Multiple sequence alignment - TraesCS5D01G164700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G164700 chr5D 100.000 6765 0 0 1 6765 256462819 256456055 0.000000e+00 12493.0
1 TraesCS5D01G164700 chr5D 95.342 365 17 0 6401 6765 189471020 189470656 1.260000e-161 580.0
2 TraesCS5D01G164700 chr5B 95.549 2224 70 17 2470 4682 290388648 290386443 0.000000e+00 3531.0
3 TraesCS5D01G164700 chr5B 91.196 1647 99 31 776 2393 290390828 290389199 0.000000e+00 2196.0
4 TraesCS5D01G164700 chr5B 96.828 1135 32 2 5023 6157 290385958 290384828 0.000000e+00 1893.0
5 TraesCS5D01G164700 chr5B 87.883 718 73 10 9 721 290391530 290390822 0.000000e+00 832.0
6 TraesCS5D01G164700 chr5B 93.716 366 23 0 6400 6765 45817815 45817450 3.570000e-152 549.0
7 TraesCS5D01G164700 chr5B 95.578 294 11 1 4737 5028 290386290 290385997 2.860000e-128 470.0
8 TraesCS5D01G164700 chr5B 87.324 142 8 6 4480 4612 243421534 243421394 3.270000e-33 154.0
9 TraesCS5D01G164700 chr5B 94.624 93 4 1 4676 4768 290386407 290386316 7.070000e-30 143.0
10 TraesCS5D01G164700 chr5B 87.097 93 12 0 4686 4778 187046357 187046449 9.280000e-19 106.0
11 TraesCS5D01G164700 chr5A 91.400 1872 123 15 186 2046 340819442 340817598 0.000000e+00 2531.0
12 TraesCS5D01G164700 chr5A 87.973 2112 153 49 2233 4315 340817599 340815560 0.000000e+00 2399.0
13 TraesCS5D01G164700 chr5A 92.493 746 46 8 4776 5520 340815353 340814617 0.000000e+00 1059.0
14 TraesCS5D01G164700 chr5A 88.457 823 55 20 5518 6318 340814375 340813571 0.000000e+00 957.0
15 TraesCS5D01G164700 chr5A 95.355 366 17 0 6400 6765 31962705 31962340 3.520000e-162 582.0
16 TraesCS5D01G164700 chr5A 80.095 211 36 6 544 752 4117308 4117102 1.180000e-32 152.0
17 TraesCS5D01G164700 chr5A 85.161 155 14 5 4480 4626 295076428 295076275 4.230000e-32 150.0
18 TraesCS5D01G164700 chr5A 84.746 118 10 2 4368 4484 340815567 340815457 1.990000e-20 111.0
19 TraesCS5D01G164700 chr5A 87.097 93 12 0 4686 4778 185649793 185649701 9.280000e-19 106.0
20 TraesCS5D01G164700 chr6D 95.405 370 16 1 6396 6765 254854299 254854667 7.560000e-164 588.0
21 TraesCS5D01G164700 chr6D 79.717 212 41 2 524 734 38883491 38883701 1.180000e-32 152.0
22 TraesCS5D01G164700 chr6D 95.652 46 2 0 4315 4360 437953756 437953711 2.620000e-09 75.0
23 TraesCS5D01G164700 chr6D 89.796 49 5 0 4312 4360 81922673 81922721 5.660000e-06 63.9
24 TraesCS5D01G164700 chr1D 95.082 366 18 0 6400 6765 298427123 298426758 1.640000e-160 577.0
25 TraesCS5D01G164700 chr1D 81.443 194 31 4 542 734 16235888 16235699 3.270000e-33 154.0
26 TraesCS5D01G164700 chr1D 94.203 69 4 0 4709 4777 246070904 246070836 9.280000e-19 106.0
27 TraesCS5D01G164700 chr7B 95.082 366 17 1 6400 6765 466050887 466050523 5.880000e-160 575.0
28 TraesCS5D01G164700 chr2B 94.780 364 19 0 6402 6765 317091992 317091629 9.850000e-158 568.0
29 TraesCS5D01G164700 chr4A 94.262 366 21 0 6400 6765 629948542 629948177 1.650000e-155 560.0
30 TraesCS5D01G164700 chr4A 93.716 366 23 0 6400 6765 553467200 553467565 3.570000e-152 549.0
31 TraesCS5D01G164700 chr4A 85.714 154 17 4 4480 4632 84537500 84537351 2.530000e-34 158.0
32 TraesCS5D01G164700 chr4A 86.364 66 9 0 4311 4376 743919109 743919044 9.410000e-09 73.1
33 TraesCS5D01G164700 chr3D 85.161 155 15 4 4480 4627 85449520 85449367 1.180000e-32 152.0
34 TraesCS5D01G164700 chr3D 78.855 227 43 5 528 752 563655375 563655598 1.520000e-31 148.0
35 TraesCS5D01G164700 chr3D 88.636 88 10 0 4693 4780 219571942 219572029 2.580000e-19 108.0
36 TraesCS5D01G164700 chr3D 100.000 37 0 0 4338 4374 26287687 26287723 1.220000e-07 69.4
37 TraesCS5D01G164700 chr7D 84.713 157 17 5 4479 4629 614250189 614250344 4.230000e-32 150.0
38 TraesCS5D01G164700 chr7D 81.143 175 31 2 528 701 8455878 8455705 9.150000e-29 139.0
39 TraesCS5D01G164700 chr7D 76.023 171 38 3 436 604 375978313 375978482 1.210000e-12 86.1
40 TraesCS5D01G164700 chr3A 85.065 154 16 6 4480 4627 383691084 383690932 4.230000e-32 150.0
41 TraesCS5D01G164700 chr3A 90.588 85 6 1 4692 4776 536635227 536635309 1.990000e-20 111.0
42 TraesCS5D01G164700 chr3A 84.746 59 9 0 4311 4369 727071265 727071323 7.330000e-05 60.2
43 TraesCS5D01G164700 chr4D 78.947 228 40 7 528 751 495977334 495977111 1.520000e-31 148.0
44 TraesCS5D01G164700 chr4D 83.648 159 16 8 4480 4630 335774284 335774440 2.540000e-29 141.0
45 TraesCS5D01G164700 chr6A 84.768 151 16 4 4480 4624 117350663 117350812 1.970000e-30 145.0
46 TraesCS5D01G164700 chr1A 73.188 414 99 12 345 751 7313833 7313425 9.150000e-29 139.0
47 TraesCS5D01G164700 chr1A 89.796 49 5 0 4312 4360 287687593 287687641 5.660000e-06 63.9
48 TraesCS5D01G164700 chr1B 87.097 93 12 0 4685 4777 332083781 332083873 9.280000e-19 106.0
49 TraesCS5D01G164700 chr1B 93.333 45 3 0 4311 4355 317586200 317586244 4.380000e-07 67.6
50 TraesCS5D01G164700 chr3B 87.500 88 11 0 4693 4780 293745257 293745344 1.200000e-17 102.0
51 TraesCS5D01G164700 chr2A 87.879 66 8 0 4312 4377 504548026 504548091 2.020000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G164700 chr5D 256456055 256462819 6764 True 12493.000000 12493 100.000000 1 6765 1 chr5D.!!$R2 6764
1 TraesCS5D01G164700 chr5B 290384828 290391530 6702 True 1510.833333 3531 93.609667 9 6157 6 chr5B.!!$R3 6148
2 TraesCS5D01G164700 chr5A 340813571 340819442 5871 True 1411.400000 2531 89.013800 186 6318 5 chr5A.!!$R5 6132

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
630 635 0.681733 TAAGAGAGGGGCGATGATGC 59.318 55.000 0.0 0.0 0.00 3.91 F
656 662 1.529438 CACTTTTCGGCTTGCTTCGTA 59.471 47.619 0.0 0.0 0.00 3.43 F
2431 2503 0.267960 TCTACCATCTCCCTTCCCCC 59.732 60.000 0.0 0.0 0.00 5.40 F
3209 3725 0.909610 CTAGGGTTGAGGGTGGCAGA 60.910 60.000 0.0 0.0 0.00 4.26 F
4674 5199 1.091537 TACATTTTGCGGCCTAGTGC 58.908 50.000 0.0 0.0 40.16 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1480 1511 1.001641 GCTCCCAGCTCATTGGTGT 60.002 57.895 0.00 0.00 42.19 4.16 R
2541 3056 1.410004 TAGAAGATCGGCGGGTCAAT 58.590 50.000 7.21 0.00 0.00 2.57 R
4354 4878 3.735591 CAACTACTCCCTCCGTTTCAAA 58.264 45.455 0.00 0.00 0.00 2.69 R
4828 5452 0.798776 AAGAAACCTGCATCGAAGCG 59.201 50.000 8.26 3.03 37.31 4.68 R
6637 7570 0.179073 AGAATGAGGGACAATCGGCG 60.179 55.000 0.00 0.00 34.00 6.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 82 3.243737 ACACAAGCTATGTCTCGTGTTGA 60.244 43.478 0.00 0.00 41.46 3.18
82 83 3.121944 CACAAGCTATGTCTCGTGTTGAC 59.878 47.826 0.00 0.00 41.46 3.18
89 90 4.059459 CTCGTGTTGACACCGCGC 62.059 66.667 0.00 0.00 43.66 6.86
92 93 4.307908 GTGTTGACACCGCGCCAC 62.308 66.667 0.00 0.00 40.85 5.01
93 94 4.840005 TGTTGACACCGCGCCACA 62.840 61.111 0.00 0.00 0.00 4.17
94 95 3.353836 GTTGACACCGCGCCACAT 61.354 61.111 0.00 0.00 0.00 3.21
95 96 2.030401 GTTGACACCGCGCCACATA 61.030 57.895 0.00 0.00 0.00 2.29
103 104 1.153647 CGCGCCACATACTCCTTCA 60.154 57.895 0.00 0.00 0.00 3.02
104 105 1.421410 CGCGCCACATACTCCTTCAC 61.421 60.000 0.00 0.00 0.00 3.18
120 121 3.643320 CCTTCACCCTATGCTATCTCACA 59.357 47.826 0.00 0.00 0.00 3.58
134 135 3.885724 TCTCACAACCATGCGATTAGA 57.114 42.857 0.00 0.00 0.00 2.10
135 136 4.200838 TCTCACAACCATGCGATTAGAA 57.799 40.909 0.00 0.00 0.00 2.10
141 142 6.150976 TCACAACCATGCGATTAGAATTTCTT 59.849 34.615 3.86 0.00 0.00 2.52
152 153 3.268023 AGAATTTCTTGCCTCCTACCG 57.732 47.619 0.00 0.00 0.00 4.02
153 154 2.092914 AGAATTTCTTGCCTCCTACCGG 60.093 50.000 0.00 0.00 0.00 5.28
181 182 1.982660 CAGGTATGCCTCGTCTCCTA 58.017 55.000 0.00 0.00 44.97 2.94
212 213 4.131088 GGAGACGCGGTGGACCTC 62.131 72.222 12.47 6.70 0.00 3.85
255 256 3.691498 GCTTGCTCAGTTTTTACGTGTT 58.309 40.909 0.00 0.00 0.00 3.32
300 304 1.933021 TCTTCTTAGGAAGGCGTGGA 58.067 50.000 14.05 0.00 46.42 4.02
357 361 1.002868 CTCAGCCCTGTCTTGGTGG 60.003 63.158 0.00 0.00 0.00 4.61
365 369 0.946221 CTGTCTTGGTGGTGCGTCTC 60.946 60.000 0.00 0.00 0.00 3.36
412 416 4.526262 GTGTATCTCTGGTAGATCCTGCAT 59.474 45.833 0.00 0.00 44.17 3.96
467 471 0.866483 GAGCCGATCTTCGTTCGTCC 60.866 60.000 0.00 0.00 38.40 4.79
485 489 1.545136 TCCGCGTTGGTATGTCTACAA 59.455 47.619 4.92 0.00 39.52 2.41
489 493 3.060363 CGCGTTGGTATGTCTACAAGTTC 59.940 47.826 0.00 0.00 0.00 3.01
499 503 7.972277 GGTATGTCTACAAGTTCGATACTTCAA 59.028 37.037 9.20 2.45 45.29 2.69
517 521 5.649831 ACTTCAAATCTTAGCTTCACCCATC 59.350 40.000 0.00 0.00 0.00 3.51
535 539 4.122046 CCATCGACAACAGATGCTATTCA 58.878 43.478 0.00 0.00 42.92 2.57
537 541 4.456280 TCGACAACAGATGCTATTCAGT 57.544 40.909 0.00 0.00 0.00 3.41
547 551 0.804989 GCTATTCAGTTGCGCTGGTT 59.195 50.000 9.73 0.00 45.08 3.67
556 560 2.031163 GCGCTGGTTCTGTGAGGT 59.969 61.111 0.00 0.00 0.00 3.85
630 635 0.681733 TAAGAGAGGGGCGATGATGC 59.318 55.000 0.00 0.00 0.00 3.91
656 662 1.529438 CACTTTTCGGCTTGCTTCGTA 59.471 47.619 0.00 0.00 0.00 3.43
668 674 4.715896 CTTGCTTCGTACTTGTAGTCGTA 58.284 43.478 0.00 0.00 0.00 3.43
693 699 3.705051 AGGTGGTCTACGGTTCTGAATA 58.295 45.455 0.00 0.00 0.00 1.75
726 733 5.986135 ACTACTTCTGCTGTTCTTTGTACTG 59.014 40.000 0.00 0.00 0.00 2.74
867 882 1.781429 CTGACAGACACGAACGACTTG 59.219 52.381 0.00 0.00 0.00 3.16
921 936 3.889692 AGCCACCACCACCACCAG 61.890 66.667 0.00 0.00 0.00 4.00
922 937 3.884774 GCCACCACCACCACCAGA 61.885 66.667 0.00 0.00 0.00 3.86
923 938 2.431683 CCACCACCACCACCAGAG 59.568 66.667 0.00 0.00 0.00 3.35
1125 1144 2.105477 CCTCCTCGGAATCCACATTCAT 59.895 50.000 0.00 0.00 40.41 2.57
1129 1148 2.545526 CTCGGAATCCACATTCATTCGG 59.454 50.000 0.00 0.00 40.41 4.30
1201 1220 3.349006 CGCGTGGTGCTTCAGCTT 61.349 61.111 0.00 0.00 43.27 3.74
1377 1399 1.679981 TGGATTCCCCACATCAAGGA 58.320 50.000 0.00 0.00 40.82 3.36
1480 1511 5.616270 TGGTTGAGTTTGCACATTACTCTA 58.384 37.500 14.73 7.74 39.18 2.43
1620 1651 5.494390 TGACCTTAAAGGGTAGGTTCTTC 57.506 43.478 0.00 0.00 44.65 2.87
2046 2078 3.749088 CGTTGCAATAGTACAAGGGACAA 59.251 43.478 0.59 0.00 0.00 3.18
2051 2083 6.535540 TGCAATAGTACAAGGGACAAACTTA 58.464 36.000 0.00 0.00 0.00 2.24
2063 2103 4.084013 GGGACAAACTTATGTTCTGTCGTG 60.084 45.833 18.90 8.04 37.80 4.35
2083 2123 6.413818 GTCGTGTTCATTGTTTCCTTTACTTG 59.586 38.462 0.00 0.00 0.00 3.16
2097 2137 9.629878 TTTCCTTTACTTGTGGTTCTGTAATTA 57.370 29.630 0.00 0.00 0.00 1.40
2150 2190 4.317530 TTCTTCCTAGAGTAGCACCTCA 57.682 45.455 5.57 0.00 33.75 3.86
2167 2207 3.319122 ACCTCAGGCAAGAAAATGTTCAC 59.681 43.478 0.00 0.00 36.09 3.18
2190 2230 3.348647 TGCAGCCTAAAGATAGCACAA 57.651 42.857 0.00 0.00 0.00 3.33
2205 2245 7.730084 AGATAGCACAAGCACTTTAGATGATA 58.270 34.615 0.00 0.00 45.49 2.15
2215 2255 7.852263 AGCACTTTAGATGATACTACCTGTTT 58.148 34.615 0.00 0.00 0.00 2.83
2225 2265 9.413048 GATGATACTACCTGTTTACTCAATAGC 57.587 37.037 0.00 0.00 0.00 2.97
2256 2296 6.183360 GCATTCAAAATATGAGGCAGAAGTCT 60.183 38.462 0.00 0.00 39.77 3.24
2326 2367 1.879380 TCACTCGTTTGCCCTCATTTG 59.121 47.619 0.00 0.00 0.00 2.32
2330 2371 2.151202 TCGTTTGCCCTCATTTGTCTC 58.849 47.619 0.00 0.00 0.00 3.36
2357 2398 4.385199 CCCTCCCTTTATCACTTATGTGCA 60.385 45.833 3.90 0.00 43.49 4.57
2410 2482 9.434420 CTCTCTCTTATTATCATGGTCATTTCC 57.566 37.037 0.00 0.00 0.00 3.13
2420 2492 4.103153 TCATGGTCATTTCCCTCTACCATC 59.897 45.833 2.39 0.00 45.57 3.51
2421 2493 3.736094 TGGTCATTTCCCTCTACCATCT 58.264 45.455 0.00 0.00 35.34 2.90
2422 2494 3.711704 TGGTCATTTCCCTCTACCATCTC 59.288 47.826 0.00 0.00 35.34 2.75
2424 2496 3.071747 GTCATTTCCCTCTACCATCTCCC 59.928 52.174 0.00 0.00 0.00 4.30
2426 2498 3.508952 TTTCCCTCTACCATCTCCCTT 57.491 47.619 0.00 0.00 0.00 3.95
2427 2499 2.777459 TCCCTCTACCATCTCCCTTC 57.223 55.000 0.00 0.00 0.00 3.46
2430 2502 1.723288 CTCTACCATCTCCCTTCCCC 58.277 60.000 0.00 0.00 0.00 4.81
2431 2503 0.267960 TCTACCATCTCCCTTCCCCC 59.732 60.000 0.00 0.00 0.00 5.40
2460 2532 8.811017 TCTCTCTTATTATCTAAGGCTGGAATG 58.189 37.037 0.00 0.00 0.00 2.67
2461 2533 7.390027 TCTCTTATTATCTAAGGCTGGAATGC 58.610 38.462 0.00 0.00 0.00 3.56
2582 3097 7.723324 TCTAATAGGAAACCTAATTGGAGACG 58.277 38.462 1.56 0.00 39.77 4.18
2665 3180 8.680903 TCTGATTTTCTTTCATATGAGCCTTTC 58.319 33.333 5.39 0.42 0.00 2.62
2669 3184 4.202441 TCTTTCATATGAGCCTTTCCTGC 58.798 43.478 5.39 0.00 0.00 4.85
2702 3218 4.266714 ACATATCCCAAGGGTTTGTAACG 58.733 43.478 4.80 0.00 36.47 3.18
2711 3227 5.239963 CCAAGGGTTTGTAACGTGTTATCTT 59.760 40.000 0.00 0.00 32.21 2.40
2896 3412 7.829211 AGTCCAGCTCTAAATACTTTGCATTAA 59.171 33.333 0.00 0.00 0.00 1.40
3062 3578 4.949856 ACATGATCGGTAAAGGCTTGAAAT 59.050 37.500 0.00 0.00 0.00 2.17
3097 3613 4.522789 AGATTTTACAATCCACACCACCAC 59.477 41.667 0.00 0.00 39.95 4.16
3209 3725 0.909610 CTAGGGTTGAGGGTGGCAGA 60.910 60.000 0.00 0.00 0.00 4.26
3210 3726 1.198759 TAGGGTTGAGGGTGGCAGAC 61.199 60.000 0.00 0.00 0.00 3.51
3211 3727 2.529744 GGGTTGAGGGTGGCAGACT 61.530 63.158 0.00 0.00 0.00 3.24
3212 3728 1.302832 GGTTGAGGGTGGCAGACTG 60.303 63.158 0.00 0.00 0.00 3.51
3213 3729 1.302832 GTTGAGGGTGGCAGACTGG 60.303 63.158 4.26 0.00 0.00 4.00
3214 3730 3.196207 TTGAGGGTGGCAGACTGGC 62.196 63.158 21.54 21.54 44.03 4.85
3399 3918 2.026822 CCACTGCTTGAGGGTTACATCT 60.027 50.000 0.00 0.00 0.00 2.90
3400 3919 3.005554 CACTGCTTGAGGGTTACATCTG 58.994 50.000 0.00 0.00 0.00 2.90
3422 3941 5.472148 TGCACCTTCATTTCATCATTCAAC 58.528 37.500 0.00 0.00 0.00 3.18
3817 4337 3.518303 AGCGTGAGTCCTTTATACCCTTT 59.482 43.478 0.00 0.00 0.00 3.11
4235 4756 4.054780 TGGTACTTCTCAGTTGTGTCAC 57.945 45.455 0.00 0.00 34.06 3.67
4249 4770 5.581085 AGTTGTGTCACTCAGTTTTACTGTC 59.419 40.000 4.27 0.00 46.03 3.51
4321 4845 2.820178 TGTCATGAGCTAGTCCTTCCA 58.180 47.619 0.00 0.00 0.00 3.53
4337 4861 6.371825 AGTCCTTCCATTCGAAAATAAGTGAC 59.628 38.462 0.00 13.48 0.00 3.67
4349 4873 7.011295 TCGAAAATAAGTGACGTGGTTTTAGTT 59.989 33.333 0.00 0.00 0.00 2.24
4354 4878 6.445357 AAGTGACGTGGTTTTAGTTCAAAT 57.555 33.333 0.00 0.00 0.00 2.32
4374 4898 4.635699 ATTTGAAACGGAGGGAGTAGTT 57.364 40.909 0.00 0.00 0.00 2.24
4393 4917 7.200455 AGTAGTTGCATAAAGTTTGGTTTCAC 58.800 34.615 0.00 0.00 0.00 3.18
4394 4918 5.971763 AGTTGCATAAAGTTTGGTTTCACA 58.028 33.333 0.00 0.00 0.00 3.58
4440 4964 8.742554 ATAACTTCTTATTTTTGAAACGCCTG 57.257 30.769 0.00 0.00 0.00 4.85
4478 5002 3.107601 TCTAGAGGTGGTAGCAGCATTT 58.892 45.455 24.51 12.32 0.00 2.32
4559 5084 7.627340 ACGTTTTAGTATGTTTGTTCACTCAG 58.373 34.615 0.00 0.00 0.00 3.35
4567 5092 4.832248 TGTTTGTTCACTCAGTTCAGTCT 58.168 39.130 0.00 0.00 0.00 3.24
4620 5145 8.400947 CAACATCTTATATTTGTGAACAGAGGG 58.599 37.037 0.00 0.00 0.00 4.30
4674 5199 1.091537 TACATTTTGCGGCCTAGTGC 58.908 50.000 0.00 0.00 40.16 4.40
4691 5257 7.201652 GGCCTAGTGCTTAAATCTGTTAGAAAG 60.202 40.741 0.00 0.00 40.92 2.62
4700 5266 9.945904 CTTAAATCTGTTAGAAAGTACTCCCTT 57.054 33.333 0.00 0.00 0.00 3.95
4701 5267 9.720769 TTAAATCTGTTAGAAAGTACTCCCTTG 57.279 33.333 0.00 0.00 0.00 3.61
4828 5452 9.982651 TGGAGAATATAAACTAACATCTGCTAC 57.017 33.333 0.00 0.00 0.00 3.58
4898 5522 1.206578 CCATGTGGTCGAACAACGC 59.793 57.895 3.77 0.00 42.26 4.84
4929 5553 8.915036 AGTGGTAATTGTCCTATCTTGTACTAG 58.085 37.037 0.00 0.00 0.00 2.57
4938 5562 7.142680 GTCCTATCTTGTACTAGAAGTGCATC 58.857 42.308 11.06 0.00 40.42 3.91
5087 5754 7.092716 AGCATGTTTCTGTAATTTCCATTGAC 58.907 34.615 0.00 0.00 0.00 3.18
5089 5756 7.274250 GCATGTTTCTGTAATTTCCATTGACTC 59.726 37.037 0.00 0.00 0.00 3.36
5179 5846 7.514721 TCCAGTACTTTGTTCTTGAGGTTATT 58.485 34.615 0.00 0.00 0.00 1.40
5324 5992 5.763876 ACCTGAAATTGGTTCTACTAGCT 57.236 39.130 0.00 0.00 37.13 3.32
5743 6658 5.878669 AGGGTTTAATCCAACACGATACTTC 59.121 40.000 0.00 0.00 35.00 3.01
5927 6857 2.106938 CCATCAGCGAGCGCCTTA 59.893 61.111 11.66 0.00 43.17 2.69
5979 6909 9.559958 CTTGTTCATATATGTGTTGTTTCCTTC 57.440 33.333 12.42 0.00 0.00 3.46
5996 6926 3.202151 TCCTTCGATTTAAGCCCAAGGAT 59.798 43.478 4.70 0.00 35.53 3.24
5997 6927 3.954258 CCTTCGATTTAAGCCCAAGGATT 59.046 43.478 0.70 0.00 33.50 3.01
6046 6976 9.973246 GTACAGTATCATATTAAATTGGCATCG 57.027 33.333 0.00 0.00 0.00 3.84
6064 6994 4.524749 CATCGACATTGCATGTGATCTTC 58.475 43.478 6.61 0.00 45.03 2.87
6074 7004 3.564644 GCATGTGATCTTCCTTCCATCAG 59.435 47.826 0.00 0.00 0.00 2.90
6091 7021 2.783135 TCAGCTTCTTTTACCTGCCAG 58.217 47.619 0.00 0.00 0.00 4.85
6103 7033 1.172175 CCTGCCAGCTTTCCTCTTTC 58.828 55.000 0.00 0.00 0.00 2.62
6131 7063 9.106070 CACCACTAACAATTTTAGAGGTATACC 57.894 37.037 14.54 14.54 41.75 2.73
6158 7090 4.518970 GTCTGGATTGTTCCTTTGCACTTA 59.481 41.667 0.00 0.00 43.07 2.24
6159 7091 4.518970 TCTGGATTGTTCCTTTGCACTTAC 59.481 41.667 0.00 0.00 43.07 2.34
6161 7093 3.500680 GGATTGTTCCTTTGCACTTACGA 59.499 43.478 0.00 0.00 39.14 3.43
6163 7095 4.481930 TTGTTCCTTTGCACTTACGATG 57.518 40.909 0.00 0.00 0.00 3.84
6165 7097 2.812011 GTTCCTTTGCACTTACGATGGT 59.188 45.455 0.00 0.00 0.00 3.55
6166 7098 3.965379 TCCTTTGCACTTACGATGGTA 57.035 42.857 0.00 0.00 0.00 3.25
6174 7106 4.142026 TGCACTTACGATGGTATACTTGCT 60.142 41.667 2.25 0.00 0.00 3.91
6178 7110 6.144080 CACTTACGATGGTATACTTGCTTAGC 59.856 42.308 2.25 0.00 0.00 3.09
6185 7117 4.469945 TGGTATACTTGCTTAGCCTTCAGT 59.530 41.667 0.29 1.39 0.00 3.41
6195 7127 5.186198 GCTTAGCCTTCAGTATTTTCCTGA 58.814 41.667 0.00 0.00 37.18 3.86
6199 7131 5.983540 AGCCTTCAGTATTTTCCTGACTAG 58.016 41.667 0.00 0.00 38.62 2.57
6234 7167 1.007038 GACGGTCACGCCACTTGTA 60.007 57.895 2.62 0.00 46.04 2.41
6240 7173 1.877443 GTCACGCCACTTGTACCAATT 59.123 47.619 0.00 0.00 0.00 2.32
6249 7182 4.279671 CCACTTGTACCAATTGTTGCCTTA 59.720 41.667 4.43 0.00 0.00 2.69
6261 7194 1.468914 GTTGCCTTAGTACAGCCAAGC 59.531 52.381 0.00 0.00 0.00 4.01
6291 7224 1.012486 CGGTTACACCAGCGGACTTC 61.012 60.000 1.50 0.00 38.47 3.01
6292 7225 0.320697 GGTTACACCAGCGGACTTCT 59.679 55.000 1.50 0.00 38.42 2.85
6295 7228 2.876550 GTTACACCAGCGGACTTCTTTT 59.123 45.455 1.50 0.00 0.00 2.27
6301 7234 0.249911 AGCGGACTTCTTTTGCGTCT 60.250 50.000 0.00 0.00 0.00 4.18
6303 7236 0.512952 CGGACTTCTTTTGCGTCTGG 59.487 55.000 0.00 0.00 31.93 3.86
6307 7240 2.616842 GACTTCTTTTGCGTCTGGGAAA 59.383 45.455 0.00 0.00 33.81 3.13
6335 7268 5.259832 GGTACCAGTATGAGAGTAACCAC 57.740 47.826 7.15 0.00 39.69 4.16
6336 7269 4.954826 GGTACCAGTATGAGAGTAACCACT 59.045 45.833 7.15 0.00 39.69 4.00
6346 7279 3.596310 GAGTAACCACTCCCTCTGTTC 57.404 52.381 0.00 0.00 44.72 3.18
6347 7280 2.234168 GAGTAACCACTCCCTCTGTTCC 59.766 54.545 0.00 0.00 44.72 3.62
6348 7281 2.158143 AGTAACCACTCCCTCTGTTCCT 60.158 50.000 0.00 0.00 0.00 3.36
6349 7282 2.715763 AACCACTCCCTCTGTTCCTA 57.284 50.000 0.00 0.00 0.00 2.94
6350 7283 1.939980 ACCACTCCCTCTGTTCCTAC 58.060 55.000 0.00 0.00 0.00 3.18
6351 7284 0.818296 CCACTCCCTCTGTTCCTACG 59.182 60.000 0.00 0.00 0.00 3.51
6352 7285 1.546961 CACTCCCTCTGTTCCTACGT 58.453 55.000 0.00 0.00 0.00 3.57
6353 7286 1.202582 CACTCCCTCTGTTCCTACGTG 59.797 57.143 0.00 0.00 0.00 4.49
6354 7287 1.203025 ACTCCCTCTGTTCCTACGTGT 60.203 52.381 0.00 0.00 0.00 4.49
6355 7288 1.893801 CTCCCTCTGTTCCTACGTGTT 59.106 52.381 0.00 0.00 0.00 3.32
6356 7289 2.299297 CTCCCTCTGTTCCTACGTGTTT 59.701 50.000 0.00 0.00 0.00 2.83
6357 7290 2.701951 TCCCTCTGTTCCTACGTGTTTT 59.298 45.455 0.00 0.00 0.00 2.43
6358 7291 3.896888 TCCCTCTGTTCCTACGTGTTTTA 59.103 43.478 0.00 0.00 0.00 1.52
6359 7292 4.021719 TCCCTCTGTTCCTACGTGTTTTAG 60.022 45.833 0.00 0.00 0.00 1.85
6360 7293 4.262335 CCCTCTGTTCCTACGTGTTTTAGT 60.262 45.833 0.00 0.00 0.00 2.24
6361 7294 4.684703 CCTCTGTTCCTACGTGTTTTAGTG 59.315 45.833 0.00 0.00 0.00 2.74
6362 7295 5.266733 TCTGTTCCTACGTGTTTTAGTGT 57.733 39.130 0.00 0.00 0.00 3.55
6363 7296 5.045215 TCTGTTCCTACGTGTTTTAGTGTG 58.955 41.667 0.00 0.00 0.00 3.82
6364 7297 4.757594 TGTTCCTACGTGTTTTAGTGTGT 58.242 39.130 0.00 0.00 0.00 3.72
6365 7298 5.900425 TGTTCCTACGTGTTTTAGTGTGTA 58.100 37.500 0.00 0.00 0.00 2.90
6366 7299 6.514947 TGTTCCTACGTGTTTTAGTGTGTAT 58.485 36.000 0.00 0.00 0.00 2.29
6367 7300 6.421501 TGTTCCTACGTGTTTTAGTGTGTATG 59.578 38.462 0.00 0.00 0.00 2.39
6368 7301 6.088016 TCCTACGTGTTTTAGTGTGTATGT 57.912 37.500 0.00 0.00 0.00 2.29
6369 7302 6.514947 TCCTACGTGTTTTAGTGTGTATGTT 58.485 36.000 0.00 0.00 0.00 2.71
6370 7303 6.642131 TCCTACGTGTTTTAGTGTGTATGTTC 59.358 38.462 0.00 0.00 0.00 3.18
6371 7304 6.421501 CCTACGTGTTTTAGTGTGTATGTTCA 59.578 38.462 0.00 0.00 0.00 3.18
6372 7305 6.854496 ACGTGTTTTAGTGTGTATGTTCAT 57.146 33.333 0.00 0.00 0.00 2.57
6373 7306 6.884187 ACGTGTTTTAGTGTGTATGTTCATC 58.116 36.000 0.00 0.00 0.00 2.92
6374 7307 6.480651 ACGTGTTTTAGTGTGTATGTTCATCA 59.519 34.615 0.00 0.00 0.00 3.07
6375 7308 7.011576 ACGTGTTTTAGTGTGTATGTTCATCAA 59.988 33.333 0.00 0.00 0.00 2.57
6376 7309 8.015087 CGTGTTTTAGTGTGTATGTTCATCAAT 58.985 33.333 0.00 0.00 0.00 2.57
6377 7310 9.677567 GTGTTTTAGTGTGTATGTTCATCAATT 57.322 29.630 0.00 0.00 0.00 2.32
6381 7314 9.689976 TTTAGTGTGTATGTTCATCAATTTTGG 57.310 29.630 0.00 0.00 0.00 3.28
6382 7315 7.288810 AGTGTGTATGTTCATCAATTTTGGT 57.711 32.000 0.00 0.00 0.00 3.67
6383 7316 7.370383 AGTGTGTATGTTCATCAATTTTGGTC 58.630 34.615 0.00 0.00 0.00 4.02
6384 7317 6.586082 GTGTGTATGTTCATCAATTTTGGTCC 59.414 38.462 0.00 0.00 0.00 4.46
6385 7318 5.799936 GTGTATGTTCATCAATTTTGGTCCG 59.200 40.000 0.00 0.00 0.00 4.79
6386 7319 5.475220 TGTATGTTCATCAATTTTGGTCCGT 59.525 36.000 0.00 0.00 0.00 4.69
6387 7320 6.655425 TGTATGTTCATCAATTTTGGTCCGTA 59.345 34.615 0.00 0.00 0.00 4.02
6388 7321 6.773976 ATGTTCATCAATTTTGGTCCGTAT 57.226 33.333 0.00 0.00 0.00 3.06
6389 7322 6.582677 TGTTCATCAATTTTGGTCCGTATT 57.417 33.333 0.00 0.00 0.00 1.89
6390 7323 6.987386 TGTTCATCAATTTTGGTCCGTATTT 58.013 32.000 0.00 0.00 0.00 1.40
6391 7324 8.112016 TGTTCATCAATTTTGGTCCGTATTTA 57.888 30.769 0.00 0.00 0.00 1.40
6392 7325 8.240682 TGTTCATCAATTTTGGTCCGTATTTAG 58.759 33.333 0.00 0.00 0.00 1.85
6393 7326 7.931578 TCATCAATTTTGGTCCGTATTTAGT 57.068 32.000 0.00 0.00 0.00 2.24
6394 7327 7.981142 TCATCAATTTTGGTCCGTATTTAGTC 58.019 34.615 0.00 0.00 0.00 2.59
6395 7328 6.746745 TCAATTTTGGTCCGTATTTAGTCC 57.253 37.500 0.00 0.00 0.00 3.85
6396 7329 6.239396 TCAATTTTGGTCCGTATTTAGTCCA 58.761 36.000 0.00 0.00 0.00 4.02
6397 7330 6.149807 TCAATTTTGGTCCGTATTTAGTCCAC 59.850 38.462 0.00 0.00 0.00 4.02
6398 7331 4.620589 TTTGGTCCGTATTTAGTCCACA 57.379 40.909 0.00 0.00 0.00 4.17
6399 7332 4.829872 TTGGTCCGTATTTAGTCCACAT 57.170 40.909 0.00 0.00 0.00 3.21
6400 7333 4.829872 TGGTCCGTATTTAGTCCACATT 57.170 40.909 0.00 0.00 0.00 2.71
6401 7334 5.168647 TGGTCCGTATTTAGTCCACATTT 57.831 39.130 0.00 0.00 0.00 2.32
6402 7335 5.562635 TGGTCCGTATTTAGTCCACATTTT 58.437 37.500 0.00 0.00 0.00 1.82
6403 7336 6.005198 TGGTCCGTATTTAGTCCACATTTTT 58.995 36.000 0.00 0.00 0.00 1.94
6454 7387 8.964476 AATTGGAAATGATAGTTACATCGTCT 57.036 30.769 0.00 0.00 0.00 4.18
6466 7399 9.796180 ATAGTTACATCGTCTATAAGAAGAGGT 57.204 33.333 13.11 13.11 46.18 3.85
6468 7401 9.054922 AGTTACATCGTCTATAAGAAGAGGTAC 57.945 37.037 14.03 10.61 44.80 3.34
6469 7402 8.834465 GTTACATCGTCTATAAGAAGAGGTACA 58.166 37.037 14.03 6.32 44.80 2.90
6470 7403 7.876936 ACATCGTCTATAAGAAGAGGTACAA 57.123 36.000 8.09 0.00 43.62 2.41
6471 7404 8.466617 ACATCGTCTATAAGAAGAGGTACAAT 57.533 34.615 8.09 0.00 43.62 2.71
6472 7405 9.570468 ACATCGTCTATAAGAAGAGGTACAATA 57.430 33.333 8.09 0.00 43.62 1.90
6484 7417 8.371699 AGAAGAGGTACAATATTCTTCATAGGC 58.628 37.037 17.62 0.00 44.94 3.93
6485 7418 7.863901 AGAGGTACAATATTCTTCATAGGCT 57.136 36.000 0.00 0.00 0.00 4.58
6486 7419 7.902087 AGAGGTACAATATTCTTCATAGGCTC 58.098 38.462 0.00 0.00 0.00 4.70
6487 7420 7.010339 AGGTACAATATTCTTCATAGGCTCC 57.990 40.000 0.00 0.00 0.00 4.70
6488 7421 6.789959 AGGTACAATATTCTTCATAGGCTCCT 59.210 38.462 0.00 0.00 0.00 3.69
6489 7422 7.038658 AGGTACAATATTCTTCATAGGCTCCTC 60.039 40.741 0.00 0.00 0.00 3.71
6490 7423 6.753913 ACAATATTCTTCATAGGCTCCTCA 57.246 37.500 0.00 0.00 0.00 3.86
6491 7424 7.141758 ACAATATTCTTCATAGGCTCCTCAA 57.858 36.000 0.00 0.00 0.00 3.02
6492 7425 7.577303 ACAATATTCTTCATAGGCTCCTCAAA 58.423 34.615 0.00 0.00 0.00 2.69
6493 7426 7.500559 ACAATATTCTTCATAGGCTCCTCAAAC 59.499 37.037 0.00 0.00 0.00 2.93
6494 7427 3.914426 TCTTCATAGGCTCCTCAAACC 57.086 47.619 0.00 0.00 0.00 3.27
6495 7428 3.181329 TCTTCATAGGCTCCTCAAACCA 58.819 45.455 0.00 0.00 0.00 3.67
6496 7429 3.587061 TCTTCATAGGCTCCTCAAACCAA 59.413 43.478 0.00 0.00 0.00 3.67
6497 7430 4.228210 TCTTCATAGGCTCCTCAAACCAAT 59.772 41.667 0.00 0.00 0.00 3.16
6498 7431 4.156455 TCATAGGCTCCTCAAACCAATC 57.844 45.455 0.00 0.00 0.00 2.67
6499 7432 3.782523 TCATAGGCTCCTCAAACCAATCT 59.217 43.478 0.00 0.00 0.00 2.40
6500 7433 2.797177 AGGCTCCTCAAACCAATCTC 57.203 50.000 0.00 0.00 0.00 2.75
6501 7434 2.273619 AGGCTCCTCAAACCAATCTCT 58.726 47.619 0.00 0.00 0.00 3.10
6502 7435 3.454858 AGGCTCCTCAAACCAATCTCTA 58.545 45.455 0.00 0.00 0.00 2.43
6503 7436 3.454082 AGGCTCCTCAAACCAATCTCTAG 59.546 47.826 0.00 0.00 0.00 2.43
6504 7437 3.198853 GGCTCCTCAAACCAATCTCTAGT 59.801 47.826 0.00 0.00 0.00 2.57
6505 7438 4.323868 GGCTCCTCAAACCAATCTCTAGTT 60.324 45.833 0.00 0.00 0.00 2.24
6506 7439 5.104900 GGCTCCTCAAACCAATCTCTAGTTA 60.105 44.000 0.00 0.00 0.00 2.24
6507 7440 5.813157 GCTCCTCAAACCAATCTCTAGTTAC 59.187 44.000 0.00 0.00 0.00 2.50
6508 7441 6.574465 GCTCCTCAAACCAATCTCTAGTTACA 60.574 42.308 0.00 0.00 0.00 2.41
6509 7442 6.936279 TCCTCAAACCAATCTCTAGTTACAG 58.064 40.000 0.00 0.00 0.00 2.74
6510 7443 6.724441 TCCTCAAACCAATCTCTAGTTACAGA 59.276 38.462 0.00 0.00 0.00 3.41
6511 7444 7.234782 TCCTCAAACCAATCTCTAGTTACAGAA 59.765 37.037 0.00 0.00 0.00 3.02
6512 7445 7.547370 CCTCAAACCAATCTCTAGTTACAGAAG 59.453 40.741 0.00 0.00 0.00 2.85
6513 7446 6.874134 TCAAACCAATCTCTAGTTACAGAAGC 59.126 38.462 0.00 0.00 0.00 3.86
6514 7447 6.613153 AACCAATCTCTAGTTACAGAAGCT 57.387 37.500 0.00 0.00 0.00 3.74
6515 7448 6.613153 ACCAATCTCTAGTTACAGAAGCTT 57.387 37.500 0.00 0.00 0.00 3.74
6516 7449 7.010339 ACCAATCTCTAGTTACAGAAGCTTT 57.990 36.000 0.00 0.00 0.00 3.51
6517 7450 7.454225 ACCAATCTCTAGTTACAGAAGCTTTT 58.546 34.615 0.00 0.00 0.00 2.27
6518 7451 7.389053 ACCAATCTCTAGTTACAGAAGCTTTTG 59.611 37.037 15.05 15.05 0.00 2.44
6540 7473 2.035530 AGCCTAGCAAGTTCATGAGC 57.964 50.000 0.50 0.50 0.00 4.26
6541 7474 1.280133 AGCCTAGCAAGTTCATGAGCA 59.720 47.619 12.41 0.00 0.00 4.26
6542 7475 2.086869 GCCTAGCAAGTTCATGAGCAA 58.913 47.619 12.41 0.00 0.00 3.91
6543 7476 2.159462 GCCTAGCAAGTTCATGAGCAAC 60.159 50.000 12.41 0.00 0.00 4.17
6544 7477 2.421424 CCTAGCAAGTTCATGAGCAACC 59.579 50.000 12.41 0.00 0.00 3.77
6545 7478 2.283145 AGCAAGTTCATGAGCAACCT 57.717 45.000 12.41 1.63 0.00 3.50
6546 7479 2.590821 AGCAAGTTCATGAGCAACCTT 58.409 42.857 12.41 0.84 0.00 3.50
6547 7480 3.754965 AGCAAGTTCATGAGCAACCTTA 58.245 40.909 12.41 0.00 0.00 2.69
6548 7481 4.338879 AGCAAGTTCATGAGCAACCTTAT 58.661 39.130 12.41 0.00 0.00 1.73
6549 7482 4.768968 AGCAAGTTCATGAGCAACCTTATT 59.231 37.500 12.41 0.00 0.00 1.40
6550 7483 5.945784 AGCAAGTTCATGAGCAACCTTATTA 59.054 36.000 12.41 0.00 0.00 0.98
6551 7484 6.094603 AGCAAGTTCATGAGCAACCTTATTAG 59.905 38.462 12.41 0.00 0.00 1.73
6552 7485 6.261118 CAAGTTCATGAGCAACCTTATTAGC 58.739 40.000 12.41 0.00 0.00 3.09
6553 7486 5.749462 AGTTCATGAGCAACCTTATTAGCT 58.251 37.500 12.41 0.00 40.60 3.32
6554 7487 6.889198 AGTTCATGAGCAACCTTATTAGCTA 58.111 36.000 12.41 0.00 37.48 3.32
6555 7488 6.763610 AGTTCATGAGCAACCTTATTAGCTAC 59.236 38.462 12.41 0.00 37.48 3.58
6556 7489 5.611374 TCATGAGCAACCTTATTAGCTACC 58.389 41.667 0.00 0.00 37.48 3.18
6557 7490 4.417426 TGAGCAACCTTATTAGCTACCC 57.583 45.455 0.00 0.00 37.48 3.69
6558 7491 4.037927 TGAGCAACCTTATTAGCTACCCT 58.962 43.478 0.00 0.00 37.48 4.34
6559 7492 5.213519 TGAGCAACCTTATTAGCTACCCTA 58.786 41.667 0.00 0.00 37.48 3.53
6560 7493 5.844516 TGAGCAACCTTATTAGCTACCCTAT 59.155 40.000 0.00 0.00 37.48 2.57
6561 7494 6.329197 TGAGCAACCTTATTAGCTACCCTATT 59.671 38.462 0.00 0.00 37.48 1.73
6562 7495 7.511371 TGAGCAACCTTATTAGCTACCCTATTA 59.489 37.037 0.00 0.00 37.48 0.98
6563 7496 8.450780 AGCAACCTTATTAGCTACCCTATTAT 57.549 34.615 0.00 0.00 35.19 1.28
6564 7497 9.556772 AGCAACCTTATTAGCTACCCTATTATA 57.443 33.333 0.00 0.00 35.19 0.98
6592 7525 9.734620 TGTTCAAATCTAGTCAACAGAAAATTG 57.265 29.630 0.00 0.00 0.00 2.32
6593 7526 8.694394 GTTCAAATCTAGTCAACAGAAAATTGC 58.306 33.333 0.00 0.00 0.00 3.56
6594 7527 7.939782 TCAAATCTAGTCAACAGAAAATTGCA 58.060 30.769 0.00 0.00 0.00 4.08
6595 7528 8.579006 TCAAATCTAGTCAACAGAAAATTGCAT 58.421 29.630 0.00 0.00 0.00 3.96
6596 7529 8.644619 CAAATCTAGTCAACAGAAAATTGCATG 58.355 33.333 0.00 0.00 0.00 4.06
6597 7530 5.702865 TCTAGTCAACAGAAAATTGCATGC 58.297 37.500 11.82 11.82 0.00 4.06
6598 7531 3.656559 AGTCAACAGAAAATTGCATGCC 58.343 40.909 16.68 0.00 0.00 4.40
6599 7532 3.069872 AGTCAACAGAAAATTGCATGCCA 59.930 39.130 16.68 4.04 0.00 4.92
6600 7533 3.998341 GTCAACAGAAAATTGCATGCCAT 59.002 39.130 16.68 6.88 0.00 4.40
6601 7534 3.997681 TCAACAGAAAATTGCATGCCATG 59.002 39.130 16.68 0.00 0.00 3.66
6602 7535 3.965379 ACAGAAAATTGCATGCCATGA 57.035 38.095 16.68 0.00 0.00 3.07
6603 7536 4.274602 ACAGAAAATTGCATGCCATGAA 57.725 36.364 16.68 2.46 0.00 2.57
6604 7537 4.250464 ACAGAAAATTGCATGCCATGAAG 58.750 39.130 16.68 0.92 0.00 3.02
6605 7538 4.250464 CAGAAAATTGCATGCCATGAAGT 58.750 39.130 16.68 0.00 0.00 3.01
6606 7539 5.047164 ACAGAAAATTGCATGCCATGAAGTA 60.047 36.000 16.68 0.00 0.00 2.24
6607 7540 5.518847 CAGAAAATTGCATGCCATGAAGTAG 59.481 40.000 16.68 0.00 0.00 2.57
6608 7541 3.447918 AATTGCATGCCATGAAGTAGC 57.552 42.857 16.68 0.00 0.00 3.58
6609 7542 1.836802 TTGCATGCCATGAAGTAGCA 58.163 45.000 16.68 0.00 41.50 3.49
6610 7543 1.836802 TGCATGCCATGAAGTAGCAA 58.163 45.000 16.68 0.00 40.46 3.91
6611 7544 2.380941 TGCATGCCATGAAGTAGCAAT 58.619 42.857 16.68 0.00 40.46 3.56
6612 7545 2.359848 TGCATGCCATGAAGTAGCAATC 59.640 45.455 16.68 0.00 40.46 2.67
6613 7546 2.288030 GCATGCCATGAAGTAGCAATCC 60.288 50.000 9.33 0.00 40.46 3.01
6614 7547 3.220110 CATGCCATGAAGTAGCAATCCT 58.780 45.455 0.00 0.00 40.46 3.24
6615 7548 2.923121 TGCCATGAAGTAGCAATCCTC 58.077 47.619 0.00 0.00 32.56 3.71
6616 7549 1.869767 GCCATGAAGTAGCAATCCTCG 59.130 52.381 0.00 0.00 0.00 4.63
6617 7550 2.483714 GCCATGAAGTAGCAATCCTCGA 60.484 50.000 0.00 0.00 0.00 4.04
6618 7551 3.797039 CCATGAAGTAGCAATCCTCGAA 58.203 45.455 0.00 0.00 0.00 3.71
6619 7552 4.384056 CCATGAAGTAGCAATCCTCGAAT 58.616 43.478 0.00 0.00 0.00 3.34
6620 7553 5.541845 CCATGAAGTAGCAATCCTCGAATA 58.458 41.667 0.00 0.00 0.00 1.75
6621 7554 6.169094 CCATGAAGTAGCAATCCTCGAATAT 58.831 40.000 0.00 0.00 0.00 1.28
6622 7555 6.652481 CCATGAAGTAGCAATCCTCGAATATT 59.348 38.462 0.00 0.00 0.00 1.28
6623 7556 7.360691 CCATGAAGTAGCAATCCTCGAATATTG 60.361 40.741 12.75 12.75 36.40 1.90
6627 7560 2.601481 CAATCCTCGAATATTGCCGC 57.399 50.000 6.49 0.00 0.00 6.53
6628 7561 1.197721 CAATCCTCGAATATTGCCGCC 59.802 52.381 6.49 0.00 0.00 6.13
6629 7562 0.670546 ATCCTCGAATATTGCCGCCG 60.671 55.000 0.00 0.00 0.00 6.46
6630 7563 2.551270 CTCGAATATTGCCGCCGC 59.449 61.111 0.00 0.00 0.00 6.53
6631 7564 2.202946 TCGAATATTGCCGCCGCA 60.203 55.556 0.00 0.00 45.49 5.69
6645 7578 3.864686 CGCAACTCCCGCCGATTG 61.865 66.667 0.00 0.00 0.00 2.67
6646 7579 2.746277 GCAACTCCCGCCGATTGT 60.746 61.111 0.00 0.00 0.00 2.71
6647 7580 2.750888 GCAACTCCCGCCGATTGTC 61.751 63.158 0.00 0.00 0.00 3.18
6648 7581 2.106683 CAACTCCCGCCGATTGTCC 61.107 63.158 0.00 0.00 0.00 4.02
6649 7582 3.325201 AACTCCCGCCGATTGTCCC 62.325 63.158 0.00 0.00 0.00 4.46
6650 7583 3.470888 CTCCCGCCGATTGTCCCT 61.471 66.667 0.00 0.00 0.00 4.20
6651 7584 3.447025 CTCCCGCCGATTGTCCCTC 62.447 68.421 0.00 0.00 0.00 4.30
6652 7585 3.781307 CCCGCCGATTGTCCCTCA 61.781 66.667 0.00 0.00 0.00 3.86
6653 7586 2.505982 CCGCCGATTGTCCCTCAT 59.494 61.111 0.00 0.00 0.00 2.90
6654 7587 1.153168 CCGCCGATTGTCCCTCATT 60.153 57.895 0.00 0.00 0.00 2.57
6655 7588 1.160329 CCGCCGATTGTCCCTCATTC 61.160 60.000 0.00 0.00 0.00 2.67
6656 7589 0.179073 CGCCGATTGTCCCTCATTCT 60.179 55.000 0.00 0.00 0.00 2.40
6657 7590 1.743772 CGCCGATTGTCCCTCATTCTT 60.744 52.381 0.00 0.00 0.00 2.52
6658 7591 1.943340 GCCGATTGTCCCTCATTCTTC 59.057 52.381 0.00 0.00 0.00 2.87
6659 7592 2.680805 GCCGATTGTCCCTCATTCTTCA 60.681 50.000 0.00 0.00 0.00 3.02
6660 7593 3.813443 CCGATTGTCCCTCATTCTTCAT 58.187 45.455 0.00 0.00 0.00 2.57
6661 7594 4.202441 CCGATTGTCCCTCATTCTTCATT 58.798 43.478 0.00 0.00 0.00 2.57
6662 7595 4.036027 CCGATTGTCCCTCATTCTTCATTG 59.964 45.833 0.00 0.00 0.00 2.82
6663 7596 4.637534 CGATTGTCCCTCATTCTTCATTGT 59.362 41.667 0.00 0.00 0.00 2.71
6664 7597 5.448225 CGATTGTCCCTCATTCTTCATTGTG 60.448 44.000 0.00 0.00 0.00 3.33
6665 7598 4.371624 TGTCCCTCATTCTTCATTGTGT 57.628 40.909 0.00 0.00 0.00 3.72
6666 7599 4.326826 TGTCCCTCATTCTTCATTGTGTC 58.673 43.478 0.00 0.00 0.00 3.67
6667 7600 4.202451 TGTCCCTCATTCTTCATTGTGTCA 60.202 41.667 0.00 0.00 0.00 3.58
6668 7601 4.761739 GTCCCTCATTCTTCATTGTGTCAA 59.238 41.667 0.00 0.00 0.00 3.18
6669 7602 5.416952 GTCCCTCATTCTTCATTGTGTCAAT 59.583 40.000 0.00 0.00 0.00 2.57
6670 7603 5.416639 TCCCTCATTCTTCATTGTGTCAATG 59.583 40.000 14.05 14.05 0.00 2.82
6671 7604 5.416639 CCCTCATTCTTCATTGTGTCAATGA 59.583 40.000 17.54 17.54 35.08 2.57
6672 7605 6.320171 CCTCATTCTTCATTGTGTCAATGAC 58.680 40.000 20.11 6.41 36.49 3.06
6673 7606 6.150641 CCTCATTCTTCATTGTGTCAATGACT 59.849 38.462 20.11 7.19 36.49 3.41
6674 7607 7.309012 CCTCATTCTTCATTGTGTCAATGACTT 60.309 37.037 20.11 7.05 36.49 3.01
6675 7608 7.587629 TCATTCTTCATTGTGTCAATGACTTC 58.412 34.615 20.11 8.32 36.49 3.01
6676 7609 5.947228 TCTTCATTGTGTCAATGACTTCC 57.053 39.130 20.11 3.45 36.49 3.46
6677 7610 5.375773 TCTTCATTGTGTCAATGACTTCCA 58.624 37.500 20.11 5.98 36.49 3.53
6678 7611 6.005823 TCTTCATTGTGTCAATGACTTCCAT 58.994 36.000 20.11 3.02 36.49 3.41
6679 7612 7.167535 TCTTCATTGTGTCAATGACTTCCATA 58.832 34.615 20.11 7.35 36.49 2.74
6680 7613 7.830697 TCTTCATTGTGTCAATGACTTCCATAT 59.169 33.333 20.11 3.59 36.49 1.78
6681 7614 7.943079 TCATTGTGTCAATGACTTCCATATT 57.057 32.000 14.97 0.00 34.45 1.28
6682 7615 9.460019 TTCATTGTGTCAATGACTTCCATATTA 57.540 29.630 20.11 4.18 36.49 0.98
6683 7616 9.631257 TCATTGTGTCAATGACTTCCATATTAT 57.369 29.630 14.97 0.00 34.45 1.28
6684 7617 9.888878 CATTGTGTCAATGACTTCCATATTATC 57.111 33.333 14.97 0.00 34.45 1.75
6685 7618 9.631257 ATTGTGTCAATGACTTCCATATTATCA 57.369 29.630 14.97 0.00 34.45 2.15
6686 7619 8.667076 TGTGTCAATGACTTCCATATTATCAG 57.333 34.615 14.97 0.00 34.45 2.90
6687 7620 8.485392 TGTGTCAATGACTTCCATATTATCAGA 58.515 33.333 14.97 0.00 34.45 3.27
6688 7621 8.986847 GTGTCAATGACTTCCATATTATCAGAG 58.013 37.037 14.97 0.00 34.45 3.35
6689 7622 8.708378 TGTCAATGACTTCCATATTATCAGAGT 58.292 33.333 14.97 0.00 34.45 3.24
6690 7623 9.553064 GTCAATGACTTCCATATTATCAGAGTT 57.447 33.333 6.07 0.00 34.45 3.01
6707 7640 8.804688 ATCAGAGTTAATAGTAAGACGATTGC 57.195 34.615 0.00 0.00 0.00 3.56
6708 7641 7.768240 TCAGAGTTAATAGTAAGACGATTGCA 58.232 34.615 0.00 0.00 0.00 4.08
6709 7642 8.414003 TCAGAGTTAATAGTAAGACGATTGCAT 58.586 33.333 0.00 0.00 0.00 3.96
6710 7643 8.695284 CAGAGTTAATAGTAAGACGATTGCATC 58.305 37.037 0.00 0.00 0.00 3.91
6711 7644 7.868415 AGAGTTAATAGTAAGACGATTGCATCC 59.132 37.037 0.00 0.00 0.00 3.51
6712 7645 6.929606 AGTTAATAGTAAGACGATTGCATCCC 59.070 38.462 0.00 0.00 0.00 3.85
6713 7646 4.955811 ATAGTAAGACGATTGCATCCCA 57.044 40.909 0.00 0.00 0.00 4.37
6714 7647 3.845781 AGTAAGACGATTGCATCCCAT 57.154 42.857 0.00 0.00 0.00 4.00
6715 7648 3.733337 AGTAAGACGATTGCATCCCATC 58.267 45.455 0.00 0.00 0.00 3.51
6716 7649 3.389329 AGTAAGACGATTGCATCCCATCT 59.611 43.478 0.00 0.00 0.00 2.90
6717 7650 3.287867 AAGACGATTGCATCCCATCTT 57.712 42.857 0.00 0.00 0.00 2.40
6718 7651 3.287867 AGACGATTGCATCCCATCTTT 57.712 42.857 0.00 0.00 0.00 2.52
6719 7652 3.624777 AGACGATTGCATCCCATCTTTT 58.375 40.909 0.00 0.00 0.00 2.27
6720 7653 4.780815 AGACGATTGCATCCCATCTTTTA 58.219 39.130 0.00 0.00 0.00 1.52
6721 7654 5.380043 AGACGATTGCATCCCATCTTTTAT 58.620 37.500 0.00 0.00 0.00 1.40
6722 7655 5.240183 AGACGATTGCATCCCATCTTTTATG 59.760 40.000 0.00 0.00 0.00 1.90
6723 7656 4.232221 CGATTGCATCCCATCTTTTATGC 58.768 43.478 0.00 0.00 43.92 3.14
6727 7660 4.924305 GCATCCCATCTTTTATGCAAGA 57.076 40.909 0.00 0.00 43.30 3.02
6728 7661 5.266733 GCATCCCATCTTTTATGCAAGAA 57.733 39.130 0.00 0.00 43.30 2.52
6729 7662 5.850614 GCATCCCATCTTTTATGCAAGAAT 58.149 37.500 0.00 0.00 43.30 2.40
6730 7663 6.285990 GCATCCCATCTTTTATGCAAGAATT 58.714 36.000 0.00 0.00 43.30 2.17
6731 7664 7.436118 GCATCCCATCTTTTATGCAAGAATTA 58.564 34.615 0.00 0.00 43.30 1.40
6732 7665 7.927629 GCATCCCATCTTTTATGCAAGAATTAA 59.072 33.333 0.00 0.00 43.30 1.40
6733 7666 9.820725 CATCCCATCTTTTATGCAAGAATTAAA 57.179 29.630 0.00 0.00 36.36 1.52
6734 7667 9.822185 ATCCCATCTTTTATGCAAGAATTAAAC 57.178 29.630 0.00 0.00 36.36 2.01
6735 7668 8.257306 TCCCATCTTTTATGCAAGAATTAAACC 58.743 33.333 0.00 0.00 36.36 3.27
6736 7669 8.040132 CCCATCTTTTATGCAAGAATTAAACCA 58.960 33.333 0.00 0.00 36.36 3.67
6737 7670 9.434420 CCATCTTTTATGCAAGAATTAAACCAA 57.566 29.630 0.00 0.00 36.36 3.67
6740 7673 9.267084 TCTTTTATGCAAGAATTAAACCAAACC 57.733 29.630 0.00 0.00 29.41 3.27
6741 7674 9.271828 CTTTTATGCAAGAATTAAACCAAACCT 57.728 29.630 0.00 0.00 0.00 3.50
6744 7677 9.921637 TTATGCAAGAATTAAACCAAACCTAAG 57.078 29.630 0.00 0.00 0.00 2.18
6745 7678 7.589958 TGCAAGAATTAAACCAAACCTAAGA 57.410 32.000 0.00 0.00 0.00 2.10
6746 7679 7.657336 TGCAAGAATTAAACCAAACCTAAGAG 58.343 34.615 0.00 0.00 0.00 2.85
6747 7680 6.586463 GCAAGAATTAAACCAAACCTAAGAGC 59.414 38.462 0.00 0.00 0.00 4.09
6748 7681 6.835819 AGAATTAAACCAAACCTAAGAGCC 57.164 37.500 0.00 0.00 0.00 4.70
6749 7682 6.311735 AGAATTAAACCAAACCTAAGAGCCA 58.688 36.000 0.00 0.00 0.00 4.75
6750 7683 6.954102 AGAATTAAACCAAACCTAAGAGCCAT 59.046 34.615 0.00 0.00 0.00 4.40
6751 7684 6.775594 ATTAAACCAAACCTAAGAGCCATC 57.224 37.500 0.00 0.00 0.00 3.51
6752 7685 2.403252 ACCAAACCTAAGAGCCATCG 57.597 50.000 0.00 0.00 0.00 3.84
6753 7686 1.017387 CCAAACCTAAGAGCCATCGC 58.983 55.000 0.00 0.00 0.00 4.58
6762 7695 2.667418 AGCCATCGCTTCTGCTGT 59.333 55.556 0.00 0.00 45.55 4.40
6763 7696 1.002868 AGCCATCGCTTCTGCTGTT 60.003 52.632 0.00 0.00 45.55 3.16
6764 7697 0.250234 AGCCATCGCTTCTGCTGTTA 59.750 50.000 0.00 0.00 45.55 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 5.352284 AGACATAGCTTGTGTATGTGCTAC 58.648 41.667 3.80 0.00 40.47 3.58
81 82 2.125673 GAGTATGTGGCGCGGTGT 60.126 61.111 8.83 0.00 0.00 4.16
82 83 2.852495 AAGGAGTATGTGGCGCGGTG 62.852 60.000 8.83 0.00 0.00 4.94
89 90 3.495100 GCATAGGGTGAAGGAGTATGTGG 60.495 52.174 0.00 0.00 0.00 4.17
90 91 3.389329 AGCATAGGGTGAAGGAGTATGTG 59.611 47.826 0.00 0.00 0.00 3.21
91 92 3.658725 AGCATAGGGTGAAGGAGTATGT 58.341 45.455 0.00 0.00 0.00 2.29
92 93 5.719085 AGATAGCATAGGGTGAAGGAGTATG 59.281 44.000 0.00 0.00 0.00 2.39
93 94 5.909760 AGATAGCATAGGGTGAAGGAGTAT 58.090 41.667 0.00 0.00 0.00 2.12
94 95 5.162980 TGAGATAGCATAGGGTGAAGGAGTA 60.163 44.000 0.00 0.00 0.00 2.59
95 96 4.156477 GAGATAGCATAGGGTGAAGGAGT 58.844 47.826 0.00 0.00 0.00 3.85
103 104 3.384168 TGGTTGTGAGATAGCATAGGGT 58.616 45.455 0.00 0.00 0.00 4.34
104 105 4.321718 CATGGTTGTGAGATAGCATAGGG 58.678 47.826 0.00 0.00 31.76 3.53
120 121 5.343249 GCAAGAAATTCTAATCGCATGGTT 58.657 37.500 0.00 0.00 0.00 3.67
134 135 2.420058 CCGGTAGGAGGCAAGAAATT 57.580 50.000 0.00 0.00 41.02 1.82
152 153 4.033894 CATACCTGCAGTAGCGCC 57.966 61.111 13.81 0.00 46.23 6.53
212 213 2.985282 TCCTGCCAGCAAAAGCCG 60.985 61.111 0.00 0.00 0.00 5.52
300 304 3.194116 TCATTTTTAGGTAGTCGTCGCCT 59.806 43.478 4.62 4.62 36.47 5.52
368 372 4.135153 CACGCACCCTCCGAGGAG 62.135 72.222 16.69 12.06 37.67 3.69
412 416 1.523154 GGACAAGCGCCAATGAACCA 61.523 55.000 2.29 0.00 0.00 3.67
467 471 2.602878 ACTTGTAGACATACCAACGCG 58.397 47.619 3.53 3.53 0.00 6.01
485 489 8.035394 TGAAGCTAAGATTTGAAGTATCGAACT 58.965 33.333 0.00 0.00 41.49 3.01
489 493 6.018669 GGGTGAAGCTAAGATTTGAAGTATCG 60.019 42.308 0.00 0.00 0.00 2.92
499 503 3.197766 TGTCGATGGGTGAAGCTAAGATT 59.802 43.478 0.00 0.00 0.00 2.40
505 509 0.396435 TGTTGTCGATGGGTGAAGCT 59.604 50.000 0.00 0.00 0.00 3.74
517 521 4.890378 CAACTGAATAGCATCTGTTGTCG 58.110 43.478 19.45 4.69 46.03 4.35
535 539 0.882042 CTCACAGAACCAGCGCAACT 60.882 55.000 11.47 0.00 0.00 3.16
537 541 1.597854 CCTCACAGAACCAGCGCAA 60.598 57.895 11.47 0.00 0.00 4.85
547 551 1.905637 TCGTGCTAAGACCTCACAGA 58.094 50.000 0.00 0.00 0.00 3.41
556 560 3.007635 TCGAGAAGTCATCGTGCTAAGA 58.992 45.455 0.00 0.00 40.95 2.10
630 635 1.838913 CAAGCCGAAAAGTGTGTTGG 58.161 50.000 0.00 0.00 0.00 3.77
635 640 0.307760 CGAAGCAAGCCGAAAAGTGT 59.692 50.000 0.00 0.00 0.00 3.55
636 641 0.307760 ACGAAGCAAGCCGAAAAGTG 59.692 50.000 0.00 0.00 0.00 3.16
637 642 1.529865 GTACGAAGCAAGCCGAAAAGT 59.470 47.619 0.00 0.00 0.00 2.66
656 662 3.015327 CCACCTAGCTACGACTACAAGT 58.985 50.000 0.00 0.00 0.00 3.16
668 674 1.005687 AGAACCGTAGACCACCTAGCT 59.994 52.381 0.00 0.00 0.00 3.32
693 699 8.854614 AGAACAGCAGAAGTAGTGAAAATTAT 57.145 30.769 0.00 0.00 0.00 1.28
759 766 8.149973 TCTAAAAACACGAGACATAGCTTTTT 57.850 30.769 0.00 0.00 0.00 1.94
760 767 7.724305 TCTAAAAACACGAGACATAGCTTTT 57.276 32.000 0.00 0.00 0.00 2.27
846 861 0.317938 AGTCGTTCGTGTCTGTCAGC 60.318 55.000 0.00 0.00 0.00 4.26
867 882 1.432270 CGCGAGATCTGGCTTTTCCC 61.432 60.000 24.73 0.00 31.84 3.97
921 936 0.179086 GCTGCCTGCTTACTCTCCTC 60.179 60.000 0.00 0.00 38.95 3.71
922 937 0.906756 TGCTGCCTGCTTACTCTCCT 60.907 55.000 0.00 0.00 43.37 3.69
923 938 0.461693 CTGCTGCCTGCTTACTCTCC 60.462 60.000 0.00 0.00 43.37 3.71
967 983 0.392729 CCTTCCTTCTGCTGCTCCTG 60.393 60.000 0.00 0.00 0.00 3.86
1125 1144 2.805546 CGAAGAGATCCGGCCGAA 59.194 61.111 30.73 6.63 0.00 4.30
1201 1220 4.408821 AGGCCCGCAAATCGCAGA 62.409 61.111 0.00 0.00 42.60 4.26
1371 1393 2.988010 ATTGCTACGCTGATCCTTGA 57.012 45.000 0.00 0.00 0.00 3.02
1373 1395 4.960938 TCATAATTGCTACGCTGATCCTT 58.039 39.130 0.00 0.00 0.00 3.36
1374 1396 4.281941 TCTCATAATTGCTACGCTGATCCT 59.718 41.667 0.00 0.00 0.00 3.24
1375 1397 4.560128 TCTCATAATTGCTACGCTGATCC 58.440 43.478 0.00 0.00 0.00 3.36
1376 1398 4.624882 CCTCTCATAATTGCTACGCTGATC 59.375 45.833 0.00 0.00 0.00 2.92
1377 1399 4.564041 CCTCTCATAATTGCTACGCTGAT 58.436 43.478 0.00 0.00 0.00 2.90
1480 1511 1.001641 GCTCCCAGCTCATTGGTGT 60.002 57.895 0.00 0.00 42.19 4.16
1620 1651 3.415212 TCCCAGATGAAGAACAAAGCAG 58.585 45.455 0.00 0.00 0.00 4.24
2046 2078 6.260050 ACAATGAACACGACAGAACATAAGTT 59.740 34.615 0.00 0.00 41.64 2.66
2051 2083 5.499139 AAACAATGAACACGACAGAACAT 57.501 34.783 0.00 0.00 0.00 2.71
2063 2103 6.569780 ACCACAAGTAAAGGAAACAATGAAC 58.430 36.000 0.00 0.00 0.00 3.18
2122 2162 6.759356 GGTGCTACTCTAGGAAGAAAATTCTC 59.241 42.308 0.00 0.00 36.28 2.87
2150 2190 4.523943 TGCATAGTGAACATTTTCTTGCCT 59.476 37.500 0.00 0.00 32.36 4.75
2167 2207 4.635223 TGTGCTATCTTTAGGCTGCATAG 58.365 43.478 0.50 0.00 32.98 2.23
2190 2230 7.425224 AACAGGTAGTATCATCTAAAGTGCT 57.575 36.000 0.00 0.00 0.00 4.40
2205 2245 4.163649 GGGGCTATTGAGTAAACAGGTAGT 59.836 45.833 0.00 0.00 0.00 2.73
2215 2255 1.819753 ATGCAGGGGGCTATTGAGTA 58.180 50.000 0.00 0.00 45.15 2.59
2219 2259 1.779221 TTGAATGCAGGGGGCTATTG 58.221 50.000 0.00 0.00 45.15 1.90
2225 2265 3.322828 CCTCATATTTTGAATGCAGGGGG 59.677 47.826 0.00 0.00 32.78 5.40
2326 2367 2.331166 GATAAAGGGAGGGAGGGAGAC 58.669 57.143 0.00 0.00 0.00 3.36
2330 2371 2.198334 AGTGATAAAGGGAGGGAGGG 57.802 55.000 0.00 0.00 0.00 4.30
2405 2477 3.734344 AGGGAGATGGTAGAGGGAAAT 57.266 47.619 0.00 0.00 0.00 2.17
2410 2482 1.723288 GGGAAGGGAGATGGTAGAGG 58.277 60.000 0.00 0.00 0.00 3.69
2430 2502 7.364585 CCAGCCTTAGATAATAAGAGAGATGGG 60.365 44.444 0.00 0.00 0.00 4.00
2431 2503 7.398618 TCCAGCCTTAGATAATAAGAGAGATGG 59.601 40.741 0.00 0.00 0.00 3.51
2432 2504 8.359875 TCCAGCCTTAGATAATAAGAGAGATG 57.640 38.462 0.00 0.00 0.00 2.90
2433 2505 8.964533 TTCCAGCCTTAGATAATAAGAGAGAT 57.035 34.615 0.00 0.00 0.00 2.75
2434 2506 8.811017 CATTCCAGCCTTAGATAATAAGAGAGA 58.189 37.037 0.00 0.00 0.00 3.10
2435 2507 7.548780 GCATTCCAGCCTTAGATAATAAGAGAG 59.451 40.741 0.00 0.00 0.00 3.20
2436 2508 7.390027 GCATTCCAGCCTTAGATAATAAGAGA 58.610 38.462 0.00 0.00 0.00 3.10
2437 2509 7.608308 GCATTCCAGCCTTAGATAATAAGAG 57.392 40.000 0.00 0.00 0.00 2.85
2460 2532 1.555967 TCCCATAAACAAAGCTGGGC 58.444 50.000 1.46 0.00 46.64 5.36
2462 2534 5.105228 ACATTGATCCCATAAACAAAGCTGG 60.105 40.000 0.00 0.00 0.00 4.85
2463 2535 5.969423 ACATTGATCCCATAAACAAAGCTG 58.031 37.500 0.00 0.00 0.00 4.24
2464 2536 6.610075 AACATTGATCCCATAAACAAAGCT 57.390 33.333 0.00 0.00 0.00 3.74
2465 2537 6.873076 TGAAACATTGATCCCATAAACAAAGC 59.127 34.615 0.00 0.00 0.00 3.51
2466 2538 8.830201 TTGAAACATTGATCCCATAAACAAAG 57.170 30.769 0.00 0.00 0.00 2.77
2467 2539 9.434420 GATTGAAACATTGATCCCATAAACAAA 57.566 29.630 0.00 0.00 0.00 2.83
2497 3012 8.970691 TTTGCTCAAAATTTCTACAGAATAGC 57.029 30.769 0.00 0.00 33.54 2.97
2541 3056 1.410004 TAGAAGATCGGCGGGTCAAT 58.590 50.000 7.21 0.00 0.00 2.57
2582 3097 6.690194 ATGAAGCACAAAATAGTCAGGATC 57.310 37.500 0.00 0.00 0.00 3.36
2665 3180 3.627577 GGATATGTACAAACAGTGGCAGG 59.372 47.826 0.00 0.00 39.49 4.85
2669 3184 4.640201 CCTTGGGATATGTACAAACAGTGG 59.360 45.833 0.00 0.00 39.49 4.00
2726 3242 7.222224 CCAAAGTACCGTAAGAATCACTGATAC 59.778 40.741 0.00 0.00 43.02 2.24
2734 3250 4.737054 TCGACCAAAGTACCGTAAGAATC 58.263 43.478 0.00 0.00 43.02 2.52
2742 3258 5.006358 CCATTATTCTTCGACCAAAGTACCG 59.994 44.000 0.00 0.00 0.00 4.02
3097 3613 5.756347 TCGATGGATAGGTTTTTGGTAATCG 59.244 40.000 0.00 0.00 35.68 3.34
3209 3725 1.202330 AGATAAGCTCAGCTGCCAGT 58.798 50.000 9.47 0.00 39.62 4.00
3210 3726 2.288948 CCTAGATAAGCTCAGCTGCCAG 60.289 54.545 9.47 3.05 39.62 4.85
3211 3727 1.690893 CCTAGATAAGCTCAGCTGCCA 59.309 52.381 9.47 0.00 39.62 4.92
3212 3728 1.001860 CCCTAGATAAGCTCAGCTGCC 59.998 57.143 9.47 2.10 39.62 4.85
3213 3729 1.607767 GCCCTAGATAAGCTCAGCTGC 60.608 57.143 9.47 0.00 39.62 5.25
3214 3730 1.001860 GGCCCTAGATAAGCTCAGCTG 59.998 57.143 7.63 7.63 39.62 4.24
3215 3731 1.347062 GGCCCTAGATAAGCTCAGCT 58.653 55.000 0.00 0.00 42.56 4.24
3216 3732 1.001860 CTGGCCCTAGATAAGCTCAGC 59.998 57.143 0.00 0.00 0.00 4.26
3399 3918 5.472148 GTTGAATGATGAAATGAAGGTGCA 58.528 37.500 0.00 0.00 0.00 4.57
3400 3919 4.560035 CGTTGAATGATGAAATGAAGGTGC 59.440 41.667 0.00 0.00 0.00 5.01
3441 3960 7.530426 AGTGAAAACTAGAAATGAGCCATTT 57.470 32.000 11.47 11.47 45.25 2.32
3852 4372 5.614324 TCACGAAGATAATTCCCTGTGAT 57.386 39.130 0.00 0.00 30.82 3.06
4249 4770 5.775195 AGGAATACCTCCCAAACAGAAAAAG 59.225 40.000 0.00 0.00 46.81 2.27
4321 4845 5.934935 AACCACGTCACTTATTTTCGAAT 57.065 34.783 0.00 0.00 0.00 3.34
4337 4861 7.108005 CGTTTCAAATTTGAACTAAAACCACG 58.892 34.615 28.78 26.18 45.99 4.94
4349 4873 3.827722 ACTCCCTCCGTTTCAAATTTGA 58.172 40.909 16.91 16.91 34.92 2.69
4354 4878 3.735591 CAACTACTCCCTCCGTTTCAAA 58.264 45.455 0.00 0.00 0.00 2.69
4374 4898 5.126222 TCAGTGTGAAACCAAACTTTATGCA 59.874 36.000 0.00 0.00 29.87 3.96
4393 4917 4.836125 AGCAGTAAACCAATTGTCAGTG 57.164 40.909 4.43 1.23 0.00 3.66
4394 4918 7.883311 AGTTATAGCAGTAAACCAATTGTCAGT 59.117 33.333 4.43 0.00 0.00 3.41
4440 4964 7.437862 CACCTCTAGAGTAAATGATGAAGAAGC 59.562 40.741 18.42 0.00 0.00 3.86
4532 5057 9.263538 TGAGTGAACAAACATACTAAAACGTAT 57.736 29.630 0.00 0.00 0.00 3.06
4594 5119 8.400947 CCCTCTGTTCACAAATATAAGATGTTG 58.599 37.037 0.00 0.00 0.00 3.33
4645 5170 3.245048 GCCGCAAAATGTAAACATATGCC 59.755 43.478 19.71 9.49 41.94 4.40
4674 5199 9.945904 AAGGGAGTACTTTCTAACAGATTTAAG 57.054 33.333 0.00 0.00 0.00 1.85
4828 5452 0.798776 AAGAAACCTGCATCGAAGCG 59.201 50.000 8.26 3.03 37.31 4.68
4898 5522 2.649331 AGGACAATTACCACTCGACG 57.351 50.000 4.12 0.00 0.00 5.12
4938 5562 4.994852 TGGTGGAAATACGAGTCAAAGAAG 59.005 41.667 0.00 0.00 0.00 2.85
5087 5754 6.696411 AGAATAACTGAACAGGAGTTGAGAG 58.304 40.000 6.76 0.00 40.85 3.20
5089 5756 6.708054 ACAAGAATAACTGAACAGGAGTTGAG 59.292 38.462 6.76 0.00 43.51 3.02
5743 6658 0.608640 ACCGGAAGTACAAGCTCAGG 59.391 55.000 9.46 0.00 0.00 3.86
5881 6811 4.275196 CACAGGCACCAAATATGATCTGAG 59.725 45.833 0.00 0.00 0.00 3.35
5979 6909 3.947834 ACTCAATCCTTGGGCTTAAATCG 59.052 43.478 0.00 0.00 33.25 3.34
6064 6994 4.397417 CAGGTAAAAGAAGCTGATGGAAGG 59.603 45.833 0.00 0.00 45.70 3.46
6074 7004 1.539157 AGCTGGCAGGTAAAAGAAGC 58.461 50.000 19.12 0.00 0.00 3.86
6091 7021 3.133141 AGTGGTGAGAAAGAGGAAAGC 57.867 47.619 0.00 0.00 0.00 3.51
6158 7090 3.641906 AGGCTAAGCAAGTATACCATCGT 59.358 43.478 0.00 0.00 0.00 3.73
6159 7091 4.258702 AGGCTAAGCAAGTATACCATCG 57.741 45.455 0.00 0.00 0.00 3.84
6161 7093 5.131142 ACTGAAGGCTAAGCAAGTATACCAT 59.869 40.000 0.00 0.00 0.00 3.55
6163 7095 5.024785 ACTGAAGGCTAAGCAAGTATACC 57.975 43.478 0.00 0.00 0.00 2.73
6165 7097 9.326413 GAAAATACTGAAGGCTAAGCAAGTATA 57.674 33.333 0.00 0.00 0.00 1.47
6166 7098 7.283354 GGAAAATACTGAAGGCTAAGCAAGTAT 59.717 37.037 0.00 0.00 0.00 2.12
6174 7106 6.374417 AGTCAGGAAAATACTGAAGGCTAA 57.626 37.500 0.00 0.00 45.66 3.09
6178 7110 9.892130 ATTAACTAGTCAGGAAAATACTGAAGG 57.108 33.333 0.00 0.00 45.66 3.46
6218 7151 2.025418 GGTACAAGTGGCGTGACCG 61.025 63.158 0.00 0.00 43.94 4.79
6227 7160 4.320608 AAGGCAACAATTGGTACAAGTG 57.679 40.909 10.83 7.76 42.96 3.16
6234 7167 3.506067 GCTGTACTAAGGCAACAATTGGT 59.494 43.478 10.83 0.00 41.41 3.67
6261 7194 1.343506 GTGTAACCGACTGTAAGCCG 58.656 55.000 0.00 0.00 40.51 5.52
6291 7224 2.979813 CGAAATTTCCCAGACGCAAAAG 59.020 45.455 12.54 0.00 0.00 2.27
6292 7225 2.287909 CCGAAATTTCCCAGACGCAAAA 60.288 45.455 12.54 0.00 0.00 2.44
6295 7228 0.958382 CCCGAAATTTCCCAGACGCA 60.958 55.000 12.54 0.00 0.00 5.24
6301 7234 1.706305 ACTGGTACCCGAAATTTCCCA 59.294 47.619 10.07 11.79 0.00 4.37
6303 7236 4.773013 TCATACTGGTACCCGAAATTTCC 58.227 43.478 10.07 0.00 0.00 3.13
6307 7240 4.287552 ACTCTCATACTGGTACCCGAAAT 58.712 43.478 10.07 0.00 0.00 2.17
6327 7260 2.158143 AGGAACAGAGGGAGTGGTTACT 60.158 50.000 0.00 0.00 40.66 2.24
6328 7261 2.258109 AGGAACAGAGGGAGTGGTTAC 58.742 52.381 0.00 0.00 0.00 2.50
6329 7262 2.715763 AGGAACAGAGGGAGTGGTTA 57.284 50.000 0.00 0.00 0.00 2.85
6330 7263 2.258109 GTAGGAACAGAGGGAGTGGTT 58.742 52.381 0.00 0.00 0.00 3.67
6331 7264 1.891450 CGTAGGAACAGAGGGAGTGGT 60.891 57.143 0.00 0.00 0.00 4.16
6332 7265 0.818296 CGTAGGAACAGAGGGAGTGG 59.182 60.000 0.00 0.00 0.00 4.00
6333 7266 1.202582 CACGTAGGAACAGAGGGAGTG 59.797 57.143 0.00 0.00 0.00 3.51
6334 7267 1.203025 ACACGTAGGAACAGAGGGAGT 60.203 52.381 0.00 0.00 0.00 3.85
6335 7268 1.546961 ACACGTAGGAACAGAGGGAG 58.453 55.000 0.00 0.00 0.00 4.30
6336 7269 2.005370 AACACGTAGGAACAGAGGGA 57.995 50.000 0.00 0.00 0.00 4.20
6337 7270 2.833631 AAACACGTAGGAACAGAGGG 57.166 50.000 0.00 0.00 0.00 4.30
6338 7271 4.684703 CACTAAAACACGTAGGAACAGAGG 59.315 45.833 0.00 0.00 0.00 3.69
6339 7272 5.175126 CACACTAAAACACGTAGGAACAGAG 59.825 44.000 0.00 0.00 0.00 3.35
6340 7273 5.045215 CACACTAAAACACGTAGGAACAGA 58.955 41.667 0.00 0.00 0.00 3.41
6341 7274 4.807304 ACACACTAAAACACGTAGGAACAG 59.193 41.667 0.00 0.00 0.00 3.16
6342 7275 4.757594 ACACACTAAAACACGTAGGAACA 58.242 39.130 0.00 0.00 0.00 3.18
6343 7276 6.421801 ACATACACACTAAAACACGTAGGAAC 59.578 38.462 0.00 0.00 0.00 3.62
6344 7277 6.514947 ACATACACACTAAAACACGTAGGAA 58.485 36.000 0.00 0.00 0.00 3.36
6345 7278 6.088016 ACATACACACTAAAACACGTAGGA 57.912 37.500 0.00 0.00 0.00 2.94
6346 7279 6.421501 TGAACATACACACTAAAACACGTAGG 59.578 38.462 0.00 0.00 0.00 3.18
6347 7280 7.397512 TGAACATACACACTAAAACACGTAG 57.602 36.000 0.00 0.00 0.00 3.51
6348 7281 7.652507 TGATGAACATACACACTAAAACACGTA 59.347 33.333 0.00 0.00 0.00 3.57
6349 7282 6.480651 TGATGAACATACACACTAAAACACGT 59.519 34.615 0.00 0.00 0.00 4.49
6350 7283 6.883129 TGATGAACATACACACTAAAACACG 58.117 36.000 0.00 0.00 0.00 4.49
6351 7284 9.677567 AATTGATGAACATACACACTAAAACAC 57.322 29.630 0.00 0.00 0.00 3.32
6355 7288 9.689976 CCAAAATTGATGAACATACACACTAAA 57.310 29.630 0.00 0.00 0.00 1.85
6356 7289 8.855110 ACCAAAATTGATGAACATACACACTAA 58.145 29.630 0.00 0.00 0.00 2.24
6357 7290 8.402798 ACCAAAATTGATGAACATACACACTA 57.597 30.769 0.00 0.00 0.00 2.74
6358 7291 7.288810 ACCAAAATTGATGAACATACACACT 57.711 32.000 0.00 0.00 0.00 3.55
6359 7292 6.586082 GGACCAAAATTGATGAACATACACAC 59.414 38.462 0.00 0.00 0.00 3.82
6360 7293 6.569418 CGGACCAAAATTGATGAACATACACA 60.569 38.462 0.00 0.00 0.00 3.72
6361 7294 5.799936 CGGACCAAAATTGATGAACATACAC 59.200 40.000 0.00 0.00 0.00 2.90
6362 7295 5.475220 ACGGACCAAAATTGATGAACATACA 59.525 36.000 0.00 0.00 0.00 2.29
6363 7296 5.949735 ACGGACCAAAATTGATGAACATAC 58.050 37.500 0.00 0.00 0.00 2.39
6364 7297 7.873719 ATACGGACCAAAATTGATGAACATA 57.126 32.000 0.00 0.00 0.00 2.29
6365 7298 6.773976 ATACGGACCAAAATTGATGAACAT 57.226 33.333 0.00 0.00 0.00 2.71
6366 7299 6.582677 AATACGGACCAAAATTGATGAACA 57.417 33.333 0.00 0.00 0.00 3.18
6367 7300 8.241367 ACTAAATACGGACCAAAATTGATGAAC 58.759 33.333 0.00 0.00 0.00 3.18
6368 7301 8.343168 ACTAAATACGGACCAAAATTGATGAA 57.657 30.769 0.00 0.00 0.00 2.57
6369 7302 7.066525 GGACTAAATACGGACCAAAATTGATGA 59.933 37.037 0.00 0.00 0.00 2.92
6370 7303 7.148154 TGGACTAAATACGGACCAAAATTGATG 60.148 37.037 0.00 0.00 0.00 3.07
6371 7304 6.887545 TGGACTAAATACGGACCAAAATTGAT 59.112 34.615 0.00 0.00 0.00 2.57
6372 7305 6.149807 GTGGACTAAATACGGACCAAAATTGA 59.850 38.462 0.00 0.00 0.00 2.57
6373 7306 6.072397 TGTGGACTAAATACGGACCAAAATTG 60.072 38.462 0.00 0.00 0.00 2.32
6374 7307 6.005198 TGTGGACTAAATACGGACCAAAATT 58.995 36.000 0.00 0.00 0.00 1.82
6375 7308 5.562635 TGTGGACTAAATACGGACCAAAAT 58.437 37.500 0.00 0.00 0.00 1.82
6376 7309 4.970711 TGTGGACTAAATACGGACCAAAA 58.029 39.130 0.00 0.00 0.00 2.44
6377 7310 4.620589 TGTGGACTAAATACGGACCAAA 57.379 40.909 0.00 0.00 0.00 3.28
6378 7311 4.829872 ATGTGGACTAAATACGGACCAA 57.170 40.909 0.00 0.00 0.00 3.67
6379 7312 4.829872 AATGTGGACTAAATACGGACCA 57.170 40.909 0.00 0.00 0.00 4.02
6380 7313 6.505044 AAAAATGTGGACTAAATACGGACC 57.495 37.500 0.00 0.00 0.00 4.46
6429 7362 8.964476 AGACGATGTAACTATCATTTCCAATT 57.036 30.769 0.00 0.00 0.00 2.32
6440 7373 9.796180 ACCTCTTCTTATAGACGATGTAACTAT 57.204 33.333 0.00 0.00 0.00 2.12
6442 7375 9.054922 GTACCTCTTCTTATAGACGATGTAACT 57.945 37.037 0.00 0.00 30.09 2.24
6443 7376 8.834465 TGTACCTCTTCTTATAGACGATGTAAC 58.166 37.037 0.00 0.00 30.09 2.50
6444 7377 8.969260 TGTACCTCTTCTTATAGACGATGTAA 57.031 34.615 0.00 0.00 30.09 2.41
6445 7378 8.969260 TTGTACCTCTTCTTATAGACGATGTA 57.031 34.615 0.00 0.00 27.94 2.29
6446 7379 7.876936 TTGTACCTCTTCTTATAGACGATGT 57.123 36.000 0.00 0.00 29.55 3.06
6458 7391 8.371699 GCCTATGAAGAATATTGTACCTCTTCT 58.628 37.037 11.83 6.06 42.74 2.85
6459 7392 8.371699 AGCCTATGAAGAATATTGTACCTCTTC 58.628 37.037 0.00 0.00 42.66 2.87
6460 7393 8.268878 AGCCTATGAAGAATATTGTACCTCTT 57.731 34.615 0.00 0.00 0.00 2.85
6461 7394 7.038658 GGAGCCTATGAAGAATATTGTACCTCT 60.039 40.741 0.00 0.00 0.00 3.69
6462 7395 7.038658 AGGAGCCTATGAAGAATATTGTACCTC 60.039 40.741 0.00 0.00 0.00 3.85
6463 7396 6.789959 AGGAGCCTATGAAGAATATTGTACCT 59.210 38.462 0.00 0.00 0.00 3.08
6464 7397 7.010339 AGGAGCCTATGAAGAATATTGTACC 57.990 40.000 0.00 0.00 0.00 3.34
6465 7398 7.671302 TGAGGAGCCTATGAAGAATATTGTAC 58.329 38.462 0.00 0.00 0.00 2.90
6466 7399 7.855784 TGAGGAGCCTATGAAGAATATTGTA 57.144 36.000 0.00 0.00 0.00 2.41
6467 7400 6.753913 TGAGGAGCCTATGAAGAATATTGT 57.246 37.500 0.00 0.00 0.00 2.71
6468 7401 7.040823 GGTTTGAGGAGCCTATGAAGAATATTG 60.041 40.741 0.00 0.00 0.00 1.90
6469 7402 7.001073 GGTTTGAGGAGCCTATGAAGAATATT 58.999 38.462 0.00 0.00 0.00 1.28
6470 7403 6.101734 TGGTTTGAGGAGCCTATGAAGAATAT 59.898 38.462 0.00 0.00 0.00 1.28
6471 7404 5.428457 TGGTTTGAGGAGCCTATGAAGAATA 59.572 40.000 0.00 0.00 0.00 1.75
6472 7405 4.228210 TGGTTTGAGGAGCCTATGAAGAAT 59.772 41.667 0.00 0.00 0.00 2.40
6473 7406 3.587061 TGGTTTGAGGAGCCTATGAAGAA 59.413 43.478 0.00 0.00 0.00 2.52
6474 7407 3.181329 TGGTTTGAGGAGCCTATGAAGA 58.819 45.455 0.00 0.00 0.00 2.87
6475 7408 3.634397 TGGTTTGAGGAGCCTATGAAG 57.366 47.619 0.00 0.00 0.00 3.02
6476 7409 4.228210 AGATTGGTTTGAGGAGCCTATGAA 59.772 41.667 0.00 0.00 0.00 2.57
6477 7410 3.782523 AGATTGGTTTGAGGAGCCTATGA 59.217 43.478 0.00 0.00 0.00 2.15
6478 7411 4.133078 GAGATTGGTTTGAGGAGCCTATG 58.867 47.826 0.00 0.00 0.00 2.23
6479 7412 4.043596 AGAGATTGGTTTGAGGAGCCTAT 58.956 43.478 0.00 0.00 0.00 2.57
6480 7413 3.454858 AGAGATTGGTTTGAGGAGCCTA 58.545 45.455 0.00 0.00 0.00 3.93
6481 7414 2.273619 AGAGATTGGTTTGAGGAGCCT 58.726 47.619 0.00 0.00 0.00 4.58
6482 7415 2.797177 AGAGATTGGTTTGAGGAGCC 57.203 50.000 0.00 0.00 0.00 4.70
6483 7416 4.479786 ACTAGAGATTGGTTTGAGGAGC 57.520 45.455 0.00 0.00 0.00 4.70
6484 7417 6.936279 TGTAACTAGAGATTGGTTTGAGGAG 58.064 40.000 0.00 0.00 32.25 3.69
6485 7418 6.724441 TCTGTAACTAGAGATTGGTTTGAGGA 59.276 38.462 0.00 0.00 32.25 3.71
6486 7419 6.936279 TCTGTAACTAGAGATTGGTTTGAGG 58.064 40.000 0.00 0.00 32.25 3.86
6487 7420 7.064016 GCTTCTGTAACTAGAGATTGGTTTGAG 59.936 40.741 0.00 0.00 32.25 3.02
6488 7421 6.874134 GCTTCTGTAACTAGAGATTGGTTTGA 59.126 38.462 0.00 0.00 32.25 2.69
6489 7422 6.876257 AGCTTCTGTAACTAGAGATTGGTTTG 59.124 38.462 0.00 0.00 32.25 2.93
6490 7423 7.010339 AGCTTCTGTAACTAGAGATTGGTTT 57.990 36.000 0.00 0.00 32.25 3.27
6491 7424 6.613153 AGCTTCTGTAACTAGAGATTGGTT 57.387 37.500 0.00 0.00 34.56 3.67
6492 7425 6.613153 AAGCTTCTGTAACTAGAGATTGGT 57.387 37.500 0.00 0.00 0.00 3.67
6493 7426 7.625185 GCAAAAGCTTCTGTAACTAGAGATTGG 60.625 40.741 0.00 0.00 0.00 3.16
6494 7427 7.118971 AGCAAAAGCTTCTGTAACTAGAGATTG 59.881 37.037 0.00 0.00 0.00 2.67
6495 7428 7.164803 AGCAAAAGCTTCTGTAACTAGAGATT 58.835 34.615 0.00 0.00 0.00 2.40
6496 7429 6.706295 AGCAAAAGCTTCTGTAACTAGAGAT 58.294 36.000 0.00 0.00 0.00 2.75
6497 7430 6.102897 AGCAAAAGCTTCTGTAACTAGAGA 57.897 37.500 0.00 0.00 0.00 3.10
6498 7431 6.035542 GCTAGCAAAAGCTTCTGTAACTAGAG 59.964 42.308 10.63 0.00 39.50 2.43
6499 7432 5.869888 GCTAGCAAAAGCTTCTGTAACTAGA 59.130 40.000 10.63 0.00 39.50 2.43
6500 7433 5.064071 GGCTAGCAAAAGCTTCTGTAACTAG 59.936 44.000 18.24 4.09 42.37 2.57
6501 7434 4.935808 GGCTAGCAAAAGCTTCTGTAACTA 59.064 41.667 18.24 0.00 42.37 2.24
6502 7435 3.753797 GGCTAGCAAAAGCTTCTGTAACT 59.246 43.478 18.24 0.00 42.37 2.24
6503 7436 3.753797 AGGCTAGCAAAAGCTTCTGTAAC 59.246 43.478 18.24 0.00 42.37 2.50
6504 7437 4.021102 AGGCTAGCAAAAGCTTCTGTAA 57.979 40.909 18.24 0.00 42.37 2.41
6505 7438 3.703001 AGGCTAGCAAAAGCTTCTGTA 57.297 42.857 18.24 0.00 42.37 2.74
6506 7439 2.575805 AGGCTAGCAAAAGCTTCTGT 57.424 45.000 18.24 0.00 42.37 3.41
6519 7452 3.129871 GCTCATGAACTTGCTAGGCTAG 58.870 50.000 17.33 17.33 37.42 3.42
6520 7453 2.501316 TGCTCATGAACTTGCTAGGCTA 59.499 45.455 0.00 0.00 0.00 3.93
6521 7454 1.280133 TGCTCATGAACTTGCTAGGCT 59.720 47.619 0.00 0.00 0.00 4.58
6522 7455 1.742761 TGCTCATGAACTTGCTAGGC 58.257 50.000 0.00 0.00 0.00 3.93
6523 7456 2.421424 GGTTGCTCATGAACTTGCTAGG 59.579 50.000 0.00 0.00 0.00 3.02
6524 7457 3.341823 AGGTTGCTCATGAACTTGCTAG 58.658 45.455 0.00 0.00 0.00 3.42
6525 7458 3.423539 AGGTTGCTCATGAACTTGCTA 57.576 42.857 0.00 0.00 0.00 3.49
6526 7459 2.283145 AGGTTGCTCATGAACTTGCT 57.717 45.000 0.00 0.00 0.00 3.91
6527 7460 4.708726 ATAAGGTTGCTCATGAACTTGC 57.291 40.909 0.00 0.00 0.00 4.01
6528 7461 6.094603 AGCTAATAAGGTTGCTCATGAACTTG 59.905 38.462 0.00 0.00 0.00 3.16
6529 7462 6.183347 AGCTAATAAGGTTGCTCATGAACTT 58.817 36.000 0.00 0.00 0.00 2.66
6530 7463 5.749462 AGCTAATAAGGTTGCTCATGAACT 58.251 37.500 0.00 0.00 0.00 3.01
6531 7464 6.017852 GGTAGCTAATAAGGTTGCTCATGAAC 60.018 42.308 0.00 0.00 37.02 3.18
6532 7465 6.055588 GGTAGCTAATAAGGTTGCTCATGAA 58.944 40.000 0.00 0.00 37.02 2.57
6533 7466 5.454755 GGGTAGCTAATAAGGTTGCTCATGA 60.455 44.000 0.00 0.00 37.02 3.07
6534 7467 4.757149 GGGTAGCTAATAAGGTTGCTCATG 59.243 45.833 0.00 0.00 37.02 3.07
6535 7468 4.660771 AGGGTAGCTAATAAGGTTGCTCAT 59.339 41.667 0.00 0.00 37.02 2.90
6536 7469 4.037927 AGGGTAGCTAATAAGGTTGCTCA 58.962 43.478 0.00 0.00 37.02 4.26
6537 7470 4.691326 AGGGTAGCTAATAAGGTTGCTC 57.309 45.455 0.00 0.00 37.02 4.26
6538 7471 6.765355 AATAGGGTAGCTAATAAGGTTGCT 57.235 37.500 0.00 0.00 39.30 3.91
6566 7499 9.734620 CAATTTTCTGTTGACTAGATTTGAACA 57.265 29.630 0.00 0.00 0.00 3.18
6567 7500 8.694394 GCAATTTTCTGTTGACTAGATTTGAAC 58.306 33.333 0.00 0.00 0.00 3.18
6568 7501 8.412456 TGCAATTTTCTGTTGACTAGATTTGAA 58.588 29.630 0.00 0.00 0.00 2.69
6569 7502 7.939782 TGCAATTTTCTGTTGACTAGATTTGA 58.060 30.769 0.00 0.00 0.00 2.69
6570 7503 8.644619 CATGCAATTTTCTGTTGACTAGATTTG 58.355 33.333 0.00 0.00 0.00 2.32
6571 7504 7.330208 GCATGCAATTTTCTGTTGACTAGATTT 59.670 33.333 14.21 0.00 0.00 2.17
6572 7505 6.810182 GCATGCAATTTTCTGTTGACTAGATT 59.190 34.615 14.21 0.00 0.00 2.40
6573 7506 6.327934 GCATGCAATTTTCTGTTGACTAGAT 58.672 36.000 14.21 0.00 0.00 1.98
6574 7507 5.335897 GGCATGCAATTTTCTGTTGACTAGA 60.336 40.000 21.36 0.00 0.00 2.43
6575 7508 4.860907 GGCATGCAATTTTCTGTTGACTAG 59.139 41.667 21.36 0.00 0.00 2.57
6576 7509 4.280425 TGGCATGCAATTTTCTGTTGACTA 59.720 37.500 21.36 0.00 0.00 2.59
6577 7510 3.069872 TGGCATGCAATTTTCTGTTGACT 59.930 39.130 21.36 0.00 0.00 3.41
6578 7511 3.391965 TGGCATGCAATTTTCTGTTGAC 58.608 40.909 21.36 0.00 0.00 3.18
6579 7512 3.747854 TGGCATGCAATTTTCTGTTGA 57.252 38.095 21.36 0.00 0.00 3.18
6580 7513 3.997681 TCATGGCATGCAATTTTCTGTTG 59.002 39.130 22.56 0.34 0.00 3.33
6581 7514 4.274602 TCATGGCATGCAATTTTCTGTT 57.725 36.364 22.56 0.00 0.00 3.16
6582 7515 3.965379 TCATGGCATGCAATTTTCTGT 57.035 38.095 22.56 0.00 0.00 3.41
6583 7516 4.250464 ACTTCATGGCATGCAATTTTCTG 58.750 39.130 22.56 2.81 0.00 3.02
6584 7517 4.546829 ACTTCATGGCATGCAATTTTCT 57.453 36.364 22.56 0.00 0.00 2.52
6585 7518 4.269363 GCTACTTCATGGCATGCAATTTTC 59.731 41.667 22.56 0.64 34.21 2.29
6586 7519 4.186159 GCTACTTCATGGCATGCAATTTT 58.814 39.130 22.56 5.94 34.21 1.82
6587 7520 3.196039 TGCTACTTCATGGCATGCAATTT 59.804 39.130 22.56 7.27 40.40 1.82
6588 7521 2.761767 TGCTACTTCATGGCATGCAATT 59.238 40.909 22.56 13.31 40.40 2.32
6589 7522 2.380941 TGCTACTTCATGGCATGCAAT 58.619 42.857 22.56 11.73 40.40 3.56
6590 7523 1.836802 TGCTACTTCATGGCATGCAA 58.163 45.000 22.56 9.21 40.40 4.08
6591 7524 1.836802 TTGCTACTTCATGGCATGCA 58.163 45.000 22.56 12.93 45.37 3.96
6592 7525 2.288030 GGATTGCTACTTCATGGCATGC 60.288 50.000 22.56 9.90 45.37 4.06
6593 7526 3.220110 AGGATTGCTACTTCATGGCATG 58.780 45.455 21.42 21.42 45.37 4.06
6594 7527 3.484407 GAGGATTGCTACTTCATGGCAT 58.516 45.455 0.00 0.00 45.37 4.40
6595 7528 2.742856 CGAGGATTGCTACTTCATGGCA 60.743 50.000 0.00 0.00 44.21 4.92
6596 7529 1.869767 CGAGGATTGCTACTTCATGGC 59.130 52.381 0.00 0.00 34.76 4.40
6597 7530 3.459232 TCGAGGATTGCTACTTCATGG 57.541 47.619 0.00 0.00 0.00 3.66
6598 7531 7.516481 CAATATTCGAGGATTGCTACTTCATG 58.484 38.462 8.03 0.00 0.00 3.07
6599 7532 7.664082 CAATATTCGAGGATTGCTACTTCAT 57.336 36.000 8.03 0.00 0.00 2.57
6608 7541 1.197721 GGCGGCAATATTCGAGGATTG 59.802 52.381 3.07 14.05 36.35 2.67
6609 7542 1.523758 GGCGGCAATATTCGAGGATT 58.476 50.000 3.07 0.00 0.00 3.01
6610 7543 0.670546 CGGCGGCAATATTCGAGGAT 60.671 55.000 10.53 0.00 0.00 3.24
6611 7544 1.300620 CGGCGGCAATATTCGAGGA 60.301 57.895 10.53 0.00 0.00 3.71
6612 7545 2.954753 GCGGCGGCAATATTCGAGG 61.955 63.158 9.78 0.00 39.62 4.63
6613 7546 2.551270 GCGGCGGCAATATTCGAG 59.449 61.111 9.78 0.00 39.62 4.04
6628 7561 3.864686 CAATCGGCGGGAGTTGCG 61.865 66.667 7.21 0.00 0.00 4.85
6629 7562 2.746277 ACAATCGGCGGGAGTTGC 60.746 61.111 7.21 0.00 0.00 4.17
6630 7563 2.106683 GGACAATCGGCGGGAGTTG 61.107 63.158 7.21 10.07 0.00 3.16
6631 7564 2.267961 GGACAATCGGCGGGAGTT 59.732 61.111 7.21 0.00 0.00 3.01
6632 7565 3.782443 GGGACAATCGGCGGGAGT 61.782 66.667 7.21 2.46 0.00 3.85
6633 7566 3.447025 GAGGGACAATCGGCGGGAG 62.447 68.421 7.21 0.00 0.00 4.30
6634 7567 3.467226 GAGGGACAATCGGCGGGA 61.467 66.667 7.21 0.00 0.00 5.14
6635 7568 2.608970 AATGAGGGACAATCGGCGGG 62.609 60.000 7.21 0.00 0.00 6.13
6636 7569 1.153168 AATGAGGGACAATCGGCGG 60.153 57.895 7.21 0.00 0.00 6.13
6637 7570 0.179073 AGAATGAGGGACAATCGGCG 60.179 55.000 0.00 0.00 34.00 6.46
6638 7571 1.943340 GAAGAATGAGGGACAATCGGC 59.057 52.381 0.00 0.00 34.00 5.54
6639 7572 3.266510 TGAAGAATGAGGGACAATCGG 57.733 47.619 0.00 0.00 34.00 4.18
6640 7573 4.637534 ACAATGAAGAATGAGGGACAATCG 59.362 41.667 0.00 0.00 34.00 3.34
6641 7574 5.416952 ACACAATGAAGAATGAGGGACAATC 59.583 40.000 0.00 0.00 0.00 2.67
6642 7575 5.327732 ACACAATGAAGAATGAGGGACAAT 58.672 37.500 0.00 0.00 0.00 2.71
6643 7576 4.728772 ACACAATGAAGAATGAGGGACAA 58.271 39.130 0.00 0.00 0.00 3.18
6644 7577 4.202451 TGACACAATGAAGAATGAGGGACA 60.202 41.667 0.00 0.00 0.00 4.02
6645 7578 4.326826 TGACACAATGAAGAATGAGGGAC 58.673 43.478 0.00 0.00 0.00 4.46
6646 7579 4.639078 TGACACAATGAAGAATGAGGGA 57.361 40.909 0.00 0.00 0.00 4.20
6647 7580 5.416639 TCATTGACACAATGAAGAATGAGGG 59.583 40.000 20.07 0.00 34.07 4.30
6648 7581 6.150641 AGTCATTGACACAATGAAGAATGAGG 59.849 38.462 22.74 0.00 38.27 3.86
6649 7582 7.142306 AGTCATTGACACAATGAAGAATGAG 57.858 36.000 22.74 0.00 38.27 2.90
6650 7583 7.308770 GGAAGTCATTGACACAATGAAGAATGA 60.309 37.037 22.74 5.53 38.27 2.57
6651 7584 6.805271 GGAAGTCATTGACACAATGAAGAATG 59.195 38.462 22.74 3.57 38.27 2.67
6652 7585 6.491062 TGGAAGTCATTGACACAATGAAGAAT 59.509 34.615 22.74 12.61 38.27 2.40
6653 7586 5.827267 TGGAAGTCATTGACACAATGAAGAA 59.173 36.000 22.74 9.33 38.27 2.52
6654 7587 5.375773 TGGAAGTCATTGACACAATGAAGA 58.624 37.500 22.74 4.95 38.27 2.87
6655 7588 5.694231 TGGAAGTCATTGACACAATGAAG 57.306 39.130 22.74 2.39 38.27 3.02
6656 7589 7.943079 ATATGGAAGTCATTGACACAATGAA 57.057 32.000 22.74 11.62 38.27 2.57
6657 7590 7.943079 AATATGGAAGTCATTGACACAATGA 57.057 32.000 18.57 18.95 37.30 2.57
6658 7591 9.888878 GATAATATGGAAGTCATTGACACAATG 57.111 33.333 18.57 15.53 37.30 2.82
6659 7592 9.631257 TGATAATATGGAAGTCATTGACACAAT 57.369 29.630 18.57 12.62 37.30 2.71
6660 7593 9.112725 CTGATAATATGGAAGTCATTGACACAA 57.887 33.333 18.57 6.57 37.30 3.33
6661 7594 8.485392 TCTGATAATATGGAAGTCATTGACACA 58.515 33.333 18.57 13.81 37.30 3.72
6662 7595 8.893219 TCTGATAATATGGAAGTCATTGACAC 57.107 34.615 18.57 11.50 37.30 3.67
6663 7596 8.708378 ACTCTGATAATATGGAAGTCATTGACA 58.292 33.333 18.57 0.00 37.30 3.58
6664 7597 9.553064 AACTCTGATAATATGGAAGTCATTGAC 57.447 33.333 8.82 8.82 37.30 3.18
6681 7614 9.894783 GCAATCGTCTTACTATTAACTCTGATA 57.105 33.333 0.00 0.00 0.00 2.15
6682 7615 8.414003 TGCAATCGTCTTACTATTAACTCTGAT 58.586 33.333 0.00 0.00 0.00 2.90
6683 7616 7.768240 TGCAATCGTCTTACTATTAACTCTGA 58.232 34.615 0.00 0.00 0.00 3.27
6684 7617 7.987268 TGCAATCGTCTTACTATTAACTCTG 57.013 36.000 0.00 0.00 0.00 3.35
6685 7618 7.868415 GGATGCAATCGTCTTACTATTAACTCT 59.132 37.037 0.00 0.00 46.86 3.24
6686 7619 7.116519 GGGATGCAATCGTCTTACTATTAACTC 59.883 40.741 0.00 0.00 46.86 3.01
6687 7620 6.929606 GGGATGCAATCGTCTTACTATTAACT 59.070 38.462 0.00 0.00 46.86 2.24
6688 7621 6.704493 TGGGATGCAATCGTCTTACTATTAAC 59.296 38.462 0.00 0.00 46.86 2.01
6689 7622 6.822442 TGGGATGCAATCGTCTTACTATTAA 58.178 36.000 0.00 0.00 46.86 1.40
6690 7623 6.413783 TGGGATGCAATCGTCTTACTATTA 57.586 37.500 0.00 0.00 46.86 0.98
6691 7624 5.290493 TGGGATGCAATCGTCTTACTATT 57.710 39.130 0.00 0.00 46.86 1.73
6692 7625 4.955811 TGGGATGCAATCGTCTTACTAT 57.044 40.909 0.00 0.00 46.86 2.12
6693 7626 4.588951 AGATGGGATGCAATCGTCTTACTA 59.411 41.667 0.00 0.00 46.86 1.82
6694 7627 3.389329 AGATGGGATGCAATCGTCTTACT 59.611 43.478 0.00 0.00 46.86 2.24
6695 7628 3.733337 AGATGGGATGCAATCGTCTTAC 58.267 45.455 0.00 0.00 46.86 2.34
6696 7629 4.422073 AAGATGGGATGCAATCGTCTTA 57.578 40.909 15.53 0.00 46.86 2.10
6697 7630 3.287867 AAGATGGGATGCAATCGTCTT 57.712 42.857 12.86 12.86 46.86 3.01
6698 7631 3.287867 AAAGATGGGATGCAATCGTCT 57.712 42.857 0.00 0.00 46.86 4.18
6699 7632 5.455392 CATAAAAGATGGGATGCAATCGTC 58.545 41.667 0.00 0.00 46.86 4.20
6700 7633 4.261741 GCATAAAAGATGGGATGCAATCGT 60.262 41.667 0.00 0.00 46.86 3.73
6701 7634 4.232221 GCATAAAAGATGGGATGCAATCG 58.768 43.478 0.00 0.00 46.86 3.34
6706 7639 4.924305 TCTTGCATAAAAGATGGGATGC 57.076 40.909 0.00 0.00 44.00 3.91
6707 7640 9.820725 TTTAATTCTTGCATAAAAGATGGGATG 57.179 29.630 0.00 0.00 36.12 3.51
6708 7641 9.822185 GTTTAATTCTTGCATAAAAGATGGGAT 57.178 29.630 0.00 0.00 36.12 3.85
6709 7642 8.257306 GGTTTAATTCTTGCATAAAAGATGGGA 58.743 33.333 0.00 0.00 36.12 4.37
6710 7643 8.040132 TGGTTTAATTCTTGCATAAAAGATGGG 58.960 33.333 0.00 0.00 36.12 4.00
6711 7644 9.434420 TTGGTTTAATTCTTGCATAAAAGATGG 57.566 29.630 0.00 0.00 36.12 3.51
6714 7647 9.267084 GGTTTGGTTTAATTCTTGCATAAAAGA 57.733 29.630 0.00 0.00 34.36 2.52
6715 7648 9.271828 AGGTTTGGTTTAATTCTTGCATAAAAG 57.728 29.630 0.00 0.00 0.00 2.27
6718 7651 9.921637 CTTAGGTTTGGTTTAATTCTTGCATAA 57.078 29.630 0.00 0.00 0.00 1.90
6719 7652 9.303116 TCTTAGGTTTGGTTTAATTCTTGCATA 57.697 29.630 0.00 0.00 0.00 3.14
6720 7653 8.189119 TCTTAGGTTTGGTTTAATTCTTGCAT 57.811 30.769 0.00 0.00 0.00 3.96
6721 7654 7.589958 TCTTAGGTTTGGTTTAATTCTTGCA 57.410 32.000 0.00 0.00 0.00 4.08
6722 7655 6.586463 GCTCTTAGGTTTGGTTTAATTCTTGC 59.414 38.462 0.00 0.00 0.00 4.01
6723 7656 7.090808 GGCTCTTAGGTTTGGTTTAATTCTTG 58.909 38.462 0.00 0.00 0.00 3.02
6724 7657 6.780522 TGGCTCTTAGGTTTGGTTTAATTCTT 59.219 34.615 0.00 0.00 0.00 2.52
6725 7658 6.311735 TGGCTCTTAGGTTTGGTTTAATTCT 58.688 36.000 0.00 0.00 0.00 2.40
6726 7659 6.584185 TGGCTCTTAGGTTTGGTTTAATTC 57.416 37.500 0.00 0.00 0.00 2.17
6727 7660 6.127730 CGATGGCTCTTAGGTTTGGTTTAATT 60.128 38.462 0.00 0.00 0.00 1.40
6728 7661 5.357032 CGATGGCTCTTAGGTTTGGTTTAAT 59.643 40.000 0.00 0.00 0.00 1.40
6729 7662 4.698304 CGATGGCTCTTAGGTTTGGTTTAA 59.302 41.667 0.00 0.00 0.00 1.52
6730 7663 4.258543 CGATGGCTCTTAGGTTTGGTTTA 58.741 43.478 0.00 0.00 0.00 2.01
6731 7664 3.081804 CGATGGCTCTTAGGTTTGGTTT 58.918 45.455 0.00 0.00 0.00 3.27
6732 7665 2.711542 CGATGGCTCTTAGGTTTGGTT 58.288 47.619 0.00 0.00 0.00 3.67
6733 7666 1.679032 GCGATGGCTCTTAGGTTTGGT 60.679 52.381 0.00 0.00 35.83 3.67
6734 7667 1.017387 GCGATGGCTCTTAGGTTTGG 58.983 55.000 0.00 0.00 35.83 3.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.