Multiple sequence alignment - TraesCS5D01G164500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G164500 chr5D 100.000 3651 0 0 1 3651 255941762 255945412 0.000000e+00 6743.0
1 TraesCS5D01G164500 chr5D 100.000 3618 0 0 3853 7470 255945614 255949231 0.000000e+00 6682.0
2 TraesCS5D01G164500 chr5D 100.000 56 0 0 4449 4504 255946155 255946210 3.690000e-18 104.0
3 TraesCS5D01G164500 chr5D 100.000 56 0 0 4394 4449 255946210 255946265 3.690000e-18 104.0
4 TraesCS5D01G164500 chr5B 95.684 1784 60 6 1881 3651 289704449 289706228 0.000000e+00 2852.0
5 TraesCS5D01G164500 chr5B 95.065 993 31 6 4967 5942 289707228 289708219 0.000000e+00 1546.0
6 TraesCS5D01G164500 chr5B 91.459 843 50 11 5961 6789 289708204 289709038 0.000000e+00 1138.0
7 TraesCS5D01G164500 chr5B 96.482 597 18 3 3853 4449 289706266 289706859 0.000000e+00 983.0
8 TraesCS5D01G164500 chr5B 93.427 639 34 5 1312 1947 289703818 289704451 0.000000e+00 941.0
9 TraesCS5D01G164500 chr5B 97.897 428 7 1 4449 4876 289706804 289707229 0.000000e+00 739.0
10 TraesCS5D01G164500 chr5B 84.511 665 57 19 634 1272 289703174 289703818 3.830000e-172 616.0
11 TraesCS5D01G164500 chr5B 81.847 639 85 14 3 625 289702315 289702938 6.690000e-140 508.0
12 TraesCS5D01G164500 chr5B 95.794 214 9 0 6842 7055 289733040 289733253 5.550000e-91 346.0
13 TraesCS5D01G164500 chr5B 92.523 107 8 0 7178 7284 289733291 289733397 3.610000e-33 154.0
14 TraesCS5D01G164500 chr5B 92.453 106 4 2 4870 4971 625959457 625959562 1.680000e-31 148.0
15 TraesCS5D01G164500 chr5B 92.593 81 3 2 6776 6856 289732931 289733008 6.130000e-21 113.0
16 TraesCS5D01G164500 chr5B 76.056 142 17 9 621 747 386534661 386534800 2.910000e-04 58.4
17 TraesCS5D01G164500 chr5A 96.234 1673 53 3 1980 3651 340131890 340133553 0.000000e+00 2732.0
18 TraesCS5D01G164500 chr5A 94.366 994 30 9 4967 5942 340134554 340135539 0.000000e+00 1502.0
19 TraesCS5D01G164500 chr5A 92.757 994 35 12 5962 6926 340135524 340136509 0.000000e+00 1402.0
20 TraesCS5D01G164500 chr5A 95.928 614 19 6 3853 4462 340133589 340134200 0.000000e+00 990.0
21 TraesCS5D01G164500 chr5A 94.679 639 29 4 1312 1947 340130964 340131600 0.000000e+00 987.0
22 TraesCS5D01G164500 chr5A 98.131 428 8 0 4449 4876 340134128 340134555 0.000000e+00 747.0
23 TraesCS5D01G164500 chr5A 89.562 594 43 7 681 1272 340130388 340130964 0.000000e+00 736.0
24 TraesCS5D01G164500 chr5A 83.191 351 46 7 5029 5368 104613348 104613696 7.280000e-80 309.0
25 TraesCS5D01G164500 chr5A 97.980 99 2 0 6957 7055 340136508 340136606 9.960000e-39 172.0
26 TraesCS5D01G164500 chr5A 91.803 122 7 1 7178 7296 340136642 340136763 4.640000e-37 167.0
27 TraesCS5D01G164500 chr5A 92.035 113 8 1 1881 1992 340131598 340131710 2.790000e-34 158.0
28 TraesCS5D01G164500 chr5A 89.362 47 5 0 696 742 426350157 426350111 8.090000e-05 60.2
29 TraesCS5D01G164500 chr1D 88.451 762 63 17 5960 6707 8731839 8732589 0.000000e+00 896.0
30 TraesCS5D01G164500 chr1D 93.602 422 27 0 4449 4870 8730960 8731381 1.370000e-176 630.0
31 TraesCS5D01G164500 chr1D 88.170 448 29 12 5496 5942 8731432 8731856 5.170000e-141 512.0
32 TraesCS5D01G164500 chr1D 87.085 271 21 8 6680 6941 8732595 8732860 2.040000e-75 294.0
33 TraesCS5D01G164500 chr1D 88.312 154 18 0 7317 7470 140047990 140047837 1.280000e-42 185.0
34 TraesCS5D01G164500 chr6A 87.815 238 25 4 5023 5256 616204290 616204527 7.380000e-70 276.0
35 TraesCS5D01G164500 chr7D 90.476 168 16 0 7303 7470 548904810 548904643 9.760000e-54 222.0
36 TraesCS5D01G164500 chr7D 89.080 174 19 0 7297 7470 104506059 104506232 4.540000e-52 217.0
37 TraesCS5D01G164500 chr7D 88.312 154 18 0 7317 7470 336163767 336163920 1.280000e-42 185.0
38 TraesCS5D01G164500 chr7D 89.908 109 8 1 4865 4970 384144471 384144579 3.640000e-28 137.0
39 TraesCS5D01G164500 chr7D 93.182 44 2 1 1273 1316 3731664 3731622 6.260000e-06 63.9
40 TraesCS5D01G164500 chrUn 89.610 154 16 0 7317 7470 229259273 229259120 5.910000e-46 196.0
41 TraesCS5D01G164500 chrUn 100.000 34 0 0 1272 1305 27363087 27363120 6.260000e-06 63.9
42 TraesCS5D01G164500 chr6B 88.961 154 17 0 7317 7470 617453643 617453490 2.750000e-44 191.0
43 TraesCS5D01G164500 chr7A 88.312 154 18 0 7317 7470 367001467 367001314 1.280000e-42 185.0
44 TraesCS5D01G164500 chr7A 93.182 44 2 1 1273 1316 2554597 2554555 6.260000e-06 63.9
45 TraesCS5D01G164500 chr7A 93.182 44 2 1 1273 1316 2851682 2851640 6.260000e-06 63.9
46 TraesCS5D01G164500 chr3B 88.312 154 18 0 7317 7470 163699401 163699248 1.280000e-42 185.0
47 TraesCS5D01G164500 chr3B 88.312 154 18 0 7317 7470 462658926 462659079 1.280000e-42 185.0
48 TraesCS5D01G164500 chr3B 86.719 128 11 3 4845 4969 479298502 479298378 3.640000e-28 137.0
49 TraesCS5D01G164500 chr4D 94.175 103 3 1 4872 4971 265367329 265367227 3.610000e-33 154.0
50 TraesCS5D01G164500 chr3A 91.743 109 6 2 4867 4973 447274971 447274864 1.680000e-31 148.0
51 TraesCS5D01G164500 chr3A 90.826 109 7 2 4867 4973 408947005 408946898 7.810000e-30 143.0
52 TraesCS5D01G164500 chr2A 91.589 107 5 2 4866 4968 377135508 377135614 2.170000e-30 145.0
53 TraesCS5D01G164500 chr2A 90.000 110 7 2 4867 4973 27741361 27741253 1.010000e-28 139.0
54 TraesCS5D01G164500 chr2D 90.090 111 6 3 4861 4968 67559219 67559327 1.010000e-28 139.0
55 TraesCS5D01G164500 chr2D 94.595 37 2 0 1271 1307 197846552 197846516 2.910000e-04 58.4
56 TraesCS5D01G164500 chr2B 87.654 81 10 0 3463 3543 723400081 723400001 2.220000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G164500 chr5D 255941762 255949231 7469 False 3408.250 6743 100.0000 1 7470 4 chr5D.!!$F1 7469
1 TraesCS5D01G164500 chr5B 289702315 289709038 6723 False 1165.375 2852 92.0465 3 6789 8 chr5B.!!$F3 6786
2 TraesCS5D01G164500 chr5A 340130388 340136763 6375 False 959.300 2732 94.3475 681 7296 10 chr5A.!!$F2 6615
3 TraesCS5D01G164500 chr1D 8730960 8732860 1900 False 583.000 896 89.3270 4449 6941 4 chr1D.!!$F1 2492

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
152 155 0.102120 CACAACGTGCAACCACCATT 59.898 50.0 0.00 0.0 38.79 3.16 F
1285 1564 0.107456 ATTACAGATGCAGAGGCCGG 59.893 55.0 0.00 0.0 40.13 6.13 F
1841 2123 0.385974 CTACAAGCGTTGCCAAGTGC 60.386 55.0 0.00 0.0 41.77 4.40 F
3534 4084 2.080286 ACTACTGGTTCGTGCATGAC 57.920 50.0 8.48 4.1 0.00 3.06 F
4890 5444 0.115745 AACTACTCCCTCCGTCCCAA 59.884 55.0 0.00 0.0 0.00 4.12 F
4891 5445 0.115745 ACTACTCCCTCCGTCCCAAA 59.884 55.0 0.00 0.0 0.00 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1681 1963 0.981183 ACCCCATTGCGACTTCACTA 59.019 50.0 0.00 0.00 0.00 2.74 R
2287 2829 1.346365 GTCGTCTCGCAACAATAGCA 58.654 50.0 0.00 0.00 0.00 3.49 R
3604 4155 0.602905 ACGTGGAAAGAAAGAGGGCG 60.603 55.0 0.00 0.00 0.00 6.13 R
5308 5864 0.388649 AGTGGAATGCTCGTGTCGTC 60.389 55.0 0.00 0.00 0.00 4.20 R
6123 6708 0.723981 CCTCTTAGCGAGCAGTTTGC 59.276 55.0 0.00 0.00 45.46 3.68 R
6673 7268 1.246649 ATTGACTGCATGCACCGAAA 58.753 45.0 18.46 9.43 0.00 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 0.321671 CACCCCTTGTCGATCACACT 59.678 55.000 0.00 0.00 33.41 3.55
32 33 2.159043 CGATCACACTACCAAGAGGCAT 60.159 50.000 0.00 0.00 39.06 4.40
41 42 1.271926 ACCAAGAGGCATAACCACCAC 60.272 52.381 0.00 0.00 43.14 4.16
44 45 0.328258 AGAGGCATAACCACCACCAC 59.672 55.000 0.00 0.00 43.14 4.16
45 46 0.328258 GAGGCATAACCACCACCACT 59.672 55.000 0.00 0.00 43.14 4.00
51 52 2.346284 TAACCACCACCACTGCCACC 62.346 60.000 0.00 0.00 0.00 4.61
71 72 2.574399 GAAGCCCGTCGAAGAGCT 59.426 61.111 0.68 0.68 37.15 4.09
76 77 2.507992 CCGTCGAAGAGCTGCCTG 60.508 66.667 0.00 0.00 36.95 4.85
113 116 2.280389 CCGTCCCTGCATCCGATG 60.280 66.667 3.82 3.82 0.00 3.84
116 119 1.592669 GTCCCTGCATCCGATGTCG 60.593 63.158 10.10 0.00 39.44 4.35
124 127 1.539065 GCATCCGATGTCGAACCTCAT 60.539 52.381 10.10 0.00 43.02 2.90
130 133 2.031069 CGATGTCGAACCTCATACCGAT 60.031 50.000 0.00 0.00 43.02 4.18
151 154 1.732917 CACAACGTGCAACCACCAT 59.267 52.632 0.00 0.00 38.79 3.55
152 155 0.102120 CACAACGTGCAACCACCATT 59.898 50.000 0.00 0.00 38.79 3.16
154 157 1.606668 ACAACGTGCAACCACCATTAG 59.393 47.619 0.00 0.00 38.79 1.73
156 159 0.250727 ACGTGCAACCACCATTAGCT 60.251 50.000 0.00 0.00 38.79 3.32
178 181 2.348998 CGGGAAGCAAGCACCTCT 59.651 61.111 7.87 0.00 0.00 3.69
184 187 4.785453 GCAAGCACCTCTCCCCCG 62.785 72.222 0.00 0.00 0.00 5.73
203 206 4.016706 CCCACGAGACCCCACCAC 62.017 72.222 0.00 0.00 0.00 4.16
204 207 3.238497 CCACGAGACCCCACCACA 61.238 66.667 0.00 0.00 0.00 4.17
222 226 2.755655 CACACCGGTAGAACAGAGAGAT 59.244 50.000 6.87 0.00 0.00 2.75
226 230 3.215151 CCGGTAGAACAGAGAGATGCTA 58.785 50.000 0.00 0.00 0.00 3.49
230 234 5.047188 GGTAGAACAGAGAGATGCTAAAGC 58.953 45.833 0.00 0.00 42.50 3.51
236 240 2.886782 GAGATGCTAAAGCCGGCGC 61.887 63.158 23.20 19.20 41.18 6.53
295 299 4.728102 CTACGTGCCGCCGACCAA 62.728 66.667 0.00 0.00 0.00 3.67
298 302 4.728102 CGTGCCGCCGACCAACTA 62.728 66.667 0.00 0.00 0.00 2.24
305 309 1.005867 GCCGACCAACTACCGACAA 60.006 57.895 0.00 0.00 0.00 3.18
332 336 3.234730 GAGGGGGCATCGACCGAT 61.235 66.667 0.00 0.00 34.81 4.18
347 351 1.774254 ACCGATGCCCCATCAGATTTA 59.226 47.619 6.09 0.00 40.54 1.40
355 359 3.217626 CCCCATCAGATTTAGCAACTCC 58.782 50.000 0.00 0.00 0.00 3.85
363 367 5.188555 TCAGATTTAGCAACTCCAGATCTGT 59.811 40.000 21.11 3.57 39.76 3.41
372 376 0.691078 TCCAGATCTGTACAGGGGGC 60.691 60.000 22.48 9.56 0.00 5.80
373 377 1.700042 CCAGATCTGTACAGGGGGCC 61.700 65.000 22.48 0.00 0.00 5.80
400 404 3.996124 CCCTGATAGCCTCGGCCG 61.996 72.222 22.12 22.12 43.17 6.13
420 424 3.842923 CCAGCCATCGTCGCCTCT 61.843 66.667 0.00 0.00 0.00 3.69
421 425 2.490148 CCAGCCATCGTCGCCTCTA 61.490 63.158 0.00 0.00 0.00 2.43
429 433 2.711922 CGTCGCCTCTAGCACCCTT 61.712 63.158 0.00 0.00 44.04 3.95
434 438 1.269831 CGCCTCTAGCACCCTTATGAC 60.270 57.143 0.00 0.00 44.04 3.06
451 456 3.266376 CGCGTCAACCACCAACGT 61.266 61.111 0.00 0.00 38.60 3.99
464 476 2.029073 AACGTCACCAGTCGCCAG 59.971 61.111 0.00 0.00 0.00 4.85
467 479 2.740055 GTCACCAGTCGCCAGCTG 60.740 66.667 6.78 6.78 0.00 4.24
472 484 2.740055 CAGTCGCCAGCTGGTCAC 60.740 66.667 32.81 26.90 37.57 3.67
479 491 2.046988 CAGCTGGTCACCATCGCA 60.047 61.111 10.55 0.00 30.82 5.10
481 493 1.073025 AGCTGGTCACCATCGCAAA 59.927 52.632 10.55 0.00 30.82 3.68
484 496 0.798776 CTGGTCACCATCGCAAAGAC 59.201 55.000 0.00 0.00 30.82 3.01
485 497 0.396435 TGGTCACCATCGCAAAGACT 59.604 50.000 0.00 0.00 0.00 3.24
495 507 4.389576 CAAAGACTGCACGCCCGC 62.390 66.667 0.00 0.00 0.00 6.13
496 508 4.626081 AAAGACTGCACGCCCGCT 62.626 61.111 0.00 0.00 0.00 5.52
511 526 4.052518 GCTGGGCATCCACCACCT 62.053 66.667 0.00 0.00 38.32 4.00
519 534 1.463214 ATCCACCACCTGTCCACCA 60.463 57.895 0.00 0.00 0.00 4.17
520 535 1.065410 ATCCACCACCTGTCCACCAA 61.065 55.000 0.00 0.00 0.00 3.67
521 536 1.065410 TCCACCACCTGTCCACCAAT 61.065 55.000 0.00 0.00 0.00 3.16
531 546 3.381136 CCACCAATGCCCCAACCG 61.381 66.667 0.00 0.00 0.00 4.44
576 592 2.597340 CCATTGGACGGGAGCCAT 59.403 61.111 0.00 0.00 36.27 4.40
577 593 1.526917 CCATTGGACGGGAGCCATC 60.527 63.158 0.00 0.00 36.27 3.51
585 601 1.348008 ACGGGAGCCATCACCATCAT 61.348 55.000 0.00 0.00 0.00 2.45
587 603 0.475475 GGGAGCCATCACCATCATGA 59.525 55.000 0.00 0.00 0.00 3.07
588 604 1.075050 GGGAGCCATCACCATCATGAT 59.925 52.381 1.18 1.18 40.03 2.45
600 617 0.632835 ATCATGATGCCAACCCCACT 59.367 50.000 7.59 0.00 0.00 4.00
609 626 1.533753 CAACCCCACTGGCCAACAT 60.534 57.895 7.01 0.00 37.83 2.71
610 627 1.228862 AACCCCACTGGCCAACATC 60.229 57.895 7.01 0.00 37.83 3.06
625 642 1.428869 ACATCCCATGTAGAGAGGCC 58.571 55.000 0.00 0.00 42.78 5.19
626 643 1.061812 ACATCCCATGTAGAGAGGCCT 60.062 52.381 3.86 3.86 42.78 5.19
628 645 0.636647 TCCCATGTAGAGAGGCCTCA 59.363 55.000 33.90 14.77 41.87 3.86
630 647 0.755686 CCATGTAGAGAGGCCTCACC 59.244 60.000 33.90 23.82 41.87 4.02
631 648 0.387202 CATGTAGAGAGGCCTCACCG 59.613 60.000 33.90 13.51 46.52 4.94
682 941 3.905678 CCCTCTAGCGGCGGTGAG 61.906 72.222 23.33 22.86 0.00 3.51
730 989 4.144703 GTTCCTCCCCGTCGCCTC 62.145 72.222 0.00 0.00 0.00 4.70
790 1049 9.429359 CATAATAATCCTCGCTCTTGAGTAATT 57.571 33.333 0.00 0.00 34.04 1.40
793 1052 6.472686 AATCCTCGCTCTTGAGTAATTAGT 57.527 37.500 0.00 0.00 34.04 2.24
794 1053 7.584122 AATCCTCGCTCTTGAGTAATTAGTA 57.416 36.000 0.00 0.00 34.04 1.82
795 1054 7.584122 ATCCTCGCTCTTGAGTAATTAGTAA 57.416 36.000 0.00 0.00 34.04 2.24
796 1055 7.584122 TCCTCGCTCTTGAGTAATTAGTAAT 57.416 36.000 0.00 0.00 34.04 1.89
797 1056 8.687292 TCCTCGCTCTTGAGTAATTAGTAATA 57.313 34.615 0.00 0.00 34.04 0.98
798 1057 9.298250 TCCTCGCTCTTGAGTAATTAGTAATAT 57.702 33.333 0.00 0.00 34.04 1.28
799 1058 9.915629 CCTCGCTCTTGAGTAATTAGTAATATT 57.084 33.333 0.00 0.00 34.04 1.28
836 1111 7.390718 ACAAATATATAAGACGCTCATTTCCCC 59.609 37.037 0.00 0.00 0.00 4.81
932 1211 2.235898 CTCCCTCTCCCTTCTCACAAAG 59.764 54.545 0.00 0.00 0.00 2.77
933 1212 1.981495 CCCTCTCCCTTCTCACAAAGT 59.019 52.381 0.00 0.00 0.00 2.66
934 1213 2.027653 CCCTCTCCCTTCTCACAAAGTC 60.028 54.545 0.00 0.00 0.00 3.01
935 1214 2.634940 CCTCTCCCTTCTCACAAAGTCA 59.365 50.000 0.00 0.00 0.00 3.41
936 1215 3.556004 CCTCTCCCTTCTCACAAAGTCAC 60.556 52.174 0.00 0.00 0.00 3.67
937 1216 3.038280 TCTCCCTTCTCACAAAGTCACA 58.962 45.455 0.00 0.00 0.00 3.58
938 1217 3.454447 TCTCCCTTCTCACAAAGTCACAA 59.546 43.478 0.00 0.00 0.00 3.33
939 1218 4.080582 TCTCCCTTCTCACAAAGTCACAAA 60.081 41.667 0.00 0.00 0.00 2.83
955 1234 6.389906 AGTCACAAACAAACTTTGGAAGAAG 58.610 36.000 6.47 0.00 33.92 2.85
965 1244 0.681733 TTGGAAGAAGAGCTCAGCGT 59.318 50.000 17.77 5.19 0.00 5.07
1082 1361 0.318441 CAACGACTCAGCCTTCCTCA 59.682 55.000 0.00 0.00 0.00 3.86
1127 1406 2.970974 GCGTCTTGGAGCAGCAACC 61.971 63.158 0.00 0.00 0.00 3.77
1141 1420 1.676967 CAACCAGAGGAAGCAGCCC 60.677 63.158 0.00 0.00 0.00 5.19
1170 1449 3.815396 GCTGGCCAAGGTTAGCGC 61.815 66.667 7.01 0.00 0.00 5.92
1219 1498 1.134995 TCTCTAACGACGAGGCGACTA 60.135 52.381 4.95 0.00 44.43 2.59
1271 1550 7.098074 TGCATATGATTGTTCTGCAATTACA 57.902 32.000 6.97 0.00 46.90 2.41
1272 1551 7.197703 TGCATATGATTGTTCTGCAATTACAG 58.802 34.615 6.97 0.00 46.90 2.74
1273 1552 7.067251 TGCATATGATTGTTCTGCAATTACAGA 59.933 33.333 6.97 4.15 46.90 3.41
1274 1553 8.080417 GCATATGATTGTTCTGCAATTACAGAT 58.920 33.333 9.20 0.00 46.90 2.90
1275 1554 9.394477 CATATGATTGTTCTGCAATTACAGATG 57.606 33.333 9.20 0.00 46.90 2.90
1276 1555 5.643664 TGATTGTTCTGCAATTACAGATGC 58.356 37.500 9.20 6.53 46.90 3.91
1282 1561 2.019249 TGCAATTACAGATGCAGAGGC 58.981 47.619 0.00 0.00 46.87 4.70
1283 1562 1.336125 GCAATTACAGATGCAGAGGCC 59.664 52.381 0.00 0.00 42.12 5.19
1284 1563 1.600957 CAATTACAGATGCAGAGGCCG 59.399 52.381 0.00 0.00 40.13 6.13
1285 1564 0.107456 ATTACAGATGCAGAGGCCGG 59.893 55.000 0.00 0.00 40.13 6.13
1286 1565 1.971505 TTACAGATGCAGAGGCCGGG 61.972 60.000 2.18 0.00 40.13 5.73
1287 1566 4.559063 CAGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
1289 1568 4.554036 GATGCAGAGGCCGGGGTC 62.554 72.222 2.18 0.00 40.13 4.46
1292 1571 4.554036 GCAGAGGCCGGGGTCATC 62.554 72.222 2.18 0.00 0.00 2.92
1293 1572 3.866582 CAGAGGCCGGGGTCATCC 61.867 72.222 2.18 0.00 0.00 3.51
1304 1583 3.970205 GGTCATCCCCTTTCCGAAA 57.030 52.632 0.00 0.00 0.00 3.46
1305 1584 2.209690 GGTCATCCCCTTTCCGAAAA 57.790 50.000 0.00 0.00 0.00 2.29
1306 1585 2.521126 GGTCATCCCCTTTCCGAAAAA 58.479 47.619 0.00 0.00 0.00 1.94
1307 1586 2.492088 GGTCATCCCCTTTCCGAAAAAG 59.508 50.000 0.00 3.94 0.00 2.27
1308 1587 3.418047 GTCATCCCCTTTCCGAAAAAGA 58.582 45.455 10.67 0.00 0.00 2.52
1309 1588 3.824443 GTCATCCCCTTTCCGAAAAAGAA 59.176 43.478 10.67 0.00 0.00 2.52
1310 1589 4.279922 GTCATCCCCTTTCCGAAAAAGAAA 59.720 41.667 10.67 0.00 0.00 2.52
1355 1634 7.686938 CGGATAACTGTGTTTCGACTAAAATTC 59.313 37.037 0.00 0.00 0.00 2.17
1386 1668 3.367910 GCCCCGCATGTTTAAAATCTTCA 60.368 43.478 0.00 0.00 0.00 3.02
1392 1674 8.783093 CCCGCATGTTTAAAATCTTCAGATATA 58.217 33.333 0.00 0.00 33.73 0.86
1551 1833 5.885912 TCTGCAGTCCTAATTTTGTTATCCC 59.114 40.000 14.67 0.00 0.00 3.85
1677 1959 7.048512 ACTGCTAAGGTGATAGATAACCAAAC 58.951 38.462 0.00 0.00 39.05 2.93
1681 1963 5.888982 AGGTGATAGATAACCAAACGGAT 57.111 39.130 0.00 0.00 39.05 4.18
1699 1981 2.213499 GATAGTGAAGTCGCAATGGGG 58.787 52.381 0.00 0.00 0.00 4.96
1803 2085 1.433534 GTTTTCAGAGAGGAGTGGCG 58.566 55.000 0.00 0.00 0.00 5.69
1841 2123 0.385974 CTACAAGCGTTGCCAAGTGC 60.386 55.000 0.00 0.00 41.77 4.40
1976 2324 6.593770 TGCAAGAGCGAAAATAGTCTTTATGA 59.406 34.615 0.00 0.00 46.23 2.15
2007 2548 6.341316 TCAACTATGAGCCAACTATGTTCTC 58.659 40.000 0.00 0.00 0.00 2.87
2024 2565 9.961265 CTATGTTCTCATTTGATTTATGCATGT 57.039 29.630 10.16 0.00 35.70 3.21
2042 2583 4.746611 GCATGTATCCTTGCCAATTTAAGC 59.253 41.667 0.00 0.00 36.12 3.09
2143 2685 8.436778 ACATAATGATATTGTTAGGTAGGTGCA 58.563 33.333 0.00 0.00 0.00 4.57
2164 2706 5.181748 GCACCATAGTCAATCAAGAGAAGT 58.818 41.667 0.00 0.00 0.00 3.01
2166 2708 5.064452 CACCATAGTCAATCAAGAGAAGTGC 59.936 44.000 0.00 0.00 0.00 4.40
2168 2710 5.879223 CCATAGTCAATCAAGAGAAGTGCTT 59.121 40.000 0.00 0.00 0.00 3.91
2287 2829 6.786461 TCAGAGAGAATCCCACTGATATCAAT 59.214 38.462 6.90 0.00 36.15 2.57
2404 2946 7.980099 CGAGATGGTAACTTTCTACCTTAACAT 59.020 37.037 1.76 0.00 41.78 2.71
2716 3266 4.363138 TCTATCGAGAATGTGTGTCATGC 58.637 43.478 0.00 0.00 36.81 4.06
2770 3320 5.972935 TGAACTGTGTCTACTTCACTTCAA 58.027 37.500 0.00 0.00 36.83 2.69
2819 3369 9.775854 CATCATGGTCTTATCTTTCTTATCTGT 57.224 33.333 0.00 0.00 0.00 3.41
3001 3551 4.724399 TGCCTGTGACAAGATAAAAGGAA 58.276 39.130 0.00 0.00 0.00 3.36
3069 3619 4.065281 GCCTGGGCTGCTGCAAAG 62.065 66.667 17.89 12.91 41.91 2.77
3186 3736 9.448438 CATATATATACTTGCCAACCAAAGCTA 57.552 33.333 0.00 0.00 31.94 3.32
3307 3857 4.600012 TTTATGCTTGAAAGTAGCGAGC 57.400 40.909 0.00 0.00 41.54 5.03
3326 3876 5.446875 GCGAGCCAGTAAGTAATAAAACACC 60.447 44.000 0.00 0.00 0.00 4.16
3534 4084 2.080286 ACTACTGGTTCGTGCATGAC 57.920 50.000 8.48 4.10 0.00 3.06
3566 4116 5.385198 TGGTATCAAAGCCAAGAAGTCTTT 58.615 37.500 0.00 0.00 33.11 2.52
3573 4123 4.907879 AGCCAAGAAGTCTTTGTTTCAG 57.092 40.909 0.00 0.00 33.11 3.02
4126 4677 5.989551 TTTCCAAGAAAATTTGCTTCAGC 57.010 34.783 8.57 0.00 42.50 4.26
4199 4750 4.680237 CACGGCAGGGACGAAGCA 62.680 66.667 0.00 0.00 35.20 3.91
4202 4753 2.347490 GGCAGGGACGAAGCAAGA 59.653 61.111 0.00 0.00 0.00 3.02
4425 4976 9.988350 ATTTGTATTAGTCGCATTCTACTTTTG 57.012 29.630 0.00 0.00 0.00 2.44
4426 4977 7.534085 TGTATTAGTCGCATTCTACTTTTGG 57.466 36.000 0.00 0.00 0.00 3.28
4427 4978 7.101054 TGTATTAGTCGCATTCTACTTTTGGT 58.899 34.615 0.00 0.00 0.00 3.67
4428 4979 6.663944 ATTAGTCGCATTCTACTTTTGGTC 57.336 37.500 0.00 0.00 0.00 4.02
4429 4980 4.002906 AGTCGCATTCTACTTTTGGTCA 57.997 40.909 0.00 0.00 0.00 4.02
4430 4981 3.746492 AGTCGCATTCTACTTTTGGTCAC 59.254 43.478 0.00 0.00 0.00 3.67
4431 4982 3.496884 GTCGCATTCTACTTTTGGTCACA 59.503 43.478 0.00 0.00 0.00 3.58
4432 4983 4.154195 GTCGCATTCTACTTTTGGTCACAT 59.846 41.667 0.00 0.00 0.00 3.21
4433 4984 5.350365 GTCGCATTCTACTTTTGGTCACATA 59.650 40.000 0.00 0.00 0.00 2.29
4434 4985 6.037172 GTCGCATTCTACTTTTGGTCACATAT 59.963 38.462 0.00 0.00 0.00 1.78
4435 4986 6.597672 TCGCATTCTACTTTTGGTCACATATT 59.402 34.615 0.00 0.00 0.00 1.28
4436 4987 7.766738 TCGCATTCTACTTTTGGTCACATATTA 59.233 33.333 0.00 0.00 0.00 0.98
4437 4988 8.064222 CGCATTCTACTTTTGGTCACATATTAG 58.936 37.037 0.00 0.00 0.00 1.73
4438 4989 9.109393 GCATTCTACTTTTGGTCACATATTAGA 57.891 33.333 0.00 0.00 0.00 2.10
4443 4994 9.722056 CTACTTTTGGTCACATATTAGATTTGC 57.278 33.333 0.00 0.00 0.00 3.68
4444 4995 7.547227 ACTTTTGGTCACATATTAGATTTGCC 58.453 34.615 0.00 0.00 0.00 4.52
4445 4996 5.749596 TTGGTCACATATTAGATTTGCCG 57.250 39.130 0.00 0.00 0.00 5.69
4446 4997 4.133820 TGGTCACATATTAGATTTGCCGG 58.866 43.478 0.00 0.00 0.00 6.13
4447 4998 4.141597 TGGTCACATATTAGATTTGCCGGA 60.142 41.667 5.05 0.00 0.00 5.14
4448 4999 5.003804 GGTCACATATTAGATTTGCCGGAT 58.996 41.667 5.05 0.00 0.00 4.18
4449 5000 5.473504 GGTCACATATTAGATTTGCCGGATT 59.526 40.000 5.05 0.00 0.00 3.01
4450 5001 6.348540 GGTCACATATTAGATTTGCCGGATTC 60.349 42.308 5.05 0.00 0.00 2.52
4451 5002 6.428159 GTCACATATTAGATTTGCCGGATTCT 59.572 38.462 5.05 3.15 0.00 2.40
4452 5003 7.602644 GTCACATATTAGATTTGCCGGATTCTA 59.397 37.037 5.05 2.06 0.00 2.10
4453 5004 8.154203 TCACATATTAGATTTGCCGGATTCTAA 58.846 33.333 5.05 11.60 35.72 2.10
4454 5005 8.783093 CACATATTAGATTTGCCGGATTCTAAA 58.217 33.333 5.05 0.00 35.11 1.85
4455 5006 9.520515 ACATATTAGATTTGCCGGATTCTAAAT 57.479 29.630 5.05 3.12 35.11 1.40
4835 5386 2.771562 TCTCTCCAGGAGATGAGCAT 57.228 50.000 20.22 0.00 45.20 3.79
4884 5438 3.959573 CGTAAGTAACTACTCCCTCCG 57.040 52.381 0.00 0.00 34.99 4.63
4885 5439 3.274288 CGTAAGTAACTACTCCCTCCGT 58.726 50.000 0.00 0.00 34.99 4.69
4886 5440 3.311048 CGTAAGTAACTACTCCCTCCGTC 59.689 52.174 0.00 0.00 34.99 4.79
4887 5441 2.433662 AGTAACTACTCCCTCCGTCC 57.566 55.000 0.00 0.00 0.00 4.79
4888 5442 1.064091 AGTAACTACTCCCTCCGTCCC 60.064 57.143 0.00 0.00 0.00 4.46
4889 5443 1.002069 TAACTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
4890 5444 0.115745 AACTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
4891 5445 0.115745 ACTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
4892 5446 1.272807 CTACTCCCTCCGTCCCAAAA 58.727 55.000 0.00 0.00 0.00 2.44
4893 5447 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
4894 5448 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
4895 5449 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
4896 5450 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
4897 5451 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
4898 5452 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
4899 5453 2.026636 CCCTCCGTCCCAAAATAAGTGA 60.027 50.000 0.00 0.00 0.00 3.41
4900 5454 3.007635 CCTCCGTCCCAAAATAAGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
4901 5455 3.307480 CCTCCGTCCCAAAATAAGTGACT 60.307 47.826 0.00 0.00 0.00 3.41
4902 5456 3.933332 CTCCGTCCCAAAATAAGTGACTC 59.067 47.826 0.00 0.00 0.00 3.36
4903 5457 3.325425 TCCGTCCCAAAATAAGTGACTCA 59.675 43.478 0.00 0.00 0.00 3.41
4904 5458 4.069304 CCGTCCCAAAATAAGTGACTCAA 58.931 43.478 0.00 0.00 0.00 3.02
4905 5459 4.154195 CCGTCCCAAAATAAGTGACTCAAG 59.846 45.833 0.00 0.00 0.00 3.02
4906 5460 4.755123 CGTCCCAAAATAAGTGACTCAAGT 59.245 41.667 0.00 0.00 0.00 3.16
4907 5461 5.238650 CGTCCCAAAATAAGTGACTCAAGTT 59.761 40.000 0.00 0.00 0.00 2.66
4908 5462 6.238648 CGTCCCAAAATAAGTGACTCAAGTTT 60.239 38.462 0.00 0.00 0.00 2.66
4909 5463 6.918022 GTCCCAAAATAAGTGACTCAAGTTTG 59.082 38.462 11.50 11.50 0.00 2.93
4910 5464 6.605594 TCCCAAAATAAGTGACTCAAGTTTGT 59.394 34.615 15.07 0.00 0.00 2.83
4911 5465 7.776030 TCCCAAAATAAGTGACTCAAGTTTGTA 59.224 33.333 15.07 5.29 0.00 2.41
4912 5466 7.860872 CCCAAAATAAGTGACTCAAGTTTGTAC 59.139 37.037 15.07 0.00 0.00 2.90
4913 5467 8.621286 CCAAAATAAGTGACTCAAGTTTGTACT 58.379 33.333 15.07 0.00 35.68 2.73
4919 5473 8.788325 AAGTGACTCAAGTTTGTACTAACTTT 57.212 30.769 26.14 15.97 43.85 2.66
4920 5474 8.197988 AGTGACTCAAGTTTGTACTAACTTTG 57.802 34.615 26.14 22.84 43.85 2.77
4921 5475 6.905609 GTGACTCAAGTTTGTACTAACTTTGC 59.094 38.462 26.14 17.51 43.85 3.68
4922 5476 6.596106 TGACTCAAGTTTGTACTAACTTTGCA 59.404 34.615 26.14 19.22 43.85 4.08
4923 5477 6.782150 ACTCAAGTTTGTACTAACTTTGCAC 58.218 36.000 26.14 0.00 43.85 4.57
4924 5478 6.598064 ACTCAAGTTTGTACTAACTTTGCACT 59.402 34.615 26.14 8.03 43.85 4.40
4925 5479 7.767198 ACTCAAGTTTGTACTAACTTTGCACTA 59.233 33.333 26.14 11.32 43.85 2.74
4926 5480 8.495361 TCAAGTTTGTACTAACTTTGCACTAA 57.505 30.769 26.14 8.83 43.85 2.24
4927 5481 8.948145 TCAAGTTTGTACTAACTTTGCACTAAA 58.052 29.630 26.14 8.13 43.85 1.85
4928 5482 9.006215 CAAGTTTGTACTAACTTTGCACTAAAC 57.994 33.333 26.14 9.75 43.85 2.01
4929 5483 8.502105 AGTTTGTACTAACTTTGCACTAAACT 57.498 30.769 15.68 5.33 34.81 2.66
4930 5484 8.953313 AGTTTGTACTAACTTTGCACTAAACTT 58.047 29.630 15.68 0.00 34.81 2.66
4933 5487 9.603921 TTGTACTAACTTTGCACTAAACTTAGT 57.396 29.630 0.00 0.00 44.42 2.24
4937 5491 9.603921 ACTAACTTTGCACTAAACTTAGTACAA 57.396 29.630 10.06 10.06 42.33 2.41
4942 5496 8.726870 TTTGCACTAAACTTAGTACAAAGAGT 57.273 30.769 18.00 0.00 45.22 3.24
4943 5497 7.941795 TGCACTAAACTTAGTACAAAGAGTC 57.058 36.000 1.87 0.00 41.82 3.36
4944 5498 7.494211 TGCACTAAACTTAGTACAAAGAGTCA 58.506 34.615 1.87 0.00 41.82 3.41
4945 5499 7.437267 TGCACTAAACTTAGTACAAAGAGTCAC 59.563 37.037 1.87 0.00 41.82 3.67
4946 5500 7.652507 GCACTAAACTTAGTACAAAGAGTCACT 59.347 37.037 1.87 0.00 41.82 3.41
4947 5501 9.530633 CACTAAACTTAGTACAAAGAGTCACTT 57.469 33.333 1.87 0.00 41.82 3.16
4955 5509 7.745620 AGTACAAAGAGTCACTTATTTTGGG 57.254 36.000 12.34 0.00 37.93 4.12
4956 5510 7.514721 AGTACAAAGAGTCACTTATTTTGGGA 58.485 34.615 12.34 1.67 37.93 4.37
4957 5511 8.164070 AGTACAAAGAGTCACTTATTTTGGGAT 58.836 33.333 12.34 0.00 37.93 3.85
4958 5512 7.219484 ACAAAGAGTCACTTATTTTGGGATG 57.781 36.000 12.34 0.00 37.93 3.51
4959 5513 6.209391 ACAAAGAGTCACTTATTTTGGGATGG 59.791 38.462 12.34 0.00 37.93 3.51
4960 5514 5.779241 AGAGTCACTTATTTTGGGATGGA 57.221 39.130 0.00 0.00 0.00 3.41
4961 5515 5.749462 AGAGTCACTTATTTTGGGATGGAG 58.251 41.667 0.00 0.00 0.00 3.86
4962 5516 4.860022 AGTCACTTATTTTGGGATGGAGG 58.140 43.478 0.00 0.00 0.00 4.30
4963 5517 3.954258 GTCACTTATTTTGGGATGGAGGG 59.046 47.826 0.00 0.00 0.00 4.30
4964 5518 3.855599 TCACTTATTTTGGGATGGAGGGA 59.144 43.478 0.00 0.00 0.00 4.20
4965 5519 4.079787 TCACTTATTTTGGGATGGAGGGAG 60.080 45.833 0.00 0.00 0.00 4.30
4966 5520 3.858638 ACTTATTTTGGGATGGAGGGAGT 59.141 43.478 0.00 0.00 0.00 3.85
4967 5521 5.043762 ACTTATTTTGGGATGGAGGGAGTA 58.956 41.667 0.00 0.00 0.00 2.59
4974 5528 2.913617 GGGATGGAGGGAGTATTTAGGG 59.086 54.545 0.00 0.00 0.00 3.53
5061 5616 5.107104 GCAAAAGGCTTGCCTTTACATTAAC 60.107 40.000 31.85 16.44 38.84 2.01
5235 5791 4.319333 CGGTATCATGAAGCTCAAATGCTC 60.319 45.833 0.00 0.00 43.24 4.26
5238 5794 3.682696 TCATGAAGCTCAAATGCTCTGT 58.317 40.909 0.00 0.00 43.24 3.41
5278 5834 2.787994 CATGGCTCTTCCTTGAGTTGT 58.212 47.619 0.00 0.00 41.25 3.32
5308 5864 4.530857 GGGTCTCGACATGGCGGG 62.531 72.222 23.19 20.26 0.00 6.13
5422 5980 2.180276 GAGAGCCCACCACTCTTTAGA 58.820 52.381 0.00 0.00 44.50 2.10
5424 5982 1.903183 GAGCCCACCACTCTTTAGACT 59.097 52.381 0.00 0.00 0.00 3.24
5484 6055 1.299541 AGCGCCAACTTCCATATTCG 58.700 50.000 2.29 0.00 0.00 3.34
5531 6103 8.978874 TTTGTCCATGCAGTATAATATGTTCT 57.021 30.769 0.00 0.00 0.00 3.01
5621 6193 8.306761 GTTGATTGGAGTAGTCAATTGGAAATT 58.693 33.333 5.42 0.00 37.36 1.82
5684 6259 3.955650 TGCTCCACTGAACTACTTACC 57.044 47.619 0.00 0.00 0.00 2.85
5942 6517 8.090831 GCTTATCCAGAAAAAGACAAGGATTTT 58.909 33.333 0.00 0.00 37.14 1.82
5943 6518 9.987272 CTTATCCAGAAAAAGACAAGGATTTTT 57.013 29.630 0.00 0.00 40.37 1.94
5944 6519 9.762933 TTATCCAGAAAAAGACAAGGATTTTTG 57.237 29.630 0.00 0.00 38.40 2.44
5945 6520 6.048509 TCCAGAAAAAGACAAGGATTTTTGC 58.951 36.000 0.76 0.00 38.40 3.68
5946 6521 5.237127 CCAGAAAAAGACAAGGATTTTTGCC 59.763 40.000 0.76 0.00 38.40 4.52
5947 6522 5.049828 AGAAAAAGACAAGGATTTTTGCCG 58.950 37.500 0.76 0.00 38.40 5.69
5948 6523 4.664150 AAAAGACAAGGATTTTTGCCGA 57.336 36.364 0.00 0.00 0.00 5.54
5949 6524 4.664150 AAAGACAAGGATTTTTGCCGAA 57.336 36.364 0.00 0.00 0.00 4.30
5950 6525 4.664150 AAGACAAGGATTTTTGCCGAAA 57.336 36.364 0.00 0.00 0.00 3.46
5951 6526 4.664150 AGACAAGGATTTTTGCCGAAAA 57.336 36.364 0.00 0.00 41.20 2.29
5952 6527 5.017294 AGACAAGGATTTTTGCCGAAAAA 57.983 34.783 0.00 0.00 43.51 1.94
6121 6706 2.094700 TGTTACGTCTTGAGCTAGGCAG 60.095 50.000 0.00 0.00 0.00 4.85
6146 6731 0.900647 ACTGCTCGCTAAGAGGGTGT 60.901 55.000 0.00 0.00 46.91 4.16
6236 6821 6.824958 TTTACCCAGACCTGCTAATTAGAT 57.175 37.500 16.85 0.00 0.00 1.98
6243 6828 7.125507 CCCAGACCTGCTAATTAGATATCATCT 59.874 40.741 16.85 7.45 43.33 2.90
6358 6943 0.175989 GAAGGATGAGTGACCCGGTC 59.824 60.000 10.96 10.96 0.00 4.79
6367 6952 0.251916 GTGACCCGGTCATCATCCAA 59.748 55.000 23.14 0.00 44.63 3.53
6482 7067 4.278170 CAGAATTTTGAGCCTGTAACACCA 59.722 41.667 0.00 0.00 0.00 4.17
6485 7070 5.806654 ATTTTGAGCCTGTAACACCAATT 57.193 34.783 0.00 0.00 0.00 2.32
6486 7071 4.582701 TTTGAGCCTGTAACACCAATTG 57.417 40.909 0.00 0.00 0.00 2.32
6577 7172 7.397761 AGTTACAGCCTTACAGAGAGATAGTTT 59.602 37.037 0.00 0.00 0.00 2.66
6607 7202 3.763057 CCCTGTAGCAAGGTAAGGTTTT 58.237 45.455 0.00 0.00 35.34 2.43
6621 7216 6.884836 AGGTAAGGTTTTGCTAGAACTTATGG 59.115 38.462 0.00 0.00 0.00 2.74
6673 7268 4.898829 TGCGATACAAGCAATAGCAATT 57.101 36.364 0.00 0.00 45.49 2.32
6733 7361 4.283363 AGAGCAAGTGTGTCATCAGAAT 57.717 40.909 0.00 0.00 0.00 2.40
6861 7523 7.025365 CACTTGAAACCACATTATCTGACATG 58.975 38.462 0.00 0.00 0.00 3.21
6926 7588 3.007506 TCTTAGAATTGGTGGACGCTTGA 59.992 43.478 0.00 0.00 0.00 3.02
6935 7597 4.580868 TGGTGGACGCTTGATACAAATTA 58.419 39.130 0.00 0.00 0.00 1.40
6941 7603 8.231837 GTGGACGCTTGATACAAATTACTTTTA 58.768 33.333 0.00 0.00 0.00 1.52
6942 7604 8.231837 TGGACGCTTGATACAAATTACTTTTAC 58.768 33.333 0.00 0.00 0.00 2.01
6943 7605 8.231837 GGACGCTTGATACAAATTACTTTTACA 58.768 33.333 0.00 0.00 0.00 2.41
6944 7606 9.262472 GACGCTTGATACAAATTACTTTTACAG 57.738 33.333 0.00 0.00 0.00 2.74
6945 7607 8.780249 ACGCTTGATACAAATTACTTTTACAGT 58.220 29.630 0.00 0.00 39.87 3.55
6946 7608 9.607285 CGCTTGATACAAATTACTTTTACAGTT 57.393 29.630 0.00 0.00 36.88 3.16
6954 7616 9.965824 ACAAATTACTTTTACAGTTGGAATCTG 57.034 29.630 0.00 0.00 36.88 2.90
6996 7658 4.219070 ACATATGCATGCGAGCCAAATATT 59.781 37.500 14.09 0.00 35.39 1.28
7032 7694 0.333993 AGCAATGCCACCCAGATTCT 59.666 50.000 0.00 0.00 0.00 2.40
7055 7717 2.159627 GTGGGTTCGTTCACAGCAATAG 59.840 50.000 0.00 0.00 34.32 1.73
7057 7719 1.130561 GGTTCGTTCACAGCAATAGCC 59.869 52.381 0.00 0.00 43.56 3.93
7059 7721 2.401583 TCGTTCACAGCAATAGCCAT 57.598 45.000 0.00 0.00 43.56 4.40
7060 7722 2.009051 TCGTTCACAGCAATAGCCATG 58.991 47.619 0.00 0.00 43.56 3.66
7061 7723 2.009051 CGTTCACAGCAATAGCCATGA 58.991 47.619 0.00 0.00 43.56 3.07
7062 7724 2.223112 CGTTCACAGCAATAGCCATGAC 60.223 50.000 0.00 0.00 43.56 3.06
7066 7739 0.106569 CAGCAATAGCCATGACCCCA 60.107 55.000 0.00 0.00 43.56 4.96
7079 7752 4.202243 CCATGACCCCAAAATATGCGAAAT 60.202 41.667 0.00 0.00 0.00 2.17
7080 7753 5.010516 CCATGACCCCAAAATATGCGAAATA 59.989 40.000 0.00 0.00 0.00 1.40
7081 7754 5.508200 TGACCCCAAAATATGCGAAATAC 57.492 39.130 0.00 0.00 0.00 1.89
7082 7755 5.197451 TGACCCCAAAATATGCGAAATACT 58.803 37.500 0.00 0.00 0.00 2.12
7083 7756 5.654650 TGACCCCAAAATATGCGAAATACTT 59.345 36.000 0.00 0.00 0.00 2.24
7084 7757 6.144078 ACCCCAAAATATGCGAAATACTTC 57.856 37.500 0.00 0.00 0.00 3.01
7085 7758 5.068591 ACCCCAAAATATGCGAAATACTTCC 59.931 40.000 0.00 0.00 0.00 3.46
7086 7759 5.301805 CCCCAAAATATGCGAAATACTTCCT 59.698 40.000 0.00 0.00 0.00 3.36
7087 7760 6.438763 CCCAAAATATGCGAAATACTTCCTC 58.561 40.000 0.00 0.00 0.00 3.71
7088 7761 6.263168 CCCAAAATATGCGAAATACTTCCTCT 59.737 38.462 0.00 0.00 0.00 3.69
7089 7762 7.134815 CCAAAATATGCGAAATACTTCCTCTG 58.865 38.462 0.00 0.00 0.00 3.35
7090 7763 7.201732 CCAAAATATGCGAAATACTTCCTCTGT 60.202 37.037 0.00 0.00 0.00 3.41
7091 7764 8.826710 CAAAATATGCGAAATACTTCCTCTGTA 58.173 33.333 0.00 0.00 0.00 2.74
7092 7765 7.948278 AATATGCGAAATACTTCCTCTGTAC 57.052 36.000 0.00 0.00 0.00 2.90
7093 7766 5.599999 ATGCGAAATACTTCCTCTGTACT 57.400 39.130 0.00 0.00 0.00 2.73
7094 7767 4.744570 TGCGAAATACTTCCTCTGTACTG 58.255 43.478 0.00 0.00 0.00 2.74
7095 7768 4.219944 TGCGAAATACTTCCTCTGTACTGT 59.780 41.667 0.00 0.00 0.00 3.55
7096 7769 5.416639 TGCGAAATACTTCCTCTGTACTGTA 59.583 40.000 0.00 0.00 0.00 2.74
7097 7770 6.071784 TGCGAAATACTTCCTCTGTACTGTAA 60.072 38.462 0.00 0.00 0.00 2.41
7098 7771 6.979238 GCGAAATACTTCCTCTGTACTGTAAT 59.021 38.462 0.00 0.00 0.00 1.89
7099 7772 8.133627 GCGAAATACTTCCTCTGTACTGTAATA 58.866 37.037 0.00 0.00 0.00 0.98
7106 7779 7.974501 ACTTCCTCTGTACTGTAATATTTGTCG 59.025 37.037 0.00 0.00 0.00 4.35
7107 7780 6.270815 TCCTCTGTACTGTAATATTTGTCGC 58.729 40.000 0.00 0.00 0.00 5.19
7108 7781 6.096423 TCCTCTGTACTGTAATATTTGTCGCT 59.904 38.462 0.00 0.00 0.00 4.93
7109 7782 6.199154 CCTCTGTACTGTAATATTTGTCGCTG 59.801 42.308 0.00 0.00 0.00 5.18
7110 7783 6.040247 TCTGTACTGTAATATTTGTCGCTGG 58.960 40.000 0.00 0.00 0.00 4.85
7111 7784 5.968254 TGTACTGTAATATTTGTCGCTGGA 58.032 37.500 0.00 0.00 0.00 3.86
7112 7785 6.040247 TGTACTGTAATATTTGTCGCTGGAG 58.960 40.000 0.00 0.00 0.00 3.86
7113 7786 3.871594 ACTGTAATATTTGTCGCTGGAGC 59.128 43.478 0.00 0.00 37.78 4.70
7114 7787 3.867857 TGTAATATTTGTCGCTGGAGCA 58.132 40.909 0.00 0.00 42.21 4.26
7115 7788 3.871006 TGTAATATTTGTCGCTGGAGCAG 59.129 43.478 0.00 0.00 42.21 4.24
7165 7838 3.952535 GCTCCAGCAACAAATATTACGG 58.047 45.455 0.00 0.00 41.59 4.02
7166 7839 3.377172 GCTCCAGCAACAAATATTACGGT 59.623 43.478 0.00 0.00 41.59 4.83
7167 7840 4.573201 GCTCCAGCAACAAATATTACGGTA 59.427 41.667 0.00 0.00 41.59 4.02
7168 7841 5.503520 GCTCCAGCAACAAATATTACGGTAC 60.504 44.000 0.00 0.00 41.59 3.34
7169 7842 5.489249 TCCAGCAACAAATATTACGGTACA 58.511 37.500 0.00 0.00 0.00 2.90
7170 7843 5.583061 TCCAGCAACAAATATTACGGTACAG 59.417 40.000 0.00 0.00 0.00 2.74
7171 7844 5.583061 CCAGCAACAAATATTACGGTACAGA 59.417 40.000 0.00 0.00 0.00 3.41
7172 7845 6.238103 CCAGCAACAAATATTACGGTACAGAG 60.238 42.308 0.00 0.00 0.00 3.35
7173 7846 5.815740 AGCAACAAATATTACGGTACAGAGG 59.184 40.000 0.00 0.00 0.00 3.69
7174 7847 5.007332 GCAACAAATATTACGGTACAGAGGG 59.993 44.000 0.00 0.00 0.00 4.30
7175 7848 6.342906 CAACAAATATTACGGTACAGAGGGA 58.657 40.000 0.00 0.00 0.00 4.20
7176 7849 6.158023 ACAAATATTACGGTACAGAGGGAG 57.842 41.667 0.00 0.00 0.00 4.30
7213 7886 4.982295 GGTGACATTAAAGGCTGAAAACAC 59.018 41.667 0.00 0.00 0.00 3.32
7220 7893 2.584492 AGGCTGAAAACACAACTTGC 57.416 45.000 0.00 0.00 0.00 4.01
7225 7898 2.540931 CTGAAAACACAACTTGCCATGC 59.459 45.455 0.00 0.00 0.00 4.06
7284 7957 0.393537 GGGACATGGAGCTTGTGAGG 60.394 60.000 0.00 0.00 0.00 3.86
7285 7958 0.615331 GGACATGGAGCTTGTGAGGA 59.385 55.000 0.00 0.00 0.00 3.71
7286 7959 1.406614 GGACATGGAGCTTGTGAGGAG 60.407 57.143 0.00 0.00 0.00 3.69
7287 7960 1.277557 GACATGGAGCTTGTGAGGAGT 59.722 52.381 0.00 0.00 0.00 3.85
7288 7961 1.701847 ACATGGAGCTTGTGAGGAGTT 59.298 47.619 0.00 0.00 0.00 3.01
7289 7962 2.289945 ACATGGAGCTTGTGAGGAGTTC 60.290 50.000 0.00 0.00 0.00 3.01
7290 7963 1.423584 TGGAGCTTGTGAGGAGTTCA 58.576 50.000 0.00 0.00 0.00 3.18
7299 7972 2.936919 TGAGGAGTTCACATGCTGTT 57.063 45.000 0.00 0.00 0.00 3.16
7301 7974 3.664107 TGAGGAGTTCACATGCTGTTAC 58.336 45.455 0.00 0.00 0.00 2.50
7302 7975 2.668457 GAGGAGTTCACATGCTGTTACG 59.332 50.000 0.00 0.00 0.00 3.18
7303 7976 2.299013 AGGAGTTCACATGCTGTTACGA 59.701 45.455 0.00 0.00 0.00 3.43
7304 7977 2.412089 GGAGTTCACATGCTGTTACGAC 59.588 50.000 0.00 0.00 0.00 4.34
7305 7978 2.412089 GAGTTCACATGCTGTTACGACC 59.588 50.000 0.00 0.00 0.00 4.79
7306 7979 1.126113 GTTCACATGCTGTTACGACCG 59.874 52.381 0.00 0.00 0.00 4.79
7307 7980 0.389296 TCACATGCTGTTACGACCGG 60.389 55.000 0.00 0.00 0.00 5.28
7308 7981 1.740296 ACATGCTGTTACGACCGGC 60.740 57.895 0.00 0.00 0.00 6.13
7309 7982 1.739929 CATGCTGTTACGACCGGCA 60.740 57.895 0.00 9.05 37.70 5.69
7310 7983 1.089481 CATGCTGTTACGACCGGCAT 61.089 55.000 0.00 12.13 41.52 4.40
7311 7984 0.462375 ATGCTGTTACGACCGGCATA 59.538 50.000 15.01 0.00 40.15 3.14
7312 7985 0.462375 TGCTGTTACGACCGGCATAT 59.538 50.000 0.00 0.00 31.71 1.78
7313 7986 1.134640 TGCTGTTACGACCGGCATATT 60.135 47.619 0.00 0.00 31.71 1.28
7314 7987 2.101082 TGCTGTTACGACCGGCATATTA 59.899 45.455 0.00 0.00 31.71 0.98
7315 7988 2.729882 GCTGTTACGACCGGCATATTAG 59.270 50.000 0.00 0.00 0.00 1.73
7316 7989 3.314553 CTGTTACGACCGGCATATTAGG 58.685 50.000 0.00 0.00 0.00 2.69
7317 7990 2.694628 TGTTACGACCGGCATATTAGGT 59.305 45.455 0.00 0.00 41.63 3.08
7318 7991 3.054878 GTTACGACCGGCATATTAGGTG 58.945 50.000 0.00 0.00 38.57 4.00
7319 7992 0.391597 ACGACCGGCATATTAGGTGG 59.608 55.000 0.00 0.99 38.57 4.61
7320 7993 0.320421 CGACCGGCATATTAGGTGGG 60.320 60.000 0.00 0.00 38.57 4.61
7321 7994 0.763035 GACCGGCATATTAGGTGGGT 59.237 55.000 0.00 0.00 38.57 4.51
7322 7995 1.142262 GACCGGCATATTAGGTGGGTT 59.858 52.381 0.00 0.00 38.57 4.11
7323 7996 1.133915 ACCGGCATATTAGGTGGGTTG 60.134 52.381 0.00 0.00 36.81 3.77
7324 7997 1.133915 CCGGCATATTAGGTGGGTTGT 60.134 52.381 0.00 0.00 0.00 3.32
7325 7998 1.946768 CGGCATATTAGGTGGGTTGTG 59.053 52.381 0.00 0.00 0.00 3.33
7326 7999 2.306847 GGCATATTAGGTGGGTTGTGG 58.693 52.381 0.00 0.00 0.00 4.17
7327 8000 2.357777 GGCATATTAGGTGGGTTGTGGT 60.358 50.000 0.00 0.00 0.00 4.16
7328 8001 2.949644 GCATATTAGGTGGGTTGTGGTC 59.050 50.000 0.00 0.00 0.00 4.02
7329 8002 3.551846 CATATTAGGTGGGTTGTGGTCC 58.448 50.000 0.00 0.00 0.00 4.46
7330 8003 1.451449 ATTAGGTGGGTTGTGGTCCA 58.549 50.000 0.00 0.00 0.00 4.02
7331 8004 1.223501 TTAGGTGGGTTGTGGTCCAA 58.776 50.000 0.00 0.00 34.47 3.53
7332 8005 1.223501 TAGGTGGGTTGTGGTCCAAA 58.776 50.000 0.00 0.00 34.07 3.28
7333 8006 0.560688 AGGTGGGTTGTGGTCCAAAT 59.439 50.000 0.00 0.00 34.07 2.32
7334 8007 1.062505 AGGTGGGTTGTGGTCCAAATT 60.063 47.619 0.00 0.00 34.07 1.82
7335 8008 2.178106 AGGTGGGTTGTGGTCCAAATTA 59.822 45.455 0.00 0.00 34.07 1.40
7336 8009 3.169908 GGTGGGTTGTGGTCCAAATTAT 58.830 45.455 0.00 0.00 34.07 1.28
7337 8010 3.580895 GGTGGGTTGTGGTCCAAATTATT 59.419 43.478 0.00 0.00 34.07 1.40
7338 8011 4.041075 GGTGGGTTGTGGTCCAAATTATTT 59.959 41.667 0.00 0.00 34.07 1.40
7339 8012 5.455469 GGTGGGTTGTGGTCCAAATTATTTT 60.455 40.000 0.00 0.00 34.07 1.82
7340 8013 6.239629 GGTGGGTTGTGGTCCAAATTATTTTA 60.240 38.462 0.00 0.00 34.07 1.52
7341 8014 7.390823 GTGGGTTGTGGTCCAAATTATTTTAT 58.609 34.615 0.00 0.00 34.07 1.40
7342 8015 7.880713 GTGGGTTGTGGTCCAAATTATTTTATT 59.119 33.333 0.00 0.00 34.07 1.40
7343 8016 7.880195 TGGGTTGTGGTCCAAATTATTTTATTG 59.120 33.333 0.00 0.00 34.07 1.90
7344 8017 7.880713 GGGTTGTGGTCCAAATTATTTTATTGT 59.119 33.333 0.00 0.00 34.07 2.71
7345 8018 9.278978 GGTTGTGGTCCAAATTATTTTATTGTT 57.721 29.630 0.00 0.00 34.07 2.83
7398 8071 9.729281 TTGGTATTAGGGTTGTTTACTTAGAAG 57.271 33.333 0.00 0.00 0.00 2.85
7399 8072 8.883302 TGGTATTAGGGTTGTTTACTTAGAAGT 58.117 33.333 0.00 0.00 42.91 3.01
7400 8073 9.376075 GGTATTAGGGTTGTTTACTTAGAAGTC 57.624 37.037 0.00 0.00 40.37 3.01
7401 8074 9.933723 GTATTAGGGTTGTTTACTTAGAAGTCA 57.066 33.333 0.00 0.00 40.37 3.41
7403 8076 8.897872 TTAGGGTTGTTTACTTAGAAGTCAAG 57.102 34.615 0.00 0.00 40.37 3.02
7404 8077 6.896883 AGGGTTGTTTACTTAGAAGTCAAGT 58.103 36.000 0.00 0.00 40.37 3.16
7405 8078 8.026396 AGGGTTGTTTACTTAGAAGTCAAGTA 57.974 34.615 0.00 0.00 40.37 2.24
7406 8079 8.488668 AGGGTTGTTTACTTAGAAGTCAAGTAA 58.511 33.333 0.00 4.08 43.35 2.24
7413 8086 9.978044 TTTACTTAGAAGTCAAGTAAACCTCTC 57.022 33.333 13.59 0.00 46.13 3.20
7414 8087 7.842887 ACTTAGAAGTCAAGTAAACCTCTCT 57.157 36.000 0.00 0.00 34.50 3.10
7415 8088 8.937207 ACTTAGAAGTCAAGTAAACCTCTCTA 57.063 34.615 0.00 0.00 34.50 2.43
7416 8089 9.536510 ACTTAGAAGTCAAGTAAACCTCTCTAT 57.463 33.333 0.00 0.00 34.50 1.98
7461 8134 9.671279 TCAATCTAATCAAGTAAGAAGCAATCA 57.329 29.630 0.00 0.00 0.00 2.57
7462 8135 9.932699 CAATCTAATCAAGTAAGAAGCAATCAG 57.067 33.333 0.00 0.00 0.00 2.90
7463 8136 9.678260 AATCTAATCAAGTAAGAAGCAATCAGT 57.322 29.630 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.034896 GTGTGATCGACAAGGGGTGT 59.965 55.000 0.00 0.00 45.74 4.16
1 2 0.321671 AGTGTGATCGACAAGGGGTG 59.678 55.000 0.00 0.00 35.91 4.61
11 12 1.204704 TGCCTCTTGGTAGTGTGATCG 59.795 52.381 0.00 0.00 35.27 3.69
13 14 4.384208 GGTTATGCCTCTTGGTAGTGTGAT 60.384 45.833 0.00 0.00 35.27 3.06
14 15 3.055385 GGTTATGCCTCTTGGTAGTGTGA 60.055 47.826 0.00 0.00 35.27 3.58
20 21 2.026636 GTGGTGGTTATGCCTCTTGGTA 60.027 50.000 0.00 0.00 38.35 3.25
32 33 1.149627 GTGGCAGTGGTGGTGGTTA 59.850 57.895 0.00 0.00 0.00 2.85
41 42 3.357079 GCTTCGTGGTGGCAGTGG 61.357 66.667 0.00 0.00 0.00 4.00
62 63 1.949847 GCTACCAGGCAGCTCTTCGA 61.950 60.000 4.13 0.00 36.07 3.71
65 66 2.674220 GGGCTACCAGGCAGCTCTT 61.674 63.158 11.75 0.00 43.44 2.85
99 102 1.326951 TTCGACATCGGATGCAGGGA 61.327 55.000 17.61 7.23 40.29 4.20
103 106 0.179111 GAGGTTCGACATCGGATGCA 60.179 55.000 17.61 0.00 40.29 3.96
104 107 0.179111 TGAGGTTCGACATCGGATGC 60.179 55.000 17.61 9.62 40.29 3.91
113 116 1.488527 GCATCGGTATGAGGTTCGAC 58.511 55.000 0.00 0.00 34.84 4.20
116 119 1.134521 TGTGGCATCGGTATGAGGTTC 60.135 52.381 0.00 0.00 34.84 3.62
124 127 2.030401 GCACGTTGTGGCATCGGTA 61.030 57.895 12.48 0.00 33.64 4.02
130 133 2.751837 TGGTTGCACGTTGTGGCA 60.752 55.556 0.00 0.00 38.46 4.92
151 154 1.480954 CTTGCTTCCCGTCCTAGCTAA 59.519 52.381 0.00 0.00 35.93 3.09
152 155 1.112113 CTTGCTTCCCGTCCTAGCTA 58.888 55.000 0.00 0.00 35.93 3.32
154 157 1.815840 GCTTGCTTCCCGTCCTAGC 60.816 63.158 0.00 0.00 35.50 3.42
156 159 1.295423 GTGCTTGCTTCCCGTCCTA 59.705 57.895 0.00 0.00 0.00 2.94
184 187 3.703127 GGTGGGGTCTCGTGGGTC 61.703 72.222 0.00 0.00 0.00 4.46
203 206 2.480416 GCATCTCTCTGTTCTACCGGTG 60.480 54.545 19.93 7.59 0.00 4.94
204 207 1.751924 GCATCTCTCTGTTCTACCGGT 59.248 52.381 13.98 13.98 0.00 5.28
285 289 3.751246 TCGGTAGTTGGTCGGCGG 61.751 66.667 7.21 0.00 0.00 6.13
286 290 2.505557 GTCGGTAGTTGGTCGGCG 60.506 66.667 0.00 0.00 0.00 6.46
287 291 1.005867 TTGTCGGTAGTTGGTCGGC 60.006 57.895 0.00 0.00 0.00 5.54
288 292 1.012486 GCTTGTCGGTAGTTGGTCGG 61.012 60.000 0.00 0.00 0.00 4.79
289 293 0.319211 TGCTTGTCGGTAGTTGGTCG 60.319 55.000 0.00 0.00 0.00 4.79
290 294 1.145803 GTGCTTGTCGGTAGTTGGTC 58.854 55.000 0.00 0.00 0.00 4.02
291 295 0.250166 GGTGCTTGTCGGTAGTTGGT 60.250 55.000 0.00 0.00 0.00 3.67
292 296 0.250124 TGGTGCTTGTCGGTAGTTGG 60.250 55.000 0.00 0.00 0.00 3.77
293 297 0.865769 GTGGTGCTTGTCGGTAGTTG 59.134 55.000 0.00 0.00 0.00 3.16
294 298 0.250166 GGTGGTGCTTGTCGGTAGTT 60.250 55.000 0.00 0.00 0.00 2.24
295 299 1.370064 GGTGGTGCTTGTCGGTAGT 59.630 57.895 0.00 0.00 0.00 2.73
296 300 1.736645 CGGTGGTGCTTGTCGGTAG 60.737 63.158 0.00 0.00 0.00 3.18
297 301 2.340809 CGGTGGTGCTTGTCGGTA 59.659 61.111 0.00 0.00 0.00 4.02
298 302 4.619227 CCGGTGGTGCTTGTCGGT 62.619 66.667 0.00 0.00 36.38 4.69
325 329 2.104572 ATCTGATGGGGCATCGGTCG 62.105 60.000 0.00 0.00 44.81 4.79
330 334 2.867624 TGCTAAATCTGATGGGGCATC 58.132 47.619 7.32 0.00 40.88 3.91
331 335 2.961062 GTTGCTAAATCTGATGGGGCAT 59.039 45.455 10.74 0.00 0.00 4.40
332 336 2.025037 AGTTGCTAAATCTGATGGGGCA 60.025 45.455 7.32 7.32 0.00 5.36
347 351 2.499289 CCTGTACAGATCTGGAGTTGCT 59.501 50.000 26.08 6.34 34.19 3.91
355 359 1.832912 GGCCCCCTGTACAGATCTG 59.167 63.158 24.68 21.37 0.00 2.90
373 377 3.506059 CTATCAGGGCGGCTGGACG 62.506 68.421 9.56 0.00 0.00 4.79
419 423 0.102481 ACGCGTCATAAGGGTGCTAG 59.898 55.000 5.58 0.00 33.41 3.42
420 424 0.101759 GACGCGTCATAAGGGTGCTA 59.898 55.000 33.09 0.00 34.85 3.49
421 425 1.153628 GACGCGTCATAAGGGTGCT 60.154 57.895 33.09 0.00 34.85 4.40
429 433 0.033642 TTGGTGGTTGACGCGTCATA 59.966 50.000 39.38 26.81 39.64 2.15
434 438 3.218209 GACGTTGGTGGTTGACGCG 62.218 63.158 3.53 3.53 40.22 6.01
464 476 0.955428 TCTTTGCGATGGTGACCAGC 60.955 55.000 10.36 10.36 36.75 4.85
467 479 0.798776 CAGTCTTTGCGATGGTGACC 59.201 55.000 0.00 0.00 0.00 4.02
479 491 4.626081 AGCGGGCGTGCAGTCTTT 62.626 61.111 3.15 0.00 37.31 2.52
495 507 2.044650 CAGGTGGTGGATGCCCAG 60.045 66.667 0.00 0.00 44.55 4.45
496 508 2.858476 ACAGGTGGTGGATGCCCA 60.858 61.111 0.00 0.00 40.95 5.36
503 518 0.895100 CATTGGTGGACAGGTGGTGG 60.895 60.000 0.00 0.00 0.00 4.61
511 526 1.532794 GTTGGGGCATTGGTGGACA 60.533 57.895 0.00 0.00 0.00 4.02
519 534 4.669809 TTCGGCGGTTGGGGCATT 62.670 61.111 7.21 0.00 0.00 3.56
520 535 4.669809 TTTCGGCGGTTGGGGCAT 62.670 61.111 7.21 0.00 0.00 4.40
531 546 2.254350 GGTTGGCTTCGTTTCGGC 59.746 61.111 0.00 0.00 0.00 5.54
566 582 1.348008 ATGATGGTGATGGCTCCCGT 61.348 55.000 0.00 0.00 0.00 5.28
576 592 1.685803 GGGTTGGCATCATGATGGTGA 60.686 52.381 31.62 0.00 39.16 4.02
577 593 0.748450 GGGTTGGCATCATGATGGTG 59.252 55.000 31.62 13.45 39.16 4.17
585 601 2.440147 CCAGTGGGGTTGGCATCA 59.560 61.111 0.00 0.00 0.00 3.07
600 617 1.212688 CTCTACATGGGATGTTGGCCA 59.787 52.381 0.00 0.00 41.63 5.36
609 626 0.636647 TGAGGCCTCTCTACATGGGA 59.363 55.000 32.28 6.14 40.58 4.37
610 627 0.755686 GTGAGGCCTCTCTACATGGG 59.244 60.000 32.28 0.00 40.58 4.00
676 935 1.219393 GCTTCCTTCTCCCTCACCG 59.781 63.158 0.00 0.00 0.00 4.94
679 938 1.557269 GCCAGCTTCCTTCTCCCTCA 61.557 60.000 0.00 0.00 0.00 3.86
682 941 1.077858 CAGCCAGCTTCCTTCTCCC 60.078 63.158 0.00 0.00 0.00 4.30
738 997 4.135153 CCCTGCCCTCTCGTGTCG 62.135 72.222 0.00 0.00 0.00 4.35
744 1003 0.034960 GACTTTTCCCCTGCCCTCTC 60.035 60.000 0.00 0.00 0.00 3.20
745 1004 1.501654 GGACTTTTCCCCTGCCCTCT 61.502 60.000 0.00 0.00 35.57 3.69
751 1010 6.614657 AGGATTATTATGGACTTTTCCCCTG 58.385 40.000 0.00 0.00 42.01 4.45
752 1011 6.465894 CGAGGATTATTATGGACTTTTCCCCT 60.466 42.308 0.00 0.00 42.01 4.79
769 1028 7.584122 ACTAATTACTCAAGAGCGAGGATTA 57.416 36.000 0.00 0.00 37.34 1.75
800 1059 9.472361 GCGTCTTATATATTTGTTTACAGAGGA 57.528 33.333 0.00 0.00 0.00 3.71
825 1100 3.081804 TCTTTCTTTCGGGGAAATGAGC 58.918 45.455 0.00 0.00 33.12 4.26
828 1103 2.161609 CGGTCTTTCTTTCGGGGAAATG 59.838 50.000 0.00 0.00 33.12 2.32
836 1111 4.799419 TTTGTTACCGGTCTTTCTTTCG 57.201 40.909 12.40 0.00 0.00 3.46
932 1211 6.386654 TCTTCTTCCAAAGTTTGTTTGTGAC 58.613 36.000 14.36 0.00 0.00 3.67
933 1212 6.582677 TCTTCTTCCAAAGTTTGTTTGTGA 57.417 33.333 14.36 1.49 0.00 3.58
934 1213 5.289434 GCTCTTCTTCCAAAGTTTGTTTGTG 59.711 40.000 14.36 0.00 0.00 3.33
935 1214 5.185828 AGCTCTTCTTCCAAAGTTTGTTTGT 59.814 36.000 14.36 0.00 0.00 2.83
936 1215 5.654497 AGCTCTTCTTCCAAAGTTTGTTTG 58.346 37.500 14.36 4.16 0.00 2.93
937 1216 5.418840 TGAGCTCTTCTTCCAAAGTTTGTTT 59.581 36.000 16.19 0.00 0.00 2.83
938 1217 4.949856 TGAGCTCTTCTTCCAAAGTTTGTT 59.050 37.500 16.19 0.00 0.00 2.83
939 1218 4.526970 TGAGCTCTTCTTCCAAAGTTTGT 58.473 39.130 16.19 0.00 0.00 2.83
955 1234 0.247894 CAGTCGTCTACGCTGAGCTC 60.248 60.000 6.82 6.82 42.05 4.09
965 1244 2.158928 GCTCTCTACTCCCAGTCGTCTA 60.159 54.545 0.00 0.00 0.00 2.59
1098 1377 4.083862 AAGACGCCGGCCCTCTTC 62.084 66.667 23.46 9.67 0.00 2.87
1108 1387 2.669569 TTGCTGCTCCAAGACGCC 60.670 61.111 0.00 0.00 0.00 5.68
1127 1406 4.399395 TGCGGGCTGCTTCCTCTG 62.399 66.667 20.66 0.00 46.63 3.35
1148 1427 3.538785 TAACCTTGGCCAGCGCGAA 62.539 57.895 12.10 0.00 35.02 4.70
1157 1436 3.497031 GTCGGCGCTAACCTTGGC 61.497 66.667 7.64 0.00 0.00 4.52
1170 1449 1.107538 TATGAAGAGGGCCTCGTCGG 61.108 60.000 34.00 0.00 40.79 4.79
1219 1498 1.416401 TGGACAAGAAGAAAGCGTCCT 59.584 47.619 8.24 0.00 45.25 3.85
1272 1551 4.554036 GACCCCGGCCTCTGCATC 62.554 72.222 0.00 0.00 40.13 3.91
1275 1554 4.554036 GATGACCCCGGCCTCTGC 62.554 72.222 0.00 0.00 0.00 4.26
1276 1555 3.866582 GGATGACCCCGGCCTCTG 61.867 72.222 0.00 0.00 0.00 3.35
1286 1565 2.209690 TTTTCGGAAAGGGGATGACC 57.790 50.000 3.09 0.00 39.11 4.02
1287 1566 3.418047 TCTTTTTCGGAAAGGGGATGAC 58.582 45.455 3.09 0.00 0.00 3.06
1288 1567 3.799432 TCTTTTTCGGAAAGGGGATGA 57.201 42.857 3.09 0.00 0.00 2.92
1289 1568 4.864704 TTTCTTTTTCGGAAAGGGGATG 57.135 40.909 3.09 0.00 0.00 3.51
1290 1569 4.651962 TGTTTTCTTTTTCGGAAAGGGGAT 59.348 37.500 3.09 0.00 34.73 3.85
1291 1570 4.024670 TGTTTTCTTTTTCGGAAAGGGGA 58.975 39.130 3.09 1.48 34.73 4.81
1292 1571 4.368315 CTGTTTTCTTTTTCGGAAAGGGG 58.632 43.478 3.09 0.00 34.73 4.79
1293 1572 4.142026 ACCTGTTTTCTTTTTCGGAAAGGG 60.142 41.667 3.09 1.53 34.73 3.95
1294 1573 5.006153 ACCTGTTTTCTTTTTCGGAAAGG 57.994 39.130 3.09 2.52 34.73 3.11
1295 1574 5.041287 GGACCTGTTTTCTTTTTCGGAAAG 58.959 41.667 3.09 6.02 34.73 2.62
1296 1575 4.142116 GGGACCTGTTTTCTTTTTCGGAAA 60.142 41.667 0.00 0.00 0.00 3.13
1297 1576 3.382227 GGGACCTGTTTTCTTTTTCGGAA 59.618 43.478 0.00 0.00 0.00 4.30
1298 1577 2.953648 GGGACCTGTTTTCTTTTTCGGA 59.046 45.455 0.00 0.00 0.00 4.55
1299 1578 2.956333 AGGGACCTGTTTTCTTTTTCGG 59.044 45.455 0.00 0.00 0.00 4.30
1300 1579 5.959618 ATAGGGACCTGTTTTCTTTTTCG 57.040 39.130 0.00 0.00 0.00 3.46
1301 1580 6.455647 CCAATAGGGACCTGTTTTCTTTTTC 58.544 40.000 0.00 0.00 40.01 2.29
1302 1581 6.419484 CCAATAGGGACCTGTTTTCTTTTT 57.581 37.500 0.00 0.00 40.01 1.94
1331 1610 9.872757 TTGAATTTTAGTCGAAACACAGTTATC 57.127 29.630 0.00 0.00 0.00 1.75
1336 1615 7.908082 TCTGTTTGAATTTTAGTCGAAACACAG 59.092 33.333 0.00 0.00 31.76 3.66
1392 1674 9.276590 TGTATCAGAAAATCGCATTATCAAGAT 57.723 29.630 0.00 0.00 0.00 2.40
1430 1712 4.651778 TCACAAATGTCCCCTACTGAAAG 58.348 43.478 0.00 0.00 42.29 2.62
1485 1767 5.856156 TGTGAAAAAGCATTCCATGTTCAT 58.144 33.333 0.00 0.00 0.00 2.57
1551 1833 2.032549 GCGCAGGCAGTTACATAATCTG 60.033 50.000 0.30 0.00 39.62 2.90
1677 1959 1.860950 CCATTGCGACTTCACTATCCG 59.139 52.381 0.00 0.00 0.00 4.18
1681 1963 0.981183 ACCCCATTGCGACTTCACTA 59.019 50.000 0.00 0.00 0.00 2.74
1699 1981 3.370978 CACAGATTTGGGTCATCGTGTAC 59.629 47.826 0.00 0.00 0.00 2.90
1803 2085 6.268825 TGTAGAAGTGTGGTCTGTATCTTC 57.731 41.667 0.00 0.00 33.73 2.87
1841 2123 8.353684 AGAAGTATCAGTTTCCACATCTATACG 58.646 37.037 0.00 0.00 0.00 3.06
1960 2308 5.123936 AGGCCGGTCATAAAGACTATTTTC 58.876 41.667 9.71 0.00 46.72 2.29
2024 2565 4.609301 ACAGGCTTAAATTGGCAAGGATA 58.391 39.130 5.96 0.00 0.00 2.59
2143 2685 5.046014 AGCACTTCTCTTGATTGACTATGGT 60.046 40.000 0.00 0.00 0.00 3.55
2166 2708 7.538678 GGTTCAGAAAACTACAATGCACATAAG 59.461 37.037 0.00 0.00 0.00 1.73
2168 2710 6.072175 GGGTTCAGAAAACTACAATGCACATA 60.072 38.462 0.00 0.00 0.00 2.29
2287 2829 1.346365 GTCGTCTCGCAACAATAGCA 58.654 50.000 0.00 0.00 0.00 3.49
2368 2910 3.701542 AGTTACCATCTCGCTCATCAAGA 59.298 43.478 0.00 0.00 0.00 3.02
2404 2946 2.325583 ACAGTTCGTGAGCCAAGAAA 57.674 45.000 5.44 0.00 34.16 2.52
2716 3266 8.800231 TGTTCACAGAACAACAAAATGATATG 57.200 30.769 9.91 0.00 29.43 1.78
2956 3506 7.041916 GGCATCATCTAGTGAAGAAGAATTCAG 60.042 40.741 8.44 0.00 42.93 3.02
3069 3619 7.878644 ACCTTGTTCTTCATAGTTTTAGAGTCC 59.121 37.037 0.00 0.00 0.00 3.85
3186 3736 6.579666 AAGTGCTTCATATTGTGTTCACAT 57.420 33.333 6.47 0.92 0.00 3.21
3359 3909 7.445402 TGGAAGTATAGGCAGAAATGCTATTTC 59.555 37.037 11.41 11.41 34.73 2.17
3368 3918 3.369052 CGTGGTGGAAGTATAGGCAGAAA 60.369 47.826 0.00 0.00 0.00 2.52
3434 3984 6.554334 TTAGGAAATTGAAGAACTCAACGG 57.446 37.500 0.00 0.00 46.80 4.44
3534 4084 8.450578 TCTTGGCTTTGATACCATATTAAGTG 57.549 34.615 0.00 0.00 35.42 3.16
3566 4116 3.202906 CTGAAAACCGAGACCTGAAACA 58.797 45.455 0.00 0.00 0.00 2.83
3573 4123 2.151202 TCAATGCTGAAAACCGAGACC 58.849 47.619 0.00 0.00 0.00 3.85
3597 4148 3.304726 GGAAAGAAAGAGGGCGAGTTTTG 60.305 47.826 0.00 0.00 0.00 2.44
3601 4152 1.056660 TGGAAAGAAAGAGGGCGAGT 58.943 50.000 0.00 0.00 0.00 4.18
3604 4155 0.602905 ACGTGGAAAGAAAGAGGGCG 60.603 55.000 0.00 0.00 0.00 6.13
4049 4600 7.316393 TGGGTCTAAGAAAATGAAAGAGAGA 57.684 36.000 0.00 0.00 0.00 3.10
4126 4677 2.794631 GCGCGTCCTTTATTCCCAAATG 60.795 50.000 8.43 0.00 0.00 2.32
4209 4760 4.415596 TGTGAAGCTGACCCCATTAATTT 58.584 39.130 0.00 0.00 0.00 1.82
4228 4779 6.070897 TGTGAAGTTGACACCATTAATGTG 57.929 37.500 14.25 13.66 37.45 3.21
4424 4975 4.133820 CCGGCAAATCTAATATGTGACCA 58.866 43.478 0.00 0.00 0.00 4.02
4425 4976 4.385825 TCCGGCAAATCTAATATGTGACC 58.614 43.478 0.00 0.00 0.00 4.02
4426 4977 6.428159 AGAATCCGGCAAATCTAATATGTGAC 59.572 38.462 0.00 0.00 0.00 3.67
4427 4978 6.533730 AGAATCCGGCAAATCTAATATGTGA 58.466 36.000 0.00 0.00 0.00 3.58
4428 4979 6.808008 AGAATCCGGCAAATCTAATATGTG 57.192 37.500 0.00 0.00 0.00 3.21
4429 4980 8.918202 TTTAGAATCCGGCAAATCTAATATGT 57.082 30.769 14.56 0.00 35.11 2.29
4433 4984 8.695456 ACAAATTTAGAATCCGGCAAATCTAAT 58.305 29.630 14.56 3.73 35.11 1.73
4434 4985 8.062065 ACAAATTTAGAATCCGGCAAATCTAA 57.938 30.769 0.00 5.33 33.73 2.10
4435 4986 7.639113 ACAAATTTAGAATCCGGCAAATCTA 57.361 32.000 0.00 0.00 0.00 1.98
4436 4987 6.530019 ACAAATTTAGAATCCGGCAAATCT 57.470 33.333 0.00 0.00 0.00 2.40
4437 4988 8.871686 AATACAAATTTAGAATCCGGCAAATC 57.128 30.769 0.00 0.00 0.00 2.17
4438 4989 9.965824 CTAATACAAATTTAGAATCCGGCAAAT 57.034 29.630 0.00 0.00 0.00 2.32
4439 4990 8.962679 ACTAATACAAATTTAGAATCCGGCAAA 58.037 29.630 0.00 0.00 32.25 3.68
4440 4991 8.514330 ACTAATACAAATTTAGAATCCGGCAA 57.486 30.769 0.00 0.00 32.25 4.52
4441 4992 7.042321 CGACTAATACAAATTTAGAATCCGGCA 60.042 37.037 0.00 0.00 32.25 5.69
4442 4993 7.288672 CGACTAATACAAATTTAGAATCCGGC 58.711 38.462 0.00 0.00 32.25 6.13
4443 4994 7.042321 TGCGACTAATACAAATTTAGAATCCGG 60.042 37.037 0.00 0.00 32.25 5.14
4444 4995 7.847487 TGCGACTAATACAAATTTAGAATCCG 58.153 34.615 0.00 0.00 32.25 4.18
4454 5005 9.988350 CAAAAGTAGAATGCGACTAATACAAAT 57.012 29.630 0.00 0.00 29.32 2.32
4455 5006 8.447833 CCAAAAGTAGAATGCGACTAATACAAA 58.552 33.333 0.00 0.00 29.32 2.83
4456 5007 7.604927 ACCAAAAGTAGAATGCGACTAATACAA 59.395 33.333 0.00 0.00 29.32 2.41
4457 5008 7.101054 ACCAAAAGTAGAATGCGACTAATACA 58.899 34.615 0.00 0.00 29.32 2.29
4458 5009 7.277098 TGACCAAAAGTAGAATGCGACTAATAC 59.723 37.037 0.00 0.00 29.32 1.89
4835 5386 4.511527 GAGCATCTTCATCCTTGACTTCA 58.488 43.478 0.00 0.00 0.00 3.02
4876 5430 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
4877 5431 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
4878 5432 2.026636 TCACTTATTTTGGGACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
4879 5433 3.007635 GTCACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
4880 5434 3.933332 GAGTCACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 33.84 4.63
4881 5435 3.325425 TGAGTCACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 33.84 4.69
4882 5436 3.670625 TGAGTCACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 33.84 4.79
4883 5437 4.755123 ACTTGAGTCACTTATTTTGGGACG 59.245 41.667 0.00 0.00 33.84 4.79
4884 5438 6.635030 AACTTGAGTCACTTATTTTGGGAC 57.365 37.500 0.00 0.00 0.00 4.46
4885 5439 6.605594 ACAAACTTGAGTCACTTATTTTGGGA 59.394 34.615 9.57 0.00 0.00 4.37
4886 5440 6.805713 ACAAACTTGAGTCACTTATTTTGGG 58.194 36.000 9.57 0.00 0.00 4.12
4887 5441 8.621286 AGTACAAACTTGAGTCACTTATTTTGG 58.379 33.333 9.57 0.00 29.00 3.28
4893 5447 9.880157 AAAGTTAGTACAAACTTGAGTCACTTA 57.120 29.630 2.97 0.00 46.40 2.24
4894 5448 8.665685 CAAAGTTAGTACAAACTTGAGTCACTT 58.334 33.333 2.97 0.00 46.40 3.16
4895 5449 7.201617 GCAAAGTTAGTACAAACTTGAGTCACT 60.202 37.037 2.97 0.00 46.40 3.41
4896 5450 6.905609 GCAAAGTTAGTACAAACTTGAGTCAC 59.094 38.462 2.97 0.00 46.40 3.67
4897 5451 6.596106 TGCAAAGTTAGTACAAACTTGAGTCA 59.404 34.615 2.97 0.00 46.40 3.41
4898 5452 6.905609 GTGCAAAGTTAGTACAAACTTGAGTC 59.094 38.462 2.97 0.00 46.40 3.36
4899 5453 6.598064 AGTGCAAAGTTAGTACAAACTTGAGT 59.402 34.615 2.97 0.00 46.40 3.41
4900 5454 7.016361 AGTGCAAAGTTAGTACAAACTTGAG 57.984 36.000 2.97 1.53 46.40 3.02
4901 5455 6.995511 AGTGCAAAGTTAGTACAAACTTGA 57.004 33.333 2.97 0.00 46.40 3.02
4902 5456 9.006215 GTTTAGTGCAAAGTTAGTACAAACTTG 57.994 33.333 2.97 0.00 46.40 3.16
4904 5458 8.502105 AGTTTAGTGCAAAGTTAGTACAAACT 57.498 30.769 0.00 0.00 41.46 2.66
4920 5474 7.652507 AGTGACTCTTTGTACTAAGTTTAGTGC 59.347 37.037 15.24 12.50 43.44 4.40
4921 5475 9.530633 AAGTGACTCTTTGTACTAAGTTTAGTG 57.469 33.333 15.24 4.89 37.55 2.74
4929 5483 9.280174 CCCAAAATAAGTGACTCTTTGTACTAA 57.720 33.333 11.40 0.00 37.56 2.24
4930 5484 8.653191 TCCCAAAATAAGTGACTCTTTGTACTA 58.347 33.333 11.40 0.00 37.56 1.82
4931 5485 7.514721 TCCCAAAATAAGTGACTCTTTGTACT 58.485 34.615 11.40 0.00 37.56 2.73
4932 5486 7.739498 TCCCAAAATAAGTGACTCTTTGTAC 57.261 36.000 11.40 0.00 37.56 2.90
4933 5487 7.393234 CCATCCCAAAATAAGTGACTCTTTGTA 59.607 37.037 11.40 3.48 37.56 2.41
4934 5488 6.209391 CCATCCCAAAATAAGTGACTCTTTGT 59.791 38.462 11.40 0.00 37.56 2.83
4935 5489 6.434028 TCCATCCCAAAATAAGTGACTCTTTG 59.566 38.462 7.43 7.43 37.56 2.77
4936 5490 6.552008 TCCATCCCAAAATAAGTGACTCTTT 58.448 36.000 0.00 0.00 37.56 2.52
4937 5491 6.139679 TCCATCCCAAAATAAGTGACTCTT 57.860 37.500 0.00 0.00 39.89 2.85
4938 5492 5.339530 CCTCCATCCCAAAATAAGTGACTCT 60.340 44.000 0.00 0.00 0.00 3.24
4939 5493 4.884164 CCTCCATCCCAAAATAAGTGACTC 59.116 45.833 0.00 0.00 0.00 3.36
4940 5494 4.325344 CCCTCCATCCCAAAATAAGTGACT 60.325 45.833 0.00 0.00 0.00 3.41
4941 5495 3.954258 CCCTCCATCCCAAAATAAGTGAC 59.046 47.826 0.00 0.00 0.00 3.67
4942 5496 3.855599 TCCCTCCATCCCAAAATAAGTGA 59.144 43.478 0.00 0.00 0.00 3.41
4943 5497 4.210331 CTCCCTCCATCCCAAAATAAGTG 58.790 47.826 0.00 0.00 0.00 3.16
4944 5498 3.858638 ACTCCCTCCATCCCAAAATAAGT 59.141 43.478 0.00 0.00 0.00 2.24
4945 5499 4.526438 ACTCCCTCCATCCCAAAATAAG 57.474 45.455 0.00 0.00 0.00 1.73
4946 5500 6.606241 AATACTCCCTCCATCCCAAAATAA 57.394 37.500 0.00 0.00 0.00 1.40
4947 5501 6.606241 AAATACTCCCTCCATCCCAAAATA 57.394 37.500 0.00 0.00 0.00 1.40
4948 5502 5.487861 AAATACTCCCTCCATCCCAAAAT 57.512 39.130 0.00 0.00 0.00 1.82
4949 5503 4.965283 AAATACTCCCTCCATCCCAAAA 57.035 40.909 0.00 0.00 0.00 2.44
4950 5504 4.415512 CCTAAATACTCCCTCCATCCCAAA 59.584 45.833 0.00 0.00 0.00 3.28
4951 5505 3.980698 CCTAAATACTCCCTCCATCCCAA 59.019 47.826 0.00 0.00 0.00 4.12
4952 5506 3.598264 CCTAAATACTCCCTCCATCCCA 58.402 50.000 0.00 0.00 0.00 4.37
4953 5507 2.913617 CCCTAAATACTCCCTCCATCCC 59.086 54.545 0.00 0.00 0.00 3.85
4954 5508 3.841255 CTCCCTAAATACTCCCTCCATCC 59.159 52.174 0.00 0.00 0.00 3.51
4955 5509 4.753186 TCTCCCTAAATACTCCCTCCATC 58.247 47.826 0.00 0.00 0.00 3.51
4956 5510 4.852991 TCTCCCTAAATACTCCCTCCAT 57.147 45.455 0.00 0.00 0.00 3.41
4957 5511 4.852991 ATCTCCCTAAATACTCCCTCCA 57.147 45.455 0.00 0.00 0.00 3.86
4958 5512 7.816300 AAATATCTCCCTAAATACTCCCTCC 57.184 40.000 0.00 0.00 0.00 4.30
4960 5514 9.860393 ACATAAATATCTCCCTAAATACTCCCT 57.140 33.333 0.00 0.00 0.00 4.20
5061 5616 5.500546 ACCTTGTTTCTTCCCCTACTTAG 57.499 43.478 0.00 0.00 0.00 2.18
5238 5794 1.838112 CCTATGACAAAAGGCTGGCA 58.162 50.000 3.38 0.00 39.14 4.92
5262 5818 2.805099 CTGTCACAACTCAAGGAAGAGC 59.195 50.000 0.00 0.00 39.26 4.09
5278 5834 0.895530 GAGACCCGACCATTCTGTCA 59.104 55.000 0.00 0.00 34.88 3.58
5308 5864 0.388649 AGTGGAATGCTCGTGTCGTC 60.389 55.000 0.00 0.00 0.00 4.20
5530 6102 4.152223 TGCATCCGACGCAATAAATATGAG 59.848 41.667 0.00 0.00 36.17 2.90
5531 6103 4.061596 TGCATCCGACGCAATAAATATGA 58.938 39.130 0.00 0.00 36.17 2.15
5684 6259 7.516481 GCTCAATGCTTACATGTCAGTATATG 58.484 38.462 10.52 10.72 36.36 1.78
5799 6374 9.573133 CCCTCACATTAAAATTTGATAGACAAC 57.427 33.333 0.00 0.00 38.29 3.32
5824 6399 9.005777 TGAAGTGTGGTTTCTGTAAATATAACC 57.994 33.333 0.00 0.00 38.92 2.85
5900 6475 2.001076 AAGCAGGAACCCAAAGGAAG 57.999 50.000 0.00 0.00 36.73 3.46
5902 6477 2.025321 GGATAAGCAGGAACCCAAAGGA 60.025 50.000 0.00 0.00 36.73 3.36
5961 6536 9.048446 CATTCATTGTCAAATCCTTGTCTTTTT 57.952 29.630 0.00 0.00 33.94 1.94
5962 6537 7.172019 GCATTCATTGTCAAATCCTTGTCTTTT 59.828 33.333 0.00 0.00 33.94 2.27
5963 6538 6.647895 GCATTCATTGTCAAATCCTTGTCTTT 59.352 34.615 0.00 0.00 33.94 2.52
5964 6539 6.014840 AGCATTCATTGTCAAATCCTTGTCTT 60.015 34.615 0.00 0.00 33.94 3.01
5965 6540 5.479375 AGCATTCATTGTCAAATCCTTGTCT 59.521 36.000 0.00 0.00 33.94 3.41
5966 6541 5.717119 AGCATTCATTGTCAAATCCTTGTC 58.283 37.500 0.00 0.00 33.94 3.18
5967 6542 5.733620 AGCATTCATTGTCAAATCCTTGT 57.266 34.783 0.00 0.00 33.94 3.16
5968 6543 8.600625 CATTTAGCATTCATTGTCAAATCCTTG 58.399 33.333 0.00 0.00 0.00 3.61
5969 6544 7.767198 CCATTTAGCATTCATTGTCAAATCCTT 59.233 33.333 0.00 0.00 0.00 3.36
5970 6545 7.270047 CCATTTAGCATTCATTGTCAAATCCT 58.730 34.615 0.00 0.00 0.00 3.24
5971 6546 6.480981 CCCATTTAGCATTCATTGTCAAATCC 59.519 38.462 0.00 0.00 0.00 3.01
5972 6547 6.018507 GCCCATTTAGCATTCATTGTCAAATC 60.019 38.462 0.00 0.00 0.00 2.17
5973 6548 5.818857 GCCCATTTAGCATTCATTGTCAAAT 59.181 36.000 0.00 0.00 0.00 2.32
5974 6549 5.177326 GCCCATTTAGCATTCATTGTCAAA 58.823 37.500 0.00 0.00 0.00 2.69
5975 6550 4.382901 GGCCCATTTAGCATTCATTGTCAA 60.383 41.667 0.00 0.00 0.00 3.18
5976 6551 3.132646 GGCCCATTTAGCATTCATTGTCA 59.867 43.478 0.00 0.00 0.00 3.58
6123 6708 0.723981 CCTCTTAGCGAGCAGTTTGC 59.276 55.000 0.00 0.00 45.46 3.68
6236 6821 6.899089 TGGGAGTTCTGCATAAAAGATGATA 58.101 36.000 0.00 0.00 0.00 2.15
6243 6828 3.745799 TCGTTGGGAGTTCTGCATAAAA 58.254 40.909 0.00 0.00 0.00 1.52
6358 6943 8.146479 TGAGAAGAATTAATCGTTGGATGATG 57.854 34.615 0.00 0.00 31.83 3.07
6367 6952 6.531948 CCGTCTCTTTGAGAAGAATTAATCGT 59.468 38.462 11.06 0.00 40.59 3.73
6482 7067 6.878923 TCTTCTACAAACATCACCGATCAATT 59.121 34.615 0.00 0.00 0.00 2.32
6485 7070 5.400066 TCTTCTACAAACATCACCGATCA 57.600 39.130 0.00 0.00 0.00 2.92
6486 7071 7.921214 TCTTATCTTCTACAAACATCACCGATC 59.079 37.037 0.00 0.00 0.00 3.69
6519 7114 2.557869 ACACTATCCCTGGCAACCTAA 58.442 47.619 0.00 0.00 0.00 2.69
6533 7128 7.549488 GCTGTAACTTCATAAGACCAACACTAT 59.451 37.037 0.00 0.00 0.00 2.12
6673 7268 1.246649 ATTGACTGCATGCACCGAAA 58.753 45.000 18.46 9.43 0.00 3.46
6733 7361 4.039004 ACCAGCAATGTTCACAGCAATAAA 59.961 37.500 0.00 0.00 0.00 1.40
6861 7523 9.944663 TTAATTCTAGTTGTGTGTGTCATTTTC 57.055 29.630 0.00 0.00 0.00 2.29
6935 7597 7.823745 AACATCAGATTCCAACTGTAAAAGT 57.176 32.000 0.00 0.00 42.60 2.66
6941 7603 5.248640 CACCTAACATCAGATTCCAACTGT 58.751 41.667 0.00 0.00 36.81 3.55
6942 7604 4.095483 GCACCTAACATCAGATTCCAACTG 59.905 45.833 0.00 0.00 36.80 3.16
6943 7605 4.018960 AGCACCTAACATCAGATTCCAACT 60.019 41.667 0.00 0.00 0.00 3.16
6944 7606 4.265073 AGCACCTAACATCAGATTCCAAC 58.735 43.478 0.00 0.00 0.00 3.77
6945 7607 4.019411 TGAGCACCTAACATCAGATTCCAA 60.019 41.667 0.00 0.00 0.00 3.53
6946 7608 3.519107 TGAGCACCTAACATCAGATTCCA 59.481 43.478 0.00 0.00 0.00 3.53
6947 7609 4.142609 TGAGCACCTAACATCAGATTCC 57.857 45.455 0.00 0.00 0.00 3.01
6948 7610 5.363101 TGATGAGCACCTAACATCAGATTC 58.637 41.667 0.00 0.00 43.17 2.52
6949 7611 5.363562 TGATGAGCACCTAACATCAGATT 57.636 39.130 0.00 0.00 43.17 2.40
6954 7616 7.201591 GCATATGTATGATGAGCACCTAACATC 60.202 40.741 4.29 0.00 40.22 3.06
6955 7617 6.596888 GCATATGTATGATGAGCACCTAACAT 59.403 38.462 4.29 0.00 35.75 2.71
6996 7658 5.363101 CATTGCTGCCTTAATCTCACTCTA 58.637 41.667 0.00 0.00 0.00 2.43
7032 7694 1.525077 GCTGTGAACGAACCCACCA 60.525 57.895 0.00 0.00 32.61 4.17
7055 7717 1.269726 CGCATATTTTGGGGTCATGGC 60.270 52.381 0.00 0.00 34.74 4.40
7057 7719 4.383850 TTTCGCATATTTTGGGGTCATG 57.616 40.909 0.00 0.00 38.74 3.07
7059 7721 5.197451 AGTATTTCGCATATTTTGGGGTCA 58.803 37.500 0.00 0.00 38.74 4.02
7060 7722 5.767816 AGTATTTCGCATATTTTGGGGTC 57.232 39.130 0.00 0.00 38.74 4.46
7061 7723 5.068591 GGAAGTATTTCGCATATTTTGGGGT 59.931 40.000 0.00 0.00 38.74 4.95
7062 7724 5.301805 AGGAAGTATTTCGCATATTTTGGGG 59.698 40.000 0.00 0.00 38.74 4.96
7066 7739 7.865706 ACAGAGGAAGTATTTCGCATATTTT 57.134 32.000 0.00 0.00 33.98 1.82
7080 7753 7.974501 CGACAAATATTACAGTACAGAGGAAGT 59.025 37.037 0.00 0.00 0.00 3.01
7081 7754 7.043325 GCGACAAATATTACAGTACAGAGGAAG 60.043 40.741 0.00 0.00 0.00 3.46
7082 7755 6.755141 GCGACAAATATTACAGTACAGAGGAA 59.245 38.462 0.00 0.00 0.00 3.36
7083 7756 6.096423 AGCGACAAATATTACAGTACAGAGGA 59.904 38.462 0.00 0.00 0.00 3.71
7084 7757 6.199154 CAGCGACAAATATTACAGTACAGAGG 59.801 42.308 0.00 0.00 0.00 3.69
7085 7758 6.199154 CCAGCGACAAATATTACAGTACAGAG 59.801 42.308 0.00 0.00 0.00 3.35
7086 7759 6.040247 CCAGCGACAAATATTACAGTACAGA 58.960 40.000 0.00 0.00 0.00 3.41
7087 7760 6.040247 TCCAGCGACAAATATTACAGTACAG 58.960 40.000 0.00 0.00 0.00 2.74
7088 7761 5.968254 TCCAGCGACAAATATTACAGTACA 58.032 37.500 0.00 0.00 0.00 2.90
7089 7762 5.050972 GCTCCAGCGACAAATATTACAGTAC 60.051 44.000 0.00 0.00 0.00 2.73
7090 7763 5.047847 GCTCCAGCGACAAATATTACAGTA 58.952 41.667 0.00 0.00 0.00 2.74
7091 7764 3.871594 GCTCCAGCGACAAATATTACAGT 59.128 43.478 0.00 0.00 0.00 3.55
7092 7765 3.871006 TGCTCCAGCGACAAATATTACAG 59.129 43.478 0.00 0.00 45.83 2.74
7093 7766 3.867857 TGCTCCAGCGACAAATATTACA 58.132 40.909 0.00 0.00 45.83 2.41
7094 7767 4.458951 CTGCTCCAGCGACAAATATTAC 57.541 45.455 0.00 0.00 45.83 1.89
7107 7780 1.747709 AGCAACAATAGCTGCTCCAG 58.252 50.000 4.91 0.00 43.35 3.86
7108 7781 3.963733 AGCAACAATAGCTGCTCCA 57.036 47.368 4.91 0.00 43.35 3.86
7144 7817 3.377172 ACCGTAATATTTGTTGCTGGAGC 59.623 43.478 0.00 0.00 42.50 4.70
7145 7818 5.583061 TGTACCGTAATATTTGTTGCTGGAG 59.417 40.000 0.00 0.00 0.00 3.86
7146 7819 5.489249 TGTACCGTAATATTTGTTGCTGGA 58.511 37.500 0.00 0.00 0.00 3.86
7147 7820 5.583061 TCTGTACCGTAATATTTGTTGCTGG 59.417 40.000 0.00 0.00 0.00 4.85
7148 7821 6.238103 CCTCTGTACCGTAATATTTGTTGCTG 60.238 42.308 0.00 0.00 0.00 4.41
7149 7822 5.815740 CCTCTGTACCGTAATATTTGTTGCT 59.184 40.000 0.00 0.00 0.00 3.91
7150 7823 5.007332 CCCTCTGTACCGTAATATTTGTTGC 59.993 44.000 0.00 0.00 0.00 4.17
7151 7824 6.342906 TCCCTCTGTACCGTAATATTTGTTG 58.657 40.000 0.00 0.00 0.00 3.33
7152 7825 6.155737 ACTCCCTCTGTACCGTAATATTTGTT 59.844 38.462 0.00 0.00 0.00 2.83
7153 7826 5.659971 ACTCCCTCTGTACCGTAATATTTGT 59.340 40.000 0.00 0.00 0.00 2.83
7154 7827 6.158023 ACTCCCTCTGTACCGTAATATTTG 57.842 41.667 0.00 0.00 0.00 2.32
7155 7828 7.065504 AGTACTCCCTCTGTACCGTAATATTT 58.934 38.462 0.00 0.00 40.61 1.40
7156 7829 6.608922 AGTACTCCCTCTGTACCGTAATATT 58.391 40.000 0.00 0.00 40.61 1.28
7157 7830 6.198237 AGTACTCCCTCTGTACCGTAATAT 57.802 41.667 0.00 0.00 40.61 1.28
7158 7831 5.636903 AGTACTCCCTCTGTACCGTAATA 57.363 43.478 0.00 0.00 40.61 0.98
7159 7832 4.516652 AGTACTCCCTCTGTACCGTAAT 57.483 45.455 0.00 0.00 40.61 1.89
7160 7833 4.680708 CGTAGTACTCCCTCTGTACCGTAA 60.681 50.000 0.00 0.00 40.61 3.18
7161 7834 3.181475 CGTAGTACTCCCTCTGTACCGTA 60.181 52.174 0.00 0.00 40.61 4.02
7162 7835 2.419297 CGTAGTACTCCCTCTGTACCGT 60.419 54.545 0.00 0.00 40.61 4.83
7163 7836 2.208431 CGTAGTACTCCCTCTGTACCG 58.792 57.143 0.00 0.00 40.61 4.02
7164 7837 2.171448 TCCGTAGTACTCCCTCTGTACC 59.829 54.545 0.00 0.00 40.61 3.34
7165 7838 3.465871 CTCCGTAGTACTCCCTCTGTAC 58.534 54.545 0.00 0.00 40.19 2.90
7166 7839 2.158842 GCTCCGTAGTACTCCCTCTGTA 60.159 54.545 0.00 0.00 0.00 2.74
7167 7840 1.408544 GCTCCGTAGTACTCCCTCTGT 60.409 57.143 0.00 0.00 0.00 3.41
7168 7841 1.310904 GCTCCGTAGTACTCCCTCTG 58.689 60.000 0.00 0.00 0.00 3.35
7169 7842 0.179051 CGCTCCGTAGTACTCCCTCT 60.179 60.000 0.00 0.00 0.00 3.69
7170 7843 1.165284 CCGCTCCGTAGTACTCCCTC 61.165 65.000 0.00 0.00 0.00 4.30
7171 7844 1.153005 CCGCTCCGTAGTACTCCCT 60.153 63.158 0.00 0.00 0.00 4.20
7172 7845 2.192187 CCCGCTCCGTAGTACTCCC 61.192 68.421 0.00 0.00 0.00 4.30
7173 7846 2.192187 CCCCGCTCCGTAGTACTCC 61.192 68.421 0.00 0.00 0.00 3.85
7174 7847 1.452833 ACCCCGCTCCGTAGTACTC 60.453 63.158 0.00 0.00 0.00 2.59
7175 7848 1.751927 CACCCCGCTCCGTAGTACT 60.752 63.158 0.00 0.00 0.00 2.73
7176 7849 1.750399 TCACCCCGCTCCGTAGTAC 60.750 63.158 0.00 0.00 0.00 2.73
7220 7893 2.435422 TGTCTGGTACATGTTGCATGG 58.565 47.619 2.30 0.00 38.20 3.66
7225 7898 3.629855 TGGTTGTTGTCTGGTACATGTTG 59.370 43.478 2.30 0.00 38.10 3.33
7291 7964 1.089481 ATGCCGGTCGTAACAGCATG 61.089 55.000 1.90 0.00 42.21 4.06
7292 7965 0.462375 TATGCCGGTCGTAACAGCAT 59.538 50.000 1.90 0.00 44.45 3.79
7293 7966 0.462375 ATATGCCGGTCGTAACAGCA 59.538 50.000 1.90 0.00 39.58 4.41
7294 7967 1.578583 AATATGCCGGTCGTAACAGC 58.421 50.000 1.90 0.00 0.00 4.40
7295 7968 3.243636 ACCTAATATGCCGGTCGTAACAG 60.244 47.826 1.90 3.41 0.00 3.16
7298 7971 2.036217 CCACCTAATATGCCGGTCGTAA 59.964 50.000 1.90 0.00 0.00 3.18
7299 7972 1.614903 CCACCTAATATGCCGGTCGTA 59.385 52.381 1.90 1.43 0.00 3.43
7300 7973 0.391597 CCACCTAATATGCCGGTCGT 59.608 55.000 1.90 0.00 0.00 4.34
7301 7974 0.320421 CCCACCTAATATGCCGGTCG 60.320 60.000 1.90 0.00 0.00 4.79
7302 7975 0.763035 ACCCACCTAATATGCCGGTC 59.237 55.000 1.90 0.00 0.00 4.79
7303 7976 1.133915 CAACCCACCTAATATGCCGGT 60.134 52.381 1.90 0.00 0.00 5.28
7304 7977 1.133915 ACAACCCACCTAATATGCCGG 60.134 52.381 0.00 0.00 0.00 6.13
7305 7978 1.946768 CACAACCCACCTAATATGCCG 59.053 52.381 0.00 0.00 0.00 5.69
7306 7979 2.306847 CCACAACCCACCTAATATGCC 58.693 52.381 0.00 0.00 0.00 4.40
7307 7980 2.949644 GACCACAACCCACCTAATATGC 59.050 50.000 0.00 0.00 0.00 3.14
7308 7981 3.053991 TGGACCACAACCCACCTAATATG 60.054 47.826 0.00 0.00 0.00 1.78
7309 7982 3.194620 TGGACCACAACCCACCTAATAT 58.805 45.455 0.00 0.00 0.00 1.28
7310 7983 2.633692 TGGACCACAACCCACCTAATA 58.366 47.619 0.00 0.00 0.00 0.98
7311 7984 1.451449 TGGACCACAACCCACCTAAT 58.549 50.000 0.00 0.00 0.00 1.73
7312 7985 1.223501 TTGGACCACAACCCACCTAA 58.776 50.000 0.00 0.00 33.18 2.69
7313 7986 1.223501 TTTGGACCACAACCCACCTA 58.776 50.000 0.00 0.00 39.19 3.08
7314 7987 0.560688 ATTTGGACCACAACCCACCT 59.439 50.000 0.00 0.00 39.19 4.00
7315 7988 1.419381 AATTTGGACCACAACCCACC 58.581 50.000 0.00 0.00 39.19 4.61
7316 7989 4.882842 AATAATTTGGACCACAACCCAC 57.117 40.909 0.00 0.00 39.19 4.61
7317 7990 5.896073 AAAATAATTTGGACCACAACCCA 57.104 34.783 0.00 0.00 39.19 4.51
7318 7991 7.880713 ACAATAAAATAATTTGGACCACAACCC 59.119 33.333 0.00 0.00 39.19 4.11
7319 7992 8.840833 ACAATAAAATAATTTGGACCACAACC 57.159 30.769 0.00 0.00 39.19 3.77
7372 8045 9.729281 CTTCTAAGTAAACAACCCTAATACCAA 57.271 33.333 0.00 0.00 0.00 3.67
7373 8046 8.883302 ACTTCTAAGTAAACAACCCTAATACCA 58.117 33.333 0.00 0.00 37.52 3.25
7374 8047 9.376075 GACTTCTAAGTAAACAACCCTAATACC 57.624 37.037 0.00 0.00 39.88 2.73
7375 8048 9.933723 TGACTTCTAAGTAAACAACCCTAATAC 57.066 33.333 0.00 0.00 39.88 1.89
7377 8050 9.503399 CTTGACTTCTAAGTAAACAACCCTAAT 57.497 33.333 0.00 0.00 39.88 1.73
7378 8051 8.488668 ACTTGACTTCTAAGTAAACAACCCTAA 58.511 33.333 0.00 0.00 39.88 2.69
7379 8052 8.026396 ACTTGACTTCTAAGTAAACAACCCTA 57.974 34.615 0.00 0.00 39.88 3.53
7380 8053 6.896883 ACTTGACTTCTAAGTAAACAACCCT 58.103 36.000 0.00 0.00 39.88 4.34
7381 8054 8.667076 TTACTTGACTTCTAAGTAAACAACCC 57.333 34.615 7.62 0.00 43.68 4.11
7388 8061 9.364653 AGAGAGGTTTACTTGACTTCTAAGTAA 57.635 33.333 6.31 6.31 44.46 2.24
7389 8062 8.937207 AGAGAGGTTTACTTGACTTCTAAGTA 57.063 34.615 0.00 0.00 39.88 2.24
7390 8063 7.842887 AGAGAGGTTTACTTGACTTCTAAGT 57.157 36.000 0.00 0.00 43.16 2.24
7435 8108 9.671279 TGATTGCTTCTTACTTGATTAGATTGA 57.329 29.630 0.00 0.00 0.00 2.57
7436 8109 9.932699 CTGATTGCTTCTTACTTGATTAGATTG 57.067 33.333 0.00 0.00 0.00 2.67
7437 8110 9.678260 ACTGATTGCTTCTTACTTGATTAGATT 57.322 29.630 0.00 0.00 0.00 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.