Multiple sequence alignment - TraesCS5D01G161800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5D01G161800 | chr5D | 100.000 | 8386 | 0 | 0 | 1 | 8386 | 252613277 | 252621662 | 0.000000e+00 | 15487.0 |
1 | TraesCS5D01G161800 | chr5D | 88.571 | 105 | 12 | 0 | 2403 | 2507 | 111788747 | 111788643 | 2.460000e-25 | 128.0 |
2 | TraesCS5D01G161800 | chr5A | 94.663 | 5940 | 207 | 49 | 2505 | 8386 | 335291456 | 335297343 | 0.000000e+00 | 9112.0 |
3 | TraesCS5D01G161800 | chr5A | 93.920 | 1842 | 69 | 21 | 606 | 2423 | 335289635 | 335291457 | 0.000000e+00 | 2741.0 |
4 | TraesCS5D01G161800 | chr5A | 79.138 | 580 | 63 | 21 | 1 | 555 | 335289063 | 335289609 | 1.730000e-91 | 348.0 |
5 | TraesCS5D01G161800 | chr5A | 100.000 | 31 | 0 | 0 | 2396 | 2426 | 77328767 | 77328797 | 3.270000e-04 | 58.4 |
6 | TraesCS5D01G161800 | chr5A | 100.000 | 28 | 0 | 0 | 2399 | 2426 | 196252125 | 196252098 | 1.500000e-02 | 52.8 |
7 | TraesCS5D01G161800 | chr5B | 95.833 | 2736 | 77 | 13 | 2526 | 5238 | 285037870 | 285040591 | 0.000000e+00 | 4386.0 |
8 | TraesCS5D01G161800 | chr5B | 93.965 | 2237 | 69 | 24 | 5212 | 7431 | 285040642 | 285042829 | 0.000000e+00 | 3323.0 |
9 | TraesCS5D01G161800 | chr5B | 90.953 | 2067 | 87 | 42 | 402 | 2423 | 285035840 | 285037851 | 0.000000e+00 | 2689.0 |
10 | TraesCS5D01G161800 | chr5B | 91.290 | 884 | 45 | 16 | 7516 | 8386 | 285042864 | 285043728 | 0.000000e+00 | 1177.0 |
11 | TraesCS5D01G161800 | chr5B | 95.098 | 408 | 18 | 1 | 1 | 408 | 285034524 | 285034929 | 7.100000e-180 | 641.0 |
12 | TraesCS5D01G161800 | chr5B | 90.152 | 132 | 11 | 2 | 2507 | 2637 | 243851142 | 243851012 | 4.020000e-38 | 171.0 |
13 | TraesCS5D01G161800 | chr5B | 94.382 | 89 | 5 | 0 | 2419 | 2507 | 296852665 | 296852577 | 4.080000e-28 | 137.0 |
14 | TraesCS5D01G161800 | chr1A | 91.777 | 377 | 26 | 4 | 3687 | 4063 | 7517886 | 7517515 | 3.470000e-143 | 520.0 |
15 | TraesCS5D01G161800 | chr1A | 91.111 | 135 | 11 | 1 | 2505 | 2638 | 395177582 | 395177448 | 1.860000e-41 | 182.0 |
16 | TraesCS5D01G161800 | chr1A | 91.111 | 135 | 9 | 3 | 2505 | 2638 | 98236430 | 98236298 | 6.690000e-41 | 180.0 |
17 | TraesCS5D01G161800 | chr1A | 91.129 | 124 | 9 | 2 | 4045 | 4168 | 7518771 | 7518650 | 5.210000e-37 | 167.0 |
18 | TraesCS5D01G161800 | chr7B | 82.663 | 398 | 48 | 18 | 5225 | 5611 | 712489926 | 712490313 | 4.850000e-87 | 333.0 |
19 | TraesCS5D01G161800 | chr6A | 82.368 | 397 | 49 | 15 | 5225 | 5611 | 602228077 | 602227692 | 8.120000e-85 | 326.0 |
20 | TraesCS5D01G161800 | chr6A | 91.667 | 84 | 6 | 1 | 4265 | 4347 | 197863389 | 197863306 | 1.910000e-21 | 115.0 |
21 | TraesCS5D01G161800 | chr7A | 81.699 | 306 | 35 | 13 | 4230 | 4532 | 38080937 | 38080650 | 1.410000e-57 | 235.0 |
22 | TraesCS5D01G161800 | chr3B | 82.418 | 273 | 28 | 6 | 4265 | 4532 | 397324900 | 397324643 | 3.940000e-53 | 220.0 |
23 | TraesCS5D01G161800 | chr7D | 91.447 | 152 | 6 | 4 | 3887 | 4033 | 563292011 | 563291862 | 1.430000e-47 | 202.0 |
24 | TraesCS5D01G161800 | chr7D | 94.262 | 122 | 7 | 0 | 4048 | 4169 | 563291815 | 563291694 | 4.000000e-43 | 187.0 |
25 | TraesCS5D01G161800 | chr7D | 89.630 | 135 | 13 | 1 | 2505 | 2638 | 197927141 | 197927007 | 4.020000e-38 | 171.0 |
26 | TraesCS5D01G161800 | chr7D | 95.402 | 87 | 4 | 0 | 2422 | 2508 | 520877093 | 520877007 | 1.140000e-28 | 139.0 |
27 | TraesCS5D01G161800 | chr1B | 91.111 | 135 | 11 | 1 | 2505 | 2638 | 130540301 | 130540167 | 1.860000e-41 | 182.0 |
28 | TraesCS5D01G161800 | chr4B | 89.437 | 142 | 14 | 1 | 2505 | 2645 | 78607598 | 78607457 | 2.410000e-40 | 178.0 |
29 | TraesCS5D01G161800 | chr4B | 89.552 | 134 | 13 | 1 | 2505 | 2637 | 106227428 | 106227561 | 1.450000e-37 | 169.0 |
30 | TraesCS5D01G161800 | chr2D | 93.407 | 91 | 6 | 0 | 2417 | 2507 | 217496902 | 217496992 | 1.470000e-27 | 135.0 |
31 | TraesCS5D01G161800 | chr2D | 94.318 | 88 | 5 | 0 | 2419 | 2506 | 341665947 | 341665860 | 1.470000e-27 | 135.0 |
32 | TraesCS5D01G161800 | chr1D | 91.753 | 97 | 5 | 3 | 2418 | 2513 | 291087509 | 291087415 | 1.900000e-26 | 132.0 |
33 | TraesCS5D01G161800 | chr1D | 90.816 | 98 | 8 | 1 | 2413 | 2509 | 463165269 | 463165366 | 6.830000e-26 | 130.0 |
34 | TraesCS5D01G161800 | chr6B | 88.679 | 106 | 12 | 0 | 2402 | 2507 | 290638553 | 290638448 | 6.830000e-26 | 130.0 |
35 | TraesCS5D01G161800 | chr6B | 88.679 | 106 | 12 | 0 | 2402 | 2507 | 290666392 | 290666287 | 6.830000e-26 | 130.0 |
36 | TraesCS5D01G161800 | chr2A | 90.476 | 84 | 7 | 1 | 4265 | 4347 | 381734484 | 381734401 | 8.900000e-20 | 110.0 |
37 | TraesCS5D01G161800 | chr2A | 90.476 | 84 | 7 | 1 | 4265 | 4347 | 381736573 | 381736490 | 8.900000e-20 | 110.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5D01G161800 | chr5D | 252613277 | 252621662 | 8385 | False | 15487.0 | 15487 | 100.000000 | 1 | 8386 | 1 | chr5D.!!$F1 | 8385 |
1 | TraesCS5D01G161800 | chr5A | 335289063 | 335297343 | 8280 | False | 4067.0 | 9112 | 89.240333 | 1 | 8386 | 3 | chr5A.!!$F2 | 8385 |
2 | TraesCS5D01G161800 | chr5B | 285034524 | 285043728 | 9204 | False | 2443.2 | 4386 | 93.427800 | 1 | 8386 | 5 | chr5B.!!$F1 | 8385 |
3 | TraesCS5D01G161800 | chr1A | 7517515 | 7518771 | 1256 | True | 343.5 | 520 | 91.453000 | 3687 | 4168 | 2 | chr1A.!!$R3 | 481 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
657 | 1616 | 1.021920 | GCGGAGAGGAAGGTTGCTTC | 61.022 | 60.000 | 0.00 | 0.0 | 0.00 | 3.86 | F |
1156 | 2136 | 0.108424 | GCGTGTGCTCATCCTCTTCT | 60.108 | 55.000 | 0.00 | 0.0 | 38.39 | 2.85 | F |
1409 | 2396 | 0.179134 | CTCAAGATCGACGGACCACC | 60.179 | 60.000 | 0.00 | 0.0 | 0.00 | 4.61 | F |
2094 | 3095 | 0.312729 | GAGCTAGCTTCCTCTACGGC | 59.687 | 60.000 | 20.42 | 0.0 | 0.00 | 5.68 | F |
3663 | 4675 | 1.151668 | CAGCACCCAGAGTTCTTTCG | 58.848 | 55.000 | 0.00 | 0.0 | 0.00 | 3.46 | F |
4345 | 5370 | 3.245229 | TGCACTTACTGATTCCCAACCAT | 60.245 | 43.478 | 0.00 | 0.0 | 0.00 | 3.55 | F |
5852 | 6961 | 0.031994 | CGGCAAAACTTTGTCTGGGG | 59.968 | 55.000 | 5.34 | 0.0 | 40.47 | 4.96 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1849 | 2850 | 0.877071 | AAGCTGATGAAACCTGCACG | 59.123 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 | R |
2094 | 3095 | 1.062002 | ACGTTGCTGTTGTCGAAGTTG | 59.938 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 | R |
2444 | 3445 | 1.602377 | GTGTAGTGCCAAAAACGCTCT | 59.398 | 47.619 | 0.00 | 0.00 | 34.63 | 4.09 | R |
4083 | 5106 | 1.135315 | CAAAGAGGATGGCAACGCG | 59.865 | 57.895 | 3.53 | 3.53 | 42.51 | 6.01 | R |
4666 | 5694 | 1.180029 | CACTTGGCCCCTGAAGATTG | 58.820 | 55.000 | 7.51 | 0.00 | 0.00 | 2.67 | R |
6081 | 7196 | 2.182030 | CGGTCCTCGGCTCAAGTC | 59.818 | 66.667 | 0.00 | 0.00 | 34.75 | 3.01 | R |
7534 | 8670 | 0.035439 | ATGAACATTCCTCGGCCGTT | 60.035 | 50.000 | 27.15 | 10.21 | 0.00 | 4.44 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
81 | 82 | 9.757227 | AGACTTATCTCTTAGATTATGCAACAC | 57.243 | 33.333 | 0.00 | 0.00 | 36.20 | 3.32 |
90 | 91 | 8.264347 | TCTTAGATTATGCAACACACATTCCTA | 58.736 | 33.333 | 0.00 | 0.00 | 0.00 | 2.94 |
102 | 105 | 5.637810 | ACACACATTCCTACAAATGTAGTCG | 59.362 | 40.000 | 16.97 | 5.46 | 45.68 | 4.18 |
143 | 146 | 6.072508 | TGTGCTCAAAAGAATAATGTGGAGAC | 60.073 | 38.462 | 0.00 | 0.00 | 0.00 | 3.36 |
221 | 242 | 8.710835 | AAACAATACAAAATCTCAAAAACGGT | 57.289 | 26.923 | 0.00 | 0.00 | 0.00 | 4.83 |
243 | 264 | 1.792757 | TTGCCAGCCTTCCCACATCT | 61.793 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
398 | 419 | 3.001330 | CCGTTCTCTCCAATTTGTATCGC | 59.999 | 47.826 | 0.00 | 0.00 | 0.00 | 4.58 |
404 | 1342 | 3.392947 | TCTCCAATTTGTATCGCCCCATA | 59.607 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
471 | 1409 | 7.345192 | CGGAAAGTAAAATAATCGACTCATGG | 58.655 | 38.462 | 0.00 | 0.00 | 0.00 | 3.66 |
473 | 1411 | 6.619801 | AAGTAAAATAATCGACTCATGGCC | 57.380 | 37.500 | 0.00 | 0.00 | 0.00 | 5.36 |
555 | 1498 | 3.510531 | TCGTCTGGTATGCCTCTAGAT | 57.489 | 47.619 | 0.16 | 0.00 | 35.27 | 1.98 |
557 | 1500 | 4.325119 | TCGTCTGGTATGCCTCTAGATAC | 58.675 | 47.826 | 0.16 | 0.00 | 35.27 | 2.24 |
567 | 1510 | 4.715713 | TGCCTCTAGATACGAGAAGCTAA | 58.284 | 43.478 | 0.00 | 0.00 | 32.56 | 3.09 |
568 | 1511 | 5.131067 | TGCCTCTAGATACGAGAAGCTAAA | 58.869 | 41.667 | 0.00 | 0.00 | 32.56 | 1.85 |
588 | 1545 | 9.000486 | AGCTAAATTATAAAACCGAGCCTAATC | 58.000 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
589 | 1546 | 8.235226 | GCTAAATTATAAAACCGAGCCTAATCC | 58.765 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
599 | 1556 | 1.847088 | GAGCCTAATCCCAACCCTCTT | 59.153 | 52.381 | 0.00 | 0.00 | 0.00 | 2.85 |
600 | 1557 | 3.046374 | GAGCCTAATCCCAACCCTCTTA | 58.954 | 50.000 | 0.00 | 0.00 | 0.00 | 2.10 |
601 | 1558 | 3.653352 | GAGCCTAATCCCAACCCTCTTAT | 59.347 | 47.826 | 0.00 | 0.00 | 0.00 | 1.73 |
602 | 1559 | 4.839589 | AGCCTAATCCCAACCCTCTTATA | 58.160 | 43.478 | 0.00 | 0.00 | 0.00 | 0.98 |
657 | 1616 | 1.021920 | GCGGAGAGGAAGGTTGCTTC | 61.022 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
669 | 1628 | 2.238395 | AGGTTGCTTCTGAGGGATTCTC | 59.762 | 50.000 | 0.00 | 0.00 | 42.74 | 2.87 |
874 | 1845 | 4.757149 | ACACAGTTCCAAGAGAATTAGTGC | 59.243 | 41.667 | 0.00 | 0.00 | 37.10 | 4.40 |
879 | 1850 | 1.407437 | CCAAGAGAATTAGTGCCGCCT | 60.407 | 52.381 | 0.00 | 0.00 | 0.00 | 5.52 |
1097 | 2071 | 1.883021 | GCCCCACTCCGTTGATTTG | 59.117 | 57.895 | 0.00 | 0.00 | 0.00 | 2.32 |
1100 | 2074 | 1.539827 | CCCCACTCCGTTGATTTGTTC | 59.460 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
1111 | 2085 | 1.146774 | TGATTTGTTCCTCCCCAGCAA | 59.853 | 47.619 | 0.00 | 0.00 | 0.00 | 3.91 |
1112 | 2086 | 2.247358 | GATTTGTTCCTCCCCAGCAAA | 58.753 | 47.619 | 0.00 | 0.00 | 34.25 | 3.68 |
1114 | 2088 | 1.703411 | TTGTTCCTCCCCAGCAAAAG | 58.297 | 50.000 | 0.00 | 0.00 | 0.00 | 2.27 |
1115 | 2089 | 0.178964 | TGTTCCTCCCCAGCAAAAGG | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.11 |
1116 | 2090 | 0.900182 | GTTCCTCCCCAGCAAAAGGG | 60.900 | 60.000 | 0.00 | 0.00 | 46.36 | 3.95 |
1134 | 2114 | 3.698250 | GGCACCAGCATACGGATTA | 57.302 | 52.632 | 0.00 | 0.00 | 44.61 | 1.75 |
1150 | 2130 | 0.810031 | ATTACGGCGTGTGCTCATCC | 60.810 | 55.000 | 24.86 | 0.00 | 42.25 | 3.51 |
1156 | 2136 | 0.108424 | GCGTGTGCTCATCCTCTTCT | 60.108 | 55.000 | 0.00 | 0.00 | 38.39 | 2.85 |
1159 | 2139 | 2.094286 | CGTGTGCTCATCCTCTTCTTCT | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
1167 | 2147 | 5.626578 | GCTCATCCTCTTCTTCTAGCTTTGT | 60.627 | 44.000 | 0.00 | 0.00 | 0.00 | 2.83 |
1169 | 2149 | 5.247110 | TCATCCTCTTCTTCTAGCTTTGTGT | 59.753 | 40.000 | 0.00 | 0.00 | 0.00 | 3.72 |
1190 | 2170 | 1.672356 | CGCTGTTCCCACTTCCCAG | 60.672 | 63.158 | 0.00 | 0.00 | 0.00 | 4.45 |
1195 | 2175 | 1.073319 | TTCCCACTTCCCAGACCCA | 60.073 | 57.895 | 0.00 | 0.00 | 0.00 | 4.51 |
1197 | 2177 | 2.606587 | CCCACTTCCCAGACCCAGG | 61.607 | 68.421 | 0.00 | 0.00 | 0.00 | 4.45 |
1199 | 2179 | 1.133809 | CCACTTCCCAGACCCAGGAA | 61.134 | 60.000 | 0.00 | 0.00 | 39.86 | 3.36 |
1201 | 2181 | 1.134438 | ACTTCCCAGACCCAGGAACC | 61.134 | 60.000 | 0.00 | 0.00 | 37.23 | 3.62 |
1202 | 2182 | 1.073319 | TTCCCAGACCCAGGAACCA | 60.073 | 57.895 | 0.00 | 0.00 | 37.23 | 3.67 |
1287 | 2269 | 4.664688 | AACAATGGAGTGAAGGAAGGAT | 57.335 | 40.909 | 0.00 | 0.00 | 0.00 | 3.24 |
1302 | 2284 | 1.290639 | GGATACTAGAGGCTGCCGC | 59.709 | 63.158 | 15.06 | 15.06 | 0.00 | 6.53 |
1331 | 2316 | 4.382541 | TCTCCTCCTGCGCCTGGA | 62.383 | 66.667 | 16.66 | 16.66 | 0.00 | 3.86 |
1406 | 2393 | 0.526524 | CTGCTCAAGATCGACGGACC | 60.527 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
1407 | 2394 | 1.248101 | TGCTCAAGATCGACGGACCA | 61.248 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1408 | 2395 | 0.802607 | GCTCAAGATCGACGGACCAC | 60.803 | 60.000 | 0.00 | 0.00 | 0.00 | 4.16 |
1409 | 2396 | 0.179134 | CTCAAGATCGACGGACCACC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
1448 | 2438 | 1.339535 | GGTTGCCTAGCTGCTTCTCTT | 60.340 | 52.381 | 7.79 | 0.00 | 0.00 | 2.85 |
1672 | 2669 | 2.859165 | TGCCGAAAGAGTCCAGATTT | 57.141 | 45.000 | 0.00 | 0.00 | 0.00 | 2.17 |
1681 | 2678 | 6.127591 | CGAAAGAGTCCAGATTTCTAAGGAGA | 60.128 | 42.308 | 0.00 | 0.00 | 32.08 | 3.71 |
1685 | 2682 | 7.563906 | AGAGTCCAGATTTCTAAGGAGATTTG | 58.436 | 38.462 | 0.00 | 0.00 | 0.00 | 2.32 |
1753 | 2753 | 3.499338 | TCATCTTCTTGGGCAACACATT | 58.501 | 40.909 | 0.00 | 0.00 | 39.74 | 2.71 |
1761 | 2761 | 4.955450 | TCTTGGGCAACACATTTATGCTAT | 59.045 | 37.500 | 0.00 | 0.00 | 39.94 | 2.97 |
1762 | 2762 | 6.125719 | TCTTGGGCAACACATTTATGCTATA | 58.874 | 36.000 | 0.00 | 0.00 | 39.94 | 1.31 |
1763 | 2763 | 5.766150 | TGGGCAACACATTTATGCTATAC | 57.234 | 39.130 | 0.00 | 0.00 | 39.94 | 1.47 |
1788 | 2788 | 8.915036 | ACTACTTGCTAAGTTATGTATGCTACT | 58.085 | 33.333 | 6.82 | 0.00 | 42.81 | 2.57 |
1819 | 2819 | 3.167485 | TCTAAGTTTAGGGGACGAGCAA | 58.833 | 45.455 | 0.00 | 0.00 | 0.00 | 3.91 |
1820 | 2820 | 2.943036 | AAGTTTAGGGGACGAGCAAA | 57.057 | 45.000 | 0.00 | 0.00 | 0.00 | 3.68 |
1821 | 2821 | 3.434940 | AAGTTTAGGGGACGAGCAAAT | 57.565 | 42.857 | 0.00 | 0.00 | 0.00 | 2.32 |
1822 | 2822 | 2.987232 | AGTTTAGGGGACGAGCAAATC | 58.013 | 47.619 | 0.00 | 0.00 | 0.00 | 2.17 |
1823 | 2823 | 2.014857 | GTTTAGGGGACGAGCAAATCC | 58.985 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
1986 | 2987 | 2.306847 | GTCCAAAACCAGCTCCAGAAA | 58.693 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
2021 | 3022 | 3.674997 | TGAGGTATTTTCCAGCAGACAC | 58.325 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
2094 | 3095 | 0.312729 | GAGCTAGCTTCCTCTACGGC | 59.687 | 60.000 | 20.42 | 0.00 | 0.00 | 5.68 |
2115 | 3116 | 2.212869 | ACTTCGACAACAGCAACGTA | 57.787 | 45.000 | 0.00 | 0.00 | 0.00 | 3.57 |
2139 | 3140 | 2.356535 | CCCCAAGTTTGATCTCTCCCTG | 60.357 | 54.545 | 0.00 | 0.00 | 0.00 | 4.45 |
2423 | 3424 | 6.002653 | ACTACTCCCTCCATTCCAAATTAC | 57.997 | 41.667 | 0.00 | 0.00 | 0.00 | 1.89 |
2424 | 3425 | 5.731678 | ACTACTCCCTCCATTCCAAATTACT | 59.268 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2425 | 3426 | 5.536497 | ACTCCCTCCATTCCAAATTACTT | 57.464 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
2426 | 3427 | 5.510430 | ACTCCCTCCATTCCAAATTACTTC | 58.490 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
2427 | 3428 | 4.867086 | TCCCTCCATTCCAAATTACTTCC | 58.133 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
2428 | 3429 | 4.544152 | TCCCTCCATTCCAAATTACTTCCT | 59.456 | 41.667 | 0.00 | 0.00 | 0.00 | 3.36 |
2429 | 3430 | 4.889995 | CCCTCCATTCCAAATTACTTCCTC | 59.110 | 45.833 | 0.00 | 0.00 | 0.00 | 3.71 |
2430 | 3431 | 4.889995 | CCTCCATTCCAAATTACTTCCTCC | 59.110 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
2431 | 3432 | 4.523083 | TCCATTCCAAATTACTTCCTCCG | 58.477 | 43.478 | 0.00 | 0.00 | 0.00 | 4.63 |
2432 | 3433 | 4.018779 | TCCATTCCAAATTACTTCCTCCGT | 60.019 | 41.667 | 0.00 | 0.00 | 0.00 | 4.69 |
2433 | 3434 | 4.335594 | CCATTCCAAATTACTTCCTCCGTC | 59.664 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
2434 | 3435 | 3.622166 | TCCAAATTACTTCCTCCGTCC | 57.378 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
2435 | 3436 | 2.237893 | TCCAAATTACTTCCTCCGTCCC | 59.762 | 50.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2436 | 3437 | 2.026636 | CCAAATTACTTCCTCCGTCCCA | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 4.37 |
2437 | 3438 | 3.371595 | CCAAATTACTTCCTCCGTCCCAT | 60.372 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
2438 | 3439 | 4.141574 | CCAAATTACTTCCTCCGTCCCATA | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 2.74 |
2439 | 3440 | 5.433526 | CAAATTACTTCCTCCGTCCCATAA | 58.566 | 41.667 | 0.00 | 0.00 | 0.00 | 1.90 |
2440 | 3441 | 5.906772 | AATTACTTCCTCCGTCCCATAAT | 57.093 | 39.130 | 0.00 | 0.00 | 0.00 | 1.28 |
2441 | 3442 | 7.221450 | CAAATTACTTCCTCCGTCCCATAATA | 58.779 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
2442 | 3443 | 7.569599 | AATTACTTCCTCCGTCCCATAATAT | 57.430 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
2443 | 3444 | 8.674925 | AATTACTTCCTCCGTCCCATAATATA | 57.325 | 34.615 | 0.00 | 0.00 | 0.00 | 0.86 |
2444 | 3445 | 8.674925 | ATTACTTCCTCCGTCCCATAATATAA | 57.325 | 34.615 | 0.00 | 0.00 | 0.00 | 0.98 |
2445 | 3446 | 6.607004 | ACTTCCTCCGTCCCATAATATAAG | 57.393 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
2446 | 3447 | 6.320518 | ACTTCCTCCGTCCCATAATATAAGA | 58.679 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
2447 | 3448 | 6.437793 | ACTTCCTCCGTCCCATAATATAAGAG | 59.562 | 42.308 | 0.00 | 0.00 | 0.00 | 2.85 |
2448 | 3449 | 4.710375 | TCCTCCGTCCCATAATATAAGAGC | 59.290 | 45.833 | 0.00 | 0.00 | 0.00 | 4.09 |
2449 | 3450 | 4.440250 | CCTCCGTCCCATAATATAAGAGCG | 60.440 | 50.000 | 0.00 | 0.00 | 0.00 | 5.03 |
2450 | 3451 | 4.084287 | TCCGTCCCATAATATAAGAGCGT | 58.916 | 43.478 | 0.00 | 0.00 | 0.00 | 5.07 |
2451 | 3452 | 4.525487 | TCCGTCCCATAATATAAGAGCGTT | 59.475 | 41.667 | 0.00 | 0.00 | 0.00 | 4.84 |
2452 | 3453 | 5.011329 | TCCGTCCCATAATATAAGAGCGTTT | 59.989 | 40.000 | 0.00 | 0.00 | 0.00 | 3.60 |
2453 | 3454 | 5.699458 | CCGTCCCATAATATAAGAGCGTTTT | 59.301 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2454 | 3455 | 6.204108 | CCGTCCCATAATATAAGAGCGTTTTT | 59.796 | 38.462 | 0.00 | 0.00 | 0.00 | 1.94 |
2455 | 3456 | 7.069569 | CGTCCCATAATATAAGAGCGTTTTTG | 58.930 | 38.462 | 0.00 | 0.00 | 0.00 | 2.44 |
2456 | 3457 | 7.360361 | GTCCCATAATATAAGAGCGTTTTTGG | 58.640 | 38.462 | 0.00 | 0.00 | 0.00 | 3.28 |
2457 | 3458 | 6.016610 | TCCCATAATATAAGAGCGTTTTTGGC | 60.017 | 38.462 | 0.00 | 0.00 | 0.00 | 4.52 |
2458 | 3459 | 6.238897 | CCCATAATATAAGAGCGTTTTTGGCA | 60.239 | 38.462 | 0.00 | 0.00 | 0.00 | 4.92 |
2459 | 3460 | 6.636850 | CCATAATATAAGAGCGTTTTTGGCAC | 59.363 | 38.462 | 0.00 | 0.00 | 0.00 | 5.01 |
2460 | 3461 | 5.897377 | AATATAAGAGCGTTTTTGGCACT | 57.103 | 34.783 | 0.00 | 0.00 | 32.60 | 4.40 |
2461 | 3462 | 6.995511 | AATATAAGAGCGTTTTTGGCACTA | 57.004 | 33.333 | 0.00 | 0.00 | 31.01 | 2.74 |
2462 | 3463 | 4.680171 | ATAAGAGCGTTTTTGGCACTAC | 57.320 | 40.909 | 0.00 | 0.00 | 31.01 | 2.73 |
2463 | 3464 | 1.961793 | AGAGCGTTTTTGGCACTACA | 58.038 | 45.000 | 0.00 | 0.00 | 29.39 | 2.74 |
2464 | 3465 | 1.602377 | AGAGCGTTTTTGGCACTACAC | 59.398 | 47.619 | 0.00 | 0.00 | 29.39 | 2.90 |
2465 | 3466 | 1.602377 | GAGCGTTTTTGGCACTACACT | 59.398 | 47.619 | 0.00 | 0.00 | 0.00 | 3.55 |
2466 | 3467 | 2.803956 | GAGCGTTTTTGGCACTACACTA | 59.196 | 45.455 | 0.00 | 0.00 | 0.00 | 2.74 |
2467 | 3468 | 2.806244 | AGCGTTTTTGGCACTACACTAG | 59.194 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
2468 | 3469 | 2.546789 | GCGTTTTTGGCACTACACTAGT | 59.453 | 45.455 | 0.00 | 0.00 | 40.28 | 2.57 |
2469 | 3470 | 3.742369 | GCGTTTTTGGCACTACACTAGTA | 59.258 | 43.478 | 0.00 | 0.00 | 37.23 | 1.82 |
2470 | 3471 | 4.376717 | GCGTTTTTGGCACTACACTAGTAC | 60.377 | 45.833 | 0.00 | 0.00 | 37.23 | 2.73 |
2471 | 3472 | 4.151157 | CGTTTTTGGCACTACACTAGTACC | 59.849 | 45.833 | 0.00 | 0.00 | 41.68 | 3.34 |
2475 | 3476 | 4.959560 | TGGCACTACACTAGTACCAAAA | 57.040 | 40.909 | 0.00 | 0.00 | 46.53 | 2.44 |
2476 | 3477 | 5.293319 | TGGCACTACACTAGTACCAAAAA | 57.707 | 39.130 | 0.00 | 0.00 | 46.53 | 1.94 |
2477 | 3478 | 5.058490 | TGGCACTACACTAGTACCAAAAAC | 58.942 | 41.667 | 0.00 | 0.00 | 46.53 | 2.43 |
2478 | 3479 | 4.151157 | GGCACTACACTAGTACCAAAAACG | 59.849 | 45.833 | 0.00 | 0.00 | 41.10 | 3.60 |
2479 | 3480 | 4.376717 | GCACTACACTAGTACCAAAAACGC | 60.377 | 45.833 | 0.00 | 0.00 | 37.23 | 4.84 |
2480 | 3481 | 4.986659 | CACTACACTAGTACCAAAAACGCT | 59.013 | 41.667 | 0.00 | 0.00 | 37.23 | 5.07 |
2481 | 3482 | 5.118203 | CACTACACTAGTACCAAAAACGCTC | 59.882 | 44.000 | 0.00 | 0.00 | 37.23 | 5.03 |
2482 | 3483 | 4.332428 | ACACTAGTACCAAAAACGCTCT | 57.668 | 40.909 | 0.00 | 0.00 | 0.00 | 4.09 |
2483 | 3484 | 4.700700 | ACACTAGTACCAAAAACGCTCTT | 58.299 | 39.130 | 0.00 | 0.00 | 0.00 | 2.85 |
2484 | 3485 | 5.846203 | ACACTAGTACCAAAAACGCTCTTA | 58.154 | 37.500 | 0.00 | 0.00 | 0.00 | 2.10 |
2485 | 3486 | 6.461640 | ACACTAGTACCAAAAACGCTCTTAT | 58.538 | 36.000 | 0.00 | 0.00 | 0.00 | 1.73 |
2486 | 3487 | 7.605449 | ACACTAGTACCAAAAACGCTCTTATA | 58.395 | 34.615 | 0.00 | 0.00 | 0.00 | 0.98 |
2487 | 3488 | 8.255905 | ACACTAGTACCAAAAACGCTCTTATAT | 58.744 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
2488 | 3489 | 9.095065 | CACTAGTACCAAAAACGCTCTTATATT | 57.905 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
2492 | 3493 | 9.052759 | AGTACCAAAAACGCTCTTATATTATGG | 57.947 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
2493 | 3494 | 7.272037 | ACCAAAAACGCTCTTATATTATGGG | 57.728 | 36.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2494 | 3495 | 7.057894 | ACCAAAAACGCTCTTATATTATGGGA | 58.942 | 34.615 | 0.00 | 0.00 | 0.00 | 4.37 |
2495 | 3496 | 7.012989 | ACCAAAAACGCTCTTATATTATGGGAC | 59.987 | 37.037 | 0.00 | 0.00 | 0.00 | 4.46 |
2496 | 3497 | 6.780706 | AAAACGCTCTTATATTATGGGACG | 57.219 | 37.500 | 0.00 | 0.00 | 0.00 | 4.79 |
2497 | 3498 | 4.451629 | ACGCTCTTATATTATGGGACGG | 57.548 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
2498 | 3499 | 4.084287 | ACGCTCTTATATTATGGGACGGA | 58.916 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
2499 | 3500 | 4.158025 | ACGCTCTTATATTATGGGACGGAG | 59.842 | 45.833 | 0.00 | 0.00 | 0.00 | 4.63 |
2517 | 3518 | 6.137794 | ACGGAGTGAGTATAAGATGTTCTG | 57.862 | 41.667 | 0.00 | 0.00 | 42.51 | 3.02 |
2653 | 3655 | 5.983720 | AGGTAGTACACGATATGAACATTGC | 59.016 | 40.000 | 2.06 | 0.00 | 0.00 | 3.56 |
2703 | 3714 | 6.946340 | TGTTCTTGCAATCTTCTGTCCTATA | 58.054 | 36.000 | 0.00 | 0.00 | 0.00 | 1.31 |
2773 | 3784 | 3.365472 | ACTGCCACAAAAAGTTCTTCCT | 58.635 | 40.909 | 0.00 | 0.00 | 0.00 | 3.36 |
3147 | 4158 | 3.084536 | TGGGCAGTCTCATATTTTGCA | 57.915 | 42.857 | 0.00 | 0.00 | 36.53 | 4.08 |
3440 | 4451 | 7.147312 | CACTTGTCCACATTGTTGTTATCATT | 58.853 | 34.615 | 0.00 | 0.00 | 32.34 | 2.57 |
3663 | 4675 | 1.151668 | CAGCACCCAGAGTTCTTTCG | 58.848 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
3671 | 4683 | 4.466370 | ACCCAGAGTTCTTTCGATGTATGA | 59.534 | 41.667 | 0.00 | 0.00 | 0.00 | 2.15 |
3838 | 4851 | 4.014406 | TGGTCGAGTTGTAAGCTCAGATA | 58.986 | 43.478 | 0.00 | 0.00 | 33.45 | 1.98 |
3856 | 4869 | 7.443302 | TCAGATAGTTCATTCTTTCCATCCT | 57.557 | 36.000 | 0.00 | 0.00 | 0.00 | 3.24 |
4083 | 5106 | 5.174943 | CCTTGAAAACAATCAGTTAAACGGC | 59.825 | 40.000 | 0.00 | 0.00 | 40.26 | 5.68 |
4183 | 5206 | 4.562767 | TGCACCCCTTACTATGGAGAATA | 58.437 | 43.478 | 0.00 | 0.00 | 0.00 | 1.75 |
4225 | 5248 | 3.576550 | AGACTGTCCTTCCTCTCTTTGTC | 59.423 | 47.826 | 3.76 | 0.00 | 0.00 | 3.18 |
4314 | 5339 | 9.604626 | CATTTGATCAAGAGTCTTTACAGAAAC | 57.395 | 33.333 | 8.41 | 0.00 | 0.00 | 2.78 |
4345 | 5370 | 3.245229 | TGCACTTACTGATTCCCAACCAT | 60.245 | 43.478 | 0.00 | 0.00 | 0.00 | 3.55 |
4463 | 5488 | 7.453393 | AGGCAGATGTAGCTAGCATATTTTAA | 58.547 | 34.615 | 18.83 | 0.00 | 0.00 | 1.52 |
4539 | 5564 | 7.448469 | AGCTTCACTTAACTTTGGTGACATATT | 59.552 | 33.333 | 0.00 | 0.00 | 42.32 | 1.28 |
4554 | 5579 | 8.319737 | TGGTGACATATTGTGGTAACATACGTC | 61.320 | 40.741 | 0.00 | 0.00 | 43.75 | 4.34 |
4607 | 5634 | 7.786030 | AGCGATAGTATTAGCCACAATGATAT | 58.214 | 34.615 | 7.62 | 0.00 | 39.35 | 1.63 |
4639 | 5667 | 9.807921 | TTTAGGATGTTCCTTCTGTTCTAATTT | 57.192 | 29.630 | 0.59 | 0.00 | 46.91 | 1.82 |
4666 | 5694 | 2.666190 | TGCAGCTCGTCAGGCAAC | 60.666 | 61.111 | 0.00 | 0.00 | 32.54 | 4.17 |
4879 | 5907 | 6.314400 | ACATGCAGTGATTTATTTTTGCCATC | 59.686 | 34.615 | 0.00 | 0.00 | 0.00 | 3.51 |
5022 | 6050 | 2.123077 | AGGAGGATCGGCTCTGGG | 60.123 | 66.667 | 0.00 | 0.00 | 34.37 | 4.45 |
5223 | 6251 | 4.377431 | CCGTTGAAGAGATAAACACAGCAC | 60.377 | 45.833 | 0.00 | 0.00 | 0.00 | 4.40 |
5400 | 6506 | 7.275888 | AGTCTTAGCTTAGATCAGTCAGATG | 57.724 | 40.000 | 5.61 | 0.00 | 37.00 | 2.90 |
5432 | 6538 | 5.705441 | TCTCTATGTTTCTGCAATTTCGGTT | 59.295 | 36.000 | 0.00 | 0.00 | 0.00 | 4.44 |
5582 | 6689 | 3.827876 | TGCTCATGCATTTCTTTCTTCCA | 59.172 | 39.130 | 0.00 | 0.00 | 45.31 | 3.53 |
5584 | 6691 | 4.157289 | GCTCATGCATTTCTTTCTTCCAGA | 59.843 | 41.667 | 0.00 | 0.00 | 39.41 | 3.86 |
5585 | 6692 | 5.163540 | GCTCATGCATTTCTTTCTTCCAGAT | 60.164 | 40.000 | 0.00 | 0.00 | 39.41 | 2.90 |
5586 | 6693 | 6.203808 | TCATGCATTTCTTTCTTCCAGATG | 57.796 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
5787 | 6896 | 7.512992 | TGATGTTAATTTTGTTTGGTGGGATT | 58.487 | 30.769 | 0.00 | 0.00 | 0.00 | 3.01 |
5794 | 6903 | 2.950781 | TGTTTGGTGGGATTAACAGCA | 58.049 | 42.857 | 0.00 | 0.00 | 43.73 | 4.41 |
5795 | 6904 | 3.505386 | TGTTTGGTGGGATTAACAGCAT | 58.495 | 40.909 | 0.00 | 0.00 | 44.63 | 3.79 |
5796 | 6905 | 4.667573 | TGTTTGGTGGGATTAACAGCATA | 58.332 | 39.130 | 0.00 | 0.00 | 44.63 | 3.14 |
5797 | 6906 | 4.461081 | TGTTTGGTGGGATTAACAGCATAC | 59.539 | 41.667 | 9.95 | 9.95 | 44.63 | 2.39 |
5798 | 6907 | 4.584638 | TTGGTGGGATTAACAGCATACT | 57.415 | 40.909 | 0.00 | 0.00 | 44.63 | 2.12 |
5852 | 6961 | 0.031994 | CGGCAAAACTTTGTCTGGGG | 59.968 | 55.000 | 5.34 | 0.00 | 40.47 | 4.96 |
5899 | 7008 | 4.821805 | ACATGTTTAGTTGGTTGACCTCAG | 59.178 | 41.667 | 0.00 | 0.00 | 36.82 | 3.35 |
6009 | 7118 | 2.749776 | CCCTTAAACCAAAAGTTGCCG | 58.250 | 47.619 | 0.00 | 0.00 | 39.19 | 5.69 |
6081 | 7196 | 8.783833 | TCTGAATTTTGAGGTCTATTCTTCAG | 57.216 | 34.615 | 0.00 | 0.00 | 38.78 | 3.02 |
6432 | 7549 | 8.850156 | AGTAGCAACATTTTACTTGACAAGAAT | 58.150 | 29.630 | 21.95 | 8.32 | 0.00 | 2.40 |
6594 | 7711 | 5.304101 | TCTTTGCCATGGTTTAGTGATTTGT | 59.696 | 36.000 | 14.67 | 0.00 | 0.00 | 2.83 |
6628 | 7745 | 4.667573 | TCCTGGTAGCATCTGAGGTATAG | 58.332 | 47.826 | 0.00 | 0.00 | 0.00 | 1.31 |
6634 | 7751 | 6.382859 | TGGTAGCATCTGAGGTATAGTTTTCA | 59.617 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
6683 | 7803 | 1.577736 | ACATCTCCCAGCAGCTAACT | 58.422 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
6758 | 7878 | 1.003331 | CACGAGCCGATCTCTAGTGAC | 60.003 | 57.143 | 15.11 | 0.00 | 39.70 | 3.67 |
6805 | 7925 | 1.206132 | TGTGGCGTGGGTAAGTATCTG | 59.794 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
6929 | 8049 | 3.429085 | GAACATTGACGCCATCATTGAC | 58.571 | 45.455 | 12.19 | 5.02 | 39.91 | 3.18 |
7055 | 8175 | 2.626840 | GTGCTCAAAGAGATCCAGGAC | 58.373 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
7158 | 8278 | 1.134220 | ACACCGACAACAGTGTGGATT | 60.134 | 47.619 | 4.15 | 0.00 | 45.24 | 3.01 |
7169 | 8289 | 3.087031 | CAGTGTGGATTTGGAGCAGAAT | 58.913 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
7199 | 8319 | 2.025156 | GAAATGCTCATGCGGCCG | 59.975 | 61.111 | 24.05 | 24.05 | 43.34 | 6.13 |
7259 | 8383 | 1.903183 | GTGTAAGCAAGGAGGAGAGGT | 59.097 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
7280 | 8404 | 5.705905 | AGGTTCATGTGTTAGTTAGGCTTTC | 59.294 | 40.000 | 0.00 | 0.00 | 0.00 | 2.62 |
7281 | 8405 | 5.705905 | GGTTCATGTGTTAGTTAGGCTTTCT | 59.294 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
7282 | 8406 | 6.348540 | GGTTCATGTGTTAGTTAGGCTTTCTG | 60.349 | 42.308 | 0.00 | 0.00 | 0.00 | 3.02 |
7286 | 8410 | 6.371809 | TGTGTTAGTTAGGCTTTCTGTTTG | 57.628 | 37.500 | 0.00 | 0.00 | 0.00 | 2.93 |
7295 | 8419 | 3.897505 | AGGCTTTCTGTTTGCTGGTAATT | 59.102 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
7321 | 8445 | 4.910195 | TGAAAGCTGTGGATGACATTAGT | 58.090 | 39.130 | 0.00 | 0.00 | 32.74 | 2.24 |
7324 | 8448 | 6.939730 | TGAAAGCTGTGGATGACATTAGTTTA | 59.060 | 34.615 | 0.00 | 0.00 | 32.74 | 2.01 |
7325 | 8449 | 6.992063 | AAGCTGTGGATGACATTAGTTTAG | 57.008 | 37.500 | 0.00 | 0.00 | 32.74 | 1.85 |
7326 | 8450 | 4.878397 | AGCTGTGGATGACATTAGTTTAGC | 59.122 | 41.667 | 0.00 | 0.00 | 32.74 | 3.09 |
7327 | 8451 | 4.878397 | GCTGTGGATGACATTAGTTTAGCT | 59.122 | 41.667 | 0.00 | 0.00 | 32.74 | 3.32 |
7329 | 8453 | 6.676456 | GCTGTGGATGACATTAGTTTAGCTTG | 60.676 | 42.308 | 0.00 | 0.00 | 32.74 | 4.01 |
7331 | 8455 | 5.880332 | GTGGATGACATTAGTTTAGCTTGGA | 59.120 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
7340 | 8464 | 8.565416 | ACATTAGTTTAGCTTGGAAGTACAAAC | 58.435 | 33.333 | 0.00 | 0.00 | 0.00 | 2.93 |
7362 | 8486 | 4.524328 | ACTGGGAATTTGATGGTGAAAGAC | 59.476 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
7386 | 8510 | 5.441500 | TGGTGATCTGGAACTGTTGTTTTA | 58.558 | 37.500 | 0.00 | 0.00 | 36.39 | 1.52 |
7387 | 8511 | 6.068010 | TGGTGATCTGGAACTGTTGTTTTAT | 58.932 | 36.000 | 0.00 | 0.00 | 36.39 | 1.40 |
7393 | 8517 | 9.313118 | GATCTGGAACTGTTGTTTTATTTGTTT | 57.687 | 29.630 | 0.00 | 0.00 | 36.39 | 2.83 |
7404 | 8528 | 9.049974 | GTTGTTTTATTTGTTTTTGTGCTTCAG | 57.950 | 29.630 | 0.00 | 0.00 | 0.00 | 3.02 |
7412 | 8536 | 5.108517 | TGTTTTTGTGCTTCAGATTGGTTC | 58.891 | 37.500 | 0.00 | 0.00 | 0.00 | 3.62 |
7419 | 8543 | 3.960102 | TGCTTCAGATTGGTTCCAAACTT | 59.040 | 39.130 | 10.84 | 0.00 | 28.78 | 2.66 |
7423 | 8547 | 6.983890 | GCTTCAGATTGGTTCCAAACTTTTAA | 59.016 | 34.615 | 10.84 | 6.36 | 28.78 | 1.52 |
7431 | 8555 | 7.038154 | TGGTTCCAAACTTTTAAGATGTCAG | 57.962 | 36.000 | 0.00 | 0.00 | 0.00 | 3.51 |
7432 | 8556 | 6.040391 | TGGTTCCAAACTTTTAAGATGTCAGG | 59.960 | 38.462 | 0.00 | 0.00 | 0.00 | 3.86 |
7433 | 8557 | 6.040504 | GGTTCCAAACTTTTAAGATGTCAGGT | 59.959 | 38.462 | 0.00 | 0.00 | 0.00 | 4.00 |
7437 | 8573 | 3.421844 | ACTTTTAAGATGTCAGGTGGGC | 58.578 | 45.455 | 0.00 | 0.00 | 0.00 | 5.36 |
7465 | 8601 | 3.066760 | GGAGATGGGGCAAATAGAAAACG | 59.933 | 47.826 | 0.00 | 0.00 | 0.00 | 3.60 |
7466 | 8602 | 3.694566 | GAGATGGGGCAAATAGAAAACGT | 59.305 | 43.478 | 0.00 | 0.00 | 0.00 | 3.99 |
7472 | 8608 | 3.252458 | GGGCAAATAGAAAACGTGACAGT | 59.748 | 43.478 | 0.00 | 0.00 | 0.00 | 3.55 |
7476 | 8612 | 6.021596 | GCAAATAGAAAACGTGACAGTATGG | 58.978 | 40.000 | 0.00 | 0.00 | 43.62 | 2.74 |
7486 | 8622 | 1.145945 | TGACAGTATGGGGGTTTGCAA | 59.854 | 47.619 | 0.00 | 0.00 | 43.62 | 4.08 |
7512 | 8648 | 3.698029 | ATCACACGCCAAATAAGATGC | 57.302 | 42.857 | 0.00 | 0.00 | 0.00 | 3.91 |
7514 | 8650 | 2.419673 | TCACACGCCAAATAAGATGCAG | 59.580 | 45.455 | 0.00 | 0.00 | 0.00 | 4.41 |
7519 | 8655 | 1.537562 | GCCAAATAAGATGCAGCTGCC | 60.538 | 52.381 | 34.64 | 20.80 | 41.18 | 4.85 |
7534 | 8670 | 3.316029 | CAGCTGCCGGATTCAATTTCATA | 59.684 | 43.478 | 5.05 | 0.00 | 0.00 | 2.15 |
7540 | 8676 | 3.550030 | CCGGATTCAATTTCATAACGGCC | 60.550 | 47.826 | 0.00 | 0.00 | 31.93 | 6.13 |
7567 | 8703 | 8.103948 | AGGAATGTTCATCTCAAAACTAACAG | 57.896 | 34.615 | 0.00 | 0.00 | 31.09 | 3.16 |
7569 | 8705 | 8.567948 | GGAATGTTCATCTCAAAACTAACAGAA | 58.432 | 33.333 | 0.00 | 0.00 | 31.09 | 3.02 |
7573 | 8709 | 6.861065 | TCATCTCAAAACTAACAGAACCAC | 57.139 | 37.500 | 0.00 | 0.00 | 0.00 | 4.16 |
7577 | 8713 | 4.761975 | TCAAAACTAACAGAACCACGTCT | 58.238 | 39.130 | 0.00 | 0.00 | 0.00 | 4.18 |
7579 | 8715 | 4.395959 | AAACTAACAGAACCACGTCTGA | 57.604 | 40.909 | 8.80 | 0.00 | 46.76 | 3.27 |
7581 | 8717 | 4.175787 | ACTAACAGAACCACGTCTGATC | 57.824 | 45.455 | 8.80 | 0.00 | 46.76 | 2.92 |
7582 | 8718 | 3.572682 | ACTAACAGAACCACGTCTGATCA | 59.427 | 43.478 | 8.80 | 0.00 | 46.76 | 2.92 |
7583 | 8719 | 3.469008 | AACAGAACCACGTCTGATCAA | 57.531 | 42.857 | 8.80 | 0.00 | 46.76 | 2.57 |
7584 | 8720 | 3.685139 | ACAGAACCACGTCTGATCAAT | 57.315 | 42.857 | 8.80 | 0.00 | 46.76 | 2.57 |
7585 | 8721 | 3.589988 | ACAGAACCACGTCTGATCAATC | 58.410 | 45.455 | 8.80 | 0.00 | 46.76 | 2.67 |
7586 | 8722 | 2.600420 | CAGAACCACGTCTGATCAATCG | 59.400 | 50.000 | 14.75 | 14.75 | 46.76 | 3.34 |
7587 | 8723 | 2.231478 | AGAACCACGTCTGATCAATCGT | 59.769 | 45.455 | 15.81 | 15.81 | 36.99 | 3.73 |
7588 | 8724 | 2.743636 | ACCACGTCTGATCAATCGTT | 57.256 | 45.000 | 18.01 | 6.46 | 34.30 | 3.85 |
7589 | 8725 | 3.861276 | ACCACGTCTGATCAATCGTTA | 57.139 | 42.857 | 18.01 | 0.00 | 34.30 | 3.18 |
7590 | 8726 | 4.386867 | ACCACGTCTGATCAATCGTTAT | 57.613 | 40.909 | 18.01 | 9.47 | 34.30 | 1.89 |
7591 | 8727 | 4.360563 | ACCACGTCTGATCAATCGTTATC | 58.639 | 43.478 | 18.01 | 0.00 | 34.30 | 1.75 |
7592 | 8728 | 4.142249 | ACCACGTCTGATCAATCGTTATCA | 60.142 | 41.667 | 18.01 | 0.00 | 34.30 | 2.15 |
7628 | 8765 | 6.005583 | TGATACAAAAGCTTGCTTGAGAAG | 57.994 | 37.500 | 16.01 | 0.93 | 35.84 | 2.85 |
7630 | 8767 | 4.564940 | ACAAAAGCTTGCTTGAGAAGAG | 57.435 | 40.909 | 16.01 | 0.00 | 35.84 | 2.85 |
7638 | 8775 | 3.319137 | TGCTTGAGAAGAGCACGTAAT | 57.681 | 42.857 | 0.00 | 0.00 | 44.63 | 1.89 |
7654 | 8791 | 6.309737 | AGCACGTAATAGCTAGTAACAAACAC | 59.690 | 38.462 | 1.83 | 0.00 | 39.78 | 3.32 |
7674 | 8812 | 8.716909 | CAAACACCAAATGTAGTCAAAAACTTT | 58.283 | 29.630 | 0.00 | 0.00 | 42.31 | 2.66 |
7682 | 8820 | 9.788960 | AAATGTAGTCAAAAACTTTCTTCAGTC | 57.211 | 29.630 | 0.00 | 0.00 | 39.55 | 3.51 |
7686 | 8824 | 7.687941 | AGTCAAAAACTTTCTTCAGTCTGAA | 57.312 | 32.000 | 14.54 | 14.54 | 33.03 | 3.02 |
7707 | 8845 | 4.734398 | AGCCAAACAATTGTCAGTTGAA | 57.266 | 36.364 | 18.72 | 0.00 | 34.60 | 2.69 |
7736 | 8874 | 6.751157 | AGATGATTGTCACATTTGCTTTCAA | 58.249 | 32.000 | 0.00 | 0.00 | 0.00 | 2.69 |
7744 | 8882 | 6.128336 | TGTCACATTTGCTTTCAAGTTTTTGG | 60.128 | 34.615 | 0.00 | 0.00 | 34.97 | 3.28 |
7837 | 8978 | 4.950475 | TCATGTACAAAGGAGTCTCTCGAT | 59.050 | 41.667 | 0.00 | 0.00 | 0.00 | 3.59 |
7870 | 9011 | 6.205784 | GCAAGAAAACATTTACACAGCTACA | 58.794 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
7887 | 9028 | 4.572389 | AGCTACAATGGCGAAATAGAACAG | 59.428 | 41.667 | 0.00 | 0.00 | 34.52 | 3.16 |
7896 | 9039 | 4.270325 | GGCGAAATAGAACAGACGCTAAAT | 59.730 | 41.667 | 0.00 | 0.00 | 44.31 | 1.40 |
7947 | 9090 | 3.118223 | TCGCACCCAAACCATATGTATCA | 60.118 | 43.478 | 1.24 | 0.00 | 0.00 | 2.15 |
8014 | 9161 | 2.309755 | AGGATCCTGATGACCAAGCAAA | 59.690 | 45.455 | 15.29 | 0.00 | 0.00 | 3.68 |
8022 | 9169 | 3.318839 | TGATGACCAAGCAAAGGAACAAG | 59.681 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
8028 | 9176 | 1.372128 | GCAAAGGAACAAGCAGCGG | 60.372 | 57.895 | 0.00 | 0.00 | 0.00 | 5.52 |
8056 | 9204 | 3.142838 | GCCGGCACATCCAGCAAT | 61.143 | 61.111 | 24.80 | 0.00 | 38.17 | 3.56 |
8059 | 9207 | 1.430632 | CGGCACATCCAGCAATGTC | 59.569 | 57.895 | 0.00 | 0.00 | 37.78 | 3.06 |
8068 | 9216 | 1.133823 | TCCAGCAATGTCCACAACACT | 60.134 | 47.619 | 0.00 | 0.00 | 41.75 | 3.55 |
8080 | 9228 | 3.376859 | TCCACAACACTACACAAAGCAAG | 59.623 | 43.478 | 0.00 | 0.00 | 0.00 | 4.01 |
8105 | 9253 | 8.960591 | AGATTATAATCACACAAGGACAAAAGG | 58.039 | 33.333 | 24.00 | 0.00 | 37.89 | 3.11 |
8108 | 9256 | 1.566703 | TCACACAAGGACAAAAGGGGA | 59.433 | 47.619 | 0.00 | 0.00 | 0.00 | 4.81 |
8109 | 9257 | 1.681264 | CACACAAGGACAAAAGGGGAC | 59.319 | 52.381 | 0.00 | 0.00 | 0.00 | 4.46 |
8118 | 9266 | 0.380378 | CAAAAGGGGACACACACACG | 59.620 | 55.000 | 0.00 | 0.00 | 0.00 | 4.49 |
8119 | 9267 | 0.034863 | AAAAGGGGACACACACACGT | 60.035 | 50.000 | 0.00 | 0.00 | 0.00 | 4.49 |
8120 | 9268 | 0.831966 | AAAGGGGACACACACACGTA | 59.168 | 50.000 | 0.00 | 0.00 | 0.00 | 3.57 |
8132 | 9280 | 9.251792 | GGACACACACACGTATATATCAAATTA | 57.748 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
8199 | 9347 | 3.069586 | AGTTCAAACTCAGGATCGTGTCA | 59.930 | 43.478 | 14.67 | 0.00 | 32.86 | 3.58 |
8377 | 9525 | 7.981102 | AAAGTCCAAAGGTTCTGTTATACTC | 57.019 | 36.000 | 0.00 | 0.00 | 0.00 | 2.59 |
8380 | 9528 | 7.690256 | AGTCCAAAGGTTCTGTTATACTCATT | 58.310 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
8381 | 9529 | 8.164070 | AGTCCAAAGGTTCTGTTATACTCATTT | 58.836 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
8382 | 9530 | 8.237267 | GTCCAAAGGTTCTGTTATACTCATTTG | 58.763 | 37.037 | 0.00 | 0.00 | 0.00 | 2.32 |
8383 | 9531 | 8.160765 | TCCAAAGGTTCTGTTATACTCATTTGA | 58.839 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
8384 | 9532 | 8.792633 | CCAAAGGTTCTGTTATACTCATTTGAA | 58.207 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
8385 | 9533 | 9.612620 | CAAAGGTTCTGTTATACTCATTTGAAC | 57.387 | 33.333 | 0.00 | 0.00 | 33.87 | 3.18 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
221 | 242 | 0.689080 | TGTGGGAAGGCTGGCAAAAA | 60.689 | 50.000 | 3.38 | 0.00 | 0.00 | 1.94 |
243 | 264 | 4.740634 | GCACGAAAGAGGATGATACATGGA | 60.741 | 45.833 | 0.00 | 0.00 | 0.00 | 3.41 |
494 | 1432 | 6.970484 | TGCCTTTTCTCTCAATACACTTTTC | 58.030 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
540 | 1483 | 4.635699 | TCTCGTATCTAGAGGCATACCA | 57.364 | 45.455 | 0.00 | 0.00 | 39.06 | 3.25 |
555 | 1498 | 9.241317 | CTCGGTTTTATAATTTAGCTTCTCGTA | 57.759 | 33.333 | 0.00 | 0.00 | 0.00 | 3.43 |
557 | 1500 | 7.064064 | GCTCGGTTTTATAATTTAGCTTCTCG | 58.936 | 38.462 | 0.00 | 0.00 | 0.00 | 4.04 |
567 | 1510 | 6.607019 | TGGGATTAGGCTCGGTTTTATAATT | 58.393 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
568 | 1511 | 6.195600 | TGGGATTAGGCTCGGTTTTATAAT | 57.804 | 37.500 | 0.00 | 0.00 | 0.00 | 1.28 |
588 | 1545 | 5.505181 | AGTGCATATATAAGAGGGTTGGG | 57.495 | 43.478 | 0.00 | 0.00 | 0.00 | 4.12 |
589 | 1546 | 6.540189 | GCATAGTGCATATATAAGAGGGTTGG | 59.460 | 42.308 | 0.00 | 0.00 | 44.26 | 3.77 |
640 | 1597 | 1.625818 | TCAGAAGCAACCTTCCTCTCC | 59.374 | 52.381 | 0.17 | 0.00 | 46.97 | 3.71 |
657 | 1616 | 3.522553 | GTTAACCACGAGAATCCCTCAG | 58.477 | 50.000 | 0.00 | 0.00 | 42.06 | 3.35 |
777 | 1748 | 3.094572 | TGTGGTAGTAGCTAGGGTGTTC | 58.905 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
807 | 1778 | 2.081787 | TGGCCCTTCTTGTGGTGGA | 61.082 | 57.895 | 0.00 | 0.00 | 0.00 | 4.02 |
874 | 1845 | 0.243636 | CAAAGCAAAAGGGTAGGCGG | 59.756 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
917 | 1888 | 3.120086 | AAAGGTGCGGCTGACAGGT | 62.120 | 57.895 | 4.26 | 0.00 | 0.00 | 4.00 |
920 | 1891 | 1.301716 | GAGAAAGGTGCGGCTGACA | 60.302 | 57.895 | 0.00 | 0.00 | 0.00 | 3.58 |
1045 | 2016 | 5.689383 | TCAAAAATCGACAAAAGGAGGAG | 57.311 | 39.130 | 0.00 | 0.00 | 0.00 | 3.69 |
1097 | 2071 | 0.900182 | CCCTTTTGCTGGGGAGGAAC | 60.900 | 60.000 | 0.00 | 0.00 | 45.18 | 3.62 |
1111 | 2085 | 1.378514 | CGTATGCTGGTGCCCCTTT | 60.379 | 57.895 | 0.00 | 0.00 | 38.71 | 3.11 |
1112 | 2086 | 2.272146 | CGTATGCTGGTGCCCCTT | 59.728 | 61.111 | 0.00 | 0.00 | 38.71 | 3.95 |
1114 | 2088 | 2.624674 | AATCCGTATGCTGGTGCCCC | 62.625 | 60.000 | 0.00 | 0.00 | 38.71 | 5.80 |
1115 | 2089 | 0.107831 | TAATCCGTATGCTGGTGCCC | 59.892 | 55.000 | 0.00 | 0.00 | 38.71 | 5.36 |
1116 | 2090 | 1.226746 | GTAATCCGTATGCTGGTGCC | 58.773 | 55.000 | 0.00 | 0.00 | 38.71 | 5.01 |
1120 | 2100 | 1.282248 | CGCCGTAATCCGTATGCTGG | 61.282 | 60.000 | 0.00 | 0.00 | 33.66 | 4.85 |
1125 | 2105 | 0.872881 | GCACACGCCGTAATCCGTAT | 60.873 | 55.000 | 0.00 | 0.00 | 35.69 | 3.06 |
1134 | 2114 | 3.649277 | GAGGATGAGCACACGCCGT | 62.649 | 63.158 | 0.00 | 0.00 | 39.83 | 5.68 |
1150 | 2130 | 4.376819 | CGCAACACAAAGCTAGAAGAAGAG | 60.377 | 45.833 | 0.00 | 0.00 | 0.00 | 2.85 |
1156 | 2136 | 1.264020 | CAGCGCAACACAAAGCTAGAA | 59.736 | 47.619 | 11.47 | 0.00 | 37.94 | 2.10 |
1159 | 2139 | 1.002900 | GAACAGCGCAACACAAAGCTA | 60.003 | 47.619 | 11.47 | 0.00 | 37.94 | 3.32 |
1167 | 2147 | 1.444119 | GAAGTGGGAACAGCGCAACA | 61.444 | 55.000 | 11.47 | 0.00 | 44.46 | 3.33 |
1169 | 2149 | 1.896660 | GGAAGTGGGAACAGCGCAA | 60.897 | 57.895 | 11.47 | 0.00 | 44.46 | 4.85 |
1190 | 2170 | 1.268283 | CCTCCTCTGGTTCCTGGGTC | 61.268 | 65.000 | 0.00 | 0.00 | 0.00 | 4.46 |
1195 | 2175 | 1.306568 | GGCTCCTCCTCTGGTTCCT | 60.307 | 63.158 | 0.00 | 0.00 | 0.00 | 3.36 |
1197 | 2177 | 2.896443 | CGGCTCCTCCTCTGGTTC | 59.104 | 66.667 | 0.00 | 0.00 | 0.00 | 3.62 |
1201 | 2181 | 4.154347 | GTGGCGGCTCCTCCTCTG | 62.154 | 72.222 | 11.43 | 0.00 | 35.26 | 3.35 |
1202 | 2182 | 4.704103 | TGTGGCGGCTCCTCCTCT | 62.704 | 66.667 | 11.43 | 0.00 | 35.26 | 3.69 |
1217 | 2199 | 1.075659 | GGGGAAAGGCTCTGCTTGT | 59.924 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
1287 | 2269 | 1.379977 | ACAGCGGCAGCCTCTAGTA | 60.380 | 57.895 | 10.54 | 0.00 | 46.67 | 1.82 |
1290 | 2272 | 4.457496 | GCACAGCGGCAGCCTCTA | 62.457 | 66.667 | 10.54 | 0.00 | 46.67 | 2.43 |
1302 | 2284 | 1.042559 | GGAGGAGAGGAGGAGCACAG | 61.043 | 65.000 | 0.00 | 0.00 | 0.00 | 3.66 |
1331 | 2316 | 0.760945 | GGACGGATCCTCATCCCAGT | 60.761 | 60.000 | 10.75 | 0.00 | 45.67 | 4.00 |
1406 | 2393 | 3.738246 | CTGCTGCTGCTGCTGGTG | 61.738 | 66.667 | 27.67 | 13.98 | 40.48 | 4.17 |
1427 | 2417 | 0.251634 | GAGAAGCAGCTAGGCAACCT | 59.748 | 55.000 | 0.00 | 0.00 | 37.71 | 3.50 |
1448 | 2438 | 1.600636 | CCACGGAGGCAAGCAAAGA | 60.601 | 57.895 | 0.00 | 0.00 | 0.00 | 2.52 |
1576 | 2566 | 2.160205 | TCTCGCGAGAAGAGAAGGAAA | 58.840 | 47.619 | 35.16 | 9.06 | 41.29 | 3.13 |
1672 | 2669 | 1.656652 | GCTGCGCAAATCTCCTTAGA | 58.343 | 50.000 | 13.05 | 0.00 | 35.80 | 2.10 |
1681 | 2678 | 1.939934 | ACATGTATACGCTGCGCAAAT | 59.060 | 42.857 | 23.51 | 15.32 | 0.00 | 2.32 |
1685 | 2682 | 0.927537 | TGAACATGTATACGCTGCGC | 59.072 | 50.000 | 23.51 | 0.00 | 0.00 | 6.09 |
1742 | 2739 | 6.710744 | AGTAGTATAGCATAAATGTGTTGCCC | 59.289 | 38.462 | 0.00 | 0.00 | 37.07 | 5.36 |
1743 | 2740 | 7.730364 | AGTAGTATAGCATAAATGTGTTGCC | 57.270 | 36.000 | 0.00 | 0.00 | 37.07 | 4.52 |
1762 | 2762 | 8.915036 | AGTAGCATACATAACTTAGCAAGTAGT | 58.085 | 33.333 | 2.60 | 5.12 | 46.26 | 2.73 |
1789 | 2789 | 9.205513 | TCGTCCCCTAAACTTAGAAAGTATAAT | 57.794 | 33.333 | 0.00 | 0.00 | 41.91 | 1.28 |
1806 | 2806 | 2.218066 | GGGATTTGCTCGTCCCCTA | 58.782 | 57.895 | 9.03 | 0.00 | 46.95 | 3.53 |
1814 | 2814 | 8.491331 | TTGCTATTTTTATTTGGGATTTGCTC | 57.509 | 30.769 | 0.00 | 0.00 | 0.00 | 4.26 |
1843 | 2843 | 1.454572 | ATGAAACCTGCACGCAAGCA | 61.455 | 50.000 | 0.00 | 0.00 | 43.35 | 3.91 |
1849 | 2850 | 0.877071 | AAGCTGATGAAACCTGCACG | 59.123 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
1986 | 2987 | 9.178758 | GGAAAATACCTCAGAGTTGAATATTGT | 57.821 | 33.333 | 0.00 | 0.00 | 30.66 | 2.71 |
2094 | 3095 | 1.062002 | ACGTTGCTGTTGTCGAAGTTG | 59.938 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
2115 | 3116 | 3.459969 | GGGAGAGATCAAACTTGGGGTAT | 59.540 | 47.826 | 0.00 | 0.00 | 0.00 | 2.73 |
2423 | 3424 | 6.628398 | GCTCTTATATTATGGGACGGAGGAAG | 60.628 | 46.154 | 0.00 | 0.00 | 0.00 | 3.46 |
2424 | 3425 | 5.187186 | GCTCTTATATTATGGGACGGAGGAA | 59.813 | 44.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2425 | 3426 | 4.710375 | GCTCTTATATTATGGGACGGAGGA | 59.290 | 45.833 | 0.00 | 0.00 | 0.00 | 3.71 |
2426 | 3427 | 4.440250 | CGCTCTTATATTATGGGACGGAGG | 60.440 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2427 | 3428 | 4.158025 | ACGCTCTTATATTATGGGACGGAG | 59.842 | 45.833 | 0.00 | 0.00 | 0.00 | 4.63 |
2428 | 3429 | 4.084287 | ACGCTCTTATATTATGGGACGGA | 58.916 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
2429 | 3430 | 4.451629 | ACGCTCTTATATTATGGGACGG | 57.548 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
2430 | 3431 | 6.780706 | AAAACGCTCTTATATTATGGGACG | 57.219 | 37.500 | 0.00 | 0.00 | 0.00 | 4.79 |
2431 | 3432 | 7.360361 | CCAAAAACGCTCTTATATTATGGGAC | 58.640 | 38.462 | 0.00 | 0.00 | 0.00 | 4.46 |
2432 | 3433 | 6.016610 | GCCAAAAACGCTCTTATATTATGGGA | 60.017 | 38.462 | 0.00 | 0.00 | 0.00 | 4.37 |
2433 | 3434 | 6.149633 | GCCAAAAACGCTCTTATATTATGGG | 58.850 | 40.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2434 | 3435 | 6.636850 | GTGCCAAAAACGCTCTTATATTATGG | 59.363 | 38.462 | 0.00 | 0.00 | 0.00 | 2.74 |
2435 | 3436 | 7.417612 | AGTGCCAAAAACGCTCTTATATTATG | 58.582 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
2436 | 3437 | 7.568199 | AGTGCCAAAAACGCTCTTATATTAT | 57.432 | 32.000 | 0.00 | 0.00 | 0.00 | 1.28 |
2437 | 3438 | 6.995511 | AGTGCCAAAAACGCTCTTATATTA | 57.004 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
2438 | 3439 | 5.897377 | AGTGCCAAAAACGCTCTTATATT | 57.103 | 34.783 | 0.00 | 0.00 | 0.00 | 1.28 |
2439 | 3440 | 5.878116 | TGTAGTGCCAAAAACGCTCTTATAT | 59.122 | 36.000 | 0.00 | 0.00 | 32.65 | 0.86 |
2440 | 3441 | 5.121142 | GTGTAGTGCCAAAAACGCTCTTATA | 59.879 | 40.000 | 0.00 | 0.00 | 32.65 | 0.98 |
2441 | 3442 | 4.069304 | TGTAGTGCCAAAAACGCTCTTAT | 58.931 | 39.130 | 0.00 | 0.00 | 32.65 | 1.73 |
2442 | 3443 | 3.249080 | GTGTAGTGCCAAAAACGCTCTTA | 59.751 | 43.478 | 0.00 | 0.00 | 32.65 | 2.10 |
2443 | 3444 | 2.032924 | GTGTAGTGCCAAAAACGCTCTT | 59.967 | 45.455 | 0.00 | 0.00 | 32.65 | 2.85 |
2444 | 3445 | 1.602377 | GTGTAGTGCCAAAAACGCTCT | 59.398 | 47.619 | 0.00 | 0.00 | 34.63 | 4.09 |
2445 | 3446 | 1.602377 | AGTGTAGTGCCAAAAACGCTC | 59.398 | 47.619 | 0.00 | 0.00 | 0.00 | 5.03 |
2446 | 3447 | 1.675552 | AGTGTAGTGCCAAAAACGCT | 58.324 | 45.000 | 0.00 | 0.00 | 0.00 | 5.07 |
2447 | 3448 | 2.546789 | ACTAGTGTAGTGCCAAAAACGC | 59.453 | 45.455 | 0.00 | 0.00 | 37.69 | 4.84 |
2448 | 3449 | 5.260027 | GTACTAGTGTAGTGCCAAAAACG | 57.740 | 43.478 | 5.39 | 0.00 | 39.81 | 3.60 |
2456 | 3457 | 4.376717 | GCGTTTTTGGTACTAGTGTAGTGC | 60.377 | 45.833 | 5.39 | 0.00 | 39.81 | 4.40 |
2457 | 3458 | 4.986659 | AGCGTTTTTGGTACTAGTGTAGTG | 59.013 | 41.667 | 5.39 | 0.00 | 39.81 | 2.74 |
2458 | 3459 | 5.010415 | AGAGCGTTTTTGGTACTAGTGTAGT | 59.990 | 40.000 | 5.39 | 0.00 | 42.68 | 2.73 |
2459 | 3460 | 5.467705 | AGAGCGTTTTTGGTACTAGTGTAG | 58.532 | 41.667 | 5.39 | 0.00 | 0.00 | 2.74 |
2460 | 3461 | 5.458041 | AGAGCGTTTTTGGTACTAGTGTA | 57.542 | 39.130 | 5.39 | 0.00 | 0.00 | 2.90 |
2461 | 3462 | 4.332428 | AGAGCGTTTTTGGTACTAGTGT | 57.668 | 40.909 | 5.39 | 0.00 | 0.00 | 3.55 |
2462 | 3463 | 6.963049 | ATAAGAGCGTTTTTGGTACTAGTG | 57.037 | 37.500 | 5.39 | 0.00 | 0.00 | 2.74 |
2466 | 3467 | 9.052759 | CCATAATATAAGAGCGTTTTTGGTACT | 57.947 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
2467 | 3468 | 8.287503 | CCCATAATATAAGAGCGTTTTTGGTAC | 58.712 | 37.037 | 0.00 | 0.00 | 0.00 | 3.34 |
2468 | 3469 | 8.212312 | TCCCATAATATAAGAGCGTTTTTGGTA | 58.788 | 33.333 | 0.00 | 0.00 | 0.00 | 3.25 |
2469 | 3470 | 7.012989 | GTCCCATAATATAAGAGCGTTTTTGGT | 59.987 | 37.037 | 0.00 | 0.00 | 0.00 | 3.67 |
2470 | 3471 | 7.360361 | GTCCCATAATATAAGAGCGTTTTTGG | 58.640 | 38.462 | 0.00 | 0.00 | 0.00 | 3.28 |
2471 | 3472 | 7.069569 | CGTCCCATAATATAAGAGCGTTTTTG | 58.930 | 38.462 | 0.00 | 0.00 | 0.00 | 2.44 |
2472 | 3473 | 6.204108 | CCGTCCCATAATATAAGAGCGTTTTT | 59.796 | 38.462 | 0.00 | 0.00 | 0.00 | 1.94 |
2473 | 3474 | 5.699458 | CCGTCCCATAATATAAGAGCGTTTT | 59.301 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2474 | 3475 | 5.011329 | TCCGTCCCATAATATAAGAGCGTTT | 59.989 | 40.000 | 0.00 | 0.00 | 0.00 | 3.60 |
2475 | 3476 | 4.525487 | TCCGTCCCATAATATAAGAGCGTT | 59.475 | 41.667 | 0.00 | 0.00 | 0.00 | 4.84 |
2476 | 3477 | 4.084287 | TCCGTCCCATAATATAAGAGCGT | 58.916 | 43.478 | 0.00 | 0.00 | 0.00 | 5.07 |
2477 | 3478 | 4.158025 | ACTCCGTCCCATAATATAAGAGCG | 59.842 | 45.833 | 0.00 | 0.00 | 0.00 | 5.03 |
2478 | 3479 | 5.185249 | TCACTCCGTCCCATAATATAAGAGC | 59.815 | 44.000 | 0.00 | 0.00 | 0.00 | 4.09 |
2479 | 3480 | 6.434652 | ACTCACTCCGTCCCATAATATAAGAG | 59.565 | 42.308 | 0.00 | 0.00 | 0.00 | 2.85 |
2480 | 3481 | 6.312529 | ACTCACTCCGTCCCATAATATAAGA | 58.687 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
2481 | 3482 | 6.591750 | ACTCACTCCGTCCCATAATATAAG | 57.408 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
2482 | 3483 | 9.758021 | TTATACTCACTCCGTCCCATAATATAA | 57.242 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
2483 | 3484 | 9.404848 | CTTATACTCACTCCGTCCCATAATATA | 57.595 | 37.037 | 0.00 | 0.00 | 0.00 | 0.86 |
2484 | 3485 | 8.114102 | TCTTATACTCACTCCGTCCCATAATAT | 58.886 | 37.037 | 0.00 | 0.00 | 0.00 | 1.28 |
2485 | 3486 | 7.464273 | TCTTATACTCACTCCGTCCCATAATA | 58.536 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
2486 | 3487 | 6.312529 | TCTTATACTCACTCCGTCCCATAAT | 58.687 | 40.000 | 0.00 | 0.00 | 0.00 | 1.28 |
2487 | 3488 | 5.698104 | TCTTATACTCACTCCGTCCCATAA | 58.302 | 41.667 | 0.00 | 0.00 | 0.00 | 1.90 |
2488 | 3489 | 5.314718 | TCTTATACTCACTCCGTCCCATA | 57.685 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
2489 | 3490 | 4.180377 | TCTTATACTCACTCCGTCCCAT | 57.820 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
2490 | 3491 | 3.657398 | TCTTATACTCACTCCGTCCCA | 57.343 | 47.619 | 0.00 | 0.00 | 0.00 | 4.37 |
2491 | 3492 | 3.890147 | ACATCTTATACTCACTCCGTCCC | 59.110 | 47.826 | 0.00 | 0.00 | 0.00 | 4.46 |
2492 | 3493 | 5.299782 | AGAACATCTTATACTCACTCCGTCC | 59.700 | 44.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2493 | 3494 | 6.038382 | TCAGAACATCTTATACTCACTCCGTC | 59.962 | 42.308 | 0.00 | 0.00 | 0.00 | 4.79 |
2494 | 3495 | 5.886474 | TCAGAACATCTTATACTCACTCCGT | 59.114 | 40.000 | 0.00 | 0.00 | 0.00 | 4.69 |
2495 | 3496 | 6.038825 | AGTCAGAACATCTTATACTCACTCCG | 59.961 | 42.308 | 0.00 | 0.00 | 0.00 | 4.63 |
2496 | 3497 | 7.341445 | AGTCAGAACATCTTATACTCACTCC | 57.659 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2497 | 3498 | 9.646427 | AAAAGTCAGAACATCTTATACTCACTC | 57.354 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
2606 | 3608 | 7.661847 | ACCTCCATTCCGAATTATAAGATGTTC | 59.338 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
2626 | 3628 | 5.195185 | TGTTCATATCGTGTACTACCTCCA | 58.805 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
2653 | 3655 | 7.268199 | ACACATGTTCATATGAAGCTATTGG | 57.732 | 36.000 | 18.47 | 7.88 | 34.27 | 3.16 |
2703 | 3714 | 8.104566 | TGGTACAATATAACTGCAAACCTAAGT | 58.895 | 33.333 | 0.00 | 0.00 | 31.92 | 2.24 |
2785 | 3796 | 6.649141 | AGCACGATCAGAACTTTGTTATGTAA | 59.351 | 34.615 | 5.23 | 0.00 | 0.00 | 2.41 |
3147 | 4158 | 3.516700 | CTGGGGCCAAATCTTCAATTTCT | 59.483 | 43.478 | 4.39 | 0.00 | 0.00 | 2.52 |
3446 | 4457 | 5.078411 | ACTACACAGTTAGCTTGATCTGG | 57.922 | 43.478 | 0.00 | 0.00 | 32.92 | 3.86 |
3514 | 4526 | 6.468956 | GTGTTTGCTGTCAATATAATGGAACG | 59.531 | 38.462 | 0.00 | 0.00 | 31.33 | 3.95 |
3522 | 4534 | 6.179756 | AGACATGGTGTTTGCTGTCAATATA | 58.820 | 36.000 | 0.00 | 0.00 | 40.32 | 0.86 |
3594 | 4606 | 2.205074 | GACACTGGTAAGCATGGATCG | 58.795 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
3685 | 4697 | 4.796038 | ATCCAAAGTGAAGGCAGAATTG | 57.204 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
3686 | 4698 | 5.813513 | AAATCCAAAGTGAAGGCAGAATT | 57.186 | 34.783 | 0.00 | 0.00 | 0.00 | 2.17 |
3688 | 4700 | 6.493115 | TCAATAAATCCAAAGTGAAGGCAGAA | 59.507 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
3690 | 4702 | 6.271488 | TCAATAAATCCAAAGTGAAGGCAG | 57.729 | 37.500 | 0.00 | 0.00 | 0.00 | 4.85 |
3727 | 4740 | 7.466804 | TGTGAGGGACAATTCTTAGGTTTTAT | 58.533 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
4083 | 5106 | 1.135315 | CAAAGAGGATGGCAACGCG | 59.865 | 57.895 | 3.53 | 3.53 | 42.51 | 6.01 |
4183 | 5206 | 4.021016 | GTCTGGACCACTGTATCAACTTCT | 60.021 | 45.833 | 0.00 | 0.00 | 0.00 | 2.85 |
4225 | 5248 | 2.756840 | TGAGCACAGAACATCAGGAG | 57.243 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
4314 | 5339 | 5.121454 | GGAATCAGTAAGTGCAGAAGTTCTG | 59.879 | 44.000 | 25.68 | 25.68 | 46.90 | 3.02 |
4333 | 5358 | 1.901833 | ACCTGCAAATGGTTGGGAATC | 59.098 | 47.619 | 0.00 | 0.00 | 33.34 | 2.52 |
4345 | 5370 | 7.013274 | GCCTATTGTTCTGAATATACCTGCAAA | 59.987 | 37.037 | 0.00 | 0.00 | 0.00 | 3.68 |
4476 | 5501 | 7.332926 | CAGTAGTGTTCTCAAGCACAATATTCT | 59.667 | 37.037 | 0.00 | 0.00 | 38.02 | 2.40 |
4539 | 5564 | 2.159476 | GCTCTCGACGTATGTTACCACA | 60.159 | 50.000 | 0.00 | 0.00 | 37.31 | 4.17 |
4554 | 5579 | 1.734465 | GAAGGACCATTGTTGCTCTCG | 59.266 | 52.381 | 0.00 | 0.00 | 0.00 | 4.04 |
4639 | 5667 | 1.216444 | CGAGCTGCAGCAGGTAAGA | 59.784 | 57.895 | 38.24 | 0.00 | 42.53 | 2.10 |
4666 | 5694 | 1.180029 | CACTTGGCCCCTGAAGATTG | 58.820 | 55.000 | 7.51 | 0.00 | 0.00 | 2.67 |
4879 | 5907 | 5.879237 | TGCAAGAACAACAGTTTCTACAAG | 58.121 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
5022 | 6050 | 4.562143 | CCGTAGTATACTATGCCAAACCCC | 60.562 | 50.000 | 21.98 | 3.85 | 40.12 | 4.95 |
5223 | 6251 | 9.103048 | CATACTAAAAGCAGAAACAAGTAAACG | 57.897 | 33.333 | 0.00 | 0.00 | 0.00 | 3.60 |
5400 | 6506 | 7.849804 | TTGCAGAAACATAGAGAAGGATTAC | 57.150 | 36.000 | 0.00 | 0.00 | 0.00 | 1.89 |
5577 | 6684 | 3.197333 | ACTCATCAGGACACATCTGGAAG | 59.803 | 47.826 | 0.00 | 0.00 | 33.36 | 3.46 |
5578 | 6685 | 3.176411 | ACTCATCAGGACACATCTGGAA | 58.824 | 45.455 | 0.00 | 0.00 | 33.36 | 3.53 |
5580 | 6687 | 3.623906 | AACTCATCAGGACACATCTGG | 57.376 | 47.619 | 0.00 | 0.00 | 33.36 | 3.86 |
5582 | 6689 | 4.029520 | AGCTAACTCATCAGGACACATCT | 58.970 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
5584 | 6691 | 3.118482 | CCAGCTAACTCATCAGGACACAT | 60.118 | 47.826 | 0.00 | 0.00 | 0.00 | 3.21 |
5585 | 6692 | 2.234661 | CCAGCTAACTCATCAGGACACA | 59.765 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
5586 | 6693 | 2.898705 | CCAGCTAACTCATCAGGACAC | 58.101 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
5794 | 6903 | 6.768483 | TGTGCATATGCCAACAGTATAGTAT | 58.232 | 36.000 | 24.54 | 0.00 | 41.18 | 2.12 |
5795 | 6904 | 6.168270 | TGTGCATATGCCAACAGTATAGTA | 57.832 | 37.500 | 24.54 | 0.00 | 41.18 | 1.82 |
5796 | 6905 | 5.034852 | TGTGCATATGCCAACAGTATAGT | 57.965 | 39.130 | 24.54 | 0.00 | 41.18 | 2.12 |
5797 | 6906 | 7.671495 | TTATGTGCATATGCCAACAGTATAG | 57.329 | 36.000 | 24.54 | 0.00 | 41.18 | 1.31 |
5798 | 6907 | 7.665145 | ACATTATGTGCATATGCCAACAGTATA | 59.335 | 33.333 | 24.54 | 9.87 | 41.18 | 1.47 |
5852 | 6961 | 9.431887 | TGTTGTACAAGATCCTAAATACAGTTC | 57.568 | 33.333 | 8.98 | 0.00 | 0.00 | 3.01 |
5899 | 7008 | 4.826556 | AGAAGCTGATCCAAGTACAAGTC | 58.173 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
6009 | 7118 | 8.336801 | ACTACTGGAATTTCTTAATGGTTCAC | 57.663 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
6081 | 7196 | 2.182030 | CGGTCCTCGGCTCAAGTC | 59.818 | 66.667 | 0.00 | 0.00 | 34.75 | 3.01 |
6594 | 7711 | 4.402056 | GCTACCAGGATAGCAAACACTA | 57.598 | 45.455 | 13.36 | 0.00 | 45.83 | 2.74 |
6628 | 7745 | 7.042791 | TCGCCATCAAAAGAAGAAAATGAAAAC | 60.043 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
6634 | 7751 | 5.712152 | ACTCGCCATCAAAAGAAGAAAAT | 57.288 | 34.783 | 0.00 | 0.00 | 0.00 | 1.82 |
6683 | 7803 | 7.819415 | CCAAAACTGTATATGTCACTCTTCTCA | 59.181 | 37.037 | 0.00 | 0.00 | 0.00 | 3.27 |
6758 | 7878 | 3.575399 | GCAGTTGAGCCCAAAGTTG | 57.425 | 52.632 | 0.00 | 0.00 | 33.49 | 3.16 |
6805 | 7925 | 1.328986 | GCAGAAAGCTAACAGATCGCC | 59.671 | 52.381 | 0.00 | 0.00 | 41.15 | 5.54 |
6929 | 8049 | 1.956170 | GCCGGTATCCAGTGATGCG | 60.956 | 63.158 | 1.90 | 0.00 | 34.71 | 4.73 |
7022 | 8142 | 1.323271 | TGAGCACCTCGGAGATGGTC | 61.323 | 60.000 | 21.90 | 21.90 | 36.79 | 4.02 |
7055 | 8175 | 4.592192 | ACCTCGATGGCGATGGCG | 62.592 | 66.667 | 0.00 | 0.00 | 46.80 | 5.69 |
7085 | 8205 | 4.357279 | AGCTGCTGGACTTGGGGC | 62.357 | 66.667 | 0.00 | 0.00 | 0.00 | 5.80 |
7158 | 8278 | 0.602638 | AACGACGCATTCTGCTCCAA | 60.603 | 50.000 | 0.00 | 0.00 | 42.25 | 3.53 |
7169 | 8289 | 1.535028 | AGCATTTCATCAAACGACGCA | 59.465 | 42.857 | 0.00 | 0.00 | 0.00 | 5.24 |
7199 | 8319 | 2.614259 | TCCTGATTCTATCTGAGGCCC | 58.386 | 52.381 | 0.00 | 0.00 | 0.00 | 5.80 |
7208 | 8328 | 6.051717 | CGACTTTGGTGAATCCTGATTCTAT | 58.948 | 40.000 | 18.00 | 0.23 | 45.55 | 1.98 |
7224 | 8344 | 3.541711 | CTTACACGAAAAGCGACTTTGG | 58.458 | 45.455 | 5.75 | 4.60 | 44.57 | 3.28 |
7259 | 8383 | 6.296026 | ACAGAAAGCCTAACTAACACATGAA | 58.704 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
7280 | 8404 | 7.599998 | AGCTTTCAAATAATTACCAGCAAACAG | 59.400 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
7281 | 8405 | 7.384660 | CAGCTTTCAAATAATTACCAGCAAACA | 59.615 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
7282 | 8406 | 7.384932 | ACAGCTTTCAAATAATTACCAGCAAAC | 59.615 | 33.333 | 0.00 | 0.00 | 0.00 | 2.93 |
7286 | 8410 | 5.807011 | CCACAGCTTTCAAATAATTACCAGC | 59.193 | 40.000 | 0.00 | 0.00 | 0.00 | 4.85 |
7295 | 8419 | 6.839124 | AATGTCATCCACAGCTTTCAAATA | 57.161 | 33.333 | 0.00 | 0.00 | 38.85 | 1.40 |
7321 | 8445 | 4.825085 | CCCAGTTTGTACTTCCAAGCTAAA | 59.175 | 41.667 | 0.00 | 0.00 | 34.62 | 1.85 |
7324 | 8448 | 2.441750 | TCCCAGTTTGTACTTCCAAGCT | 59.558 | 45.455 | 0.00 | 0.00 | 36.47 | 3.74 |
7325 | 8449 | 2.858745 | TCCCAGTTTGTACTTCCAAGC | 58.141 | 47.619 | 0.00 | 0.00 | 30.26 | 4.01 |
7326 | 8450 | 6.040391 | TCAAATTCCCAGTTTGTACTTCCAAG | 59.960 | 38.462 | 0.00 | 0.00 | 37.70 | 3.61 |
7327 | 8451 | 5.894393 | TCAAATTCCCAGTTTGTACTTCCAA | 59.106 | 36.000 | 0.00 | 0.00 | 37.70 | 3.53 |
7329 | 8453 | 6.389906 | CATCAAATTCCCAGTTTGTACTTCC | 58.610 | 40.000 | 0.00 | 0.00 | 37.70 | 3.46 |
7331 | 8455 | 5.838521 | ACCATCAAATTCCCAGTTTGTACTT | 59.161 | 36.000 | 0.00 | 0.00 | 37.70 | 2.24 |
7340 | 8464 | 4.768968 | AGTCTTTCACCATCAAATTCCCAG | 59.231 | 41.667 | 0.00 | 0.00 | 0.00 | 4.45 |
7362 | 8486 | 3.131709 | ACAACAGTTCCAGATCACCAG | 57.868 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
7386 | 8510 | 6.114767 | ACCAATCTGAAGCACAAAAACAAAT | 58.885 | 32.000 | 0.00 | 0.00 | 0.00 | 2.32 |
7387 | 8511 | 5.486526 | ACCAATCTGAAGCACAAAAACAAA | 58.513 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
7393 | 8517 | 3.295093 | TGGAACCAATCTGAAGCACAAA | 58.705 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
7404 | 8528 | 8.141268 | TGACATCTTAAAAGTTTGGAACCAATC | 58.859 | 33.333 | 7.12 | 6.80 | 35.70 | 2.67 |
7412 | 8536 | 5.278957 | CCCACCTGACATCTTAAAAGTTTGG | 60.279 | 44.000 | 0.00 | 0.00 | 0.00 | 3.28 |
7419 | 8543 | 1.948611 | GCGCCCACCTGACATCTTAAA | 60.949 | 52.381 | 0.00 | 0.00 | 0.00 | 1.52 |
7423 | 8547 | 4.101448 | GGCGCCCACCTGACATCT | 62.101 | 66.667 | 18.11 | 0.00 | 0.00 | 2.90 |
7431 | 8555 | 4.115199 | ATCTCCTTGGCGCCCACC | 62.115 | 66.667 | 26.77 | 0.00 | 30.78 | 4.61 |
7432 | 8556 | 2.825836 | CATCTCCTTGGCGCCCAC | 60.826 | 66.667 | 26.77 | 0.00 | 30.78 | 4.61 |
7433 | 8557 | 4.113815 | CCATCTCCTTGGCGCCCA | 62.114 | 66.667 | 26.77 | 13.22 | 0.00 | 5.36 |
7465 | 8601 | 1.173913 | GCAAACCCCCATACTGTCAC | 58.826 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
7466 | 8602 | 0.774276 | TGCAAACCCCCATACTGTCA | 59.226 | 50.000 | 0.00 | 0.00 | 0.00 | 3.58 |
7472 | 8608 | 4.533707 | TGATTTTGATTGCAAACCCCCATA | 59.466 | 37.500 | 1.71 | 0.00 | 43.27 | 2.74 |
7476 | 8612 | 3.498018 | GTGTGATTTTGATTGCAAACCCC | 59.502 | 43.478 | 1.71 | 0.00 | 43.27 | 4.95 |
7486 | 8622 | 6.266168 | TCTTATTTGGCGTGTGATTTTGAT | 57.734 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
7512 | 8648 | 1.473677 | TGAAATTGAATCCGGCAGCTG | 59.526 | 47.619 | 10.11 | 10.11 | 0.00 | 4.24 |
7514 | 8650 | 2.877043 | ATGAAATTGAATCCGGCAGC | 57.123 | 45.000 | 0.00 | 0.00 | 0.00 | 5.25 |
7519 | 8655 | 3.628017 | GGCCGTTATGAAATTGAATCCG | 58.372 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 |
7534 | 8670 | 0.035439 | ATGAACATTCCTCGGCCGTT | 60.035 | 50.000 | 27.15 | 10.21 | 0.00 | 4.44 |
7540 | 8676 | 5.869753 | AGTTTTGAGATGAACATTCCTCG | 57.130 | 39.130 | 0.00 | 0.00 | 0.00 | 4.63 |
7567 | 8703 | 2.607187 | ACGATTGATCAGACGTGGTTC | 58.393 | 47.619 | 21.89 | 0.00 | 37.58 | 3.62 |
7569 | 8705 | 2.743636 | AACGATTGATCAGACGTGGT | 57.256 | 45.000 | 22.77 | 10.85 | 38.92 | 4.16 |
7573 | 8709 | 7.859613 | AGTAATGATAACGATTGATCAGACG | 57.140 | 36.000 | 17.59 | 17.59 | 35.60 | 4.18 |
7609 | 8745 | 3.243334 | GCTCTTCTCAAGCAAGCTTTTGT | 60.243 | 43.478 | 4.24 | 0.00 | 39.61 | 2.83 |
7628 | 8765 | 6.529125 | TGTTTGTTACTAGCTATTACGTGCTC | 59.471 | 38.462 | 0.00 | 0.00 | 40.35 | 4.26 |
7630 | 8767 | 6.454715 | GGTGTTTGTTACTAGCTATTACGTGC | 60.455 | 42.308 | 0.00 | 0.00 | 0.00 | 5.34 |
7634 | 8771 | 9.769093 | CATTTGGTGTTTGTTACTAGCTATTAC | 57.231 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
7636 | 8773 | 8.404107 | ACATTTGGTGTTTGTTACTAGCTATT | 57.596 | 30.769 | 0.00 | 0.00 | 38.01 | 1.73 |
7638 | 8775 | 8.152246 | ACTACATTTGGTGTTTGTTACTAGCTA | 58.848 | 33.333 | 0.00 | 0.00 | 42.29 | 3.32 |
7654 | 8791 | 8.925161 | TGAAGAAAGTTTTTGACTACATTTGG | 57.075 | 30.769 | 0.00 | 0.00 | 37.72 | 3.28 |
7674 | 8812 | 7.581571 | ACAATTGTTTGGCTTCAGACTGAAGA | 61.582 | 38.462 | 37.89 | 21.77 | 44.92 | 2.87 |
7682 | 8820 | 4.311816 | ACTGACAATTGTTTGGCTTCAG | 57.688 | 40.909 | 13.36 | 14.83 | 41.80 | 3.02 |
7686 | 8824 | 4.160252 | AGTTCAACTGACAATTGTTTGGCT | 59.840 | 37.500 | 13.36 | 11.62 | 41.80 | 4.75 |
7707 | 8845 | 8.743085 | AAGCAAATGTGACAATCATCTATAGT | 57.257 | 30.769 | 0.00 | 0.00 | 0.00 | 2.12 |
7744 | 8882 | 1.187087 | TGGTGTGGGGTTTGTTGAAC | 58.813 | 50.000 | 0.00 | 0.00 | 37.53 | 3.18 |
7837 | 8978 | 2.166907 | TGTTTTCTTGCCTTGGGGAA | 57.833 | 45.000 | 0.00 | 0.00 | 33.58 | 3.97 |
7870 | 9011 | 2.351726 | GCGTCTGTTCTATTTCGCCATT | 59.648 | 45.455 | 0.00 | 0.00 | 38.16 | 3.16 |
7887 | 9028 | 3.512033 | AGAGAGACACCATTTAGCGTC | 57.488 | 47.619 | 0.00 | 0.00 | 0.00 | 5.19 |
7896 | 9039 | 1.620819 | GGCTTGAGAAGAGAGACACCA | 59.379 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
7947 | 9090 | 6.388619 | AACAGGTGGTCCTTGAAGTATATT | 57.611 | 37.500 | 0.00 | 0.00 | 43.07 | 1.28 |
7969 | 9112 | 5.592104 | TCTAGGCGAAGTCATACATGAAA | 57.408 | 39.130 | 0.00 | 0.00 | 38.75 | 2.69 |
7997 | 9140 | 1.704628 | TCCTTTGCTTGGTCATCAGGA | 59.295 | 47.619 | 0.00 | 0.00 | 0.00 | 3.86 |
8014 | 9161 | 0.250901 | AATGACCGCTGCTTGTTCCT | 60.251 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
8022 | 9169 | 0.248621 | GGCACATTAATGACCGCTGC | 60.249 | 55.000 | 22.16 | 18.56 | 0.00 | 5.25 |
8028 | 9176 | 3.622459 | GTGCCGGCACATTAATGAC | 57.378 | 52.632 | 46.18 | 22.21 | 45.53 | 3.06 |
8056 | 9204 | 2.680841 | GCTTTGTGTAGTGTTGTGGACA | 59.319 | 45.455 | 0.00 | 0.00 | 35.42 | 4.02 |
8059 | 9207 | 3.376859 | TCTTGCTTTGTGTAGTGTTGTGG | 59.623 | 43.478 | 0.00 | 0.00 | 0.00 | 4.17 |
8068 | 9216 | 9.225436 | TGTGTGATTATAATCTTGCTTTGTGTA | 57.775 | 29.630 | 22.77 | 0.00 | 36.39 | 2.90 |
8080 | 9228 | 8.190784 | CCCTTTTGTCCTTGTGTGATTATAATC | 58.809 | 37.037 | 17.09 | 17.09 | 35.97 | 1.75 |
8089 | 9237 | 1.681264 | GTCCCCTTTTGTCCTTGTGTG | 59.319 | 52.381 | 0.00 | 0.00 | 0.00 | 3.82 |
8104 | 9252 | 2.973694 | ATATACGTGTGTGTGTCCCC | 57.026 | 50.000 | 0.00 | 0.00 | 0.00 | 4.81 |
8105 | 9253 | 5.190992 | TGATATATACGTGTGTGTGTCCC | 57.809 | 43.478 | 0.00 | 0.00 | 0.00 | 4.46 |
8108 | 9256 | 9.811995 | ACTAATTTGATATATACGTGTGTGTGT | 57.188 | 29.630 | 0.00 | 0.00 | 0.00 | 3.72 |
8132 | 9280 | 7.722949 | ATGTGTTTCCATCATTTTATCCACT | 57.277 | 32.000 | 0.00 | 0.00 | 0.00 | 4.00 |
8222 | 9370 | 4.617959 | CTGGTACGTGAAAGTTCTTCTGA | 58.382 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
8226 | 9374 | 3.181469 | TGAGCTGGTACGTGAAAGTTCTT | 60.181 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.