Multiple sequence alignment - TraesCS5D01G168000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G168000 chr5D 100.000 4976 0 0 1 4976 262843150 262838175 0.000000e+00 9190.0
1 TraesCS5D01G168000 chr5D 93.478 46 3 0 2 47 83916994 83916949 8.940000e-08 69.4
2 TraesCS5D01G168000 chr5A 92.813 2087 80 33 48 2095 348721471 348719416 0.000000e+00 2959.0
3 TraesCS5D01G168000 chr5A 94.359 1631 43 16 2763 4361 348719096 348717483 0.000000e+00 2457.0
4 TraesCS5D01G168000 chr5A 98.276 522 7 1 4455 4976 348717484 348716965 0.000000e+00 913.0
5 TraesCS5D01G168000 chr5A 97.778 225 5 0 2239 2463 348719404 348719180 6.040000e-104 388.0
6 TraesCS5D01G168000 chr5A 93.684 95 4 2 2521 2615 348719173 348719081 1.870000e-29 141.0
7 TraesCS5D01G168000 chr5A 79.167 96 18 2 4879 4973 537248308 537248214 1.160000e-06 65.8
8 TraesCS5D01G168000 chr5B 93.005 1644 32 35 2763 4361 295381920 295380315 0.000000e+00 2322.0
9 TraesCS5D01G168000 chr5B 95.543 875 17 6 1195 2062 295383144 295382285 0.000000e+00 1380.0
10 TraesCS5D01G168000 chr5B 98.084 522 8 1 4455 4976 295380316 295379797 0.000000e+00 907.0
11 TraesCS5D01G168000 chr5B 96.538 491 12 2 196 681 295385138 295384648 0.000000e+00 808.0
12 TraesCS5D01G168000 chr5B 93.263 475 23 6 674 1141 295383836 295383364 0.000000e+00 691.0
13 TraesCS5D01G168000 chr5B 96.035 227 7 1 2239 2463 295382219 295381993 7.870000e-98 368.0
14 TraesCS5D01G168000 chr5B 88.172 93 1 4 2522 2614 295381988 295381906 8.810000e-18 102.0
15 TraesCS5D01G168000 chr5B 100.000 43 0 0 2053 2095 295382273 295382231 4.130000e-11 80.5
16 TraesCS5D01G168000 chr5B 89.091 55 3 3 4877 4930 611866288 611866236 1.160000e-06 65.8
17 TraesCS5D01G168000 chr4B 93.277 119 4 4 4360 4476 99581210 99581326 6.620000e-39 172.0
18 TraesCS5D01G168000 chr4B 97.980 99 2 0 4359 4457 216815095 216814997 6.620000e-39 172.0
19 TraesCS5D01G168000 chr4B 89.474 57 5 1 2469 2524 673168514 673168570 2.490000e-08 71.3
20 TraesCS5D01G168000 chr4B 97.368 38 1 0 2478 2515 664635726 664635763 1.160000e-06 65.8
21 TraesCS5D01G168000 chr4B 94.872 39 0 2 4876 4913 237056968 237057005 5.380000e-05 60.2
22 TraesCS5D01G168000 chr2D 96.226 106 3 1 4360 4465 488233728 488233624 6.620000e-39 172.0
23 TraesCS5D01G168000 chr2D 93.043 115 4 4 4356 4467 380431689 380431576 1.110000e-36 165.0
24 TraesCS5D01G168000 chr2D 95.745 47 2 0 2 48 517893708 517893754 5.340000e-10 76.8
25 TraesCS5D01G168000 chr2B 87.013 154 14 4 2612 2764 429459231 429459379 8.570000e-38 169.0
26 TraesCS5D01G168000 chr2B 89.431 123 10 3 2086 2206 631199855 631199734 8.630000e-33 152.0
27 TraesCS5D01G168000 chr2B 86.567 134 15 2 2099 2231 404424361 404424492 1.440000e-30 145.0
28 TraesCS5D01G168000 chr2B 97.872 47 1 0 2 48 87117773 87117727 1.150000e-11 82.4
29 TraesCS5D01G168000 chr2B 90.741 54 5 0 2478 2531 782533447 782533394 6.910000e-09 73.1
30 TraesCS5D01G168000 chr2B 89.286 56 5 1 2469 2524 434622915 434622969 8.940000e-08 69.4
31 TraesCS5D01G168000 chr7D 95.283 106 4 1 4351 4456 489010679 489010783 3.080000e-37 167.0
32 TraesCS5D01G168000 chr7B 92.437 119 6 3 4359 4475 744290784 744290667 3.080000e-37 167.0
33 TraesCS5D01G168000 chr7B 86.364 154 15 4 2612 2764 672390927 672390779 3.990000e-36 163.0
34 TraesCS5D01G168000 chr7A 93.750 112 6 1 4346 4456 128147530 128147641 3.080000e-37 167.0
35 TraesCS5D01G168000 chr7A 93.578 109 6 1 2099 2206 642103944 642104052 1.430000e-35 161.0
36 TraesCS5D01G168000 chr7A 89.431 123 10 3 2086 2206 113023301 113023422 8.630000e-33 152.0
37 TraesCS5D01G168000 chr7A 93.750 48 3 0 2478 2525 680918148 680918195 6.910000e-09 73.1
38 TraesCS5D01G168000 chr4A 93.750 112 5 2 4352 4463 631219800 631219909 3.080000e-37 167.0
39 TraesCS5D01G168000 chr4A 89.552 134 7 3 2099 2231 661993704 661993831 3.990000e-36 163.0
40 TraesCS5D01G168000 chr4A 85.806 155 16 4 2612 2765 537246447 537246596 5.160000e-35 159.0
41 TraesCS5D01G168000 chr4A 87.786 131 12 4 2079 2206 321033900 321034029 3.100000e-32 150.0
42 TraesCS5D01G168000 chr6B 92.105 114 7 2 4359 4471 95757365 95757253 5.160000e-35 159.0
43 TraesCS5D01G168000 chr6B 94.340 53 2 1 2479 2530 72180967 72181019 4.130000e-11 80.5
44 TraesCS5D01G168000 chr6B 93.617 47 3 0 2 48 498685416 498685462 2.490000e-08 71.3
45 TraesCS5D01G168000 chr6B 89.583 48 4 1 4879 4926 211810942 211810896 5.380000e-05 60.2
46 TraesCS5D01G168000 chr3B 86.184 152 15 5 2616 2766 746851191 746851337 5.160000e-35 159.0
47 TraesCS5D01G168000 chr1D 92.035 113 8 1 2102 2213 464800331 464800219 1.850000e-34 158.0
48 TraesCS5D01G168000 chr3A 87.786 131 12 4 2079 2206 424664022 424664151 3.100000e-32 150.0
49 TraesCS5D01G168000 chr3A 88.189 127 11 4 2082 2206 629282714 629282590 1.120000e-31 148.0
50 TraesCS5D01G168000 chr3A 94.231 52 2 1 2478 2528 601378683 601378632 1.490000e-10 78.7
51 TraesCS5D01G168000 chr3A 94.000 50 3 0 2 51 637285887 637285838 5.340000e-10 76.8
52 TraesCS5D01G168000 chr1A 85.333 150 12 4 2616 2764 555955984 555955844 4.010000e-31 147.0
53 TraesCS5D01G168000 chr1A 83.851 161 15 5 2616 2774 555954678 555954527 5.190000e-30 143.0
54 TraesCS5D01G168000 chr1A 97.959 49 1 0 2 50 101268945 101268897 8.880000e-13 86.1
55 TraesCS5D01G168000 chr1A 92.000 50 4 0 2 51 101267740 101267691 2.490000e-08 71.3
56 TraesCS5D01G168000 chr1B 92.857 56 3 1 2478 2533 489812466 489812412 4.130000e-11 80.5
57 TraesCS5D01G168000 chr1B 95.652 46 2 0 2478 2523 162781848 162781803 1.920000e-09 75.0
58 TraesCS5D01G168000 chr1B 88.462 52 5 1 4879 4930 553454121 553454071 1.500000e-05 62.1
59 TraesCS5D01G168000 chr3D 95.745 47 2 0 2 48 31443931 31443885 5.340000e-10 76.8
60 TraesCS5D01G168000 chr2A 93.617 47 3 0 2 48 681611448 681611402 2.490000e-08 71.3
61 TraesCS5D01G168000 chr2A 79.798 99 15 5 4878 4973 725890649 725890553 3.210000e-07 67.6
62 TraesCS5D01G168000 chr6D 88.000 50 3 3 4878 4926 59026466 59026513 6.960000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G168000 chr5D 262838175 262843150 4975 True 9190.0000 9190 100.000 1 4976 1 chr5D.!!$R2 4975
1 TraesCS5D01G168000 chr5A 348716965 348721471 4506 True 1371.6000 2959 95.382 48 4976 5 chr5A.!!$R2 4928
2 TraesCS5D01G168000 chr5B 295379797 295385138 5341 True 832.3125 2322 95.080 196 4976 8 chr5B.!!$R2 4780

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
46 47 0.320421 TACCTGCGTTGGAGTTGCTC 60.320 55.0 2.95 0.00 0.00 4.26 F
1551 2564 1.055040 AAGCTGGCTCTGTCTTGTCT 58.945 50.0 0.00 0.00 0.00 3.41 F
1944 2962 0.179227 CGAATGATTTGCGACGCACA 60.179 50.0 24.42 17.82 38.71 4.57 F
2229 3272 1.001282 AGACTAGGAACGGAGGGAGT 58.999 55.0 0.00 0.00 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1916 2934 1.906966 GCAAATCATTCGCACGTTCAG 59.093 47.619 0.00 0.00 0.0 3.02 R
2737 3782 1.074727 TCCCGAAATGGAGGCAAAAGA 59.925 47.619 0.00 0.00 42.0 2.52 R
2800 3845 1.103803 GATCTGTACGCCTGTCCTGA 58.896 55.000 0.00 0.00 0.0 3.86 R
4037 5144 0.676782 GGTTTCCATGGTCAGACCCG 60.677 60.000 17.59 8.09 37.5 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 3.803886 GGCGGACGAAATGGGTAC 58.196 61.111 0.00 0.00 0.00 3.34
43 44 2.540145 GGTACCTGCGTTGGAGTTG 58.460 57.895 4.06 0.00 0.00 3.16
44 45 1.574702 GGTACCTGCGTTGGAGTTGC 61.575 60.000 4.06 0.00 0.00 4.17
45 46 0.602905 GTACCTGCGTTGGAGTTGCT 60.603 55.000 2.95 0.00 0.00 3.91
46 47 0.320421 TACCTGCGTTGGAGTTGCTC 60.320 55.000 2.95 0.00 0.00 4.26
51 52 1.070134 TGCGTTGGAGTTGCTCTTACT 59.930 47.619 0.00 0.00 0.00 2.24
58 59 2.229302 GGAGTTGCTCTTACTGTCGACT 59.771 50.000 17.92 0.00 0.00 4.18
61 62 3.120269 AGTTGCTCTTACTGTCGACTACG 60.120 47.826 17.92 7.76 41.26 3.51
84 85 2.549754 AGAAGCCTGTGACGAATTTGTG 59.450 45.455 2.13 0.00 0.00 3.33
90 91 1.398739 TGTGACGAATTTGTGTGCGTT 59.601 42.857 2.13 0.00 37.07 4.84
104 105 4.153655 TGTGTGCGTTTGTACTGTGTTAAA 59.846 37.500 0.00 0.00 0.00 1.52
132 133 3.530535 GAGACATGAGAAGGGAAAGAGC 58.469 50.000 0.00 0.00 0.00 4.09
133 134 2.909006 AGACATGAGAAGGGAAAGAGCA 59.091 45.455 0.00 0.00 0.00 4.26
240 243 1.928868 CCACCAATTCTGAAAGGGCT 58.071 50.000 14.32 0.77 0.00 5.19
376 379 2.687370 GAATTTGGTTCCCACATGTGC 58.313 47.619 20.81 6.48 30.78 4.57
464 471 1.621992 AGAGACTGAGGCGTTCTTGA 58.378 50.000 0.00 0.00 0.00 3.02
572 583 4.291792 TCCTTCCTCCGTATATTGGTTGA 58.708 43.478 0.00 0.00 0.00 3.18
643 659 3.637432 CGAGCAGGTCTCTATCATTGTC 58.363 50.000 0.00 0.00 39.70 3.18
696 1531 3.557577 TTGTTGCATCGAAATCCTGTG 57.442 42.857 0.00 0.00 0.00 3.66
702 1537 1.665679 CATCGAAATCCTGTGTTCCGG 59.334 52.381 0.00 0.00 0.00 5.14
740 1576 2.688958 CCACGGTTTGGTTTGGTTTCTA 59.311 45.455 0.00 0.00 41.10 2.10
741 1577 3.319689 CCACGGTTTGGTTTGGTTTCTAT 59.680 43.478 0.00 0.00 41.10 1.98
742 1578 4.542735 CACGGTTTGGTTTGGTTTCTATC 58.457 43.478 0.00 0.00 0.00 2.08
743 1579 4.277423 CACGGTTTGGTTTGGTTTCTATCT 59.723 41.667 0.00 0.00 0.00 1.98
745 1581 5.219633 CGGTTTGGTTTGGTTTCTATCTTG 58.780 41.667 0.00 0.00 0.00 3.02
747 1583 5.303333 GGTTTGGTTTGGTTTCTATCTTGGA 59.697 40.000 0.00 0.00 0.00 3.53
748 1584 6.213677 GTTTGGTTTGGTTTCTATCTTGGAC 58.786 40.000 0.00 0.00 0.00 4.02
751 1587 5.300792 TGGTTTGGTTTCTATCTTGGACAAC 59.699 40.000 0.00 0.00 0.00 3.32
783 1623 3.494332 GAGCCCAAATCCAATGCTCTAT 58.506 45.455 0.00 0.00 43.85 1.98
1130 1971 7.786178 TGTAATCTCCGGAAAATTCATGTAG 57.214 36.000 5.23 0.00 0.00 2.74
1163 2004 3.959535 TTCCATGGTGCAAGATTTTCC 57.040 42.857 12.58 0.00 0.00 3.13
1165 2006 1.135024 CCATGGTGCAAGATTTTCCCG 60.135 52.381 2.57 0.00 0.00 5.14
1168 2009 1.611491 TGGTGCAAGATTTTCCCGTTC 59.389 47.619 0.00 0.00 0.00 3.95
1172 2013 4.022676 GGTGCAAGATTTTCCCGTTCTTTA 60.023 41.667 0.00 0.00 0.00 1.85
1502 2515 1.869767 CGCGGATACCTCGTAAGTACT 59.130 52.381 0.00 0.00 39.48 2.73
1514 2527 6.151648 ACCTCGTAAGTACTGTAAGCATTGTA 59.848 38.462 0.00 0.00 36.17 2.41
1541 2554 3.515630 GCAAGGAAATTAAAGCTGGCTC 58.484 45.455 0.00 0.00 0.00 4.70
1542 2555 3.194329 GCAAGGAAATTAAAGCTGGCTCT 59.806 43.478 0.00 0.00 0.00 4.09
1543 2556 4.741342 CAAGGAAATTAAAGCTGGCTCTG 58.259 43.478 0.00 0.00 0.00 3.35
1544 2557 4.039603 AGGAAATTAAAGCTGGCTCTGT 57.960 40.909 0.00 0.00 0.00 3.41
1545 2558 4.013050 AGGAAATTAAAGCTGGCTCTGTC 58.987 43.478 0.00 0.00 0.00 3.51
1546 2559 4.013050 GGAAATTAAAGCTGGCTCTGTCT 58.987 43.478 0.00 0.00 0.00 3.41
1551 2564 1.055040 AAGCTGGCTCTGTCTTGTCT 58.945 50.000 0.00 0.00 0.00 3.41
1916 2934 4.314440 TCTGCCGGCCTGTGTGAC 62.314 66.667 26.77 0.00 0.00 3.67
1943 2961 1.455908 GCGAATGATTTGCGACGCAC 61.456 55.000 24.42 12.22 44.29 5.34
1944 2962 0.179227 CGAATGATTTGCGACGCACA 60.179 50.000 24.42 17.82 38.71 4.57
1945 2963 1.529622 CGAATGATTTGCGACGCACAT 60.530 47.619 24.42 22.34 38.71 3.21
1946 2964 1.841944 GAATGATTTGCGACGCACATG 59.158 47.619 24.89 0.00 38.71 3.21
2095 3138 5.123661 GTGGACCACTAGTGACTAGTTCTAC 59.876 48.000 24.68 19.97 43.82 2.59
2097 3140 5.585844 GGACCACTAGTGACTAGTTCTACTC 59.414 48.000 24.68 11.49 43.82 2.59
2098 3141 6.377245 ACCACTAGTGACTAGTTCTACTCT 57.623 41.667 24.68 0.00 43.82 3.24
2099 3142 6.781943 ACCACTAGTGACTAGTTCTACTCTT 58.218 40.000 24.68 0.00 43.82 2.85
2100 3143 7.232910 ACCACTAGTGACTAGTTCTACTCTTT 58.767 38.462 24.68 0.00 43.82 2.52
2101 3144 7.391275 ACCACTAGTGACTAGTTCTACTCTTTC 59.609 40.741 24.68 0.00 43.82 2.62
2102 3145 7.608761 CCACTAGTGACTAGTTCTACTCTTTCT 59.391 40.741 24.68 0.00 43.82 2.52
2103 3146 9.656040 CACTAGTGACTAGTTCTACTCTTTCTA 57.344 37.037 21.84 0.00 43.82 2.10
2195 3238 9.886132 AGTGTAGATTCATTTATTTTACTCCGT 57.114 29.630 0.00 0.00 0.00 4.69
2212 3255 8.969260 TTACTCCGTATGTATCACTAGAAAGA 57.031 34.615 0.00 0.00 0.00 2.52
2213 3256 7.261829 ACTCCGTATGTATCACTAGAAAGAC 57.738 40.000 0.00 0.00 0.00 3.01
2214 3257 7.055378 ACTCCGTATGTATCACTAGAAAGACT 58.945 38.462 0.00 0.00 0.00 3.24
2215 3258 8.209584 ACTCCGTATGTATCACTAGAAAGACTA 58.790 37.037 0.00 0.00 0.00 2.59
2225 3268 4.904253 CTAGAAAGACTAGGAACGGAGG 57.096 50.000 0.00 0.00 43.35 4.30
2226 3269 2.458620 AGAAAGACTAGGAACGGAGGG 58.541 52.381 0.00 0.00 0.00 4.30
2227 3270 2.042706 AGAAAGACTAGGAACGGAGGGA 59.957 50.000 0.00 0.00 0.00 4.20
2228 3271 2.146920 AAGACTAGGAACGGAGGGAG 57.853 55.000 0.00 0.00 0.00 4.30
2229 3272 1.001282 AGACTAGGAACGGAGGGAGT 58.999 55.000 0.00 0.00 0.00 3.85
2230 3273 2.203584 AGACTAGGAACGGAGGGAGTA 58.796 52.381 0.00 0.00 0.00 2.59
2235 3278 1.020437 GGAACGGAGGGAGTAGTACG 58.980 60.000 0.00 0.00 0.00 3.67
2236 3279 1.680249 GGAACGGAGGGAGTAGTACGT 60.680 57.143 0.00 0.00 35.95 3.57
2237 3280 2.420129 GGAACGGAGGGAGTAGTACGTA 60.420 54.545 0.00 0.00 33.85 3.57
2368 3411 3.122971 GCGGTTCGTTGGTAGCCC 61.123 66.667 0.00 0.00 0.00 5.19
2465 3510 3.193157 CTGCATTATCATTACGCAGGC 57.807 47.619 0.00 0.00 44.94 4.85
2467 3512 2.948315 TGCATTATCATTACGCAGGCAA 59.052 40.909 0.00 0.00 0.00 4.52
2468 3513 3.569277 TGCATTATCATTACGCAGGCAAT 59.431 39.130 0.00 0.00 0.00 3.56
2469 3514 4.037803 TGCATTATCATTACGCAGGCAATT 59.962 37.500 0.00 0.00 0.00 2.32
2470 3515 5.240403 TGCATTATCATTACGCAGGCAATTA 59.760 36.000 0.00 0.00 0.00 1.40
2471 3516 5.569059 GCATTATCATTACGCAGGCAATTAC 59.431 40.000 0.00 0.00 0.00 1.89
2472 3517 6.568462 GCATTATCATTACGCAGGCAATTACT 60.568 38.462 0.00 0.00 0.00 2.24
2473 3518 6.539649 TTATCATTACGCAGGCAATTACTC 57.460 37.500 0.00 0.00 0.00 2.59
2474 3519 3.202906 TCATTACGCAGGCAATTACTCC 58.797 45.455 0.00 0.00 0.00 3.85
2475 3520 2.032680 TTACGCAGGCAATTACTCCC 57.967 50.000 0.00 0.00 0.00 4.30
2476 3521 1.200519 TACGCAGGCAATTACTCCCT 58.799 50.000 0.00 0.00 0.00 4.20
2477 3522 1.200519 ACGCAGGCAATTACTCCCTA 58.799 50.000 0.00 0.00 0.00 3.53
2478 3523 1.768870 ACGCAGGCAATTACTCCCTAT 59.231 47.619 0.00 0.00 0.00 2.57
2479 3524 2.172717 ACGCAGGCAATTACTCCCTATT 59.827 45.455 0.00 0.00 0.00 1.73
2480 3525 3.214328 CGCAGGCAATTACTCCCTATTT 58.786 45.455 0.00 0.00 0.00 1.40
2481 3526 3.003689 CGCAGGCAATTACTCCCTATTTG 59.996 47.826 0.00 0.00 0.00 2.32
2482 3527 4.207165 GCAGGCAATTACTCCCTATTTGA 58.793 43.478 0.00 0.00 0.00 2.69
2483 3528 4.644685 GCAGGCAATTACTCCCTATTTGAA 59.355 41.667 0.00 0.00 0.00 2.69
2484 3529 5.450550 GCAGGCAATTACTCCCTATTTGAAC 60.451 44.000 0.00 0.00 0.00 3.18
2485 3530 5.888161 CAGGCAATTACTCCCTATTTGAACT 59.112 40.000 0.00 0.00 0.00 3.01
2486 3531 7.054124 CAGGCAATTACTCCCTATTTGAACTA 58.946 38.462 0.00 0.00 0.00 2.24
2487 3532 7.556275 CAGGCAATTACTCCCTATTTGAACTAA 59.444 37.037 0.00 0.00 0.00 2.24
2488 3533 8.113462 AGGCAATTACTCCCTATTTGAACTAAA 58.887 33.333 0.00 0.00 0.00 1.85
2489 3534 8.745590 GGCAATTACTCCCTATTTGAACTAAAA 58.254 33.333 0.00 0.00 0.00 1.52
2490 3535 9.569167 GCAATTACTCCCTATTTGAACTAAAAC 57.431 33.333 0.00 0.00 0.00 2.43
2492 3537 9.816787 AATTACTCCCTATTTGAACTAAAACCA 57.183 29.630 0.00 0.00 0.00 3.67
2493 3538 9.990868 ATTACTCCCTATTTGAACTAAAACCAT 57.009 29.630 0.00 0.00 0.00 3.55
2494 3539 7.703058 ACTCCCTATTTGAACTAAAACCATG 57.297 36.000 0.00 0.00 0.00 3.66
2495 3540 7.466804 ACTCCCTATTTGAACTAAAACCATGA 58.533 34.615 0.00 0.00 0.00 3.07
2496 3541 7.393515 ACTCCCTATTTGAACTAAAACCATGAC 59.606 37.037 0.00 0.00 0.00 3.06
2497 3542 6.373216 TCCCTATTTGAACTAAAACCATGACG 59.627 38.462 0.00 0.00 0.00 4.35
2498 3543 6.373216 CCCTATTTGAACTAAAACCATGACGA 59.627 38.462 0.00 0.00 0.00 4.20
2499 3544 7.414098 CCCTATTTGAACTAAAACCATGACGAG 60.414 40.741 0.00 0.00 0.00 4.18
2500 3545 6.877611 ATTTGAACTAAAACCATGACGAGT 57.122 33.333 0.00 0.00 0.00 4.18
2501 3546 7.972832 ATTTGAACTAAAACCATGACGAGTA 57.027 32.000 0.00 0.00 0.00 2.59
2502 3547 7.789273 TTTGAACTAAAACCATGACGAGTAA 57.211 32.000 0.00 0.00 0.00 2.24
2503 3548 7.789273 TTGAACTAAAACCATGACGAGTAAA 57.211 32.000 0.00 0.00 0.00 2.01
2504 3549 7.972832 TGAACTAAAACCATGACGAGTAAAT 57.027 32.000 0.00 0.00 0.00 1.40
2505 3550 8.385898 TGAACTAAAACCATGACGAGTAAATT 57.614 30.769 0.00 0.00 0.00 1.82
2506 3551 8.286800 TGAACTAAAACCATGACGAGTAAATTG 58.713 33.333 0.00 0.00 0.00 2.32
2507 3552 7.141100 ACTAAAACCATGACGAGTAAATTGG 57.859 36.000 0.00 0.00 0.00 3.16
2508 3553 6.938030 ACTAAAACCATGACGAGTAAATTGGA 59.062 34.615 0.00 0.00 0.00 3.53
2509 3554 6.642707 AAAACCATGACGAGTAAATTGGAA 57.357 33.333 0.00 0.00 0.00 3.53
2510 3555 5.622770 AACCATGACGAGTAAATTGGAAC 57.377 39.130 0.00 0.00 0.00 3.62
2511 3556 3.682858 ACCATGACGAGTAAATTGGAACG 59.317 43.478 0.00 0.00 0.00 3.95
2512 3557 3.063452 CCATGACGAGTAAATTGGAACGG 59.937 47.826 0.00 0.00 0.00 4.44
2513 3558 3.663995 TGACGAGTAAATTGGAACGGA 57.336 42.857 0.00 0.00 0.00 4.69
2514 3559 3.581755 TGACGAGTAAATTGGAACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
2515 3560 2.928116 GACGAGTAAATTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
2516 3561 2.564062 ACGAGTAAATTGGAACGGAGGA 59.436 45.455 0.00 0.00 0.00 3.71
2517 3562 3.007182 ACGAGTAAATTGGAACGGAGGAA 59.993 43.478 0.00 0.00 0.00 3.36
2518 3563 3.617263 CGAGTAAATTGGAACGGAGGAAG 59.383 47.826 0.00 0.00 0.00 3.46
2519 3564 4.576879 GAGTAAATTGGAACGGAGGAAGT 58.423 43.478 0.00 0.00 0.00 3.01
2563 3608 7.432148 TCCCTCTGTAAATAAGCATAAGACA 57.568 36.000 0.00 0.00 0.00 3.41
2574 3619 9.884465 AAATAAGCATAAGACATTTTAGATCGC 57.116 29.630 0.00 0.00 0.00 4.58
2575 3620 8.839310 ATAAGCATAAGACATTTTAGATCGCT 57.161 30.769 0.00 0.00 0.00 4.93
2576 3621 9.929180 ATAAGCATAAGACATTTTAGATCGCTA 57.071 29.630 0.00 0.00 0.00 4.26
2622 3667 8.108551 GTAATACTACTGTAGTACCTCATGGG 57.891 42.308 25.42 0.00 43.46 4.00
2623 3668 3.912248 ACTACTGTAGTACCTCATGGGG 58.088 50.000 18.42 11.11 37.23 4.96
2624 3669 2.942604 ACTGTAGTACCTCATGGGGT 57.057 50.000 23.68 23.68 42.86 4.95
2625 3670 2.748388 ACTGTAGTACCTCATGGGGTC 58.252 52.381 23.92 13.28 40.48 4.46
2626 3671 2.315155 ACTGTAGTACCTCATGGGGTCT 59.685 50.000 23.92 19.78 40.48 3.85
2627 3672 2.959707 CTGTAGTACCTCATGGGGTCTC 59.040 54.545 23.92 15.95 40.48 3.36
2628 3673 2.313643 TGTAGTACCTCATGGGGTCTCA 59.686 50.000 23.92 13.30 40.48 3.27
2629 3674 2.877154 AGTACCTCATGGGGTCTCAT 57.123 50.000 23.92 2.43 40.48 2.90
2630 3675 2.402564 AGTACCTCATGGGGTCTCATG 58.597 52.381 23.92 4.52 44.20 3.07
2636 3681 2.207988 TCATGGGGTCTCATGATTGGT 58.792 47.619 9.27 0.00 45.81 3.67
2637 3682 2.092267 TCATGGGGTCTCATGATTGGTG 60.092 50.000 9.27 0.00 45.81 4.17
2638 3683 1.667595 TGGGGTCTCATGATTGGTGA 58.332 50.000 0.00 0.00 0.00 4.02
2639 3684 1.561076 TGGGGTCTCATGATTGGTGAG 59.439 52.381 0.00 0.00 43.46 3.51
2640 3685 1.561542 GGGGTCTCATGATTGGTGAGT 59.438 52.381 0.00 0.00 42.82 3.41
2641 3686 2.771943 GGGGTCTCATGATTGGTGAGTA 59.228 50.000 0.00 0.00 42.82 2.59
2642 3687 3.181461 GGGGTCTCATGATTGGTGAGTAG 60.181 52.174 0.00 0.00 42.82 2.57
2643 3688 3.452627 GGGTCTCATGATTGGTGAGTAGT 59.547 47.826 0.00 0.00 42.82 2.73
2644 3689 4.080863 GGGTCTCATGATTGGTGAGTAGTT 60.081 45.833 0.00 0.00 42.82 2.24
2645 3690 5.112686 GGTCTCATGATTGGTGAGTAGTTC 58.887 45.833 0.00 0.00 42.82 3.01
2646 3691 5.337571 GGTCTCATGATTGGTGAGTAGTTCA 60.338 44.000 0.00 0.00 42.82 3.18
2647 3692 6.166279 GTCTCATGATTGGTGAGTAGTTCAA 58.834 40.000 0.00 0.00 42.82 2.69
2648 3693 6.820656 GTCTCATGATTGGTGAGTAGTTCAAT 59.179 38.462 0.00 0.00 42.82 2.57
2649 3694 7.981789 GTCTCATGATTGGTGAGTAGTTCAATA 59.018 37.037 0.00 0.00 42.82 1.90
2650 3695 8.708378 TCTCATGATTGGTGAGTAGTTCAATAT 58.292 33.333 0.00 0.00 42.82 1.28
2651 3696 8.667076 TCATGATTGGTGAGTAGTTCAATATG 57.333 34.615 0.00 0.00 37.61 1.78
2652 3697 7.716560 TCATGATTGGTGAGTAGTTCAATATGG 59.283 37.037 0.00 0.00 37.61 2.74
2653 3698 6.957631 TGATTGGTGAGTAGTTCAATATGGT 58.042 36.000 0.00 0.00 37.61 3.55
2654 3699 7.047891 TGATTGGTGAGTAGTTCAATATGGTC 58.952 38.462 0.00 0.00 37.61 4.02
2655 3700 6.620877 TTGGTGAGTAGTTCAATATGGTCT 57.379 37.500 0.00 0.00 37.61 3.85
2656 3701 7.727578 TTGGTGAGTAGTTCAATATGGTCTA 57.272 36.000 0.00 0.00 37.61 2.59
2657 3702 7.727578 TGGTGAGTAGTTCAATATGGTCTAA 57.272 36.000 0.00 0.00 37.61 2.10
2658 3703 8.319057 TGGTGAGTAGTTCAATATGGTCTAAT 57.681 34.615 0.00 0.00 37.61 1.73
2659 3704 8.768397 TGGTGAGTAGTTCAATATGGTCTAATT 58.232 33.333 0.00 0.00 37.61 1.40
2660 3705 9.046296 GGTGAGTAGTTCAATATGGTCTAATTG 57.954 37.037 0.00 0.00 37.61 2.32
2661 3706 9.601217 GTGAGTAGTTCAATATGGTCTAATTGT 57.399 33.333 0.00 0.00 37.61 2.71
2667 3712 9.920946 AGTTCAATATGGTCTAATTGTATTGGT 57.079 29.630 0.00 0.00 34.89 3.67
2674 3719 7.399245 TGGTCTAATTGTATTGGTTTTAGCC 57.601 36.000 0.00 0.00 0.00 3.93
2675 3720 7.179269 TGGTCTAATTGTATTGGTTTTAGCCT 58.821 34.615 0.00 0.00 0.00 4.58
2676 3721 7.122055 TGGTCTAATTGTATTGGTTTTAGCCTG 59.878 37.037 0.00 0.00 0.00 4.85
2677 3722 7.338449 GGTCTAATTGTATTGGTTTTAGCCTGA 59.662 37.037 0.00 0.00 0.00 3.86
2678 3723 8.903820 GTCTAATTGTATTGGTTTTAGCCTGAT 58.096 33.333 0.00 0.00 0.00 2.90
2679 3724 9.474313 TCTAATTGTATTGGTTTTAGCCTGATT 57.526 29.630 0.00 0.00 0.00 2.57
2682 3727 9.791801 AATTGTATTGGTTTTAGCCTGATTTTT 57.208 25.926 0.00 0.00 0.00 1.94
2683 3728 8.600449 TTGTATTGGTTTTAGCCTGATTTTTG 57.400 30.769 0.00 0.00 0.00 2.44
2684 3729 7.158021 TGTATTGGTTTTAGCCTGATTTTTGG 58.842 34.615 0.00 0.00 0.00 3.28
2685 3730 5.622346 TTGGTTTTAGCCTGATTTTTGGT 57.378 34.783 0.00 0.00 0.00 3.67
2686 3731 6.732896 TTGGTTTTAGCCTGATTTTTGGTA 57.267 33.333 0.00 0.00 0.00 3.25
2687 3732 6.732896 TGGTTTTAGCCTGATTTTTGGTAA 57.267 33.333 0.00 0.00 0.00 2.85
2688 3733 7.125792 TGGTTTTAGCCTGATTTTTGGTAAA 57.874 32.000 0.00 0.00 0.00 2.01
2689 3734 7.740805 TGGTTTTAGCCTGATTTTTGGTAAAT 58.259 30.769 0.00 0.00 0.00 1.40
2690 3735 8.214364 TGGTTTTAGCCTGATTTTTGGTAAATT 58.786 29.630 0.00 0.00 0.00 1.82
2691 3736 9.713713 GGTTTTAGCCTGATTTTTGGTAAATTA 57.286 29.630 0.00 0.00 0.00 1.40
2695 3740 9.921637 TTAGCCTGATTTTTGGTAAATTAACTG 57.078 29.630 0.00 0.00 0.00 3.16
2696 3741 7.386059 AGCCTGATTTTTGGTAAATTAACTGG 58.614 34.615 0.00 0.00 0.00 4.00
2697 3742 6.593770 GCCTGATTTTTGGTAAATTAACTGGG 59.406 38.462 0.00 0.00 0.00 4.45
2698 3743 6.593770 CCTGATTTTTGGTAAATTAACTGGGC 59.406 38.462 0.00 0.00 0.00 5.36
2699 3744 7.067496 TGATTTTTGGTAAATTAACTGGGCA 57.933 32.000 0.00 0.00 0.00 5.36
2700 3745 7.509546 TGATTTTTGGTAAATTAACTGGGCAA 58.490 30.769 0.00 0.00 0.00 4.52
2701 3746 8.160106 TGATTTTTGGTAAATTAACTGGGCAAT 58.840 29.630 0.00 0.00 0.00 3.56
2702 3747 8.932434 ATTTTTGGTAAATTAACTGGGCAATT 57.068 26.923 0.00 0.00 0.00 2.32
2703 3748 7.971183 TTTTGGTAAATTAACTGGGCAATTC 57.029 32.000 0.00 0.00 0.00 2.17
2704 3749 6.926630 TTGGTAAATTAACTGGGCAATTCT 57.073 33.333 0.00 0.00 0.00 2.40
2705 3750 6.926630 TGGTAAATTAACTGGGCAATTCTT 57.073 33.333 0.00 0.00 0.00 2.52
2706 3751 7.309770 TGGTAAATTAACTGGGCAATTCTTT 57.690 32.000 0.00 0.00 0.00 2.52
2707 3752 7.382898 TGGTAAATTAACTGGGCAATTCTTTC 58.617 34.615 0.00 0.00 0.00 2.62
2708 3753 7.234577 TGGTAAATTAACTGGGCAATTCTTTCT 59.765 33.333 0.00 0.00 0.00 2.52
2709 3754 8.094548 GGTAAATTAACTGGGCAATTCTTTCTT 58.905 33.333 0.00 0.00 0.00 2.52
2710 3755 9.489084 GTAAATTAACTGGGCAATTCTTTCTTT 57.511 29.630 0.00 0.00 0.00 2.52
2711 3756 8.978874 AAATTAACTGGGCAATTCTTTCTTTT 57.021 26.923 0.00 0.00 0.00 2.27
2712 3757 8.607441 AATTAACTGGGCAATTCTTTCTTTTC 57.393 30.769 0.00 0.00 0.00 2.29
2713 3758 5.876651 AACTGGGCAATTCTTTCTTTTCT 57.123 34.783 0.00 0.00 0.00 2.52
2714 3759 5.876651 ACTGGGCAATTCTTTCTTTTCTT 57.123 34.783 0.00 0.00 0.00 2.52
2715 3760 5.847304 ACTGGGCAATTCTTTCTTTTCTTC 58.153 37.500 0.00 0.00 0.00 2.87
2716 3761 5.600069 ACTGGGCAATTCTTTCTTTTCTTCT 59.400 36.000 0.00 0.00 0.00 2.85
2717 3762 6.098838 ACTGGGCAATTCTTTCTTTTCTTCTT 59.901 34.615 0.00 0.00 0.00 2.52
2718 3763 6.282930 TGGGCAATTCTTTCTTTTCTTCTTG 58.717 36.000 0.00 0.00 0.00 3.02
2719 3764 6.098124 TGGGCAATTCTTTCTTTTCTTCTTGA 59.902 34.615 0.00 0.00 0.00 3.02
2720 3765 7.157347 GGGCAATTCTTTCTTTTCTTCTTGAT 58.843 34.615 0.00 0.00 0.00 2.57
2721 3766 7.658982 GGGCAATTCTTTCTTTTCTTCTTGATT 59.341 33.333 0.00 0.00 0.00 2.57
2722 3767 9.696917 GGCAATTCTTTCTTTTCTTCTTGATTA 57.303 29.630 0.00 0.00 0.00 1.75
2733 3778 9.219497 CTTTTCTTCTTGATTAATCGATGAAGC 57.781 33.333 24.54 3.66 32.05 3.86
2734 3779 7.848223 TTCTTCTTGATTAATCGATGAAGCA 57.152 32.000 24.54 9.43 32.05 3.91
2735 3780 7.848223 TCTTCTTGATTAATCGATGAAGCAA 57.152 32.000 21.82 21.82 32.05 3.91
2736 3781 7.688372 TCTTCTTGATTAATCGATGAAGCAAC 58.312 34.615 19.89 4.05 32.05 4.17
2737 3782 7.550551 TCTTCTTGATTAATCGATGAAGCAACT 59.449 33.333 19.89 0.00 32.05 3.16
2738 3783 7.239166 TCTTGATTAATCGATGAAGCAACTC 57.761 36.000 19.89 4.38 28.72 3.01
2739 3784 7.044181 TCTTGATTAATCGATGAAGCAACTCT 58.956 34.615 19.89 0.00 28.72 3.24
2740 3785 7.550551 TCTTGATTAATCGATGAAGCAACTCTT 59.449 33.333 19.89 0.00 37.83 2.85
2741 3786 7.615582 TGATTAATCGATGAAGCAACTCTTT 57.384 32.000 11.06 0.00 34.56 2.52
2742 3787 8.044060 TGATTAATCGATGAAGCAACTCTTTT 57.956 30.769 11.06 0.00 34.56 2.27
2743 3788 7.964559 TGATTAATCGATGAAGCAACTCTTTTG 59.035 33.333 11.06 0.00 34.56 2.44
2744 3789 3.542712 TCGATGAAGCAACTCTTTTGC 57.457 42.857 0.58 0.58 45.22 3.68
2745 3790 2.226437 TCGATGAAGCAACTCTTTTGCC 59.774 45.455 5.38 0.00 45.98 4.52
2746 3791 2.227388 CGATGAAGCAACTCTTTTGCCT 59.773 45.455 5.38 0.00 45.98 4.75
2747 3792 3.669023 CGATGAAGCAACTCTTTTGCCTC 60.669 47.826 5.38 3.27 45.98 4.70
2748 3793 1.956477 TGAAGCAACTCTTTTGCCTCC 59.044 47.619 5.38 0.00 45.98 4.30
2749 3794 1.956477 GAAGCAACTCTTTTGCCTCCA 59.044 47.619 5.38 0.00 45.98 3.86
2750 3795 2.299326 AGCAACTCTTTTGCCTCCAT 57.701 45.000 5.38 0.00 45.98 3.41
2751 3796 2.601905 AGCAACTCTTTTGCCTCCATT 58.398 42.857 5.38 0.00 45.98 3.16
2752 3797 2.967887 AGCAACTCTTTTGCCTCCATTT 59.032 40.909 5.38 0.00 45.98 2.32
2753 3798 3.006217 AGCAACTCTTTTGCCTCCATTTC 59.994 43.478 5.38 0.00 45.98 2.17
2754 3799 3.568538 CAACTCTTTTGCCTCCATTTCG 58.431 45.455 0.00 0.00 0.00 3.46
2755 3800 2.162681 ACTCTTTTGCCTCCATTTCGG 58.837 47.619 0.00 0.00 0.00 4.30
2756 3801 1.474077 CTCTTTTGCCTCCATTTCGGG 59.526 52.381 0.00 0.00 34.36 5.14
2757 3802 1.074727 TCTTTTGCCTCCATTTCGGGA 59.925 47.619 0.00 0.00 34.36 5.14
2758 3803 1.892474 CTTTTGCCTCCATTTCGGGAA 59.108 47.619 0.00 0.00 36.27 3.97
2759 3804 2.002505 TTTGCCTCCATTTCGGGAAA 57.997 45.000 0.00 0.00 38.12 3.13
2760 3805 2.002505 TTGCCTCCATTTCGGGAAAA 57.997 45.000 0.00 0.00 36.27 2.29
2761 3806 2.002505 TGCCTCCATTTCGGGAAAAA 57.997 45.000 0.00 0.00 36.27 1.94
2800 3845 2.801859 CCGGTAAAAATCGGCCCAT 58.198 52.632 0.00 0.00 39.78 4.00
3051 4110 2.420890 CTCCTCTCCTCATGCCGC 59.579 66.667 0.00 0.00 0.00 6.53
3055 4114 3.068064 TCTCCTCATGCCGCGTGA 61.068 61.111 14.54 14.54 0.00 4.35
3082 4141 3.128188 CAGGAGCAGCAGCAGCAG 61.128 66.667 12.92 0.00 45.49 4.24
3084 4143 2.359602 GGAGCAGCAGCAGCAGAA 60.360 61.111 12.92 0.00 45.49 3.02
3086 4145 1.964891 GAGCAGCAGCAGCAGAACA 60.965 57.895 12.92 0.00 45.49 3.18
3087 4146 1.913451 GAGCAGCAGCAGCAGAACAG 61.913 60.000 12.92 0.00 45.49 3.16
3088 4147 2.561885 CAGCAGCAGCAGAACAGC 59.438 61.111 3.17 0.00 45.49 4.40
3089 4148 2.112507 AGCAGCAGCAGAACAGCA 59.887 55.556 3.17 0.00 45.49 4.41
3090 4149 1.966972 AGCAGCAGCAGAACAGCAG 60.967 57.895 3.17 0.00 45.49 4.24
3091 4150 2.561885 CAGCAGCAGAACAGCAGC 59.438 61.111 0.00 0.00 45.99 5.25
3093 4152 4.099170 GCAGCAGAACAGCAGCGG 62.099 66.667 0.00 0.00 37.29 5.52
3094 4153 4.099170 CAGCAGAACAGCAGCGGC 62.099 66.667 0.00 0.00 41.61 6.53
3095 4154 4.631247 AGCAGAACAGCAGCGGCA 62.631 61.111 12.44 0.00 44.61 5.69
3096 4155 4.099170 GCAGAACAGCAGCGGCAG 62.099 66.667 12.44 5.49 44.61 4.85
3097 4156 4.099170 CAGAACAGCAGCGGCAGC 62.099 66.667 12.44 9.56 44.61 5.25
3219 4283 4.260620 CGCCTCCATCCAAAACGTAAATAG 60.261 45.833 0.00 0.00 0.00 1.73
3220 4284 4.638865 GCCTCCATCCAAAACGTAAATAGT 59.361 41.667 0.00 0.00 0.00 2.12
3221 4285 5.818857 GCCTCCATCCAAAACGTAAATAGTA 59.181 40.000 0.00 0.00 0.00 1.82
3222 4286 6.238293 GCCTCCATCCAAAACGTAAATAGTAC 60.238 42.308 0.00 0.00 0.00 2.73
3223 4287 7.046033 CCTCCATCCAAAACGTAAATAGTACT 58.954 38.462 0.00 0.00 0.00 2.73
3224 4288 7.224167 CCTCCATCCAAAACGTAAATAGTACTC 59.776 40.741 0.00 0.00 0.00 2.59
3225 4289 7.043565 TCCATCCAAAACGTAAATAGTACTCC 58.956 38.462 0.00 0.00 0.00 3.85
3226 4290 6.819649 CCATCCAAAACGTAAATAGTACTCCA 59.180 38.462 0.00 0.00 0.00 3.86
3227 4291 7.011109 CCATCCAAAACGTAAATAGTACTCCAG 59.989 40.741 0.00 0.00 0.00 3.86
3261 4325 5.375773 TCTCAAGTGTCAACATTCCATTCA 58.624 37.500 0.00 0.00 0.00 2.57
3363 4468 1.064946 GGACGAGATGGAGACGCTG 59.935 63.158 0.00 0.00 0.00 5.18
3510 4615 2.498466 GACGACGACGACCACGAC 60.498 66.667 15.32 0.00 42.66 4.34
3516 4621 2.477845 GACGACCACGACGACGAT 59.522 61.111 15.32 0.00 42.66 3.73
3780 4885 2.764128 ATCCCGTCCATGTCGCCT 60.764 61.111 0.00 0.00 0.00 5.52
4037 5144 4.847444 GGCGGGCTTGCTCTCTCC 62.847 72.222 0.00 0.00 34.52 3.71
4202 5309 6.888430 AGTATTCTGATCAACGTTTGTGAAC 58.112 36.000 0.00 0.00 0.00 3.18
4209 5319 6.252281 TGATCAACGTTTGTGAACAAGTAAC 58.748 36.000 0.00 0.00 37.15 2.50
4227 5337 9.256228 ACAAGTAACATCTCTCAAGGTCTATTA 57.744 33.333 0.00 0.00 0.00 0.98
4277 5387 1.507140 AACTCCTGGTGGACACTTCA 58.493 50.000 2.13 0.00 37.46 3.02
4360 5470 7.229707 GCATCTAGACTACAAGTTCCTCATCTA 59.770 40.741 0.00 0.00 0.00 1.98
4361 5471 8.564574 CATCTAGACTACAAGTTCCTCATCTAC 58.435 40.741 0.00 0.00 0.00 2.59
4362 5472 7.863722 TCTAGACTACAAGTTCCTCATCTACT 58.136 38.462 0.00 0.00 0.00 2.57
4363 5473 7.988599 TCTAGACTACAAGTTCCTCATCTACTC 59.011 40.741 0.00 0.00 0.00 2.59
4364 5474 5.889289 AGACTACAAGTTCCTCATCTACTCC 59.111 44.000 0.00 0.00 0.00 3.85
4365 5475 4.957327 ACTACAAGTTCCTCATCTACTCCC 59.043 45.833 0.00 0.00 0.00 4.30
4366 5476 4.067944 ACAAGTTCCTCATCTACTCCCT 57.932 45.455 0.00 0.00 0.00 4.20
4367 5477 4.027437 ACAAGTTCCTCATCTACTCCCTC 58.973 47.826 0.00 0.00 0.00 4.30
4368 5478 3.322191 AGTTCCTCATCTACTCCCTCC 57.678 52.381 0.00 0.00 0.00 4.30
4369 5479 1.957877 GTTCCTCATCTACTCCCTCCG 59.042 57.143 0.00 0.00 0.00 4.63
4370 5480 1.223501 TCCTCATCTACTCCCTCCGT 58.776 55.000 0.00 0.00 0.00 4.69
4371 5481 1.569548 TCCTCATCTACTCCCTCCGTT 59.430 52.381 0.00 0.00 0.00 4.44
4372 5482 1.957877 CCTCATCTACTCCCTCCGTTC 59.042 57.143 0.00 0.00 0.00 3.95
4373 5483 1.957877 CTCATCTACTCCCTCCGTTCC 59.042 57.143 0.00 0.00 0.00 3.62
4374 5484 1.286849 TCATCTACTCCCTCCGTTCCA 59.713 52.381 0.00 0.00 0.00 3.53
4375 5485 2.108168 CATCTACTCCCTCCGTTCCAA 58.892 52.381 0.00 0.00 0.00 3.53
4376 5486 2.314071 TCTACTCCCTCCGTTCCAAA 57.686 50.000 0.00 0.00 0.00 3.28
4377 5487 2.612000 TCTACTCCCTCCGTTCCAAAA 58.388 47.619 0.00 0.00 0.00 2.44
4378 5488 3.178865 TCTACTCCCTCCGTTCCAAAAT 58.821 45.455 0.00 0.00 0.00 1.82
4379 5489 4.355549 TCTACTCCCTCCGTTCCAAAATA 58.644 43.478 0.00 0.00 0.00 1.40
4380 5490 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
4381 5491 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
4382 5492 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
4383 5493 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
4384 5494 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
4385 5495 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
4386 5496 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
4387 5497 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
4388 5498 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
4389 5499 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
4390 5500 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
4391 5501 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
4392 5502 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
4393 5503 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
4394 5504 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
4395 5505 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
4396 5506 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
4397 5507 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
4398 5508 7.176690 CCAAAATAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
4399 5509 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
4400 5510 9.802039 AAAATAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
4401 5511 8.788325 AATAGATGACCCAACTTTGTACTAAC 57.212 34.615 0.00 0.00 0.00 2.34
4402 5512 6.435292 AGATGACCCAACTTTGTACTAACT 57.565 37.500 0.00 0.00 0.00 2.24
4403 5513 6.838382 AGATGACCCAACTTTGTACTAACTT 58.162 36.000 0.00 0.00 0.00 2.66
4404 5514 7.287810 AGATGACCCAACTTTGTACTAACTTT 58.712 34.615 0.00 0.00 0.00 2.66
4405 5515 6.687081 TGACCCAACTTTGTACTAACTTTG 57.313 37.500 0.00 0.00 0.00 2.77
4406 5516 6.181908 TGACCCAACTTTGTACTAACTTTGT 58.818 36.000 0.00 0.00 0.00 2.83
4407 5517 7.337167 TGACCCAACTTTGTACTAACTTTGTA 58.663 34.615 0.00 0.00 0.00 2.41
4408 5518 7.280652 TGACCCAACTTTGTACTAACTTTGTAC 59.719 37.037 6.58 6.58 40.27 2.90
4409 5519 7.341030 ACCCAACTTTGTACTAACTTTGTACT 58.659 34.615 12.73 0.00 40.44 2.73
4410 5520 8.485392 ACCCAACTTTGTACTAACTTTGTACTA 58.515 33.333 12.73 4.86 40.44 1.82
4411 5521 9.328845 CCCAACTTTGTACTAACTTTGTACTAA 57.671 33.333 12.73 10.75 40.44 2.24
4447 5557 8.480643 AAGTTGAGTCATCTATTTTAGAACGG 57.519 34.615 4.14 0.00 38.50 4.44
4448 5558 7.837863 AGTTGAGTCATCTATTTTAGAACGGA 58.162 34.615 1.70 0.00 38.50 4.69
4449 5559 7.976734 AGTTGAGTCATCTATTTTAGAACGGAG 59.023 37.037 1.70 0.00 38.50 4.63
4450 5560 6.806751 TGAGTCATCTATTTTAGAACGGAGG 58.193 40.000 0.00 0.00 38.50 4.30
4451 5561 6.163135 AGTCATCTATTTTAGAACGGAGGG 57.837 41.667 0.00 0.00 38.50 4.30
4452 5562 5.897824 AGTCATCTATTTTAGAACGGAGGGA 59.102 40.000 0.00 0.00 38.50 4.20
4453 5563 6.041069 AGTCATCTATTTTAGAACGGAGGGAG 59.959 42.308 0.00 0.00 38.50 4.30
4454 5564 5.897824 TCATCTATTTTAGAACGGAGGGAGT 59.102 40.000 0.00 0.00 38.50 3.85
4469 5579 6.015350 ACGGAGGGAGTAATAATGTAGACATG 60.015 42.308 0.00 0.00 36.56 3.21
4819 5929 8.445275 TCATTTTGCAGTAAGACTCAGTTTAA 57.555 30.769 0.00 0.00 0.00 1.52
4820 5930 9.066892 TCATTTTGCAGTAAGACTCAGTTTAAT 57.933 29.630 0.00 0.00 0.00 1.40
4873 5983 6.630443 GCACTCTTAAGAATATCATTGTTGCG 59.370 38.462 6.63 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 2.169146 GTACCCATTTCGTCCGCCG 61.169 63.158 0.00 0.00 38.13 6.46
12 13 1.816679 GGTACCCATTTCGTCCGCC 60.817 63.158 0.00 0.00 0.00 6.13
13 14 1.087771 CAGGTACCCATTTCGTCCGC 61.088 60.000 8.74 0.00 0.00 5.54
14 15 1.087771 GCAGGTACCCATTTCGTCCG 61.088 60.000 8.74 0.00 0.00 4.79
15 16 1.087771 CGCAGGTACCCATTTCGTCC 61.088 60.000 8.74 0.00 0.00 4.79
16 17 0.390735 ACGCAGGTACCCATTTCGTC 60.391 55.000 8.74 0.00 0.00 4.20
17 18 0.035739 AACGCAGGTACCCATTTCGT 59.964 50.000 8.74 8.38 0.00 3.85
18 19 0.446222 CAACGCAGGTACCCATTTCG 59.554 55.000 8.74 7.73 0.00 3.46
19 20 0.808755 CCAACGCAGGTACCCATTTC 59.191 55.000 8.74 0.00 0.00 2.17
20 21 0.402504 TCCAACGCAGGTACCCATTT 59.597 50.000 8.74 0.00 0.00 2.32
21 22 0.035439 CTCCAACGCAGGTACCCATT 60.035 55.000 8.74 0.00 0.00 3.16
22 23 1.198759 ACTCCAACGCAGGTACCCAT 61.199 55.000 8.74 0.00 0.00 4.00
23 24 1.412453 AACTCCAACGCAGGTACCCA 61.412 55.000 8.74 0.00 0.00 4.51
24 25 0.953960 CAACTCCAACGCAGGTACCC 60.954 60.000 8.74 0.00 0.00 3.69
25 26 1.574702 GCAACTCCAACGCAGGTACC 61.575 60.000 2.73 2.73 0.00 3.34
26 27 0.602905 AGCAACTCCAACGCAGGTAC 60.603 55.000 0.00 0.00 0.00 3.34
27 28 0.320421 GAGCAACTCCAACGCAGGTA 60.320 55.000 0.00 0.00 0.00 3.08
28 29 1.598130 GAGCAACTCCAACGCAGGT 60.598 57.895 0.00 0.00 0.00 4.00
29 30 0.886490 AAGAGCAACTCCAACGCAGG 60.886 55.000 0.00 0.00 0.00 4.85
30 31 1.461127 GTAAGAGCAACTCCAACGCAG 59.539 52.381 0.00 0.00 0.00 5.18
31 32 1.070134 AGTAAGAGCAACTCCAACGCA 59.930 47.619 0.00 0.00 0.00 5.24
32 33 1.461127 CAGTAAGAGCAACTCCAACGC 59.539 52.381 0.00 0.00 0.00 4.84
33 34 2.731976 GACAGTAAGAGCAACTCCAACG 59.268 50.000 0.00 0.00 0.00 4.10
34 35 2.731976 CGACAGTAAGAGCAACTCCAAC 59.268 50.000 0.00 0.00 0.00 3.77
35 36 2.626266 TCGACAGTAAGAGCAACTCCAA 59.374 45.455 0.00 0.00 0.00 3.53
36 37 2.030185 GTCGACAGTAAGAGCAACTCCA 60.030 50.000 11.55 0.00 0.00 3.86
37 38 2.229302 AGTCGACAGTAAGAGCAACTCC 59.771 50.000 19.50 0.00 0.00 3.85
38 39 3.562567 AGTCGACAGTAAGAGCAACTC 57.437 47.619 19.50 0.00 0.00 3.01
39 40 3.120269 CGTAGTCGACAGTAAGAGCAACT 60.120 47.826 19.50 0.00 39.71 3.16
40 41 3.120408 TCGTAGTCGACAGTAAGAGCAAC 60.120 47.826 19.50 0.00 41.35 4.17
41 42 3.069289 TCGTAGTCGACAGTAAGAGCAA 58.931 45.455 19.50 0.00 41.35 3.91
42 43 2.691927 TCGTAGTCGACAGTAAGAGCA 58.308 47.619 19.50 0.00 41.35 4.26
43 44 3.370366 TCTTCGTAGTCGACAGTAAGAGC 59.630 47.826 19.50 0.00 46.03 4.09
44 45 5.527511 TTCTTCGTAGTCGACAGTAAGAG 57.472 43.478 19.50 8.26 46.03 2.85
45 46 4.142945 GCTTCTTCGTAGTCGACAGTAAGA 60.143 45.833 19.50 16.51 46.03 2.10
46 47 4.090034 GCTTCTTCGTAGTCGACAGTAAG 58.910 47.826 19.50 14.59 46.03 2.34
51 52 1.199327 CAGGCTTCTTCGTAGTCGACA 59.801 52.381 19.50 0.48 46.03 4.35
58 59 1.241165 TCGTCACAGGCTTCTTCGTA 58.759 50.000 0.00 0.00 0.00 3.43
61 62 3.251004 ACAAATTCGTCACAGGCTTCTTC 59.749 43.478 0.00 0.00 0.00 2.87
66 67 1.603802 CACACAAATTCGTCACAGGCT 59.396 47.619 0.00 0.00 0.00 4.58
69 70 1.003972 ACGCACACAAATTCGTCACAG 60.004 47.619 0.00 0.00 0.00 3.66
104 105 3.072476 TCCCTTCTCATGTCTCCGTTTTT 59.928 43.478 0.00 0.00 0.00 1.94
109 110 2.497675 TCTTTCCCTTCTCATGTCTCCG 59.502 50.000 0.00 0.00 0.00 4.63
119 120 0.606673 GCCGTTGCTCTTTCCCTTCT 60.607 55.000 0.00 0.00 33.53 2.85
132 133 3.353836 CACAACCCGGAGCCGTTG 61.354 66.667 16.77 16.77 37.81 4.10
240 243 1.551908 GGATGGCCCATTTGCAACCA 61.552 55.000 8.05 8.05 34.14 3.67
376 379 1.638133 CAGATCAGAGTCGTGCTTGG 58.362 55.000 0.00 0.00 0.00 3.61
464 471 1.279271 GTAGGGGAGTGTGCAGTGATT 59.721 52.381 0.00 0.00 0.00 2.57
572 583 2.636830 CATCCGGAGCACTGAGAAATT 58.363 47.619 11.34 0.00 0.00 1.82
643 659 0.100325 TCGCACCACAAGCAAACAAG 59.900 50.000 0.00 0.00 0.00 3.16
702 1537 3.375299 CCGTGGAGAACTGGAATCATTTC 59.625 47.826 0.00 0.00 34.13 2.17
729 1565 5.237779 TCGTTGTCCAAGATAGAAACCAAAC 59.762 40.000 0.00 0.00 0.00 2.93
740 1576 3.393800 CTGTCTTGTCGTTGTCCAAGAT 58.606 45.455 5.49 0.00 46.20 2.40
741 1577 2.483013 CCTGTCTTGTCGTTGTCCAAGA 60.483 50.000 0.00 0.00 43.47 3.02
742 1578 1.867233 CCTGTCTTGTCGTTGTCCAAG 59.133 52.381 0.00 0.00 39.50 3.61
743 1579 1.483004 TCCTGTCTTGTCGTTGTCCAA 59.517 47.619 0.00 0.00 0.00 3.53
745 1581 1.784525 CTCCTGTCTTGTCGTTGTCC 58.215 55.000 0.00 0.00 0.00 4.02
747 1583 0.249911 GGCTCCTGTCTTGTCGTTGT 60.250 55.000 0.00 0.00 0.00 3.32
748 1584 0.951040 GGGCTCCTGTCTTGTCGTTG 60.951 60.000 0.00 0.00 0.00 4.10
751 1587 0.250295 TTTGGGCTCCTGTCTTGTCG 60.250 55.000 0.00 0.00 0.00 4.35
783 1623 5.407407 AAGAGCACGAGAAGGAAGAAATA 57.593 39.130 0.00 0.00 0.00 1.40
930 1770 3.684305 CACCGTTCAGCAGAAATGTATGA 59.316 43.478 0.00 0.00 35.08 2.15
1130 1971 3.315191 CACCATGGAATCACCCGTAATTC 59.685 47.826 21.47 0.00 38.00 2.17
1163 2004 4.628074 TCTTCACCTTCTGTAAAGAACGG 58.372 43.478 8.72 8.72 35.61 4.44
1165 2006 5.057149 TGCTCTTCACCTTCTGTAAAGAAC 58.943 41.667 0.00 0.00 0.00 3.01
1168 2009 5.300752 TCTTGCTCTTCACCTTCTGTAAAG 58.699 41.667 0.00 0.00 0.00 1.85
1172 2013 2.968574 TCTCTTGCTCTTCACCTTCTGT 59.031 45.455 0.00 0.00 0.00 3.41
1502 2515 3.147553 TGCCCAACTACAATGCTTACA 57.852 42.857 0.00 0.00 0.00 2.41
1514 2527 3.903714 AGCTTTAATTTCCTTGCCCAACT 59.096 39.130 0.00 0.00 0.00 3.16
1541 2554 4.383052 CAGCGTTACTACAAGACAAGACAG 59.617 45.833 0.00 0.00 0.00 3.51
1542 2555 4.202080 ACAGCGTTACTACAAGACAAGACA 60.202 41.667 0.00 0.00 0.00 3.41
1543 2556 4.296690 ACAGCGTTACTACAAGACAAGAC 58.703 43.478 0.00 0.00 0.00 3.01
1544 2557 4.543692 GACAGCGTTACTACAAGACAAGA 58.456 43.478 0.00 0.00 0.00 3.02
1545 2558 3.361053 CGACAGCGTTACTACAAGACAAG 59.639 47.826 0.00 0.00 0.00 3.16
1546 2559 3.302555 CGACAGCGTTACTACAAGACAA 58.697 45.455 0.00 0.00 0.00 3.18
1609 2622 3.745803 GCCTGCAGCCTCACAAGC 61.746 66.667 8.66 0.00 34.35 4.01
1916 2934 1.906966 GCAAATCATTCGCACGTTCAG 59.093 47.619 0.00 0.00 0.00 3.02
2169 3212 9.886132 ACGGAGTAAAATAAATGAATCTACACT 57.114 29.630 0.00 0.00 41.94 3.55
2190 3233 7.499321 AGTCTTTCTAGTGATACATACGGAG 57.501 40.000 0.00 0.00 0.00 4.63
2191 3234 7.660617 CCTAGTCTTTCTAGTGATACATACGGA 59.339 40.741 0.00 0.00 43.23 4.69
2192 3235 7.660617 TCCTAGTCTTTCTAGTGATACATACGG 59.339 40.741 0.00 0.00 43.23 4.02
2193 3236 8.604640 TCCTAGTCTTTCTAGTGATACATACG 57.395 38.462 0.00 0.00 43.23 3.06
2195 3238 9.053840 CGTTCCTAGTCTTTCTAGTGATACATA 57.946 37.037 0.00 0.00 43.23 2.29
2196 3239 7.013464 CCGTTCCTAGTCTTTCTAGTGATACAT 59.987 40.741 0.00 0.00 43.23 2.29
2197 3240 6.318144 CCGTTCCTAGTCTTTCTAGTGATACA 59.682 42.308 0.00 0.00 43.23 2.29
2198 3241 6.541641 TCCGTTCCTAGTCTTTCTAGTGATAC 59.458 42.308 0.00 0.00 43.23 2.24
2199 3242 6.656902 TCCGTTCCTAGTCTTTCTAGTGATA 58.343 40.000 0.00 0.00 43.23 2.15
2200 3243 5.507637 TCCGTTCCTAGTCTTTCTAGTGAT 58.492 41.667 0.00 0.00 43.23 3.06
2201 3244 4.914983 TCCGTTCCTAGTCTTTCTAGTGA 58.085 43.478 0.00 0.00 43.23 3.41
2202 3245 4.096682 CCTCCGTTCCTAGTCTTTCTAGTG 59.903 50.000 0.00 0.00 43.23 2.74
2203 3246 4.271661 CCTCCGTTCCTAGTCTTTCTAGT 58.728 47.826 0.00 0.00 43.23 2.57
2204 3247 3.633065 CCCTCCGTTCCTAGTCTTTCTAG 59.367 52.174 0.00 0.00 44.07 2.43
2205 3248 3.267812 TCCCTCCGTTCCTAGTCTTTCTA 59.732 47.826 0.00 0.00 0.00 2.10
2206 3249 2.042706 TCCCTCCGTTCCTAGTCTTTCT 59.957 50.000 0.00 0.00 0.00 2.52
2207 3250 2.427812 CTCCCTCCGTTCCTAGTCTTTC 59.572 54.545 0.00 0.00 0.00 2.62
2208 3251 2.225318 ACTCCCTCCGTTCCTAGTCTTT 60.225 50.000 0.00 0.00 0.00 2.52
2209 3252 1.358445 ACTCCCTCCGTTCCTAGTCTT 59.642 52.381 0.00 0.00 0.00 3.01
2210 3253 1.001282 ACTCCCTCCGTTCCTAGTCT 58.999 55.000 0.00 0.00 0.00 3.24
2211 3254 2.092484 ACTACTCCCTCCGTTCCTAGTC 60.092 54.545 0.00 0.00 0.00 2.59
2212 3255 1.921748 ACTACTCCCTCCGTTCCTAGT 59.078 52.381 0.00 0.00 0.00 2.57
2213 3256 2.732844 ACTACTCCCTCCGTTCCTAG 57.267 55.000 0.00 0.00 0.00 3.02
2214 3257 2.158900 CGTACTACTCCCTCCGTTCCTA 60.159 54.545 0.00 0.00 0.00 2.94
2215 3258 1.407989 CGTACTACTCCCTCCGTTCCT 60.408 57.143 0.00 0.00 0.00 3.36
2216 3259 1.020437 CGTACTACTCCCTCCGTTCC 58.980 60.000 0.00 0.00 0.00 3.62
2217 3260 1.743996 ACGTACTACTCCCTCCGTTC 58.256 55.000 0.00 0.00 0.00 3.95
2218 3261 2.027192 TGTACGTACTACTCCCTCCGTT 60.027 50.000 25.12 0.00 0.00 4.44
2219 3262 1.555075 TGTACGTACTACTCCCTCCGT 59.445 52.381 25.12 0.00 0.00 4.69
2220 3263 2.315925 TGTACGTACTACTCCCTCCG 57.684 55.000 25.12 0.00 0.00 4.63
2221 3264 2.292845 GCATGTACGTACTACTCCCTCC 59.707 54.545 25.12 0.00 0.00 4.30
2222 3265 2.947652 TGCATGTACGTACTACTCCCTC 59.052 50.000 25.12 7.54 0.00 4.30
2223 3266 3.008835 TGCATGTACGTACTACTCCCT 57.991 47.619 25.12 0.52 0.00 4.20
2224 3267 3.639538 CATGCATGTACGTACTACTCCC 58.360 50.000 25.12 9.20 0.00 4.30
2225 3268 3.050619 GCATGCATGTACGTACTACTCC 58.949 50.000 26.79 10.43 0.00 3.85
2226 3269 3.702330 TGCATGCATGTACGTACTACTC 58.298 45.455 26.79 12.58 0.00 2.59
2227 3270 3.793797 TGCATGCATGTACGTACTACT 57.206 42.857 26.79 8.50 0.00 2.57
2228 3271 4.088071 CGTATGCATGCATGTACGTACTAC 59.912 45.833 37.43 24.13 35.15 2.73
2229 3272 4.223659 CGTATGCATGCATGTACGTACTA 58.776 43.478 37.43 15.79 35.15 1.82
2230 3273 3.049912 CGTATGCATGCATGTACGTACT 58.950 45.455 37.43 15.82 35.15 2.73
2256 3299 2.813754 ACATGAACACCAACATCCTTCG 59.186 45.455 0.00 0.00 0.00 3.79
2368 3411 1.209128 CATTTGGGCTCTACGCTACG 58.791 55.000 0.00 0.00 39.13 3.51
2463 3508 7.875327 TTAGTTCAAATAGGGAGTAATTGCC 57.125 36.000 0.00 0.00 37.61 4.52
2464 3509 9.569167 GTTTTAGTTCAAATAGGGAGTAATTGC 57.431 33.333 0.00 0.00 0.00 3.56
2467 3512 9.990868 ATGGTTTTAGTTCAAATAGGGAGTAAT 57.009 29.630 0.00 0.00 0.00 1.89
2468 3513 9.238368 CATGGTTTTAGTTCAAATAGGGAGTAA 57.762 33.333 0.00 0.00 0.00 2.24
2469 3514 8.607713 TCATGGTTTTAGTTCAAATAGGGAGTA 58.392 33.333 0.00 0.00 0.00 2.59
2470 3515 7.393515 GTCATGGTTTTAGTTCAAATAGGGAGT 59.606 37.037 0.00 0.00 0.00 3.85
2471 3516 7.414098 CGTCATGGTTTTAGTTCAAATAGGGAG 60.414 40.741 0.00 0.00 0.00 4.30
2472 3517 6.373216 CGTCATGGTTTTAGTTCAAATAGGGA 59.627 38.462 0.00 0.00 0.00 4.20
2473 3518 6.373216 TCGTCATGGTTTTAGTTCAAATAGGG 59.627 38.462 0.00 0.00 0.00 3.53
2474 3519 7.119262 ACTCGTCATGGTTTTAGTTCAAATAGG 59.881 37.037 0.00 0.00 0.00 2.57
2475 3520 8.029642 ACTCGTCATGGTTTTAGTTCAAATAG 57.970 34.615 0.00 0.00 0.00 1.73
2476 3521 7.972832 ACTCGTCATGGTTTTAGTTCAAATA 57.027 32.000 0.00 0.00 0.00 1.40
2477 3522 6.877611 ACTCGTCATGGTTTTAGTTCAAAT 57.122 33.333 0.00 0.00 0.00 2.32
2478 3523 7.789273 TTACTCGTCATGGTTTTAGTTCAAA 57.211 32.000 0.00 0.00 0.00 2.69
2479 3524 7.789273 TTTACTCGTCATGGTTTTAGTTCAA 57.211 32.000 0.00 0.00 0.00 2.69
2480 3525 7.972832 ATTTACTCGTCATGGTTTTAGTTCA 57.027 32.000 0.00 0.00 0.00 3.18
2481 3526 7.749126 CCAATTTACTCGTCATGGTTTTAGTTC 59.251 37.037 0.00 0.00 0.00 3.01
2482 3527 7.446013 TCCAATTTACTCGTCATGGTTTTAGTT 59.554 33.333 0.00 0.00 0.00 2.24
2483 3528 6.938030 TCCAATTTACTCGTCATGGTTTTAGT 59.062 34.615 0.00 0.00 0.00 2.24
2484 3529 7.372451 TCCAATTTACTCGTCATGGTTTTAG 57.628 36.000 0.00 0.00 0.00 1.85
2485 3530 7.571613 CGTTCCAATTTACTCGTCATGGTTTTA 60.572 37.037 0.00 0.00 0.00 1.52
2486 3531 6.443792 GTTCCAATTTACTCGTCATGGTTTT 58.556 36.000 0.00 0.00 0.00 2.43
2487 3532 5.334569 CGTTCCAATTTACTCGTCATGGTTT 60.335 40.000 0.00 0.00 0.00 3.27
2488 3533 4.153475 CGTTCCAATTTACTCGTCATGGTT 59.847 41.667 0.00 0.00 0.00 3.67
2489 3534 3.682858 CGTTCCAATTTACTCGTCATGGT 59.317 43.478 0.00 0.00 0.00 3.55
2490 3535 3.063452 CCGTTCCAATTTACTCGTCATGG 59.937 47.826 0.00 0.00 0.00 3.66
2491 3536 3.930229 TCCGTTCCAATTTACTCGTCATG 59.070 43.478 0.00 0.00 0.00 3.07
2492 3537 4.181578 CTCCGTTCCAATTTACTCGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
2493 3538 3.581755 CTCCGTTCCAATTTACTCGTCA 58.418 45.455 0.00 0.00 0.00 4.35
2494 3539 2.928116 CCTCCGTTCCAATTTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
2495 3540 2.564062 TCCTCCGTTCCAATTTACTCGT 59.436 45.455 0.00 0.00 0.00 4.18
2496 3541 3.241067 TCCTCCGTTCCAATTTACTCG 57.759 47.619 0.00 0.00 0.00 4.18
2497 3542 4.576879 ACTTCCTCCGTTCCAATTTACTC 58.423 43.478 0.00 0.00 0.00 2.59
2498 3543 4.635699 ACTTCCTCCGTTCCAATTTACT 57.364 40.909 0.00 0.00 0.00 2.24
2499 3544 9.768662 TTATATACTTCCTCCGTTCCAATTTAC 57.231 33.333 0.00 0.00 0.00 2.01
2502 3547 9.939802 GTATTATATACTTCCTCCGTTCCAATT 57.060 33.333 0.00 0.00 0.00 2.32
2503 3548 9.096823 TGTATTATATACTTCCTCCGTTCCAAT 57.903 33.333 0.00 0.00 0.00 3.16
2504 3549 8.481492 TGTATTATATACTTCCTCCGTTCCAA 57.519 34.615 0.00 0.00 0.00 3.53
2505 3550 8.481492 TTGTATTATATACTTCCTCCGTTCCA 57.519 34.615 0.00 0.00 0.00 3.53
2506 3551 9.420551 CTTTGTATTATATACTTCCTCCGTTCC 57.579 37.037 0.00 0.00 0.00 3.62
2507 3552 9.978044 ACTTTGTATTATATACTTCCTCCGTTC 57.022 33.333 0.00 0.00 0.00 3.95
2617 3662 2.092267 TCACCAATCATGAGACCCCATG 60.092 50.000 0.09 0.00 43.88 3.66
2618 3663 2.174210 CTCACCAATCATGAGACCCCAT 59.826 50.000 0.09 0.00 45.46 4.00
2619 3664 1.561076 CTCACCAATCATGAGACCCCA 59.439 52.381 0.09 0.00 45.46 4.96
2620 3665 1.561542 ACTCACCAATCATGAGACCCC 59.438 52.381 8.92 0.00 45.46 4.95
2621 3666 3.452627 ACTACTCACCAATCATGAGACCC 59.547 47.826 8.92 0.00 45.46 4.46
2622 3667 4.744795 ACTACTCACCAATCATGAGACC 57.255 45.455 8.92 0.00 45.46 3.85
2623 3668 5.724328 TGAACTACTCACCAATCATGAGAC 58.276 41.667 8.92 0.00 45.46 3.36
2624 3669 6.358974 TTGAACTACTCACCAATCATGAGA 57.641 37.500 8.92 0.00 45.46 3.27
2626 3671 7.716560 CCATATTGAACTACTCACCAATCATGA 59.283 37.037 0.00 0.00 32.21 3.07
2627 3672 7.500227 ACCATATTGAACTACTCACCAATCATG 59.500 37.037 0.00 0.00 32.21 3.07
2628 3673 7.577303 ACCATATTGAACTACTCACCAATCAT 58.423 34.615 0.00 0.00 32.21 2.45
2629 3674 6.957631 ACCATATTGAACTACTCACCAATCA 58.042 36.000 0.00 0.00 32.21 2.57
2630 3675 7.275920 AGACCATATTGAACTACTCACCAATC 58.724 38.462 0.00 0.00 32.21 2.67
2631 3676 7.200434 AGACCATATTGAACTACTCACCAAT 57.800 36.000 0.00 0.00 32.21 3.16
2632 3677 6.620877 AGACCATATTGAACTACTCACCAA 57.379 37.500 0.00 0.00 32.21 3.67
2633 3678 7.727578 TTAGACCATATTGAACTACTCACCA 57.272 36.000 0.00 0.00 32.21 4.17
2634 3679 9.046296 CAATTAGACCATATTGAACTACTCACC 57.954 37.037 0.00 0.00 34.44 4.02
2635 3680 9.601217 ACAATTAGACCATATTGAACTACTCAC 57.399 33.333 0.00 0.00 36.03 3.51
2641 3686 9.920946 ACCAATACAATTAGACCATATTGAACT 57.079 29.630 0.00 0.00 35.97 3.01
2648 3693 9.127277 GGCTAAAACCAATACAATTAGACCATA 57.873 33.333 0.00 0.00 0.00 2.74
2649 3694 7.839200 AGGCTAAAACCAATACAATTAGACCAT 59.161 33.333 0.00 0.00 33.06 3.55
2650 3695 7.122055 CAGGCTAAAACCAATACAATTAGACCA 59.878 37.037 0.00 0.00 33.06 4.02
2651 3696 7.338449 TCAGGCTAAAACCAATACAATTAGACC 59.662 37.037 0.00 0.00 33.06 3.85
2652 3697 8.276252 TCAGGCTAAAACCAATACAATTAGAC 57.724 34.615 0.00 0.00 32.85 2.59
2653 3698 9.474313 AATCAGGCTAAAACCAATACAATTAGA 57.526 29.630 0.00 0.00 0.00 2.10
2656 3701 9.791801 AAAAATCAGGCTAAAACCAATACAATT 57.208 25.926 0.00 0.00 0.00 2.32
2657 3702 9.218440 CAAAAATCAGGCTAAAACCAATACAAT 57.782 29.630 0.00 0.00 0.00 2.71
2658 3703 7.659390 CCAAAAATCAGGCTAAAACCAATACAA 59.341 33.333 0.00 0.00 0.00 2.41
2659 3704 7.158021 CCAAAAATCAGGCTAAAACCAATACA 58.842 34.615 0.00 0.00 0.00 2.29
2660 3705 7.158697 ACCAAAAATCAGGCTAAAACCAATAC 58.841 34.615 0.00 0.00 0.00 1.89
2661 3706 7.309770 ACCAAAAATCAGGCTAAAACCAATA 57.690 32.000 0.00 0.00 0.00 1.90
2662 3707 6.186420 ACCAAAAATCAGGCTAAAACCAAT 57.814 33.333 0.00 0.00 0.00 3.16
2663 3708 5.622346 ACCAAAAATCAGGCTAAAACCAA 57.378 34.783 0.00 0.00 0.00 3.67
2664 3709 6.732896 TTACCAAAAATCAGGCTAAAACCA 57.267 33.333 0.00 0.00 0.00 3.67
2665 3710 8.615878 AATTTACCAAAAATCAGGCTAAAACC 57.384 30.769 0.00 0.00 0.00 3.27
2669 3714 9.921637 CAGTTAATTTACCAAAAATCAGGCTAA 57.078 29.630 0.00 0.00 0.00 3.09
2670 3715 8.527810 CCAGTTAATTTACCAAAAATCAGGCTA 58.472 33.333 0.00 0.00 0.00 3.93
2671 3716 7.386059 CCAGTTAATTTACCAAAAATCAGGCT 58.614 34.615 0.00 0.00 0.00 4.58
2672 3717 6.593770 CCCAGTTAATTTACCAAAAATCAGGC 59.406 38.462 0.00 0.00 0.00 4.85
2673 3718 6.593770 GCCCAGTTAATTTACCAAAAATCAGG 59.406 38.462 0.00 0.00 0.00 3.86
2674 3719 7.158021 TGCCCAGTTAATTTACCAAAAATCAG 58.842 34.615 0.00 0.00 0.00 2.90
2675 3720 7.067496 TGCCCAGTTAATTTACCAAAAATCA 57.933 32.000 0.00 0.00 0.00 2.57
2676 3721 7.971183 TTGCCCAGTTAATTTACCAAAAATC 57.029 32.000 0.00 0.00 0.00 2.17
2677 3722 8.932434 AATTGCCCAGTTAATTTACCAAAAAT 57.068 26.923 0.00 0.00 0.00 1.82
2678 3723 8.214364 AGAATTGCCCAGTTAATTTACCAAAAA 58.786 29.630 0.00 0.00 0.00 1.94
2679 3724 7.740805 AGAATTGCCCAGTTAATTTACCAAAA 58.259 30.769 0.00 0.00 0.00 2.44
2680 3725 7.309770 AGAATTGCCCAGTTAATTTACCAAA 57.690 32.000 0.00 0.00 0.00 3.28
2681 3726 6.926630 AGAATTGCCCAGTTAATTTACCAA 57.073 33.333 0.00 0.00 0.00 3.67
2682 3727 6.926630 AAGAATTGCCCAGTTAATTTACCA 57.073 33.333 0.00 0.00 0.00 3.25
2683 3728 7.611770 AGAAAGAATTGCCCAGTTAATTTACC 58.388 34.615 0.00 0.00 0.00 2.85
2684 3729 9.489084 AAAGAAAGAATTGCCCAGTTAATTTAC 57.511 29.630 0.00 0.00 0.00 2.01
2686 3731 8.978874 AAAAGAAAGAATTGCCCAGTTAATTT 57.021 26.923 0.00 0.00 0.00 1.82
2687 3732 8.432013 AGAAAAGAAAGAATTGCCCAGTTAATT 58.568 29.630 0.00 0.00 0.00 1.40
2688 3733 7.966812 AGAAAAGAAAGAATTGCCCAGTTAAT 58.033 30.769 0.00 0.00 0.00 1.40
2689 3734 7.360113 AGAAAAGAAAGAATTGCCCAGTTAA 57.640 32.000 0.00 0.00 0.00 2.01
2690 3735 6.976934 AGAAAAGAAAGAATTGCCCAGTTA 57.023 33.333 0.00 0.00 0.00 2.24
2691 3736 5.876651 AGAAAAGAAAGAATTGCCCAGTT 57.123 34.783 0.00 0.00 0.00 3.16
2692 3737 5.600069 AGAAGAAAAGAAAGAATTGCCCAGT 59.400 36.000 0.00 0.00 0.00 4.00
2693 3738 6.094193 AGAAGAAAAGAAAGAATTGCCCAG 57.906 37.500 0.00 0.00 0.00 4.45
2694 3739 6.098124 TCAAGAAGAAAAGAAAGAATTGCCCA 59.902 34.615 0.00 0.00 0.00 5.36
2695 3740 6.515832 TCAAGAAGAAAAGAAAGAATTGCCC 58.484 36.000 0.00 0.00 0.00 5.36
2696 3741 8.599055 AATCAAGAAGAAAAGAAAGAATTGCC 57.401 30.769 0.00 0.00 0.00 4.52
2707 3752 9.219497 GCTTCATCGATTAATCAAGAAGAAAAG 57.781 33.333 28.06 18.57 33.84 2.27
2708 3753 8.729756 TGCTTCATCGATTAATCAAGAAGAAAA 58.270 29.630 28.06 17.53 33.84 2.29
2709 3754 8.267620 TGCTTCATCGATTAATCAAGAAGAAA 57.732 30.769 28.06 19.04 33.84 2.52
2710 3755 7.848223 TGCTTCATCGATTAATCAAGAAGAA 57.152 32.000 28.06 21.55 33.84 2.52
2711 3756 7.550551 AGTTGCTTCATCGATTAATCAAGAAGA 59.449 33.333 28.06 15.22 33.84 2.87
2712 3757 7.692088 AGTTGCTTCATCGATTAATCAAGAAG 58.308 34.615 23.68 23.68 34.49 2.85
2713 3758 7.550551 AGAGTTGCTTCATCGATTAATCAAGAA 59.449 33.333 15.57 13.14 0.00 2.52
2714 3759 7.044181 AGAGTTGCTTCATCGATTAATCAAGA 58.956 34.615 15.57 5.95 0.00 3.02
2715 3760 7.244166 AGAGTTGCTTCATCGATTAATCAAG 57.756 36.000 15.57 11.50 0.00 3.02
2716 3761 7.615582 AAGAGTTGCTTCATCGATTAATCAA 57.384 32.000 15.57 4.86 28.17 2.57
2717 3762 7.615582 AAAGAGTTGCTTCATCGATTAATCA 57.384 32.000 15.57 0.00 35.24 2.57
2718 3763 7.044445 GCAAAAGAGTTGCTTCATCGATTAATC 60.044 37.037 5.30 5.30 41.87 1.75
2719 3764 6.749118 GCAAAAGAGTTGCTTCATCGATTAAT 59.251 34.615 0.00 0.00 41.87 1.40
2720 3765 6.086222 GCAAAAGAGTTGCTTCATCGATTAA 58.914 36.000 0.00 0.00 41.87 1.40
2721 3766 5.391950 GGCAAAAGAGTTGCTTCATCGATTA 60.392 40.000 10.58 0.00 44.36 1.75
2722 3767 4.479619 GCAAAAGAGTTGCTTCATCGATT 58.520 39.130 0.00 0.00 41.87 3.34
2723 3768 3.119708 GGCAAAAGAGTTGCTTCATCGAT 60.120 43.478 10.58 0.00 44.36 3.59
2724 3769 2.226437 GGCAAAAGAGTTGCTTCATCGA 59.774 45.455 10.58 0.00 44.36 3.59
2725 3770 2.227388 AGGCAAAAGAGTTGCTTCATCG 59.773 45.455 10.58 0.00 44.36 3.84
2726 3771 3.831112 GAGGCAAAAGAGTTGCTTCATC 58.169 45.455 15.69 4.93 46.58 2.92
2727 3772 3.930634 GAGGCAAAAGAGTTGCTTCAT 57.069 42.857 15.69 0.00 46.58 2.57
2729 3774 1.956477 TGGAGGCAAAAGAGTTGCTTC 59.044 47.619 13.08 13.08 46.61 3.86
2730 3775 2.071778 TGGAGGCAAAAGAGTTGCTT 57.928 45.000 10.58 3.23 44.36 3.91
2731 3776 2.299326 ATGGAGGCAAAAGAGTTGCT 57.701 45.000 10.58 0.00 44.36 3.91
2732 3777 3.320626 GAAATGGAGGCAAAAGAGTTGC 58.679 45.455 2.43 2.43 44.22 4.17
2733 3778 3.568538 CGAAATGGAGGCAAAAGAGTTG 58.431 45.455 0.00 0.00 0.00 3.16
2734 3779 2.558359 CCGAAATGGAGGCAAAAGAGTT 59.442 45.455 0.00 0.00 42.00 3.01
2735 3780 2.162681 CCGAAATGGAGGCAAAAGAGT 58.837 47.619 0.00 0.00 42.00 3.24
2736 3781 1.474077 CCCGAAATGGAGGCAAAAGAG 59.526 52.381 0.00 0.00 42.00 2.85
2737 3782 1.074727 TCCCGAAATGGAGGCAAAAGA 59.925 47.619 0.00 0.00 42.00 2.52
2738 3783 1.544724 TCCCGAAATGGAGGCAAAAG 58.455 50.000 0.00 0.00 42.00 2.27
2739 3784 2.002505 TTCCCGAAATGGAGGCAAAA 57.997 45.000 0.00 0.00 42.00 2.44
2740 3785 2.002505 TTTCCCGAAATGGAGGCAAA 57.997 45.000 0.00 0.00 42.00 3.68
2741 3786 2.002505 TTTTCCCGAAATGGAGGCAA 57.997 45.000 0.00 0.00 42.00 4.52
2742 3787 2.002505 TTTTTCCCGAAATGGAGGCA 57.997 45.000 0.00 0.00 42.00 4.75
2759 3804 7.189512 CGGCTACGTACTACAGTAGTATTTTT 58.810 38.462 21.07 9.99 42.68 1.94
2760 3805 6.238484 CCGGCTACGTACTACAGTAGTATTTT 60.238 42.308 21.07 12.01 42.68 1.82
2761 3806 5.237344 CCGGCTACGTACTACAGTAGTATTT 59.763 44.000 21.07 14.07 42.68 1.40
2762 3807 4.752101 CCGGCTACGTACTACAGTAGTATT 59.248 45.833 21.07 14.36 42.68 1.89
2763 3808 4.202264 ACCGGCTACGTACTACAGTAGTAT 60.202 45.833 21.07 10.57 42.68 2.12
2764 3809 3.132289 ACCGGCTACGTACTACAGTAGTA 59.868 47.826 15.43 15.43 41.59 1.82
2765 3810 2.093447 ACCGGCTACGTACTACAGTAGT 60.093 50.000 17.51 17.51 41.59 2.73
2766 3811 2.555199 ACCGGCTACGTACTACAGTAG 58.445 52.381 0.00 6.00 42.23 2.57
2767 3812 2.691409 ACCGGCTACGTACTACAGTA 57.309 50.000 0.00 0.00 38.78 2.74
2768 3813 2.691409 TACCGGCTACGTACTACAGT 57.309 50.000 0.00 0.00 38.78 3.55
2769 3814 4.355543 TTTTACCGGCTACGTACTACAG 57.644 45.455 0.00 0.00 38.78 2.74
2770 3815 4.775058 TTTTTACCGGCTACGTACTACA 57.225 40.909 0.00 0.00 38.78 2.74
2771 3816 4.437820 CGATTTTTACCGGCTACGTACTAC 59.562 45.833 0.00 0.00 38.78 2.73
2772 3817 4.497340 CCGATTTTTACCGGCTACGTACTA 60.497 45.833 0.00 0.00 39.22 1.82
2773 3818 3.438360 CGATTTTTACCGGCTACGTACT 58.562 45.455 0.00 0.00 38.78 2.73
2774 3819 2.535574 CCGATTTTTACCGGCTACGTAC 59.464 50.000 0.00 0.00 39.22 3.67
2775 3820 2.808244 CCGATTTTTACCGGCTACGTA 58.192 47.619 0.00 0.00 39.22 3.57
2776 3821 1.643880 CCGATTTTTACCGGCTACGT 58.356 50.000 0.00 0.00 39.22 3.57
2800 3845 1.103803 GATCTGTACGCCTGTCCTGA 58.896 55.000 0.00 0.00 0.00 3.86
2849 3907 3.061429 CGATCTCGCTTTTCCTTTCACTC 59.939 47.826 0.00 0.00 0.00 3.51
3014 4073 8.368668 AGAGGAGGAATAACAAAATATACTCCG 58.631 37.037 0.00 0.00 40.71 4.63
3051 4110 3.792047 CCTGCACGGCACATCACG 61.792 66.667 0.00 0.00 33.79 4.35
3055 4114 4.334118 TGCTCCTGCACGGCACAT 62.334 61.111 0.16 0.00 45.31 3.21
3080 4139 4.099170 GCTGCCGCTGCTGTTCTG 62.099 66.667 14.47 0.00 38.57 3.02
3081 4140 4.631247 TGCTGCCGCTGCTGTTCT 62.631 61.111 21.13 0.00 38.57 3.01
3082 4141 4.099170 CTGCTGCCGCTGCTGTTC 62.099 66.667 21.13 0.00 38.57 3.18
3219 4283 5.194432 TGAGAGATTACTGGACTGGAGTAC 58.806 45.833 0.00 0.00 0.00 2.73
3220 4284 5.452341 TGAGAGATTACTGGACTGGAGTA 57.548 43.478 0.00 0.00 0.00 2.59
3221 4285 4.323569 TGAGAGATTACTGGACTGGAGT 57.676 45.455 0.00 0.00 0.00 3.85
3222 4286 4.709397 ACTTGAGAGATTACTGGACTGGAG 59.291 45.833 0.00 0.00 0.00 3.86
3223 4287 4.464244 CACTTGAGAGATTACTGGACTGGA 59.536 45.833 0.00 0.00 0.00 3.86
3224 4288 4.221703 ACACTTGAGAGATTACTGGACTGG 59.778 45.833 0.00 0.00 0.00 4.00
3225 4289 5.047731 TGACACTTGAGAGATTACTGGACTG 60.048 44.000 0.00 0.00 0.00 3.51
3226 4290 5.080337 TGACACTTGAGAGATTACTGGACT 58.920 41.667 0.00 0.00 0.00 3.85
3227 4291 5.392767 TGACACTTGAGAGATTACTGGAC 57.607 43.478 0.00 0.00 0.00 4.02
3261 4325 2.264794 GTTCGTGCGTCCATCCCT 59.735 61.111 0.00 0.00 0.00 4.20
3459 4564 2.363147 GAGTCCCTGGAGCGAGGT 60.363 66.667 0.00 0.00 0.00 3.85
3510 4615 2.655364 CTGCCGTAGCCATCGTCG 60.655 66.667 0.00 0.00 38.69 5.12
3949 5054 1.794714 ATAGGGGTGTAGTGCTCCAG 58.205 55.000 1.67 0.00 32.58 3.86
4037 5144 0.676782 GGTTTCCATGGTCAGACCCG 60.677 60.000 17.59 8.09 37.50 5.28
4202 5309 9.743057 CTAATAGACCTTGAGAGATGTTACTTG 57.257 37.037 0.00 0.00 0.00 3.16
4209 5319 6.968263 TCACCTAATAGACCTTGAGAGATG 57.032 41.667 0.00 0.00 0.00 2.90
4227 5337 1.522569 GGCGGCTACTCATTCACCT 59.477 57.895 0.00 0.00 0.00 4.00
4277 5387 2.462889 CGTTGATGTTTGCTTGCACTT 58.537 42.857 0.00 0.00 0.00 3.16
4360 5470 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
4361 5471 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
4362 5472 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
4363 5473 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
4364 5474 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
4365 5475 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
4366 5476 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
4367 5477 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
4368 5478 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
4369 5479 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
4370 5480 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
4371 5481 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
4372 5482 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
4373 5483 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
4374 5484 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
4375 5485 9.227777 GTTAGTACAAAGTTGGGTCATCTATTT 57.772 33.333 0.00 0.00 0.00 1.40
4376 5486 8.603304 AGTTAGTACAAAGTTGGGTCATCTATT 58.397 33.333 0.00 0.00 0.00 1.73
4377 5487 8.147244 AGTTAGTACAAAGTTGGGTCATCTAT 57.853 34.615 0.00 0.00 0.00 1.98
4378 5488 7.549147 AGTTAGTACAAAGTTGGGTCATCTA 57.451 36.000 0.00 0.00 0.00 1.98
4379 5489 6.435292 AGTTAGTACAAAGTTGGGTCATCT 57.565 37.500 0.00 0.00 0.00 2.90
4380 5490 7.012989 ACAAAGTTAGTACAAAGTTGGGTCATC 59.987 37.037 0.00 0.00 0.00 2.92
4381 5491 6.831868 ACAAAGTTAGTACAAAGTTGGGTCAT 59.168 34.615 0.00 0.00 0.00 3.06
4382 5492 6.181908 ACAAAGTTAGTACAAAGTTGGGTCA 58.818 36.000 0.00 0.00 0.00 4.02
4383 5493 6.688637 ACAAAGTTAGTACAAAGTTGGGTC 57.311 37.500 0.00 0.00 0.00 4.46
4384 5494 7.341030 AGTACAAAGTTAGTACAAAGTTGGGT 58.659 34.615 6.30 0.00 43.24 4.51
4385 5495 7.797038 AGTACAAAGTTAGTACAAAGTTGGG 57.203 36.000 6.30 0.00 43.24 4.12
4421 5531 8.936864 CCGTTCTAAAATAGATGACTCAACTTT 58.063 33.333 0.00 0.00 34.22 2.66
4422 5532 8.311836 TCCGTTCTAAAATAGATGACTCAACTT 58.688 33.333 0.00 0.00 34.22 2.66
4423 5533 7.837863 TCCGTTCTAAAATAGATGACTCAACT 58.162 34.615 0.00 0.00 34.22 3.16
4424 5534 7.222999 CCTCCGTTCTAAAATAGATGACTCAAC 59.777 40.741 0.00 0.00 34.22 3.18
4425 5535 7.265673 CCTCCGTTCTAAAATAGATGACTCAA 58.734 38.462 0.00 0.00 34.22 3.02
4426 5536 6.183360 CCCTCCGTTCTAAAATAGATGACTCA 60.183 42.308 0.00 0.00 34.22 3.41
4427 5537 6.040616 TCCCTCCGTTCTAAAATAGATGACTC 59.959 42.308 0.00 0.00 34.22 3.36
4428 5538 5.897824 TCCCTCCGTTCTAAAATAGATGACT 59.102 40.000 0.00 0.00 34.22 3.41
4429 5539 6.158023 TCCCTCCGTTCTAAAATAGATGAC 57.842 41.667 0.00 0.00 34.22 3.06
4430 5540 5.897824 ACTCCCTCCGTTCTAAAATAGATGA 59.102 40.000 0.00 0.00 34.22 2.92
4431 5541 6.163135 ACTCCCTCCGTTCTAAAATAGATG 57.837 41.667 0.00 0.00 34.22 2.90
4432 5542 7.909485 TTACTCCCTCCGTTCTAAAATAGAT 57.091 36.000 0.00 0.00 34.22 1.98
4433 5543 7.909485 ATTACTCCCTCCGTTCTAAAATAGA 57.091 36.000 0.00 0.00 0.00 1.98
4435 5545 9.991906 CATTATTACTCCCTCCGTTCTAAAATA 57.008 33.333 0.00 0.00 0.00 1.40
4436 5546 8.491958 ACATTATTACTCCCTCCGTTCTAAAAT 58.508 33.333 0.00 0.00 0.00 1.82
4437 5547 7.854337 ACATTATTACTCCCTCCGTTCTAAAA 58.146 34.615 0.00 0.00 0.00 1.52
4438 5548 7.427989 ACATTATTACTCCCTCCGTTCTAAA 57.572 36.000 0.00 0.00 0.00 1.85
4439 5549 8.000709 TCTACATTATTACTCCCTCCGTTCTAA 58.999 37.037 0.00 0.00 0.00 2.10
4440 5550 7.446625 GTCTACATTATTACTCCCTCCGTTCTA 59.553 40.741 0.00 0.00 0.00 2.10
4441 5551 6.264970 GTCTACATTATTACTCCCTCCGTTCT 59.735 42.308 0.00 0.00 0.00 3.01
4442 5552 6.040166 TGTCTACATTATTACTCCCTCCGTTC 59.960 42.308 0.00 0.00 0.00 3.95
4443 5553 5.895534 TGTCTACATTATTACTCCCTCCGTT 59.104 40.000 0.00 0.00 0.00 4.44
4444 5554 5.452255 TGTCTACATTATTACTCCCTCCGT 58.548 41.667 0.00 0.00 0.00 4.69
4445 5555 6.208797 TCATGTCTACATTATTACTCCCTCCG 59.791 42.308 0.00 0.00 33.61 4.63
4446 5556 7.540474 TCATGTCTACATTATTACTCCCTCC 57.460 40.000 0.00 0.00 33.61 4.30
4790 5900 6.060028 TGAGTCTTACTGCAAAATGAACAC 57.940 37.500 0.00 0.00 0.00 3.32
4873 5983 5.665459 TCTGCTAGAGTTGCTCTAAATTCC 58.335 41.667 7.22 0.00 41.74 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.