548 54.545 0.00 0.00 0.00 4.94
2226 2346 5.368816 ACCTAGGGTCCTGTAACCATAATTC 59.631 44.000 14.81 0.00 41.40 2.17
2228 2348 6.101296 CCTAGGGTCCTGTAACCATAATTCTT 59.899 42.308 0.00 0.00 41.40 2.52
2229 2349 7.291651 CCTAGGGTCCTGTAACCATAATTCTTA 59.708 40.741 0.00 0.00 41.40 2.10
2230 2350 7.138054 AGGGTCCTGTAACCATAATTCTTAG 57.862 40.000 0.00 0.00 41.40 2.18
2262 2383 5.087391 TGTAAACCATAGTTGTATGCGGA 57.913 39.130 0.00 0.00 35.97 5.54
2266 2387 2.365617 ACCATAGTTGTATGCGGAGAGG 59.634 50.000 0.00 0.00 35.56 3.69
2275 2396 4.459089 GCGGAGAGGTGAGGTGCC 62.459 72.222 0.00 0.00 0.00 5.01
2293 2414 1.738099 CTGTGCCTACAGCGACCAC 60.738 63.158 0.00 0.00 46.93 4.16
2306 2427 0.178068 CGACCACCCCCTCTTGTATG 59.822 60.000 0.00 0.00 0.00 2.39
2313 2434 2.620234 CCCTCTTGTATGGGGCTCA 58.380 57.895 0.00 0.00 39.76 4.26
2314 2435 0.181350 CCCTCTTGTATGGGGCTCAC 59.819 60.000 0.00 0.00 39.76 3.51
2315 2436 0.181350 CCTCTTGTATGGGGCTCACC 59.819 60.000 0.00 0.00 39.11 4.02
2339 2473 0.524862 GTGAGTTGCATGGGAGCTTG 59.475 55.000 0.00 0.00 34.99 4.01
2340 2474 0.111061 TGAGTTGCATGGGAGCTTGT 59.889 50.000 0.00 0.00 34.99 3.16
2341 2475 0.524862 GAGTTGCATGGGAGCTTGTG 59.475 55.000 0.00 0.00 34.99 3.33
2342 2476 1.080298 GTTGCATGGGAGCTTGTGC 60.080 57.895 0.00 0.00 38.05 4.57
2365 2499 8.870879 GTGCTAATTACTACTTGTTTCCTAGTG 58.129 37.037 0.00 0.00 0.00 2.74
2373 2507 1.729586 TGTTTCCTAGTGGCAGGAGT 58.270 50.000 0.00 0.00 45.45 3.85
2378 2512 1.007238 TCCTAGTGGCAGGAGTAGCTT 59.993 52.381 0.00 0.00 39.89 3.74
2379 2513 2.243994 TCCTAGTGGCAGGAGTAGCTTA 59.756 50.000 0.00 0.00 39.89 3.09
2380 2514 2.625790 CCTAGTGGCAGGAGTAGCTTAG 59.374 54.545 0.00 0.00 38.00 2.18
2382 2516 2.821437 AGTGGCAGGAGTAGCTTAGAA 58.179 47.619 0.00 0.00 0.00 2.10
2384 2518 1.831736 TGGCAGGAGTAGCTTAGAACC 59.168 52.381 0.00 0.00 0.00 3.62
2387 2521 2.159028 GCAGGAGTAGCTTAGAACCTGG 60.159 54.545 19.08 0.00 43.22 4.45
2388 2522 2.432510 CAGGAGTAGCTTAGAACCTGGG 59.567 54.545 13.51 0.00 40.50 4.45
2390 2524 2.696187 GGAGTAGCTTAGAACCTGGGAG 59.304 54.545 0.00 0.00 0.00 4.30
2391 2525 2.101750 GAGTAGCTTAGAACCTGGGAGC 59.898 54.545 0.00 0.00 0.00 4.70
2392 2526 1.831736 GTAGCTTAGAACCTGGGAGCA 59.168 52.381 0.00 0.00 35.86 4.26
2413 2557 4.620609 GCAGCTGTAATGTATGATCTCTCG 59.379 45.833 16.64 0.00 0.00 4.04
2416 2560 5.532779 AGCTGTAATGTATGATCTCTCGTGA 59.467 40.000 0.00 0.00 0.00 4.35
2434 2578 8.502105 TCTCGTGAGATTTATAAGACTACACA 57.498 34.615 0.00 0.00 40.84 3.72
2450 2594 6.428159 AGACTACACATTGTTCATCCTTTGAC 59.572 38.462 0.00 0.00 32.84 3.18
2455 2599 3.304911 TTGTTCATCCTTTGACCCACA 57.695 42.857 0.00 0.00 32.84 4.17
2483 2627 3.681593 TGGTACTTTGCCTACAATCCAC 58.318 45.455 0.00 0.00 35.21 4.02
2491 2635 6.151144 ACTTTGCCTACAATCCACTTTCATAC 59.849 38.462 0.00 0.00 35.21 2.39
2512 2658 1.425066 TCTGATGGAGTTGTTGGCCTT 59.575 47.619 3.32 0.00 0.00 4.35
2533 2679 7.328737 GCCTTTAAGGTCTCAAGTTACATCTA 58.671 38.462 13.03 0.00 37.80 1.98
2549 2695 8.739972 AGTTACATCTAATGCTTGGTTTTAAGG 58.260 33.333 0.00 0.00 0.00 2.69
2551 2697 5.716703 ACATCTAATGCTTGGTTTTAAGGCT 59.283 36.000 0.00 0.00 0.00 4.58
2552 2698 5.643379 TCTAATGCTTGGTTTTAAGGCTG 57.357 39.130 0.00 0.00 0.00 4.85
2553 2699 2.749280 ATGCTTGGTTTTAAGGCTGC 57.251 45.000 0.00 0.00 0.00 5.25
2554 2700 1.703411 TGCTTGGTTTTAAGGCTGCT 58.297 45.000 0.00 0.00 0.00 4.24
2555 2701 1.613437 TGCTTGGTTTTAAGGCTGCTC 59.387 47.619 0.00 0.00 0.00 4.26
2568 2739 3.282885 AGGCTGCTCTTGTAAATAAGGC 58.717 45.455 0.00 0.00 0.00 4.35
2582 2753 3.719173 ATAAGGCTGCTCGTCTCTTAC 57.281 47.619 0.00 0.00 0.00 2.34
2608 2779 4.708177 TGCCAGTATCTCCTAGAATTTGC 58.292 43.478 0.00 0.00 0.00 3.68
2652 2823 6.183360 ACAGTGTGAGTTGTTTAACTGAATGG 60.183 38.462 7.56 0.00 46.79 3.16
2677 2866 4.405358 ACTTTTCCAATTCTGCAAACCTGA 59.595 37.500 0.00 0.00 0.00 3.86
2694 2883 3.519510 ACCTGACACATAACAGCCTACAT 59.480 43.478 0.00 0.00 33.40 2.29
2695 2884 4.714802 ACCTGACACATAACAGCCTACATA 59.285 41.667 0.00 0.00 33.40 2.29
2697 2886 5.523916 CCTGACACATAACAGCCTACATAAC 59.476 44.000 0.00 0.00 33.40 1.89
2700 2889 6.071051 TGACACATAACAGCCTACATAACTGA 60.071 38.462 0.00 0.00 35.38 3.41
2731 2920 8.879342 TGGTTTGTCCACATTTTGTAATTTAG 57.121 30.769 0.00 0.00 41.93 1.85
2732 2921 7.439655 TGGTTTGTCCACATTTTGTAATTTAGC 59.560 33.333 0.00 0.00 41.93 3.09
2733 2922 7.439655 GGTTTGTCCACATTTTGTAATTTAGCA 59.560 33.333 0.00 0.00 35.97 3.49
2734 2923 8.821894 GTTTGTCCACATTTTGTAATTTAGCAA 58.178 29.630 0.00 0.00 0.00 3.91
2735 2924 9.553064 TTTGTCCACATTTTGTAATTTAGCAAT 57.447 25.926 0.00 0.00 0.00 3.56
2736 2925 8.755696 TGTCCACATTTTGTAATTTAGCAATC 57.244 30.769 0.00 0.00 0.00 2.67
2737 2926 7.816995 TGTCCACATTTTGTAATTTAGCAATCC 59.183 33.333 0.00 0.00 0.00 3.01
2738 2927 8.034804 GTCCACATTTTGTAATTTAGCAATCCT 58.965 33.333 0.00 0.00 0.00 3.24
2739 2928 8.034215 TCCACATTTTGTAATTTAGCAATCCTG 58.966 33.333 0.00 0.00 0.00 3.86
2740 2929 8.034215 CCACATTTTGTAATTTAGCAATCCTGA 58.966 33.333 0.00 0.00 0.00 3.86
2741 2930 9.590451 CACATTTTGTAATTTAGCAATCCTGAT 57.410 29.630 0.00 0.00 0.00 2.90
2742 2931 9.807649 ACATTTTGTAATTTAGCAATCCTGATC 57.192 29.630 0.00 0.00 0.00 2.92
2743 2932 9.252962 CATTTTGTAATTTAGCAATCCTGATCC 57.747 33.333 0.00 0.00 0.00 3.36
2744 2933 7.953005 TTTGTAATTTAGCAATCCTGATCCA 57.047 32.000 0.00 0.00 0.00 3.41
2745 2934 7.572523 TTGTAATTTAGCAATCCTGATCCAG 57.427 36.000 0.00 0.00 0.00 3.86
2746 2935 6.662755 TGTAATTTAGCAATCCTGATCCAGT 58.337 36.000 0.00 0.00 0.00 4.00
2747 2936 7.118723 TGTAATTTAGCAATCCTGATCCAGTT 58.881 34.615 0.00 0.00 0.00 3.16
2748 2937 8.271458 TGTAATTTAGCAATCCTGATCCAGTTA 58.729 33.333 0.00 0.00 0.00 2.24
2749 2938 9.289782 GTAATTTAGCAATCCTGATCCAGTTAT 57.710 33.333 0.00 0.00 0.00 1.89
2750 2939 8.773033 AATTTAGCAATCCTGATCCAGTTATT 57.227 30.769 0.00 0.00 0.00 1.40
2751 2940 9.866655 AATTTAGCAATCCTGATCCAGTTATTA 57.133 29.630 0.00 0.00 0.00 0.98
2752 2941 8.908786 TTTAGCAATCCTGATCCAGTTATTAG 57.091 34.615 0.00 0.00 0.00 1.73
2753 2942 5.312079 AGCAATCCTGATCCAGTTATTAGC 58.688 41.667 0.00 0.00 0.00 3.09
2754 2943 4.457257 GCAATCCTGATCCAGTTATTAGCC 59.543 45.833 0.00 0.00 0.00 3.93
2755 2944 4.917906 ATCCTGATCCAGTTATTAGCCC 57.082 45.455 0.00 0.00 0.00 5.19
2756 2945 3.941629 TCCTGATCCAGTTATTAGCCCT 58.058 45.455 0.00 0.00 0.00 5.19
2757 2946 3.648067 TCCTGATCCAGTTATTAGCCCTG 59.352 47.826 0.00 0.00 0.00 4.45
2758 2947 3.406764 CTGATCCAGTTATTAGCCCTGC 58.593 50.000 0.00 0.00 0.00 4.85
2759 2948 2.106511 TGATCCAGTTATTAGCCCTGCC 59.893 50.000 0.00 0.00 0.00 4.85
2760 2949 1.590591 TCCAGTTATTAGCCCTGCCA 58.409 50.000 0.00 0.00 0.00 4.92
2761 2950 1.919654 TCCAGTTATTAGCCCTGCCAA 59.080 47.619 0.00 0.00 0.00 4.52
2762 2951 2.024414 CCAGTTATTAGCCCTGCCAAC 58.976 52.381 0.00 0.00 0.00 3.77
2763 2952 2.620367 CCAGTTATTAGCCCTGCCAACA 60.620 50.000 0.00 0.00 0.00 3.33
2764 2953 3.088532 CAGTTATTAGCCCTGCCAACAA 58.911 45.455 0.00 0.00 0.00 2.83
2765 2954 3.701040 CAGTTATTAGCCCTGCCAACAAT 59.299 43.478 0.00 0.00 0.00 2.71
2766 2955 4.887071 CAGTTATTAGCCCTGCCAACAATA 59.113 41.667 0.00 0.00 0.00 1.90
2767 2956 4.887655 AGTTATTAGCCCTGCCAACAATAC 59.112 41.667 0.00 0.00 0.00 1.89
2768 2957 3.669939 ATTAGCCCTGCCAACAATACT 57.330 42.857 0.00 0.00 0.00 2.12
2769 2958 2.418368 TAGCCCTGCCAACAATACTG 57.582 50.000 0.00 0.00 0.00 2.74
2770 2959 0.698238 AGCCCTGCCAACAATACTGA 59.302 50.000 0.00 0.00 0.00 3.41
2771 2960 1.285962 AGCCCTGCCAACAATACTGAT 59.714 47.619 0.00 0.00 0.00 2.90
2772 2961 1.678101 GCCCTGCCAACAATACTGATC 59.322 52.381 0.00 0.00 0.00 2.92
2773 2962 2.301346 CCCTGCCAACAATACTGATCC 58.699 52.381 0.00 0.00 0.00 3.36
2774 2963 2.301346 CCTGCCAACAATACTGATCCC 58.699 52.381 0.00 0.00 0.00 3.85
2775 2964 2.357050 CCTGCCAACAATACTGATCCCA 60.357 50.000 0.00 0.00 0.00 4.37
2776 2965 3.559069 CTGCCAACAATACTGATCCCAT 58.441 45.455 0.00 0.00 0.00 4.00
2777 2966 3.289836 TGCCAACAATACTGATCCCATG 58.710 45.455 0.00 0.00 0.00 3.66
2778 2967 2.624838 GCCAACAATACTGATCCCATGG 59.375 50.000 4.14 4.14 0.00 3.66
2779 2968 3.902218 CCAACAATACTGATCCCATGGT 58.098 45.455 11.73 0.00 0.00 3.55
2780 2969 4.280819 CCAACAATACTGATCCCATGGTT 58.719 43.478 11.73 0.00 0.00 3.67
2781 2970 4.711355 CCAACAATACTGATCCCATGGTTT 59.289 41.667 11.73 0.00 0.00 3.27
2782 2971 5.394443 CCAACAATACTGATCCCATGGTTTG 60.394 44.000 11.73 0.00 0.00 2.93
2783 2972 4.934356 ACAATACTGATCCCATGGTTTGT 58.066 39.130 11.73 4.82 0.00 2.83
2784 2973 4.949856 ACAATACTGATCCCATGGTTTGTC 59.050 41.667 11.73 3.62 0.00 3.18
2785 2974 2.514458 ACTGATCCCATGGTTTGTCC 57.486 50.000 11.73 0.00 0.00 4.02
2815 3004 5.674525 TGTAATTTAGCACTCCTGATCCAG 58.325 41.667 0.00 0.00 0.00 3.86
2834 3023 3.088532 CAGTTATTAGCCCTGCCAACAA 58.911 45.455 0.00 0.00 0.00 2.83
2835 3024 3.701040 CAGTTATTAGCCCTGCCAACAAT 59.299 43.478 0.00 0.00 0.00 2.71
2836 3025 4.887071 CAGTTATTAGCCCTGCCAACAATA 59.113 41.667 0.00 0.00 0.00 1.90
2837 3026 5.536161 CAGTTATTAGCCCTGCCAACAATAT 59.464 40.000 0.00 0.00 0.00 1.28
2838 3027 6.714810 CAGTTATTAGCCCTGCCAACAATATA 59.285 38.462 0.00 0.00 0.00 0.86
2839 3028 7.394359 CAGTTATTAGCCCTGCCAACAATATAT 59.606 37.037 0.00 0.00 0.00 0.86
2840 3029 7.394359 AGTTATTAGCCCTGCCAACAATATATG 59.606 37.037 0.00 0.00 0.00 1.78
2841 3030 3.600448 AGCCCTGCCAACAATATATGT 57.400 42.857 0.00 0.00 46.82 2.29
2865 3054 4.669206 TTTTACCGAAAAAGGTTTCCCC 57.331 40.909 0.00 0.00 43.00 4.81
2866 3055 1.894881 TACCGAAAAAGGTTTCCCCG 58.105 50.000 0.00 0.00 43.00 5.73
2867 3056 1.287815 CCGAAAAAGGTTTCCCCGC 59.712 57.895 0.00 0.00 40.13 6.13
2868 3057 1.176619 CCGAAAAAGGTTTCCCCGCT 61.177 55.000 0.00 0.00 40.13 5.52
2869 3058 0.671796 CGAAAAAGGTTTCCCCGCTT 59.328 50.000 0.00 0.00 40.13 4.68
2870 3059 1.067974 CGAAAAAGGTTTCCCCGCTTT 59.932 47.619 0.00 0.00 40.13 3.51
2871 3060 2.293955 CGAAAAAGGTTTCCCCGCTTTA 59.706 45.455 0.00 0.00 40.13 1.85
2872 3061 3.057104 CGAAAAAGGTTTCCCCGCTTTAT 60.057 43.478 0.00 0.00 40.13 1.40
2873 3062 4.156373 CGAAAAAGGTTTCCCCGCTTTATA 59.844 41.667 0.00 0.00 40.13 0.98
2874 3063 5.163591 CGAAAAAGGTTTCCCCGCTTTATAT 60.164 40.000 0.00 0.00 40.13 0.86
2875 3064 6.614694 AAAAAGGTTTCCCCGCTTTATATT 57.385 33.333 0.00 0.00 38.74 1.28
2876 3065 7.415429 CGAAAAAGGTTTCCCCGCTTTATATTA 60.415 37.037 0.00 0.00 40.13 0.98
2877 3066 7.907841 AAAAGGTTTCCCCGCTTTATATTAT 57.092 32.000 0.00 0.00 38.74 1.28
2878 3067 8.999905 AAAAGGTTTCCCCGCTTTATATTATA 57.000 30.769 0.00 0.00 38.74 0.98
2879 3068 8.999905 AAAGGTTTCCCCGCTTTATATTATAA 57.000 30.769 0.00 0.00 38.74 0.98
2880 3069 8.999905 AAGGTTTCCCCGCTTTATATTATAAA 57.000 30.769 8.26 8.26 38.74 1.40
2881 3070 8.631480 AGGTTTCCCCGCTTTATATTATAAAG 57.369 34.615 23.28 23.28 38.74 1.85
2898 3087 5.981088 ATAAAGCCAACATCATCACAACA 57.019 34.783 0.00 0.00 0.00 3.33
2899 3088 4.877378 AAAGCCAACATCATCACAACAT 57.123 36.364 0.00 0.00 0.00 2.71
2900 3089 4.445452 AAGCCAACATCATCACAACATC 57.555 40.909 0.00 0.00 0.00 3.06
2901 3090 2.756760 AGCCAACATCATCACAACATCC 59.243 45.455 0.00 0.00 0.00 3.51
2902 3091 2.478370 GCCAACATCATCACAACATCCG 60.478 50.000 0.00 0.00 0.00 4.18
2903 3092 2.097954 CCAACATCATCACAACATCCGG 59.902 50.000 0.00 0.00 0.00 5.14
2904 3093 3.009026 CAACATCATCACAACATCCGGA 58.991 45.455 6.61 6.61 0.00 5.14
2905 3094 2.632377 ACATCATCACAACATCCGGAC 58.368 47.619 6.12 0.00 0.00 4.79
2906 3095 2.027285 ACATCATCACAACATCCGGACA 60.027 45.455 6.12 0.00 0.00 4.02
2907 3096 2.385013 TCATCACAACATCCGGACAG 57.615 50.000 6.12 4.98 0.00 3.51
2908 3097 1.899142 TCATCACAACATCCGGACAGA 59.101 47.619 6.12 0.00 0.00 3.41
2909 3098 2.002586 CATCACAACATCCGGACAGAC 58.997 52.381 6.12 0.00 0.00 3.51
2910 3099 0.320374 TCACAACATCCGGACAGACC 59.680 55.000 6.12 0.00 0.00 3.85
2920 3109 2.662150 GGACAGACCGATACAACGC 58.338 57.895 0.00 0.00 0.00 4.84
2921 3110 0.108992 GGACAGACCGATACAACGCA 60.109 55.000 0.00 0.00 0.00 5.24
2922 3111 0.989890 GACAGACCGATACAACGCAC 59.010 55.000 0.00 0.00 0.00 5.34
2923 3112 0.315886 ACAGACCGATACAACGCACA 59.684 50.000 0.00 0.00 0.00 4.57
2924 3113 0.713883 CAGACCGATACAACGCACAC 59.286 55.000 0.00 0.00 0.00 3.82
2925 3114 0.389426 AGACCGATACAACGCACACC 60.389 55.000 0.00 0.00 0.00 4.16
2926 3115 0.668096 GACCGATACAACGCACACCA 60.668 55.000 0.00 0.00 0.00 4.17
2927 3116 0.947180 ACCGATACAACGCACACCAC 60.947 55.000 0.00 0.00 0.00 4.16
2928 3117 1.632046 CCGATACAACGCACACCACC 61.632 60.000 0.00 0.00 0.00 4.61
2929 3118 0.946700 CGATACAACGCACACCACCA 60.947 55.000 0.00 0.00 0.00 4.17
2930 3119 0.515564 GATACAACGCACACCACCAC 59.484 55.000 0.00 0.00 0.00 4.16
2931 3120 0.887387 ATACAACGCACACCACCACC 60.887 55.000 0.00 0.00 0.00 4.61
2932 3121 3.947841 CAACGCACACCACCACCG 61.948 66.667 0.00 0.00 0.00 4.94
2937 3126 3.582120 CACACCACCACCGCACAC 61.582 66.667 0.00 0.00 0.00 3.82
2938 3127 4.102815 ACACCACCACCGCACACA 62.103 61.111 0.00 0.00 0.00 3.72
2939 3128 2.826287 CACCACCACCGCACACAA 60.826 61.111 0.00 0.00 0.00 3.33
2940 3129 2.826738 ACCACCACCGCACACAAC 60.827 61.111 0.00 0.00 0.00 3.32
2941 3130 2.826287 CCACCACCGCACACAACA 60.826 61.111 0.00 0.00 0.00 3.33
2942 3131 2.407210 CACCACCGCACACAACAC 59.593 61.111 0.00 0.00 0.00 3.32
2943 3132 2.045829 ACCACCGCACACAACACA 60.046 55.556 0.00 0.00 0.00 3.72
2944 3133 2.403378 ACCACCGCACACAACACAC 61.403 57.895 0.00 0.00 0.00 3.82
2945 3134 2.402572 CCACCGCACACAACACACA 61.403 57.895 0.00 0.00 0.00 3.72
2946 3135 1.723608 CCACCGCACACAACACACAT 61.724 55.000 0.00 0.00 0.00 3.21
2947 3136 0.316937 CACCGCACACAACACACATC 60.317 55.000 0.00 0.00 0.00 3.06
2948 3137 1.282570 CCGCACACAACACACATCC 59.717 57.895 0.00 0.00 0.00 3.51
2949 3138 1.443322 CCGCACACAACACACATCCA 61.443 55.000 0.00 0.00 0.00 3.41
2950 3139 0.380024 CGCACACAACACACATCCAA 59.620 50.000 0.00 0.00 0.00 3.53
2951 3140 1.597690 CGCACACAACACACATCCAAG 60.598 52.381 0.00 0.00 0.00 3.61
2952 3141 1.675483 GCACACAACACACATCCAAGA 59.325 47.619 0.00 0.00 0.00 3.02
2953 3142 2.541588 GCACACAACACACATCCAAGAC 60.542 50.000 0.00 0.00 0.00 3.01
2954 3143 2.682352 CACACAACACACATCCAAGACA 59.318 45.455 0.00 0.00 0.00 3.41
2955 3144 3.316029 CACACAACACACATCCAAGACAT 59.684 43.478 0.00 0.00 0.00 3.06
2956 3145 3.316029 ACACAACACACATCCAAGACATG 59.684 43.478 0.00 0.00 0.00 3.21
2957 3146 3.565063 CACAACACACATCCAAGACATGA 59.435 43.478 0.00 0.00 0.00 3.07
2958 3147 4.216902 CACAACACACATCCAAGACATGAT 59.783 41.667 0.00 0.00 0.00 2.45
2959 3148 5.412286 CACAACACACATCCAAGACATGATA 59.588 40.000 0.00 0.00 0.00 2.15
2960 3149 5.412594 ACAACACACATCCAAGACATGATAC 59.587 40.000 0.00 0.00 0.00 2.24
2961 3150 5.164620 ACACACATCCAAGACATGATACA 57.835 39.130 0.00 0.00 0.00 2.29
2962 3151 5.559770 ACACACATCCAAGACATGATACAA 58.440 37.500 0.00 0.00 0.00 2.41
2963 3152 6.003326 ACACACATCCAAGACATGATACAAA 58.997 36.000 0.00 0.00 0.00 2.83
2964 3153 6.149973 ACACACATCCAAGACATGATACAAAG 59.850 38.462 0.00 0.00 0.00 2.77
2965 3154 5.649395 ACACATCCAAGACATGATACAAAGG 59.351 40.000 0.00 0.00 0.00 3.11
2966 3155 5.649395 CACATCCAAGACATGATACAAAGGT 59.351 40.000 0.00 0.00 0.00 3.50
2967 3156 5.649395 ACATCCAAGACATGATACAAAGGTG 59.351 40.000 0.00 0.00 0.00 4.00
2968 3157 5.241403 TCCAAGACATGATACAAAGGTGT 57.759 39.130 0.00 0.00 42.09 4.16
2969 3158 5.245531 TCCAAGACATGATACAAAGGTGTC 58.754 41.667 0.00 0.00 39.30 3.67
2970 3159 4.093408 CCAAGACATGATACAAAGGTGTCG 59.907 45.833 0.00 0.00 42.87 4.35
2971 3160 4.801330 AGACATGATACAAAGGTGTCGA 57.199 40.909 0.00 0.00 42.87 4.20
2972 3161 4.748892 AGACATGATACAAAGGTGTCGAG 58.251 43.478 0.00 0.00 42.87 4.04
2973 3162 3.262420 ACATGATACAAAGGTGTCGAGC 58.738 45.455 0.00 0.00 37.92 5.03
2974 3163 3.261580 CATGATACAAAGGTGTCGAGCA 58.738 45.455 0.00 0.00 37.92 4.26
2975 3164 2.683968 TGATACAAAGGTGTCGAGCAC 58.316 47.619 8.94 8.94 46.97 4.40
2982 3171 4.736896 GTGTCGAGCACCGTCCCC 62.737 72.222 6.82 0.00 42.10 4.81
2986 3175 4.096003 CGAGCACCGTCCCCCAAT 62.096 66.667 0.00 0.00 0.00 3.16
2987 3176 2.438434 GAGCACCGTCCCCCAATG 60.438 66.667 0.00 0.00 0.00 2.82
2988 3177 4.740822 AGCACCGTCCCCCAATGC 62.741 66.667 0.00 0.00 36.52 3.56
2990 3179 4.358841 CACCGTCCCCCAATGCCA 62.359 66.667 0.00 0.00 0.00 4.92
2991 3180 4.360405 ACCGTCCCCCAATGCCAC 62.360 66.667 0.00 0.00 0.00 5.01
2998 3187 4.067913 CCCAATGCCACCGCCAAC 62.068 66.667 0.00 0.00 0.00 3.77
2999 3188 4.067913 CCAATGCCACCGCCAACC 62.068 66.667 0.00 0.00 0.00 3.77
3000 3189 3.301554 CAATGCCACCGCCAACCA 61.302 61.111 0.00 0.00 0.00 3.67
3001 3190 2.522923 AATGCCACCGCCAACCAA 60.523 55.556 0.00 0.00 0.00 3.67
3002 3191 2.573083 AATGCCACCGCCAACCAAG 61.573 57.895 0.00 0.00 0.00 3.61
3005 3194 2.033448 CCACCGCCAACCAAGCTA 59.967 61.111 0.00 0.00 0.00 3.32
3006 3195 1.602323 CCACCGCCAACCAAGCTAA 60.602 57.895 0.00 0.00 0.00 3.09
3007 3196 1.579429 CACCGCCAACCAAGCTAAC 59.421 57.895 0.00 0.00 0.00 2.34
3008 3197 0.889186 CACCGCCAACCAAGCTAACT 60.889 55.000 0.00 0.00 0.00 2.24
3009 3198 0.688487 ACCGCCAACCAAGCTAACTA 59.312 50.000 0.00 0.00 0.00 2.24
3010 3199 1.072648 ACCGCCAACCAAGCTAACTAA 59.927 47.619 0.00 0.00 0.00 2.24
3011 3200 2.156098 CCGCCAACCAAGCTAACTAAA 58.844 47.619 0.00 0.00 0.00 1.85
3012 3201 2.554893 CCGCCAACCAAGCTAACTAAAA 59.445 45.455 0.00 0.00 0.00 1.52
3013 3202 3.004944 CCGCCAACCAAGCTAACTAAAAA 59.995 43.478 0.00 0.00 0.00 1.94
3014 3203 4.321675 CCGCCAACCAAGCTAACTAAAAAT 60.322 41.667 0.00 0.00 0.00 1.82
3015 3204 4.621034 CGCCAACCAAGCTAACTAAAAATG 59.379 41.667 0.00 0.00 0.00 2.32
3016 3205 5.563867 CGCCAACCAAGCTAACTAAAAATGA 60.564 40.000 0.00 0.00 0.00 2.57
3017 3206 5.633601 GCCAACCAAGCTAACTAAAAATGAC 59.366 40.000 0.00 0.00 0.00 3.06
3018 3207 5.856455 CCAACCAAGCTAACTAAAAATGACG 59.144 40.000 0.00 0.00 0.00 4.35
3019 3208 6.293735 CCAACCAAGCTAACTAAAAATGACGA 60.294 38.462 0.00 0.00 0.00 4.20
3020 3209 6.870971 ACCAAGCTAACTAAAAATGACGAA 57.129 33.333 0.00 0.00 0.00 3.85
3021 3210 7.448748 ACCAAGCTAACTAAAAATGACGAAT 57.551 32.000 0.00 0.00 0.00 3.34
3022 3211 7.305474 ACCAAGCTAACTAAAAATGACGAATG 58.695 34.615 0.00 0.00 0.00 2.67
3023 3212 7.174253 ACCAAGCTAACTAAAAATGACGAATGA 59.826 33.333 0.00 0.00 0.00 2.57
3024 3213 8.184192 CCAAGCTAACTAAAAATGACGAATGAT 58.816 33.333 0.00 0.00 0.00 2.45
3028 3217 9.434559 GCTAACTAAAAATGACGAATGATAACC 57.565 33.333 0.00 0.00 0.00 2.85
3029 3218 9.632969 CTAACTAAAAATGACGAATGATAACCG 57.367 33.333 0.00 0.00 0.00 4.44
3030 3219 6.483687 ACTAAAAATGACGAATGATAACCGC 58.516 36.000 0.00 0.00 0.00 5.68
3031 3220 5.560966 AAAAATGACGAATGATAACCGCT 57.439 34.783 0.00 0.00 0.00 5.52
3032 3221 5.560966 AAAATGACGAATGATAACCGCTT 57.439 34.783 0.00 0.00 0.00 4.68
3033 3222 4.536364 AATGACGAATGATAACCGCTTG 57.464 40.909 0.00 0.00 0.00 4.01
3034 3223 3.239587 TGACGAATGATAACCGCTTGA 57.760 42.857 0.00 0.00 0.00 3.02
3035 3224 3.591023 TGACGAATGATAACCGCTTGAA 58.409 40.909 0.00 0.00 0.00 2.69
3036 3225 3.616821 TGACGAATGATAACCGCTTGAAG 59.383 43.478 0.00 0.00 0.00 3.02
3037 3226 3.857052 ACGAATGATAACCGCTTGAAGA 58.143 40.909 0.00 0.00 0.00 2.87
3038 3227 3.865745 ACGAATGATAACCGCTTGAAGAG 59.134 43.478 0.00 0.00 0.00 2.85
3039 3228 3.246226 CGAATGATAACCGCTTGAAGAGG 59.754 47.826 13.62 13.62 41.31 3.69
3040 3229 4.442706 GAATGATAACCGCTTGAAGAGGA 58.557 43.478 21.89 0.00 37.36 3.71
3041 3230 3.247006 TGATAACCGCTTGAAGAGGAC 57.753 47.619 21.89 9.86 37.36 3.85
3042 3231 2.194271 GATAACCGCTTGAAGAGGACG 58.806 52.381 21.89 2.40 37.36 4.79
3044 3233 1.469335 AACCGCTTGAAGAGGACGGA 61.469 55.000 21.89 0.00 46.71 4.69
3045 3234 1.153745 CCGCTTGAAGAGGACGGAG 60.154 63.158 9.53 0.00 46.71 4.63
3046 3235 1.595993 CCGCTTGAAGAGGACGGAGA 61.596 60.000 9.53 0.00 46.71 3.71
3047 3236 0.456995 CGCTTGAAGAGGACGGAGAC 60.457 60.000 0.00 0.00 0.00 3.36
3048 3237 0.108567 GCTTGAAGAGGACGGAGACC 60.109 60.000 0.00 0.00 44.20 3.85
3062 3251 1.797025 GAGACCTCCACCAAGAAACG 58.203 55.000 0.00 0.00 0.00 3.60
3063 3252 1.343465 GAGACCTCCACCAAGAAACGA 59.657 52.381 0.00 0.00 0.00 3.85
3064 3253 1.344763 AGACCTCCACCAAGAAACGAG 59.655 52.381 0.00 0.00 0.00 4.18
3065 3254 0.396811 ACCTCCACCAAGAAACGAGG 59.603 55.000 0.00 0.00 44.74 4.63
3066 3255 0.685097 CCTCCACCAAGAAACGAGGA 59.315 55.000 0.00 0.00 42.33 3.71
3067 3256 1.338200 CCTCCACCAAGAAACGAGGAG 60.338 57.143 0.00 0.00 42.33 3.69
3068 3257 0.685097 TCCACCAAGAAACGAGGAGG 59.315 55.000 0.00 0.00 34.86 4.30
3069 3258 0.321653 CCACCAAGAAACGAGGAGGG 60.322 60.000 0.00 0.00 30.55 4.30
3070 3259 0.321653 CACCAAGAAACGAGGAGGGG 60.322 60.000 0.00 0.00 0.00 4.79
3071 3260 1.299976 CCAAGAAACGAGGAGGGGG 59.700 63.158 0.00 0.00 0.00 5.40
3087 3276 2.867109 GGGGGATATGGTCATGACAG 57.133 55.000 26.47 0.00 0.00 3.51
3088 3277 2.338809 GGGGGATATGGTCATGACAGA 58.661 52.381 26.47 13.22 0.00 3.41
3089 3278 2.304180 GGGGGATATGGTCATGACAGAG 59.696 54.545 26.47 0.00 0.00 3.35
3090 3279 2.289945 GGGGATATGGTCATGACAGAGC 60.290 54.545 26.47 13.34 36.59 4.09
3094 3283 1.985614 TGGTCATGACAGAGCAGGG 59.014 57.895 26.47 0.00 40.73 4.45
3095 3284 0.545071 TGGTCATGACAGAGCAGGGA 60.545 55.000 26.47 0.00 40.73 4.20
3096 3285 0.107945 GGTCATGACAGAGCAGGGAC 60.108 60.000 26.47 2.06 36.11 4.46
3097 3286 0.901124 GTCATGACAGAGCAGGGACT 59.099 55.000 21.07 0.00 43.88 3.85
3098 3287 1.134848 GTCATGACAGAGCAGGGACTC 60.135 57.143 21.07 0.00 34.60 3.36
3099 3288 0.177604 CATGACAGAGCAGGGACTCC 59.822 60.000 0.00 0.00 34.60 3.85
3100 3289 0.252421 ATGACAGAGCAGGGACTCCA 60.252 55.000 0.00 0.00 34.60 3.86
3101 3290 0.471780 TGACAGAGCAGGGACTCCAA 60.472 55.000 0.00 0.00 34.60 3.53
3102 3291 0.248843 GACAGAGCAGGGACTCCAAG 59.751 60.000 0.00 0.00 34.60 3.61
3103 3292 0.178921 ACAGAGCAGGGACTCCAAGA 60.179 55.000 0.00 0.00 34.60 3.02
3104 3293 0.248843 CAGAGCAGGGACTCCAAGAC 59.751 60.000 0.00 0.00 34.60 3.01
3105 3294 0.178921 AGAGCAGGGACTCCAAGACA 60.179 55.000 0.00 0.00 34.60 3.41
3106 3295 0.248843 GAGCAGGGACTCCAAGACAG 59.751 60.000 0.00 0.00 34.60 3.51
3107 3296 0.472734 AGCAGGGACTCCAAGACAGT 60.473 55.000 0.00 0.00 34.60 3.55
3108 3297 0.321122 GCAGGGACTCCAAGACAGTG 60.321 60.000 0.00 0.00 34.60 3.66
3109 3298 0.321122 CAGGGACTCCAAGACAGTGC 60.321 60.000 0.00 0.00 34.60 4.40
3110 3299 1.003233 GGGACTCCAAGACAGTGCC 60.003 63.158 0.00 0.00 44.17 5.01
3111 3300 1.484444 GGGACTCCAAGACAGTGCCT 61.484 60.000 3.31 0.00 46.29 4.75
3112 3301 0.036858 GGACTCCAAGACAGTGCCTC 60.037 60.000 0.00 0.00 0.00 4.70
3113 3302 0.036858 GACTCCAAGACAGTGCCTCC 60.037 60.000 0.00 0.00 0.00 4.30
3114 3303 0.472734 ACTCCAAGACAGTGCCTCCT 60.473 55.000 0.00 0.00 0.00 3.69
3115 3304 1.203187 ACTCCAAGACAGTGCCTCCTA 60.203 52.381 0.00 0.00 0.00 2.94
3116 3305 1.480137 CTCCAAGACAGTGCCTCCTAG 59.520 57.143 0.00 0.00 0.00 3.02
3117 3306 1.077169 TCCAAGACAGTGCCTCCTAGA 59.923 52.381 0.00 0.00 0.00 2.43
3118 3307 1.902508 CCAAGACAGTGCCTCCTAGAA 59.097 52.381 0.00 0.00 0.00 2.10
3119 3308 2.093764 CCAAGACAGTGCCTCCTAGAAG 60.094 54.545 0.00 0.00 0.00 2.85
3120 3309 1.859302 AGACAGTGCCTCCTAGAAGG 58.141 55.000 0.00 0.00 39.62 3.46
3121 3310 0.827368 GACAGTGCCTCCTAGAAGGG 59.173 60.000 0.00 0.00 36.88 3.95
3122 3311 0.618968 ACAGTGCCTCCTAGAAGGGG 60.619 60.000 0.00 0.00 36.88 4.79
3123 3312 0.325671 CAGTGCCTCCTAGAAGGGGA 60.326 60.000 0.00 0.00 38.47 4.81
3124 3313 0.325765 AGTGCCTCCTAGAAGGGGAC 60.326 60.000 0.00 4.79 38.47 4.46
3125 3314 1.381327 TGCCTCCTAGAAGGGGACG 60.381 63.158 0.00 0.00 38.47 4.79
3126 3315 2.798364 GCCTCCTAGAAGGGGACGC 61.798 68.421 0.00 0.00 38.47 5.19
3127 3316 2.134933 CCTCCTAGAAGGGGACGCC 61.135 68.421 0.00 0.00 38.47 5.68
3128 3317 2.042230 TCCTAGAAGGGGACGCCC 60.042 66.667 4.64 6.38 44.51 6.13
3137 3326 4.603946 GGGACGCCCACGGATAGC 62.604 72.222 9.72 0.00 44.65 2.97
3138 3327 3.537874 GGACGCCCACGGATAGCT 61.538 66.667 0.00 0.00 46.04 3.32
3139 3328 2.279517 GACGCCCACGGATAGCTG 60.280 66.667 0.00 0.00 46.04 4.24
3140 3329 4.530857 ACGCCCACGGATAGCTGC 62.531 66.667 0.00 0.00 46.04 5.25
3142 3331 4.175337 GCCCACGGATAGCTGCCA 62.175 66.667 0.00 0.00 0.00 4.92
3143 3332 2.203070 CCCACGGATAGCTGCCAC 60.203 66.667 0.00 0.00 0.00 5.01
3144 3333 2.203070 CCACGGATAGCTGCCACC 60.203 66.667 0.00 0.00 0.00 4.61
3147 3336 2.279517 CGGATAGCTGCCACCGTC 60.280 66.667 17.22 1.50 40.42 4.79
3148 3337 2.786495 CGGATAGCTGCCACCGTCT 61.786 63.158 17.22 0.00 40.42 4.18
3149 3338 1.227380 GGATAGCTGCCACCGTCTG 60.227 63.158 0.00 0.00 0.00 3.51
3150 3339 1.676678 GGATAGCTGCCACCGTCTGA 61.677 60.000 0.00 0.00 0.00 3.27
3151 3340 0.390860 GATAGCTGCCACCGTCTGAT 59.609 55.000 0.00 0.00 0.00 2.90
3152 3341 0.390860 ATAGCTGCCACCGTCTGATC 59.609 55.000 0.00 0.00 0.00 2.92
3153 3342 1.676678 TAGCTGCCACCGTCTGATCC 61.677 60.000 0.00 0.00 0.00 3.36
3154 3343 2.202797 CTGCCACCGTCTGATCCG 60.203 66.667 0.00 0.00 0.00 4.18
3155 3344 2.994995 TGCCACCGTCTGATCCGT 60.995 61.111 0.00 0.00 0.00 4.69
3156 3345 1.663379 CTGCCACCGTCTGATCCGTA 61.663 60.000 0.00 0.00 0.00 4.02
3157 3346 1.065928 GCCACCGTCTGATCCGTAG 59.934 63.158 0.00 0.00 0.00 3.51
3158 3347 1.381928 GCCACCGTCTGATCCGTAGA 61.382 60.000 0.00 0.00 0.00 2.59
3159 3348 1.319541 CCACCGTCTGATCCGTAGAT 58.680 55.000 0.00 0.00 34.57 1.98
3172 3361 3.934068 TCCGTAGATCAAGTTTTCACCC 58.066 45.455 0.00 0.00 0.00 4.61
3173 3362 2.671396 CCGTAGATCAAGTTTTCACCCG 59.329 50.000 0.00 0.00 0.00 5.28
3174 3363 2.671396 CGTAGATCAAGTTTTCACCCGG 59.329 50.000 0.00 0.00 0.00 5.73
3175 3364 3.615592 CGTAGATCAAGTTTTCACCCGGA 60.616 47.826 0.73 0.00 0.00 5.14
3176 3365 3.059352 AGATCAAGTTTTCACCCGGAG 57.941 47.619 0.73 0.00 0.00 4.63
3177 3366 2.372172 AGATCAAGTTTTCACCCGGAGT 59.628 45.455 0.73 0.00 0.00 3.85
3178 3367 2.249844 TCAAGTTTTCACCCGGAGTC 57.750 50.000 0.73 0.00 0.00 3.36
3179 3368 1.487142 TCAAGTTTTCACCCGGAGTCA 59.513 47.619 0.73 0.00 0.00 3.41
3180 3369 1.602377 CAAGTTTTCACCCGGAGTCAC 59.398 52.381 0.73 0.00 0.00 3.67
3181 3370 0.834612 AGTTTTCACCCGGAGTCACA 59.165 50.000 0.73 0.00 0.00 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.804036 TGTTCTTGGAGTCATCGTTGTT 58.196 40.909 0.00 0.00 0.00 2.83
2 3 5.446473 GCTTATGTTCTTGGAGTCATCGTTG 60.446 44.000 0.00 0.00 0.00 4.10
3 4 4.631813 GCTTATGTTCTTGGAGTCATCGTT 59.368 41.667 0.00 0.00 0.00 3.85
4 5 4.184629 GCTTATGTTCTTGGAGTCATCGT 58.815 43.478 0.00 0.00 0.00 3.73
5 6 3.243877 CGCTTATGTTCTTGGAGTCATCG 59.756 47.826 0.00 0.00 0.00 3.84
6 7 3.557595 CCGCTTATGTTCTTGGAGTCATC 59.442 47.826 0.00 0.00 0.00 2.92
7 8 3.535561 CCGCTTATGTTCTTGGAGTCAT 58.464 45.455 0.00 0.00 0.00 3.06
8 9 2.935238 GCCGCTTATGTTCTTGGAGTCA 60.935 50.000 0.00 0.00 0.00 3.41
9 10 1.666189 GCCGCTTATGTTCTTGGAGTC 59.334 52.381 0.00 0.00 0.00 3.36
10 11 1.739067 GCCGCTTATGTTCTTGGAGT 58.261 50.000 0.00 0.00 0.00 3.85
11 12 0.652592 CGCCGCTTATGTTCTTGGAG 59.347 55.000 0.00 0.00 0.00 3.86
12 13 0.742990 CCGCCGCTTATGTTCTTGGA 60.743 55.000 0.00 0.00 0.00 3.53
13 14 1.024579 ACCGCCGCTTATGTTCTTGG 61.025 55.000 0.00 0.00 0.00 3.61
14 15 0.373716 GACCGCCGCTTATGTTCTTG 59.626 55.000 0.00 0.00 0.00 3.02
15 16 1.082117 CGACCGCCGCTTATGTTCTT 61.082 55.000 0.00 0.00 0.00 2.52
16 17 1.518572 CGACCGCCGCTTATGTTCT 60.519 57.895 0.00 0.00 0.00 3.01
17 18 0.526096 TACGACCGCCGCTTATGTTC 60.526 55.000 0.00 0.00 43.32 3.18
18 19 0.526954 CTACGACCGCCGCTTATGTT 60.527 55.000 0.00 0.00 43.32 2.71
19 20 1.065273 CTACGACCGCCGCTTATGT 59.935 57.895 0.00 0.00 43.32 2.29
20 21 0.933509 GTCTACGACCGCCGCTTATG 60.934 60.000 0.00 0.00 43.32 1.90
21 22 1.358046 GTCTACGACCGCCGCTTAT 59.642 57.895 0.00 0.00 43.32 1.73
22 23 2.764314 GGTCTACGACCGCCGCTTA 61.764 63.158 0.00 0.00 43.14 3.09
23 24 4.125695 GGTCTACGACCGCCGCTT 62.126 66.667 0.00 0.00 43.14 4.68
31 32 4.487412 CGGGCGGTGGTCTACGAC 62.487 72.222 0.00 0.00 37.40 4.34
33 34 4.487412 GACGGGCGGTGGTCTACG 62.487 72.222 1.11 0.00 0.00 3.51
34 35 4.139234 GGACGGGCGGTGGTCTAC 62.139 72.222 1.11 0.00 33.70 2.59
47 48 2.190981 CGGAAAGATAAGGTTCGGACG 58.809 52.381 0.00 0.00 0.00 4.79
93 94 0.960364 AGGGTCGACAATGCGCAATT 60.960 50.000 17.11 6.72 0.00 2.32
94 95 1.377202 AGGGTCGACAATGCGCAAT 60.377 52.632 17.11 1.49 0.00 3.56
141 158 2.742372 CCGGTTCTTGCTCCCACG 60.742 66.667 0.00 0.00 0.00 4.94
166 183 2.230508 CACATGGATGCCATATCTTGCC 59.769 50.000 0.00 0.00 43.15 4.52
174 191 1.000612 TGGTGCACATGGATGCCAT 59.999 52.632 20.43 0.00 46.37 4.40
240 257 0.464916 GTGTTCAACCCAACTCCCGT 60.465 55.000 0.00 0.00 0.00 5.28
241 258 0.464735 TGTGTTCAACCCAACTCCCG 60.465 55.000 0.00 0.00 0.00 5.14
260 285 0.036875 GTGGAGGCTGGCAGTTAAGT 59.963 55.000 17.16 0.00 0.00 2.24
284 315 1.206132 CTATACTGGCAACACCACGGA 59.794 52.381 0.00 0.00 46.36 4.69
321 353 4.680537 ACGACGGCCCTCTCAGGT 62.681 66.667 0.00 0.00 31.93 4.00
352 404 0.763223 GGTGGGGATCCGGATAGTGT 60.763 60.000 19.15 0.00 35.24 3.55
540 593 2.159296 CGTGGGATGACGACATTAGACA 60.159 50.000 1.10 0.00 42.10 3.41
615 669 3.134458 CAACTAGGAATTGAGCCGATCC 58.866 50.000 0.00 0.00 0.00 3.36
724 780 2.749839 TTGGCCGCCTGGAAATCG 60.750 61.111 11.61 0.00 37.49 3.34
728 784 2.045045 CATCTTGGCCGCCTGGAA 60.045 61.111 11.61 0.00 37.49 3.53
747 803 1.895020 CTCGATCCCCACGTTTCCCA 61.895 60.000 0.00 0.00 0.00 4.37
938 994 3.305177 TTCCCAACCGAGTAGCCGC 62.305 63.158 0.00 0.00 0.00 6.53
939 995 1.447314 GTTCCCAACCGAGTAGCCG 60.447 63.158 0.00 0.00 0.00 5.52
940 996 0.108281 GAGTTCCCAACCGAGTAGCC 60.108 60.000 0.00 0.00 0.00 3.93
1032 1088 1.900016 GGGTTTCTTTCCCGCGGTT 60.900 57.895 26.12 0.00 35.27 4.44
1038 1094 1.173913 CGATGGTGGGTTTCTTTCCC 58.826 55.000 0.00 0.00 44.81 3.97
1200 1265 3.041469 GCAGGGCTTCCTCCTCCTG 62.041 68.421 0.00 0.00 46.93 3.86
1686 1796 2.792290 CGCGATTGACAGTGCCGAG 61.792 63.158 0.00 0.00 0.00 4.63
1887 1997 2.281762 GCCAAACACGTCGTAGATCATC 59.718 50.000 0.00 0.00 40.67 2.92
2071 2184 0.695347 AGAAGCCCCTTGAGAACCTG 59.305 55.000 0.00 0.00 0.00 4.00
2088 2201 2.046023 CTGGGATTGCACGCCAGA 60.046 61.111 6.38 0.00 33.34 3.86
2091 2204 3.346631 CTTGCTGGGATTGCACGCC 62.347 63.158 0.00 0.00 40.40 5.68
2152 2265 0.740868 ACCGGAGCATCGTCATTGTG 60.741 55.000 9.46 0.00 34.37 3.33
2204 2324 6.749036 AGAATTATGGTTACAGGACCCTAG 57.251 41.667 0.00 0.00 39.01 3.02
2205 2325 7.847848 ACTAAGAATTATGGTTACAGGACCCTA 59.152 37.037 0.00 0.00 39.01 3.53
2207 2327 6.896883 ACTAAGAATTATGGTTACAGGACCC 58.103 40.000 0.00 0.00 39.01 4.46
2210 2330 7.567622 AGCCTACTAAGAATTATGGTTACAGGA 59.432 37.037 0.00 0.00 0.00 3.86
2226 2346 8.639761 ACTATGGTTTACATGTAGCCTACTAAG 58.360 37.037 21.52 15.40 40.82 2.18
2228 2348 8.418662 CAACTATGGTTTACATGTAGCCTACTA 58.581 37.037 21.52 11.58 40.82 1.82
2229 2349 7.093024 ACAACTATGGTTTACATGTAGCCTACT 60.093 37.037 21.52 12.90 40.82 2.57
2230 2350 7.046033 ACAACTATGGTTTACATGTAGCCTAC 58.954 38.462 21.52 12.56 40.82 3.18
2262 2383 2.888447 GCACAGGCACCTCACCTCT 61.888 63.158 0.00 0.00 40.72 3.69
2266 2387 1.376037 GTAGGCACAGGCACCTCAC 60.376 63.158 0.00 0.00 43.71 3.51
2313 2434 1.619827 CCCATGCAACTCACAAATGGT 59.380 47.619 0.00 0.00 36.80 3.55
2314 2435 1.894466 TCCCATGCAACTCACAAATGG 59.106 47.619 0.00 0.00 38.01 3.16
2315 2436 2.673043 GCTCCCATGCAACTCACAAATG 60.673 50.000 0.00 0.00 0.00 2.32
2339 2473 8.870879 CACTAGGAAACAAGTAGTAATTAGCAC 58.129 37.037 0.00 0.00 0.00 4.40
2340 2474 8.038944 CCACTAGGAAACAAGTAGTAATTAGCA 58.961 37.037 0.00 0.00 36.89 3.49
2341 2475 7.011202 GCCACTAGGAAACAAGTAGTAATTAGC 59.989 40.741 0.00 0.00 36.89 3.09
2342 2476 8.038944 TGCCACTAGGAAACAAGTAGTAATTAG 58.961 37.037 0.00 0.00 36.89 1.73
2343 2477 7.909518 TGCCACTAGGAAACAAGTAGTAATTA 58.090 34.615 0.00 0.00 36.89 1.40
2344 2478 6.775708 TGCCACTAGGAAACAAGTAGTAATT 58.224 36.000 0.00 0.00 36.89 1.40
2346 2480 5.279809 CCTGCCACTAGGAAACAAGTAGTAA 60.280 44.000 0.00 0.00 40.42 2.24
2348 2482 3.008049 CCTGCCACTAGGAAACAAGTAGT 59.992 47.826 0.00 0.00 40.42 2.73
2349 2483 3.260884 TCCTGCCACTAGGAAACAAGTAG 59.739 47.826 0.00 0.00 43.71 2.57
2365 2499 2.112190 AGGTTCTAAGCTACTCCTGCC 58.888 52.381 0.00 0.00 34.49 4.85
2373 2507 2.111384 CTGCTCCCAGGTTCTAAGCTA 58.889 52.381 0.00 0.00 34.49 3.32
2384 2518 2.988010 TACATTACAGCTGCTCCCAG 57.012 50.000 15.27 1.60 42.13 4.45
2387 2521 4.892433 AGATCATACATTACAGCTGCTCC 58.108 43.478 15.27 0.00 0.00 4.70
2388 2522 5.782047 AGAGATCATACATTACAGCTGCTC 58.218 41.667 15.27 7.51 0.00 4.26
2390 2524 4.620609 CGAGAGATCATACATTACAGCTGC 59.379 45.833 15.27 0.00 0.00 5.25
2391 2525 5.628606 CACGAGAGATCATACATTACAGCTG 59.371 44.000 13.48 13.48 0.00 4.24
2392 2526 5.532779 TCACGAGAGATCATACATTACAGCT 59.467 40.000 0.00 0.00 0.00 4.24
2422 2566 8.950210 CAAAGGATGAACAATGTGTAGTCTTAT 58.050 33.333 0.00 0.00 0.00 1.73
2450 2594 2.884639 CAAAGTACCAGTCCTTTGTGGG 59.115 50.000 7.48 0.00 41.53 4.61
2455 2599 3.393278 TGTAGGCAAAGTACCAGTCCTTT 59.607 43.478 0.00 0.00 0.00 3.11
2502 2646 3.586470 TGAGACCTTAAAGGCCAACAA 57.414 42.857 5.01 0.00 39.63 2.83
2503 2647 3.117663 ACTTGAGACCTTAAAGGCCAACA 60.118 43.478 5.01 0.00 39.63 3.33
2504 2648 3.487372 ACTTGAGACCTTAAAGGCCAAC 58.513 45.455 5.01 0.00 39.63 3.77
2512 2658 8.540388 AGCATTAGATGTAACTTGAGACCTTAA 58.460 33.333 0.00 0.00 0.00 1.85
2533 2679 2.634453 AGCAGCCTTAAAACCAAGCATT 59.366 40.909 0.00 0.00 0.00 3.56
2549 2695 3.488216 GCAGCCTTATTTACAAGAGCAGC 60.488 47.826 0.00 0.00 32.05 5.25
2551 2697 3.941483 GAGCAGCCTTATTTACAAGAGCA 59.059 43.478 0.00 0.00 0.00 4.26
2552 2698 3.001736 CGAGCAGCCTTATTTACAAGAGC 59.998 47.826 0.00 0.00 0.00 4.09
2553 2699 4.184629 ACGAGCAGCCTTATTTACAAGAG 58.815 43.478 0.00 0.00 0.00 2.85
2554 2700 4.081642 AGACGAGCAGCCTTATTTACAAGA 60.082 41.667 0.00 0.00 0.00 3.02
2555 2701 4.184629 AGACGAGCAGCCTTATTTACAAG 58.815 43.478 0.00 0.00 0.00 3.16
2568 2739 1.734047 GCAGTGGTAAGAGACGAGCAG 60.734 57.143 0.00 0.00 0.00 4.24
2582 2753 2.950781 TCTAGGAGATACTGGCAGTGG 58.049 52.381 29.65 3.15 0.00 4.00
2608 2779 7.011763 CACACTGTCAGTTTCTGGATATATTGG 59.988 40.741 1.67 0.00 31.51 3.16
2617 2788 3.185246 ACTCACACTGTCAGTTTCTGG 57.815 47.619 1.67 0.00 31.51 3.86
2652 2823 5.234972 CAGGTTTGCAGAATTGGAAAAGTTC 59.765 40.000 0.00 0.00 44.62 3.01
2677 2866 6.294361 TCAGTTATGTAGGCTGTTATGTGT 57.706 37.500 0.00 0.00 0.00 3.72
2694 2883 3.332187 TGGACAAACCATGGGATCAGTTA 59.668 43.478 18.09 0.00 44.64 2.24
2695 2884 2.109834 TGGACAAACCATGGGATCAGTT 59.890 45.455 18.09 0.00 44.64 3.16
2697 2886 2.512692 TGGACAAACCATGGGATCAG 57.487 50.000 18.09 3.55 44.64 2.90
2727 2916 7.445402 GCTAATAACTGGATCAGGATTGCTAAA 59.555 37.037 0.00 0.00 35.51 1.85
2728 2917 6.936900 GCTAATAACTGGATCAGGATTGCTAA 59.063 38.462 0.00 0.00 35.51 3.09
2729 2918 6.467677 GCTAATAACTGGATCAGGATTGCTA 58.532 40.000 0.00 0.00 35.51 3.49
2730 2919 5.312079 GCTAATAACTGGATCAGGATTGCT 58.688 41.667 0.00 0.00 35.51 3.91
2731 2920 4.457257 GGCTAATAACTGGATCAGGATTGC 59.543 45.833 0.00 5.71 35.51 3.56
2732 2921 5.006386 GGGCTAATAACTGGATCAGGATTG 58.994 45.833 0.00 0.00 35.51 2.67
2733 2922 4.916424 AGGGCTAATAACTGGATCAGGATT 59.084 41.667 0.00 2.24 35.51 3.01
2734 2923 4.288105 CAGGGCTAATAACTGGATCAGGAT 59.712 45.833 0.00 0.00 35.51 3.24
2735 2924 3.648067 CAGGGCTAATAACTGGATCAGGA 59.352 47.826 0.00 0.00 35.51 3.86
2736 2925 3.808618 GCAGGGCTAATAACTGGATCAGG 60.809 52.174 0.00 0.00 35.51 3.86
2737 2926 3.406764 GCAGGGCTAATAACTGGATCAG 58.593 50.000 0.00 0.00 37.52 2.90
2738 2927 2.106511 GGCAGGGCTAATAACTGGATCA 59.893 50.000 0.00 0.00 32.98 2.92
2739 2928 2.106511 TGGCAGGGCTAATAACTGGATC 59.893 50.000 0.00 0.00 32.98 3.36
2740 2929 2.135189 TGGCAGGGCTAATAACTGGAT 58.865 47.619 0.00 0.00 32.98 3.41
2741 2930 1.590591 TGGCAGGGCTAATAACTGGA 58.409 50.000 0.00 0.00 32.98 3.86
2742 2931 2.024414 GTTGGCAGGGCTAATAACTGG 58.976 52.381 0.00 0.00 30.69 4.00
2743 2932 2.722094 TGTTGGCAGGGCTAATAACTG 58.278 47.619 0.00 0.00 30.69 3.16
2744 2933 3.449746 TTGTTGGCAGGGCTAATAACT 57.550 42.857 0.00 0.00 30.69 2.24
2745 2934 4.887655 AGTATTGTTGGCAGGGCTAATAAC 59.112 41.667 0.00 0.00 33.82 1.89
2746 2935 4.887071 CAGTATTGTTGGCAGGGCTAATAA 59.113 41.667 0.00 0.00 35.16 1.40
2747 2936 4.165180 TCAGTATTGTTGGCAGGGCTAATA 59.835 41.667 0.00 0.00 30.69 0.98
2748 2937 3.053693 TCAGTATTGTTGGCAGGGCTAAT 60.054 43.478 0.00 0.00 30.69 1.73
2749 2938 2.307392 TCAGTATTGTTGGCAGGGCTAA 59.693 45.455 0.00 0.00 0.00 3.09
2750 2939 1.912731 TCAGTATTGTTGGCAGGGCTA 59.087 47.619 0.00 0.00 0.00 3.93
2751 2940 0.698238 TCAGTATTGTTGGCAGGGCT 59.302 50.000 0.00 0.00 0.00 5.19
2752 2941 1.678101 GATCAGTATTGTTGGCAGGGC 59.322 52.381 0.00 0.00 0.00 5.19
2753 2942 2.301346 GGATCAGTATTGTTGGCAGGG 58.699 52.381 0.00 0.00 0.00 4.45
2754 2943 2.301346 GGGATCAGTATTGTTGGCAGG 58.699 52.381 0.00 0.00 0.00 4.85
2755 2944 3.003394 TGGGATCAGTATTGTTGGCAG 57.997 47.619 0.00 0.00 0.00 4.85
2756 2945 3.289836 CATGGGATCAGTATTGTTGGCA 58.710 45.455 0.00 0.00 0.00 4.92
2757 2946 2.624838 CCATGGGATCAGTATTGTTGGC 59.375 50.000 2.85 0.00 0.00 4.52
2758 2947 3.902218 ACCATGGGATCAGTATTGTTGG 58.098 45.455 18.09 0.00 0.00 3.77
2759 2948 5.185635 ACAAACCATGGGATCAGTATTGTTG 59.814 40.000 18.09 5.13 0.00 3.33
2760 2949 5.332743 ACAAACCATGGGATCAGTATTGTT 58.667 37.500 18.09 0.00 0.00 2.83
2761 2950 4.934356 ACAAACCATGGGATCAGTATTGT 58.066 39.130 18.09 10.39 0.00 2.71
2762 2951 4.339247 GGACAAACCATGGGATCAGTATTG 59.661 45.833 18.09 9.81 38.79 1.90
2763 2952 4.017591 TGGACAAACCATGGGATCAGTATT 60.018 41.667 18.09 0.00 44.64 1.89
2764 2953 3.527253 TGGACAAACCATGGGATCAGTAT 59.473 43.478 18.09 0.00 44.64 2.12
2765 2954 2.916269 TGGACAAACCATGGGATCAGTA 59.084 45.455 18.09 0.00 44.64 2.74
2766 2955 1.710244 TGGACAAACCATGGGATCAGT 59.290 47.619 18.09 6.99 44.64 3.41
2767 2956 2.512692 TGGACAAACCATGGGATCAG 57.487 50.000 18.09 3.55 44.64 2.90
2777 2966 7.439655 TGCTAAATTACAAAATGTGGACAAACC 59.560 33.333 0.00 0.00 39.54 3.27
2778 2967 8.272866 GTGCTAAATTACAAAATGTGGACAAAC 58.727 33.333 0.00 0.00 0.00 2.93
2779 2968 8.200792 AGTGCTAAATTACAAAATGTGGACAAA 58.799 29.630 0.00 0.00 0.00 2.83
2780 2969 7.721402 AGTGCTAAATTACAAAATGTGGACAA 58.279 30.769 0.00 0.00 0.00 3.18
2781 2970 7.283625 AGTGCTAAATTACAAAATGTGGACA 57.716 32.000 0.00 0.00 0.00 4.02
2782 2971 6.806739 GGAGTGCTAAATTACAAAATGTGGAC 59.193 38.462 0.00 0.00 0.00 4.02
2783 2972 6.719370 AGGAGTGCTAAATTACAAAATGTGGA 59.281 34.615 0.00 0.00 0.00 4.02
2784 2973 6.808212 CAGGAGTGCTAAATTACAAAATGTGG 59.192 38.462 0.00 0.00 0.00 4.17
2785 2974 7.592938 TCAGGAGTGCTAAATTACAAAATGTG 58.407 34.615 0.00 0.00 0.00 3.21
2786 2975 7.759489 TCAGGAGTGCTAAATTACAAAATGT 57.241 32.000 0.00 0.00 0.00 2.71
2787 2976 7.917505 GGATCAGGAGTGCTAAATTACAAAATG 59.082 37.037 0.00 0.00 0.00 2.32
2788 2977 7.615365 TGGATCAGGAGTGCTAAATTACAAAAT 59.385 33.333 0.00 0.00 0.00 1.82
2789 2978 6.945435 TGGATCAGGAGTGCTAAATTACAAAA 59.055 34.615 0.00 0.00 0.00 2.44
2790 2979 6.480763 TGGATCAGGAGTGCTAAATTACAAA 58.519 36.000 0.00 0.00 0.00 2.83
2791 2980 6.061022 TGGATCAGGAGTGCTAAATTACAA 57.939 37.500 0.00 0.00 0.00 2.41
2792 2981 5.189736 ACTGGATCAGGAGTGCTAAATTACA 59.810 40.000 0.00 0.00 35.51 2.41
2793 2982 5.675538 ACTGGATCAGGAGTGCTAAATTAC 58.324 41.667 0.00 0.00 35.51 1.89
2794 2983 5.957771 ACTGGATCAGGAGTGCTAAATTA 57.042 39.130 0.00 0.00 35.51 1.40
2795 2984 4.851639 ACTGGATCAGGAGTGCTAAATT 57.148 40.909 0.00 0.00 35.51 1.82
2796 2985 4.851639 AACTGGATCAGGAGTGCTAAAT 57.148 40.909 0.00 0.00 35.51 1.40
2797 2986 5.957771 ATAACTGGATCAGGAGTGCTAAA 57.042 39.130 0.00 0.00 35.51 1.85
2815 3004 7.176690 ACATATATTGTTGGCAGGGCTAATAAC 59.823 37.037 0.00 0.00 33.82 1.89
2872 3061 9.183368 TGTTGTGATGATGTTGGCTTTATAATA 57.817 29.630 0.00 0.00 0.00 0.98
2873 3062 8.065473 TGTTGTGATGATGTTGGCTTTATAAT 57.935 30.769 0.00 0.00 0.00 1.28
2874 3063 7.459795 TGTTGTGATGATGTTGGCTTTATAA 57.540 32.000 0.00 0.00 0.00 0.98
2875 3064 7.201812 GGATGTTGTGATGATGTTGGCTTTATA 60.202 37.037 0.00 0.00 0.00 0.98
2876 3065 5.981088 TGTTGTGATGATGTTGGCTTTAT 57.019 34.783 0.00 0.00 0.00 1.40
2877 3066 5.105797 GGATGTTGTGATGATGTTGGCTTTA 60.106 40.000 0.00 0.00 0.00 1.85
2878 3067 4.322198 GGATGTTGTGATGATGTTGGCTTT 60.322 41.667 0.00 0.00 0.00 3.51
2879 3068 3.194116 GGATGTTGTGATGATGTTGGCTT 59.806 43.478 0.00 0.00 0.00 4.35
2880 3069 2.756760 GGATGTTGTGATGATGTTGGCT 59.243 45.455 0.00 0.00 0.00 4.75
2881 3070 2.478370 CGGATGTTGTGATGATGTTGGC 60.478 50.000 0.00 0.00 0.00 4.52
2882 3071 2.097954 CCGGATGTTGTGATGATGTTGG 59.902 50.000 0.00 0.00 0.00 3.77
2883 3072 3.009026 TCCGGATGTTGTGATGATGTTG 58.991 45.455 0.00 0.00 0.00 3.33
2884 3073 3.009723 GTCCGGATGTTGTGATGATGTT 58.990 45.455 7.81 0.00 0.00 2.71
2885 3074 2.027285 TGTCCGGATGTTGTGATGATGT 60.027 45.455 7.81 0.00 0.00 3.06
2886 3075 2.610833 CTGTCCGGATGTTGTGATGATG 59.389 50.000 7.81 0.00 0.00 3.07
2887 3076 2.501316 TCTGTCCGGATGTTGTGATGAT 59.499 45.455 7.81 0.00 0.00 2.45
2888 3077 1.899142 TCTGTCCGGATGTTGTGATGA 59.101 47.619 7.81 0.00 0.00 2.92
2889 3078 2.002586 GTCTGTCCGGATGTTGTGATG 58.997 52.381 7.81 0.00 0.00 3.07
2890 3079 1.066143 GGTCTGTCCGGATGTTGTGAT 60.066 52.381 7.81 0.00 0.00 3.06
2891 3080 0.320374 GGTCTGTCCGGATGTTGTGA 59.680 55.000 7.81 0.00 0.00 3.58
2892 3081 2.840974 GGTCTGTCCGGATGTTGTG 58.159 57.895 7.81 0.00 0.00 3.33
2902 3091 0.108992 TGCGTTGTATCGGTCTGTCC 60.109 55.000 0.00 0.00 0.00 4.02
2903 3092 0.989890 GTGCGTTGTATCGGTCTGTC 59.010 55.000 0.00 0.00 0.00 3.51
2904 3093 0.315886 TGTGCGTTGTATCGGTCTGT 59.684 50.000 0.00 0.00 0.00 3.41
2905 3094 0.713883 GTGTGCGTTGTATCGGTCTG 59.286 55.000 0.00 0.00 0.00 3.51
2906 3095 0.389426 GGTGTGCGTTGTATCGGTCT 60.389 55.000 0.00 0.00 0.00 3.85
2907 3096 0.668096 TGGTGTGCGTTGTATCGGTC 60.668 55.000 0.00 0.00 0.00 4.79
2908 3097 0.947180 GTGGTGTGCGTTGTATCGGT 60.947 55.000 0.00 0.00 0.00 4.69
2909 3098 1.632046 GGTGGTGTGCGTTGTATCGG 61.632 60.000 0.00 0.00 0.00 4.18
2910 3099 0.946700 TGGTGGTGTGCGTTGTATCG 60.947 55.000 0.00 0.00 0.00 2.92
2911 3100 0.515564 GTGGTGGTGTGCGTTGTATC 59.484 55.000 0.00 0.00 0.00 2.24
2912 3101 0.887387 GGTGGTGGTGTGCGTTGTAT 60.887 55.000 0.00 0.00 0.00 2.29
2913 3102 1.524165 GGTGGTGGTGTGCGTTGTA 60.524 57.895 0.00 0.00 0.00 2.41
2914 3103 2.826738 GGTGGTGGTGTGCGTTGT 60.827 61.111 0.00 0.00 0.00 3.32
2915 3104 3.947841 CGGTGGTGGTGTGCGTTG 61.948 66.667 0.00 0.00 0.00 4.10
2920 3109 3.582120 GTGTGCGGTGGTGGTGTG 61.582 66.667 0.00 0.00 0.00 3.82
2921 3110 3.630298 TTGTGTGCGGTGGTGGTGT 62.630 57.895 0.00 0.00 0.00 4.16
2922 3111 2.826287 TTGTGTGCGGTGGTGGTG 60.826 61.111 0.00 0.00 0.00 4.17
2923 3112 2.826738 GTTGTGTGCGGTGGTGGT 60.827 61.111 0.00 0.00 0.00 4.16
2924 3113 2.826287 TGTTGTGTGCGGTGGTGG 60.826 61.111 0.00 0.00 0.00 4.61
2925 3114 2.402572 TGTGTTGTGTGCGGTGGTG 61.403 57.895 0.00 0.00 0.00 4.17
2926 3115 2.045829 TGTGTTGTGTGCGGTGGT 60.046 55.556 0.00 0.00 0.00 4.16
2927 3116 1.723608 ATGTGTGTTGTGTGCGGTGG 61.724 55.000 0.00 0.00 0.00 4.61
2928 3117 0.316937 GATGTGTGTTGTGTGCGGTG 60.317 55.000 0.00 0.00 0.00 4.94
2929 3118 1.444119 GGATGTGTGTTGTGTGCGGT 61.444 55.000 0.00 0.00 0.00 5.68
2930 3119 1.282570 GGATGTGTGTTGTGTGCGG 59.717 57.895 0.00 0.00 0.00 5.69
2931 3120 0.380024 TTGGATGTGTGTTGTGTGCG 59.620 50.000 0.00 0.00 0.00 5.34
2932 3121 1.675483 TCTTGGATGTGTGTTGTGTGC 59.325 47.619 0.00 0.00 0.00 4.57
2933 3122 2.682352 TGTCTTGGATGTGTGTTGTGTG 59.318 45.455 0.00 0.00 0.00 3.82
2934 3123 2.997980 TGTCTTGGATGTGTGTTGTGT 58.002 42.857 0.00 0.00 0.00 3.72
2935 3124 3.565063 TCATGTCTTGGATGTGTGTTGTG 59.435 43.478 0.00 0.00 0.00 3.33
2936 3125 3.819368 TCATGTCTTGGATGTGTGTTGT 58.181 40.909 0.00 0.00 0.00 3.32
2937 3126 5.412286 TGTATCATGTCTTGGATGTGTGTTG 59.588 40.000 0.00 0.00 0.00 3.33
2938 3127 5.559770 TGTATCATGTCTTGGATGTGTGTT 58.440 37.500 0.00 0.00 0.00 3.32
2939 3128 5.164620 TGTATCATGTCTTGGATGTGTGT 57.835 39.130 0.00 0.00 0.00 3.72
2940 3129 6.403964 CCTTTGTATCATGTCTTGGATGTGTG 60.404 42.308 0.00 0.00 0.00 3.82
2941 3130 5.649395 CCTTTGTATCATGTCTTGGATGTGT 59.351 40.000 0.00 0.00 0.00 3.72
2942 3131 5.649395 ACCTTTGTATCATGTCTTGGATGTG 59.351 40.000 0.00 0.00 0.00 3.21
2943 3132 5.649395 CACCTTTGTATCATGTCTTGGATGT 59.351 40.000 0.00 0.00 0.00 3.06
2944 3133 5.649395 ACACCTTTGTATCATGTCTTGGATG 59.351 40.000 0.00 0.00 32.60 3.51
2945 3134 5.819991 ACACCTTTGTATCATGTCTTGGAT 58.180 37.500 0.00 0.00 32.60 3.41
2946 3135 5.241403 ACACCTTTGTATCATGTCTTGGA 57.759 39.130 0.00 0.00 32.60 3.53
2947 3136 4.093408 CGACACCTTTGTATCATGTCTTGG 59.907 45.833 0.00 0.00 38.00 3.61
2948 3137 4.929211 TCGACACCTTTGTATCATGTCTTG 59.071 41.667 0.00 0.00 38.00 3.02
2949 3138 5.147330 TCGACACCTTTGTATCATGTCTT 57.853 39.130 0.00 0.00 38.00 3.01
2950 3139 4.748892 CTCGACACCTTTGTATCATGTCT 58.251 43.478 0.00 0.00 38.00 3.41
2951 3140 3.307242 GCTCGACACCTTTGTATCATGTC 59.693 47.826 0.00 0.00 35.47 3.06
2952 3141 3.262420 GCTCGACACCTTTGTATCATGT 58.738 45.455 0.00 0.00 35.47 3.21
2953 3142 3.062639 GTGCTCGACACCTTTGTATCATG 59.937 47.826 6.82 0.00 44.02 3.07
2954 3143 3.262420 GTGCTCGACACCTTTGTATCAT 58.738 45.455 6.82 0.00 44.02 2.45
2955 3144 2.683968 GTGCTCGACACCTTTGTATCA 58.316 47.619 6.82 0.00 44.02 2.15
2969 3158 4.096003 ATTGGGGGACGGTGCTCG 62.096 66.667 0.00 0.00 45.88 5.03
2970 3159 2.438434 CATTGGGGGACGGTGCTC 60.438 66.667 0.00 0.00 0.00 4.26
2971 3160 4.740822 GCATTGGGGGACGGTGCT 62.741 66.667 0.00 0.00 33.25 4.40
2973 3162 4.358841 TGGCATTGGGGGACGGTG 62.359 66.667 0.00 0.00 0.00 4.94
2974 3163 4.360405 GTGGCATTGGGGGACGGT 62.360 66.667 0.00 0.00 0.00 4.83
2981 3170 4.067913 GTTGGCGGTGGCATTGGG 62.068 66.667 0.00 0.00 42.47 4.12
2982 3171 4.067913 GGTTGGCGGTGGCATTGG 62.068 66.667 0.00 0.00 42.47 3.16
2983 3172 2.768503 CTTGGTTGGCGGTGGCATTG 62.769 60.000 0.00 0.00 42.47 2.82
2984 3173 2.522923 TTGGTTGGCGGTGGCATT 60.523 55.556 0.00 0.00 42.47 3.56
2985 3174 2.990967 CTTGGTTGGCGGTGGCAT 60.991 61.111 0.00 0.00 42.47 4.40
2988 3177 1.602323 TTAGCTTGGTTGGCGGTGG 60.602 57.895 0.00 0.00 34.52 4.61
2989 3178 0.889186 AGTTAGCTTGGTTGGCGGTG 60.889 55.000 0.00 0.00 34.52 4.94
2990 3179 0.688487 TAGTTAGCTTGGTTGGCGGT 59.312 50.000 0.00 0.00 34.52 5.68
2991 3180 1.816074 TTAGTTAGCTTGGTTGGCGG 58.184 50.000 0.00 0.00 34.52 6.13
2992 3181 3.907894 TTTTAGTTAGCTTGGTTGGCG 57.092 42.857 0.00 0.00 34.52 5.69
2993 3182 5.633601 GTCATTTTTAGTTAGCTTGGTTGGC 59.366 40.000 0.00 0.00 0.00 4.52
2994 3183 5.856455 CGTCATTTTTAGTTAGCTTGGTTGG 59.144 40.000 0.00 0.00 0.00 3.77
2995 3184 6.664515 TCGTCATTTTTAGTTAGCTTGGTTG 58.335 36.000 0.00 0.00 0.00 3.77
2996 3185 6.870971 TCGTCATTTTTAGTTAGCTTGGTT 57.129 33.333 0.00 0.00 0.00 3.67
2997 3186 6.870971 TTCGTCATTTTTAGTTAGCTTGGT 57.129 33.333 0.00 0.00 0.00 3.67
2998 3187 7.526608 TCATTCGTCATTTTTAGTTAGCTTGG 58.473 34.615 0.00 0.00 0.00 3.61
3002 3191 9.434559 GGTTATCATTCGTCATTTTTAGTTAGC 57.565 33.333 0.00 0.00 0.00 3.09
3003 3192 9.632969 CGGTTATCATTCGTCATTTTTAGTTAG 57.367 33.333 0.00 0.00 0.00 2.34
3004 3193 8.117988 GCGGTTATCATTCGTCATTTTTAGTTA 58.882 33.333 0.00 0.00 0.00 2.24
3005 3194 6.964934 GCGGTTATCATTCGTCATTTTTAGTT 59.035 34.615 0.00 0.00 0.00 2.24
3006 3195 6.315393 AGCGGTTATCATTCGTCATTTTTAGT 59.685 34.615 0.00 0.00 0.00 2.24
3007 3196 6.715464 AGCGGTTATCATTCGTCATTTTTAG 58.285 36.000 0.00 0.00 0.00 1.85
3008 3197 6.671614 AGCGGTTATCATTCGTCATTTTTA 57.328 33.333 0.00 0.00 0.00 1.52
3009 3198 5.560966 AGCGGTTATCATTCGTCATTTTT 57.439 34.783 0.00 0.00 0.00 1.94
3010 3199 5.123186 TCAAGCGGTTATCATTCGTCATTTT 59.877 36.000 0.00 0.00 0.00 1.82
3011 3200 4.634004 TCAAGCGGTTATCATTCGTCATTT 59.366 37.500 0.00 0.00 0.00 2.32
3012 3201 4.188462 TCAAGCGGTTATCATTCGTCATT 58.812 39.130 0.00 0.00 0.00 2.57
3013 3202 3.792401 TCAAGCGGTTATCATTCGTCAT 58.208 40.909 0.00 0.00 0.00 3.06
3014 3203 3.239587 TCAAGCGGTTATCATTCGTCA 57.760 42.857 0.00 0.00 0.00 4.35
3015 3204 3.863424 TCTTCAAGCGGTTATCATTCGTC 59.137 43.478 0.00 0.00 0.00 4.20
3016 3205 3.857052 TCTTCAAGCGGTTATCATTCGT 58.143 40.909 0.00 0.00 0.00 3.85
3017 3206 3.246226 CCTCTTCAAGCGGTTATCATTCG 59.754 47.826 0.00 0.00 0.00 3.34
3018 3207 4.271291 GTCCTCTTCAAGCGGTTATCATTC 59.729 45.833 0.00 0.00 0.00 2.67
3019 3208 4.192317 GTCCTCTTCAAGCGGTTATCATT 58.808 43.478 0.00 0.00 0.00 2.57
3020 3209 3.738281 CGTCCTCTTCAAGCGGTTATCAT 60.738 47.826 0.00 0.00 0.00 2.45
3021 3210 2.416836 CGTCCTCTTCAAGCGGTTATCA 60.417 50.000 0.00 0.00 0.00 2.15
3022 3211 2.194271 CGTCCTCTTCAAGCGGTTATC 58.806 52.381 0.00 0.00 0.00 1.75
3023 3212 1.134788 CCGTCCTCTTCAAGCGGTTAT 60.135 52.381 0.00 0.00 37.87 1.89
3024 3213 0.245539 CCGTCCTCTTCAAGCGGTTA 59.754 55.000 0.00 0.00 37.87 2.85
3025 3214 1.004918 CCGTCCTCTTCAAGCGGTT 60.005 57.895 0.00 0.00 37.87 4.44
3026 3215 1.878656 CTCCGTCCTCTTCAAGCGGT 61.879 60.000 0.00 0.00 42.62 5.68
3027 3216 1.153745 CTCCGTCCTCTTCAAGCGG 60.154 63.158 0.00 0.00 43.32 5.52
3028 3217 0.456995 GTCTCCGTCCTCTTCAAGCG 60.457 60.000 0.00 0.00 0.00 4.68
3029 3218 0.108567 GGTCTCCGTCCTCTTCAAGC 60.109 60.000 0.00 0.00 0.00 4.01
3030 3219 1.474879 GAGGTCTCCGTCCTCTTCAAG 59.525 57.143 4.91 0.00 45.56 3.02
3031 3220 1.546961 GAGGTCTCCGTCCTCTTCAA 58.453 55.000 4.91 0.00 45.56 2.69
3032 3221 3.267908 GAGGTCTCCGTCCTCTTCA 57.732 57.895 4.91 0.00 45.56 3.02
3043 3232 1.343465 TCGTTTCTTGGTGGAGGTCTC 59.657 52.381 0.00 0.00 0.00 3.36
3044 3233 1.344763 CTCGTTTCTTGGTGGAGGTCT 59.655 52.381 0.00 0.00 0.00 3.85
3045 3234 1.608283 CCTCGTTTCTTGGTGGAGGTC 60.608 57.143 0.00 0.00 39.51 3.85
3046 3235 0.396811 CCTCGTTTCTTGGTGGAGGT 59.603 55.000 0.00 0.00 39.51 3.85
3047 3236 0.685097 TCCTCGTTTCTTGGTGGAGG 59.315 55.000 0.00 0.00 44.46 4.30
3048 3237 1.338200 CCTCCTCGTTTCTTGGTGGAG 60.338 57.143 0.00 0.00 40.34 3.86
3049 3238 0.685097 CCTCCTCGTTTCTTGGTGGA 59.315 55.000 0.00 0.00 36.83 4.02
3050 3239 0.321653 CCCTCCTCGTTTCTTGGTGG 60.322 60.000 0.00 0.00 35.09 4.61
3051 3240 0.321653 CCCCTCCTCGTTTCTTGGTG 60.322 60.000 0.00 0.00 0.00 4.17
3052 3241 1.489560 CCCCCTCCTCGTTTCTTGGT 61.490 60.000 0.00 0.00 0.00 3.67
3053 3242 1.299976 CCCCCTCCTCGTTTCTTGG 59.700 63.158 0.00 0.00 0.00 3.61
3068 3257 2.304180 CTCTGTCATGACCATATCCCCC 59.696 54.545 22.85 0.00 0.00 5.40
3069 3258 2.289945 GCTCTGTCATGACCATATCCCC 60.290 54.545 22.85 0.00 0.00 4.81
3070 3259 2.369860 TGCTCTGTCATGACCATATCCC 59.630 50.000 22.85 5.81 0.00 3.85
3071 3260 3.556633 CCTGCTCTGTCATGACCATATCC 60.557 52.174 22.85 7.28 0.00 2.59
3072 3261 3.556633 CCCTGCTCTGTCATGACCATATC 60.557 52.174 22.85 8.94 0.00 1.63
3073 3262 2.371179 CCCTGCTCTGTCATGACCATAT 59.629 50.000 22.85 0.00 0.00 1.78
3074 3263 1.764723 CCCTGCTCTGTCATGACCATA 59.235 52.381 22.85 7.47 0.00 2.74
3075 3264 0.545171 CCCTGCTCTGTCATGACCAT 59.455 55.000 22.85 0.00 0.00 3.55
3076 3265 0.545071 TCCCTGCTCTGTCATGACCA 60.545 55.000 22.85 12.22 0.00 4.02
3077 3266 0.107945 GTCCCTGCTCTGTCATGACC 60.108 60.000 22.85 8.07 0.00 4.02
3078 3267 0.901124 AGTCCCTGCTCTGTCATGAC 59.099 55.000 19.27 19.27 0.00 3.06
3079 3268 1.189752 GAGTCCCTGCTCTGTCATGA 58.810 55.000 0.00 0.00 32.99 3.07
3080 3269 0.177604 GGAGTCCCTGCTCTGTCATG 59.822 60.000 0.00 0.00 35.89 3.07
3081 3270 0.252421 TGGAGTCCCTGCTCTGTCAT 60.252 55.000 6.74 0.00 35.89 3.06
3082 3271 0.471780 TTGGAGTCCCTGCTCTGTCA 60.472 55.000 6.74 0.00 35.89 3.58
3083 3272 0.248843 CTTGGAGTCCCTGCTCTGTC 59.751 60.000 6.74 0.00 35.89 3.51
3084 3273 0.178921 TCTTGGAGTCCCTGCTCTGT 60.179 55.000 6.74 0.00 35.89 3.41
3085 3274 0.248843 GTCTTGGAGTCCCTGCTCTG 59.751 60.000 6.74 0.00 35.89 3.35
3086 3275 0.178921 TGTCTTGGAGTCCCTGCTCT 60.179 55.000 6.74 0.00 35.89 4.09
3087 3276 0.248843 CTGTCTTGGAGTCCCTGCTC 59.751 60.000 6.74 0.00 34.89 4.26
3088 3277 0.472734 ACTGTCTTGGAGTCCCTGCT 60.473 55.000 6.74 0.00 0.00 4.24
3089 3278 0.321122 CACTGTCTTGGAGTCCCTGC 60.321 60.000 6.74 0.00 0.00 4.85
3090 3279 0.321122 GCACTGTCTTGGAGTCCCTG 60.321 60.000 6.74 0.00 0.00 4.45
3091 3280 1.484444 GGCACTGTCTTGGAGTCCCT 61.484 60.000 6.74 0.00 0.00 4.20
3092 3281 1.003233 GGCACTGTCTTGGAGTCCC 60.003 63.158 6.74 0.00 0.00 4.46
3093 3282 0.036858 GAGGCACTGTCTTGGAGTCC 60.037 60.000 0.73 0.73 41.55 3.85
3094 3283 0.036858 GGAGGCACTGTCTTGGAGTC 60.037 60.000 0.00 0.00 41.55 3.36
3095 3284 0.472734 AGGAGGCACTGTCTTGGAGT 60.473 55.000 0.00 0.00 41.55 3.85
3096 3285 1.480137 CTAGGAGGCACTGTCTTGGAG 59.520 57.143 0.00 0.00 41.55 3.86
3097 3286 1.077169 TCTAGGAGGCACTGTCTTGGA 59.923 52.381 0.00 0.00 41.55 3.53
3098 3287 1.561643 TCTAGGAGGCACTGTCTTGG 58.438 55.000 0.00 0.00 41.55 3.61
3099 3288 2.093764 CCTTCTAGGAGGCACTGTCTTG 60.094 54.545 3.42 0.00 41.55 3.02
3100 3289 2.183679 CCTTCTAGGAGGCACTGTCTT 58.816 52.381 3.42 0.00 41.55 3.01
3101 3290 1.621072 CCCTTCTAGGAGGCACTGTCT 60.621 57.143 12.22 0.00 41.55 3.41
3102 3291 0.827368 CCCTTCTAGGAGGCACTGTC 59.173 60.000 12.22 0.00 41.55 3.51
3103 3292 0.618968 CCCCTTCTAGGAGGCACTGT 60.619 60.000 12.22 0.00 41.55 3.55
3104 3293 0.325671 TCCCCTTCTAGGAGGCACTG 60.326 60.000 12.22 0.00 41.55 3.66
3106 3295 1.677637 CGTCCCCTTCTAGGAGGCAC 61.678 65.000 12.22 9.24 37.67 5.01
3107 3296 1.381327 CGTCCCCTTCTAGGAGGCA 60.381 63.158 12.22 0.00 37.67 4.75
3108 3297 3.539842 CGTCCCCTTCTAGGAGGC 58.460 66.667 12.22 0.00 37.67 4.70
3109 3298 2.134933 GGCGTCCCCTTCTAGGAGG 61.135 68.421 10.57 10.57 37.67 4.30
3110 3299 3.539842 GGCGTCCCCTTCTAGGAG 58.460 66.667 0.00 0.00 37.67 3.69
3120 3309 4.603946 GCTATCCGTGGGCGTCCC 62.604 72.222 2.12 5.67 45.71 4.46
3121 3310 3.537874 AGCTATCCGTGGGCGTCC 61.538 66.667 0.00 0.00 36.15 4.79
3122 3311 2.279517 CAGCTATCCGTGGGCGTC 60.280 66.667 0.00 0.00 36.15 5.19
3123 3312 4.530857 GCAGCTATCCGTGGGCGT 62.531 66.667 0.00 0.00 36.15 5.68
3125 3314 4.175337 TGGCAGCTATCCGTGGGC 62.175 66.667 0.00 0.00 0.00 5.36
3126 3315 2.203070 GTGGCAGCTATCCGTGGG 60.203 66.667 0.00 0.00 0.00 4.61
3127 3316 2.203070 GGTGGCAGCTATCCGTGG 60.203 66.667 9.90 0.00 0.00 4.94
3128 3317 2.586079 CGGTGGCAGCTATCCGTG 60.586 66.667 15.48 0.00 38.45 4.94
3130 3319 2.279517 GACGGTGGCAGCTATCCG 60.280 66.667 15.48 13.31 46.98 4.18
3131 3320 1.227380 CAGACGGTGGCAGCTATCC 60.227 63.158 15.48 0.00 0.00 2.59
3132 3321 0.390860 ATCAGACGGTGGCAGCTATC 59.609 55.000 15.48 11.90 0.00 2.08
3133 3322 0.390860 GATCAGACGGTGGCAGCTAT 59.609 55.000 15.48 2.30 0.00 2.97
3134 3323 1.676678 GGATCAGACGGTGGCAGCTA 61.677 60.000 15.48 0.00 0.00 3.32
3135 3324 2.581354 GATCAGACGGTGGCAGCT 59.419 61.111 15.48 1.59 0.00 4.24
3136 3325 2.512515 GGATCAGACGGTGGCAGC 60.513 66.667 6.62 6.62 0.00 5.25
3137 3326 1.663379 TACGGATCAGACGGTGGCAG 61.663 60.000 0.00 0.00 35.23 4.85
3138 3327 1.663379 CTACGGATCAGACGGTGGCA 61.663 60.000 0.00 0.00 35.23 4.92
3139 3328 1.065928 CTACGGATCAGACGGTGGC 59.934 63.158 0.00 0.00 35.23 5.01
3140 3329 1.267261 GATCTACGGATCAGACGGTGG 59.733 57.143 0.00 0.00 45.54 4.61
3141 3330 2.690173 GATCTACGGATCAGACGGTG 57.310 55.000 0.00 0.00 45.54 4.94
3149 3338 4.571176 GGGTGAAAACTTGATCTACGGATC 59.429 45.833 0.00 0.00 46.20 3.36
3150 3339 4.514401 GGGTGAAAACTTGATCTACGGAT 58.486 43.478 0.00 0.00 34.45 4.18
3151 3340 3.615592 CGGGTGAAAACTTGATCTACGGA 60.616 47.826 0.00 0.00 0.00 4.69
3152 3341 2.671396 CGGGTGAAAACTTGATCTACGG 59.329 50.000 0.00 0.00 0.00 4.02
3153 3342 2.671396 CCGGGTGAAAACTTGATCTACG 59.329 50.000 0.00 0.00 0.00 3.51
3154 3343 3.933332 CTCCGGGTGAAAACTTGATCTAC 59.067 47.826 0.00 0.00 0.00 2.59
3155 3344 3.581332 ACTCCGGGTGAAAACTTGATCTA 59.419 43.478 0.00 0.00 0.00 1.98
3156 3345 2.372172 ACTCCGGGTGAAAACTTGATCT 59.628 45.455 0.00 0.00 0.00 2.75
3157 3346 2.742589 GACTCCGGGTGAAAACTTGATC 59.257 50.000 0.00 0.00 0.00 2.92
3158 3347 2.105821 TGACTCCGGGTGAAAACTTGAT 59.894 45.455 0.00 0.00 0.00 2.57
3159 3348 1.487142 TGACTCCGGGTGAAAACTTGA 59.513 47.619 0.00 0.00 0.00 3.02
3160 3349 1.602377 GTGACTCCGGGTGAAAACTTG 59.398 52.381 0.00 0.00 0.00 3.16
3161 3350 1.210967 TGTGACTCCGGGTGAAAACTT 59.789 47.619 0.00 0.00 0.00 2.66
3162 3351 0.834612 TGTGACTCCGGGTGAAAACT 59.165 50.000 0.00 0.00 0.00 2.66
3163 3352 3.390003 TGTGACTCCGGGTGAAAAC 57.610 52.632 0.00 0.00 0.00 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.