Multiple sequence alignment - TraesCS5D01G160500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G160500 chr5D 100.000 4634 0 0 1 4634 250076869 250072236 0.000000e+00 8558
1 TraesCS5D01G160500 chr5D 82.847 822 121 12 2875 3678 250407808 250406989 0.000000e+00 719
2 TraesCS5D01G160500 chr5D 80.412 776 128 13 982 1755 250409554 250408801 1.870000e-158 569
3 TraesCS5D01G160500 chr5D 97.753 89 2 0 4047 4135 225253182 225253270 2.230000e-33 154
4 TraesCS5D01G160500 chr5D 95.699 93 4 0 4044 4136 447423721 447423813 2.890000e-32 150
5 TraesCS5D01G160500 chr5B 96.656 1794 41 3 2025 3802 283022545 283020755 0.000000e+00 2963
6 TraesCS5D01G160500 chr5B 94.129 1005 34 7 921 1904 283023548 283022548 0.000000e+00 1506
7 TraesCS5D01G160500 chr5B 83.800 821 113 10 2876 3678 283204942 283204124 0.000000e+00 761
8 TraesCS5D01G160500 chr5B 79.665 777 120 19 982 1755 283206686 283205945 4.110000e-145 525
9 TraesCS5D01G160500 chr5B 90.033 301 27 1 3749 4046 283020754 283020454 2.020000e-103 387
10 TraesCS5D01G160500 chr5B 90.000 300 21 6 1 298 283164617 283164325 3.380000e-101 379
11 TraesCS5D01G160500 chr5B 84.709 327 26 8 617 929 283029139 283028823 5.830000e-79 305
12 TraesCS5D01G160500 chr5B 84.932 292 33 6 301 586 283031189 283030903 7.590000e-73 285
13 TraesCS5D01G160500 chr5B 97.753 89 2 0 4047 4135 503529013 503528925 2.230000e-33 154
14 TraesCS5D01G160500 chr5B 82.877 146 21 3 3820 3964 283204019 283203877 1.350000e-25 128
15 TraesCS5D01G160500 chr5A 95.054 1658 63 8 869 2512 333422452 333420800 0.000000e+00 2590
16 TraesCS5D01G160500 chr5A 95.876 1261 23 5 2808 4052 333420796 333419549 0.000000e+00 2013
17 TraesCS5D01G160500 chr5A 83.535 826 116 5 2875 3682 333441237 333440414 0.000000e+00 754
18 TraesCS5D01G160500 chr5A 80.446 762 126 12 995 1755 333442875 333442136 1.130000e-155 560
19 TraesCS5D01G160500 chr5A 94.470 217 12 0 4182 4398 333419439 333419223 7.430000e-88 335
20 TraesCS5D01G160500 chr5A 93.434 198 10 2 1 195 333433914 333433717 1.630000e-74 291
21 TraesCS5D01G160500 chr5A 95.333 150 7 0 4134 4283 333419550 333419401 5.990000e-59 239
22 TraesCS5D01G160500 chr5A 89.375 160 10 5 4476 4634 333419226 333419073 1.320000e-45 195
23 TraesCS5D01G160500 chr5A 80.859 256 22 7 619 861 333435236 333435477 4.770000e-40 176
24 TraesCS5D01G160500 chr5A 93.548 93 6 0 707 799 333433705 333433613 6.250000e-29 139
25 TraesCS5D01G160500 chr5A 85.385 130 16 1 3835 3964 333440358 333440232 1.050000e-26 132
26 TraesCS5D01G160500 chr3B 98.864 88 1 0 4048 4135 76468515 76468602 1.730000e-34 158
27 TraesCS5D01G160500 chr7A 96.774 93 3 0 4043 4135 639594942 639595034 6.210000e-34 156
28 TraesCS5D01G160500 chr3A 97.778 90 2 0 4047 4136 16809099 16809188 6.210000e-34 156
29 TraesCS5D01G160500 chr7D 95.745 94 4 0 4043 4136 463109036 463109129 8.030000e-33 152
30 TraesCS5D01G160500 chr7D 82.993 147 20 4 3837 3983 126476882 126476741 1.350000e-25 128
31 TraesCS5D01G160500 chr2A 95.699 93 4 0 4043 4135 71560742 71560834 2.890000e-32 150
32 TraesCS5D01G160500 chr4B 94.792 96 4 1 4051 4146 500840052 500839958 1.040000e-31 148
33 TraesCS5D01G160500 chr7B 88.235 102 12 0 3861 3962 87147838 87147737 6.300000e-24 122
34 TraesCS5D01G160500 chr7B 82.877 146 14 8 380 521 388950826 388950964 2.260000e-23 121


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G160500 chr5D 250072236 250076869 4633 True 8558.000000 8558 100.0000 1 4634 1 chr5D.!!$R1 4633
1 TraesCS5D01G160500 chr5D 250406989 250409554 2565 True 644.000000 719 81.6295 982 3678 2 chr5D.!!$R2 2696
2 TraesCS5D01G160500 chr5B 283020454 283023548 3094 True 1618.666667 2963 93.6060 921 4046 3 chr5B.!!$R3 3125
3 TraesCS5D01G160500 chr5B 283203877 283206686 2809 True 471.333333 761 82.1140 982 3964 3 chr5B.!!$R5 2982
4 TraesCS5D01G160500 chr5B 283028823 283031189 2366 True 295.000000 305 84.8205 301 929 2 chr5B.!!$R4 628
5 TraesCS5D01G160500 chr5A 333419073 333422452 3379 True 1074.400000 2590 94.0216 869 4634 5 chr5A.!!$R1 3765
6 TraesCS5D01G160500 chr5A 333440232 333442875 2643 True 482.000000 754 83.1220 995 3964 3 chr5A.!!$R3 2969

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
482 494 0.036022 AAGGGTTGAGCAGAGCAGAC 59.964 55.000 0.0 0.0 0.0 3.51 F
925 2684 0.098200 GCGCAAAATACTCCCGTTCC 59.902 55.000 0.3 0.0 0.0 3.62 F
963 2722 0.321653 CCCCTTTCCGTCCTCTTGTG 60.322 60.000 0.0 0.0 0.0 3.33 F
2708 4688 1.669115 CCAGTTCGGTGCAGGTCTG 60.669 63.158 0.0 0.0 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1941 3832 1.815003 CCGTTAGTTCCCAGTACGACT 59.185 52.381 0.00 0.0 0.00 4.18 R
2787 4767 2.290367 TGCGCACCAATTATCTATGCAC 59.710 45.455 5.66 0.0 36.02 4.57 R
3126 5138 5.585500 TTTTAGAAACATCGGTGTCTTCG 57.415 39.130 0.00 0.0 38.49 3.79 R
4407 6571 0.178964 TGCCTTGCCTTGCCTAAGTT 60.179 50.000 0.00 0.0 31.80 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 62 7.925703 AAAATACGAGGACTTCATATGTACG 57.074 36.000 1.90 0.00 0.00 3.67
62 63 6.630444 AATACGAGGACTTCATATGTACGT 57.370 37.500 1.90 0.00 35.71 3.57
63 64 4.288670 ACGAGGACTTCATATGTACGTG 57.711 45.455 0.00 0.00 0.00 4.49
64 65 3.066342 ACGAGGACTTCATATGTACGTGG 59.934 47.826 0.00 0.00 0.00 4.94
65 66 3.381949 GAGGACTTCATATGTACGTGGC 58.618 50.000 0.00 0.00 0.00 5.01
66 67 3.031736 AGGACTTCATATGTACGTGGCT 58.968 45.455 0.00 0.00 0.00 4.75
67 68 3.451178 AGGACTTCATATGTACGTGGCTT 59.549 43.478 0.00 0.00 0.00 4.35
68 69 3.555956 GGACTTCATATGTACGTGGCTTG 59.444 47.826 0.00 0.00 0.00 4.01
69 70 4.181578 GACTTCATATGTACGTGGCTTGT 58.818 43.478 0.00 0.00 0.00 3.16
70 71 4.575885 ACTTCATATGTACGTGGCTTGTT 58.424 39.130 0.00 0.00 0.00 2.83
71 72 4.630069 ACTTCATATGTACGTGGCTTGTTC 59.370 41.667 0.00 0.00 0.00 3.18
72 73 4.195225 TCATATGTACGTGGCTTGTTCA 57.805 40.909 0.00 0.00 0.00 3.18
73 74 4.180817 TCATATGTACGTGGCTTGTTCAG 58.819 43.478 0.00 0.00 0.00 3.02
74 75 2.543777 ATGTACGTGGCTTGTTCAGT 57.456 45.000 0.00 0.00 0.00 3.41
75 76 2.319136 TGTACGTGGCTTGTTCAGTT 57.681 45.000 0.00 0.00 0.00 3.16
76 77 2.634600 TGTACGTGGCTTGTTCAGTTT 58.365 42.857 0.00 0.00 0.00 2.66
77 78 3.011119 TGTACGTGGCTTGTTCAGTTTT 58.989 40.909 0.00 0.00 0.00 2.43
78 79 4.190001 TGTACGTGGCTTGTTCAGTTTTA 58.810 39.130 0.00 0.00 0.00 1.52
79 80 4.634883 TGTACGTGGCTTGTTCAGTTTTAA 59.365 37.500 0.00 0.00 0.00 1.52
80 81 4.287238 ACGTGGCTTGTTCAGTTTTAAG 57.713 40.909 0.00 0.00 0.00 1.85
81 82 3.942748 ACGTGGCTTGTTCAGTTTTAAGA 59.057 39.130 0.00 0.00 0.00 2.10
82 83 4.396790 ACGTGGCTTGTTCAGTTTTAAGAA 59.603 37.500 0.00 0.00 0.00 2.52
83 84 4.733405 CGTGGCTTGTTCAGTTTTAAGAAC 59.267 41.667 0.00 0.00 43.31 3.01
84 85 4.733405 GTGGCTTGTTCAGTTTTAAGAACG 59.267 41.667 0.00 0.00 45.34 3.95
85 86 4.636648 TGGCTTGTTCAGTTTTAAGAACGA 59.363 37.500 0.00 0.00 45.34 3.85
86 87 4.968181 GGCTTGTTCAGTTTTAAGAACGAC 59.032 41.667 0.00 0.00 45.34 4.34
87 88 5.448089 GGCTTGTTCAGTTTTAAGAACGACA 60.448 40.000 0.00 3.70 45.34 4.35
88 89 6.025280 GCTTGTTCAGTTTTAAGAACGACAA 58.975 36.000 0.00 8.83 45.34 3.18
89 90 6.021704 GCTTGTTCAGTTTTAAGAACGACAAC 60.022 38.462 0.00 4.41 45.34 3.32
90 91 6.483385 TGTTCAGTTTTAAGAACGACAACA 57.517 33.333 0.00 6.14 45.34 3.33
91 92 6.900189 TGTTCAGTTTTAAGAACGACAACAA 58.100 32.000 0.00 0.00 45.34 2.83
92 93 6.797995 TGTTCAGTTTTAAGAACGACAACAAC 59.202 34.615 0.00 0.00 45.34 3.32
93 94 6.730960 TCAGTTTTAAGAACGACAACAACT 57.269 33.333 0.00 0.00 0.00 3.16
94 95 7.830940 TCAGTTTTAAGAACGACAACAACTA 57.169 32.000 0.00 0.00 0.00 2.24
95 96 7.902032 TCAGTTTTAAGAACGACAACAACTAG 58.098 34.615 0.00 0.00 0.00 2.57
96 97 6.627671 CAGTTTTAAGAACGACAACAACTAGC 59.372 38.462 0.00 0.00 0.00 3.42
97 98 6.537660 AGTTTTAAGAACGACAACAACTAGCT 59.462 34.615 0.00 0.00 0.00 3.32
98 99 6.913873 TTTAAGAACGACAACAACTAGCTT 57.086 33.333 0.00 0.00 0.00 3.74
99 100 6.520792 TTAAGAACGACAACAACTAGCTTC 57.479 37.500 0.00 0.00 0.00 3.86
100 101 4.054780 AGAACGACAACAACTAGCTTCA 57.945 40.909 0.00 0.00 0.00 3.02
101 102 4.051922 AGAACGACAACAACTAGCTTCAG 58.948 43.478 0.00 0.00 0.00 3.02
102 103 3.728076 ACGACAACAACTAGCTTCAGA 57.272 42.857 0.00 0.00 0.00 3.27
103 104 3.643763 ACGACAACAACTAGCTTCAGAG 58.356 45.455 0.00 0.00 0.00 3.35
104 105 3.068307 ACGACAACAACTAGCTTCAGAGT 59.932 43.478 0.00 0.00 0.00 3.24
105 106 4.277672 ACGACAACAACTAGCTTCAGAGTA 59.722 41.667 0.00 0.00 0.00 2.59
106 107 4.854291 CGACAACAACTAGCTTCAGAGTAG 59.146 45.833 0.00 0.00 0.00 2.57
107 108 5.563085 CGACAACAACTAGCTTCAGAGTAGT 60.563 44.000 0.00 0.00 0.00 2.73
108 109 6.348295 CGACAACAACTAGCTTCAGAGTAGTA 60.348 42.308 0.00 0.00 0.00 1.82
109 110 6.679843 ACAACAACTAGCTTCAGAGTAGTAC 58.320 40.000 0.00 0.00 0.00 2.73
110 111 6.490721 ACAACAACTAGCTTCAGAGTAGTACT 59.509 38.462 1.37 1.37 0.00 2.73
111 112 7.014422 ACAACAACTAGCTTCAGAGTAGTACTT 59.986 37.037 0.00 0.00 0.00 2.24
112 113 7.527568 ACAACTAGCTTCAGAGTAGTACTTT 57.472 36.000 0.00 0.00 0.00 2.66
113 114 8.632906 ACAACTAGCTTCAGAGTAGTACTTTA 57.367 34.615 0.00 0.00 0.00 1.85
114 115 9.245481 ACAACTAGCTTCAGAGTAGTACTTTAT 57.755 33.333 0.00 0.00 0.00 1.40
139 140 6.944557 AATTATTAAAAGCGAACAAGTGGC 57.055 33.333 0.00 0.00 0.00 5.01
140 141 5.699097 TTATTAAAAGCGAACAAGTGGCT 57.301 34.783 0.00 0.00 39.01 4.75
142 143 2.208326 AAAAGCGAACAAGTGGCTTG 57.792 45.000 11.07 7.27 45.58 4.01
143 144 0.249031 AAAGCGAACAAGTGGCTTGC 60.249 50.000 11.07 0.00 45.58 4.01
144 145 2.392613 AAGCGAACAAGTGGCTTGCG 62.393 55.000 8.59 6.65 44.43 4.85
145 146 2.252260 CGAACAAGTGGCTTGCGG 59.748 61.111 8.59 0.00 44.43 5.69
146 147 2.542907 CGAACAAGTGGCTTGCGGT 61.543 57.895 8.59 0.00 44.43 5.68
147 148 1.733526 GAACAAGTGGCTTGCGGTT 59.266 52.632 8.59 0.00 44.43 4.44
148 149 0.102300 GAACAAGTGGCTTGCGGTTT 59.898 50.000 8.59 0.00 44.43 3.27
149 150 0.179113 AACAAGTGGCTTGCGGTTTG 60.179 50.000 8.59 0.00 44.43 2.93
150 151 1.034838 ACAAGTGGCTTGCGGTTTGA 61.035 50.000 8.59 0.00 44.43 2.69
151 152 0.314935 CAAGTGGCTTGCGGTTTGAT 59.685 50.000 0.00 0.00 34.63 2.57
152 153 1.539388 CAAGTGGCTTGCGGTTTGATA 59.461 47.619 0.00 0.00 34.63 2.15
153 154 1.904287 AGTGGCTTGCGGTTTGATAA 58.096 45.000 0.00 0.00 0.00 1.75
154 155 1.812571 AGTGGCTTGCGGTTTGATAAG 59.187 47.619 0.00 0.00 0.00 1.73
155 156 1.539827 GTGGCTTGCGGTTTGATAAGT 59.460 47.619 0.00 0.00 0.00 2.24
156 157 2.030274 GTGGCTTGCGGTTTGATAAGTT 60.030 45.455 0.00 0.00 0.00 2.66
157 158 2.030363 TGGCTTGCGGTTTGATAAGTTG 60.030 45.455 0.00 0.00 0.00 3.16
158 159 2.030274 GGCTTGCGGTTTGATAAGTTGT 60.030 45.455 0.00 0.00 0.00 3.32
159 160 3.189702 GGCTTGCGGTTTGATAAGTTGTA 59.810 43.478 0.00 0.00 0.00 2.41
160 161 4.142469 GGCTTGCGGTTTGATAAGTTGTAT 60.142 41.667 0.00 0.00 0.00 2.29
161 162 4.793216 GCTTGCGGTTTGATAAGTTGTATG 59.207 41.667 0.00 0.00 0.00 2.39
162 163 4.955925 TGCGGTTTGATAAGTTGTATGG 57.044 40.909 0.00 0.00 0.00 2.74
163 164 4.328536 TGCGGTTTGATAAGTTGTATGGT 58.671 39.130 0.00 0.00 0.00 3.55
164 165 4.155099 TGCGGTTTGATAAGTTGTATGGTG 59.845 41.667 0.00 0.00 0.00 4.17
165 166 4.438200 GCGGTTTGATAAGTTGTATGGTGG 60.438 45.833 0.00 0.00 0.00 4.61
166 167 4.438200 CGGTTTGATAAGTTGTATGGTGGC 60.438 45.833 0.00 0.00 0.00 5.01
167 168 4.461081 GGTTTGATAAGTTGTATGGTGGCA 59.539 41.667 0.00 0.00 0.00 4.92
168 169 5.127031 GGTTTGATAAGTTGTATGGTGGCAT 59.873 40.000 0.00 0.00 0.00 4.40
169 170 5.833406 TTGATAAGTTGTATGGTGGCATG 57.167 39.130 0.00 0.00 0.00 4.06
170 171 5.109500 TGATAAGTTGTATGGTGGCATGA 57.891 39.130 0.00 0.00 0.00 3.07
171 172 5.693961 TGATAAGTTGTATGGTGGCATGAT 58.306 37.500 0.00 0.00 0.00 2.45
172 173 5.532032 TGATAAGTTGTATGGTGGCATGATG 59.468 40.000 0.00 0.00 0.00 3.07
173 174 3.370840 AGTTGTATGGTGGCATGATGT 57.629 42.857 0.00 0.00 0.00 3.06
174 175 3.700538 AGTTGTATGGTGGCATGATGTT 58.299 40.909 0.00 0.00 0.00 2.71
175 176 4.088634 AGTTGTATGGTGGCATGATGTTT 58.911 39.130 0.00 0.00 0.00 2.83
176 177 4.158394 AGTTGTATGGTGGCATGATGTTTC 59.842 41.667 0.00 0.00 0.00 2.78
177 178 3.023119 TGTATGGTGGCATGATGTTTCC 58.977 45.455 0.00 0.00 0.00 3.13
178 179 1.105457 ATGGTGGCATGATGTTTCCG 58.895 50.000 0.00 0.00 0.00 4.30
179 180 0.251121 TGGTGGCATGATGTTTCCGT 60.251 50.000 0.00 0.00 0.00 4.69
180 181 1.003696 TGGTGGCATGATGTTTCCGTA 59.996 47.619 0.00 0.00 0.00 4.02
181 182 1.670811 GGTGGCATGATGTTTCCGTAG 59.329 52.381 0.00 0.00 0.00 3.51
182 183 2.627945 GTGGCATGATGTTTCCGTAGA 58.372 47.619 0.00 0.00 0.00 2.59
183 184 3.206150 GTGGCATGATGTTTCCGTAGAT 58.794 45.455 0.00 0.00 0.00 1.98
184 185 3.002656 GTGGCATGATGTTTCCGTAGATG 59.997 47.826 0.00 0.00 0.00 2.90
185 186 2.549754 GGCATGATGTTTCCGTAGATGG 59.450 50.000 0.00 0.00 0.00 3.51
186 187 2.549754 GCATGATGTTTCCGTAGATGGG 59.450 50.000 0.00 0.00 0.00 4.00
187 188 3.744214 GCATGATGTTTCCGTAGATGGGA 60.744 47.826 0.00 0.00 0.00 4.37
188 189 4.450976 CATGATGTTTCCGTAGATGGGAA 58.549 43.478 0.00 0.00 41.66 3.97
189 190 3.869065 TGATGTTTCCGTAGATGGGAAC 58.131 45.455 5.12 5.12 46.15 3.62
190 191 3.517901 TGATGTTTCCGTAGATGGGAACT 59.482 43.478 12.28 0.00 46.13 3.01
191 192 4.019681 TGATGTTTCCGTAGATGGGAACTT 60.020 41.667 12.28 6.74 46.13 2.66
192 193 4.360951 TGTTTCCGTAGATGGGAACTTT 57.639 40.909 12.28 0.00 46.13 2.66
193 194 4.721132 TGTTTCCGTAGATGGGAACTTTT 58.279 39.130 12.28 0.00 46.13 2.27
194 195 5.867330 TGTTTCCGTAGATGGGAACTTTTA 58.133 37.500 12.28 0.00 46.13 1.52
195 196 5.702209 TGTTTCCGTAGATGGGAACTTTTAC 59.298 40.000 12.28 0.00 46.13 2.01
196 197 5.750352 TTCCGTAGATGGGAACTTTTACT 57.250 39.130 0.00 0.00 38.60 2.24
197 198 5.750352 TCCGTAGATGGGAACTTTTACTT 57.250 39.130 0.00 0.00 0.00 2.24
198 199 5.727434 TCCGTAGATGGGAACTTTTACTTC 58.273 41.667 0.00 0.00 0.00 3.01
199 200 4.874396 CCGTAGATGGGAACTTTTACTTCC 59.126 45.833 0.00 0.00 37.10 3.46
200 201 4.565564 CGTAGATGGGAACTTTTACTTCCG 59.434 45.833 0.00 0.00 38.53 4.30
201 202 4.635699 AGATGGGAACTTTTACTTCCGT 57.364 40.909 0.00 0.00 38.53 4.69
202 203 4.576879 AGATGGGAACTTTTACTTCCGTC 58.423 43.478 0.00 0.00 38.53 4.79
203 204 4.286291 AGATGGGAACTTTTACTTCCGTCT 59.714 41.667 0.00 0.00 38.53 4.18
204 205 3.999046 TGGGAACTTTTACTTCCGTCTC 58.001 45.455 0.00 0.00 38.53 3.36
205 206 3.388676 TGGGAACTTTTACTTCCGTCTCA 59.611 43.478 0.00 0.00 38.53 3.27
206 207 4.041198 TGGGAACTTTTACTTCCGTCTCAT 59.959 41.667 0.00 0.00 38.53 2.90
207 208 4.392138 GGGAACTTTTACTTCCGTCTCATG 59.608 45.833 0.00 0.00 38.53 3.07
208 209 5.235516 GGAACTTTTACTTCCGTCTCATGA 58.764 41.667 0.00 0.00 0.00 3.07
209 210 5.348997 GGAACTTTTACTTCCGTCTCATGAG 59.651 44.000 17.07 17.07 0.00 2.90
210 211 5.470047 ACTTTTACTTCCGTCTCATGAGT 57.530 39.130 21.92 4.73 0.00 3.41
211 212 5.471257 ACTTTTACTTCCGTCTCATGAGTC 58.529 41.667 21.92 15.64 0.00 3.36
212 213 5.244178 ACTTTTACTTCCGTCTCATGAGTCT 59.756 40.000 21.92 3.54 0.00 3.24
213 214 4.703645 TTACTTCCGTCTCATGAGTCTG 57.296 45.455 21.92 13.11 0.00 3.51
214 215 2.796557 ACTTCCGTCTCATGAGTCTGA 58.203 47.619 21.92 15.16 0.00 3.27
215 216 3.157881 ACTTCCGTCTCATGAGTCTGAA 58.842 45.455 21.92 20.63 0.00 3.02
216 217 3.057174 ACTTCCGTCTCATGAGTCTGAAC 60.057 47.826 21.92 11.48 0.00 3.18
217 218 2.514803 TCCGTCTCATGAGTCTGAACA 58.485 47.619 21.92 0.00 0.00 3.18
218 219 2.890945 TCCGTCTCATGAGTCTGAACAA 59.109 45.455 21.92 0.00 0.00 2.83
219 220 3.057245 TCCGTCTCATGAGTCTGAACAAG 60.057 47.826 21.92 7.26 0.00 3.16
220 221 3.057245 CCGTCTCATGAGTCTGAACAAGA 60.057 47.826 21.92 0.00 0.00 3.02
221 222 4.550422 CGTCTCATGAGTCTGAACAAGAA 58.450 43.478 21.92 0.00 36.40 2.52
222 223 4.984785 CGTCTCATGAGTCTGAACAAGAAA 59.015 41.667 21.92 0.00 36.40 2.52
223 224 5.636965 CGTCTCATGAGTCTGAACAAGAAAT 59.363 40.000 21.92 0.00 36.40 2.17
224 225 6.808704 CGTCTCATGAGTCTGAACAAGAAATA 59.191 38.462 21.92 0.00 36.40 1.40
225 226 7.490725 CGTCTCATGAGTCTGAACAAGAAATAT 59.509 37.037 21.92 0.00 36.40 1.28
226 227 9.809096 GTCTCATGAGTCTGAACAAGAAATATA 57.191 33.333 21.92 0.00 36.40 0.86
228 229 9.258826 CTCATGAGTCTGAACAAGAAATATAGG 57.741 37.037 14.95 0.00 36.40 2.57
229 230 8.762645 TCATGAGTCTGAACAAGAAATATAGGT 58.237 33.333 0.00 0.00 36.40 3.08
230 231 9.388506 CATGAGTCTGAACAAGAAATATAGGTT 57.611 33.333 0.00 0.00 36.40 3.50
231 232 9.965902 ATGAGTCTGAACAAGAAATATAGGTTT 57.034 29.630 0.00 0.00 36.40 3.27
232 233 9.793259 TGAGTCTGAACAAGAAATATAGGTTTT 57.207 29.630 0.00 0.00 36.40 2.43
234 235 9.574516 AGTCTGAACAAGAAATATAGGTTTTGT 57.425 29.630 0.00 0.00 36.40 2.83
241 242 9.744468 ACAAGAAATATAGGTTTTGTTTGACAC 57.256 29.630 0.00 0.00 0.00 3.67
242 243 9.191995 CAAGAAATATAGGTTTTGTTTGACACC 57.808 33.333 0.00 0.00 0.00 4.16
243 244 8.706322 AGAAATATAGGTTTTGTTTGACACCT 57.294 30.769 0.00 0.00 0.00 4.00
244 245 9.143155 AGAAATATAGGTTTTGTTTGACACCTT 57.857 29.630 0.00 0.00 0.00 3.50
245 246 9.406828 GAAATATAGGTTTTGTTTGACACCTTC 57.593 33.333 0.00 0.00 0.00 3.46
246 247 3.775661 AGGTTTTGTTTGACACCTTCG 57.224 42.857 0.00 0.00 0.00 3.79
247 248 2.159296 AGGTTTTGTTTGACACCTTCGC 60.159 45.455 0.00 0.00 0.00 4.70
248 249 2.190161 GTTTTGTTTGACACCTTCGCC 58.810 47.619 0.00 0.00 0.00 5.54
249 250 1.464734 TTTGTTTGACACCTTCGCCA 58.535 45.000 0.00 0.00 0.00 5.69
250 251 1.464734 TTGTTTGACACCTTCGCCAA 58.535 45.000 0.00 0.00 0.00 4.52
251 252 1.686355 TGTTTGACACCTTCGCCAAT 58.314 45.000 0.00 0.00 0.00 3.16
252 253 2.028130 TGTTTGACACCTTCGCCAATT 58.972 42.857 0.00 0.00 0.00 2.32
253 254 2.428890 TGTTTGACACCTTCGCCAATTT 59.571 40.909 0.00 0.00 0.00 1.82
254 255 3.118956 TGTTTGACACCTTCGCCAATTTT 60.119 39.130 0.00 0.00 0.00 1.82
255 256 2.791383 TGACACCTTCGCCAATTTTG 57.209 45.000 0.00 0.00 0.00 2.44
256 257 1.269517 TGACACCTTCGCCAATTTTGC 60.270 47.619 0.00 0.00 0.00 3.68
257 258 0.749649 ACACCTTCGCCAATTTTGCA 59.250 45.000 0.00 0.00 0.00 4.08
258 259 1.139163 CACCTTCGCCAATTTTGCAC 58.861 50.000 0.00 0.00 0.00 4.57
259 260 1.039856 ACCTTCGCCAATTTTGCACT 58.960 45.000 0.00 0.00 0.00 4.40
260 261 1.412343 ACCTTCGCCAATTTTGCACTT 59.588 42.857 0.00 0.00 0.00 3.16
261 262 2.158971 ACCTTCGCCAATTTTGCACTTT 60.159 40.909 0.00 0.00 0.00 2.66
262 263 2.871633 CCTTCGCCAATTTTGCACTTTT 59.128 40.909 0.00 0.00 0.00 2.27
263 264 4.054671 CCTTCGCCAATTTTGCACTTTTA 58.945 39.130 0.00 0.00 0.00 1.52
264 265 4.690280 CCTTCGCCAATTTTGCACTTTTAT 59.310 37.500 0.00 0.00 0.00 1.40
265 266 5.179182 CCTTCGCCAATTTTGCACTTTTATT 59.821 36.000 0.00 0.00 0.00 1.40
266 267 6.367422 CCTTCGCCAATTTTGCACTTTTATTA 59.633 34.615 0.00 0.00 0.00 0.98
267 268 7.095439 CCTTCGCCAATTTTGCACTTTTATTAA 60.095 33.333 0.00 0.00 0.00 1.40
268 269 7.715265 TCGCCAATTTTGCACTTTTATTAAA 57.285 28.000 0.00 0.00 0.00 1.52
269 270 8.142994 TCGCCAATTTTGCACTTTTATTAAAA 57.857 26.923 1.85 1.85 0.00 1.52
289 290 8.940397 TTAAAAGTTCATTCTCCATTTCTCCT 57.060 30.769 0.00 0.00 0.00 3.69
291 292 8.572855 AAAAGTTCATTCTCCATTTCTCCTAG 57.427 34.615 0.00 0.00 0.00 3.02
292 293 6.882768 AGTTCATTCTCCATTTCTCCTAGT 57.117 37.500 0.00 0.00 0.00 2.57
293 294 7.979786 AGTTCATTCTCCATTTCTCCTAGTA 57.020 36.000 0.00 0.00 0.00 1.82
294 295 8.560124 AGTTCATTCTCCATTTCTCCTAGTAT 57.440 34.615 0.00 0.00 0.00 2.12
295 296 8.997734 AGTTCATTCTCCATTTCTCCTAGTATT 58.002 33.333 0.00 0.00 0.00 1.89
345 346 4.141711 TGAATGGCTAATCTTTACTCGCCT 60.142 41.667 0.00 0.00 38.33 5.52
366 367 5.690857 GCCTCTACCGTAAAACATCTCATAC 59.309 44.000 0.00 0.00 0.00 2.39
371 372 6.963049 ACCGTAAAACATCTCATACTTGAC 57.037 37.500 0.00 0.00 0.00 3.18
372 373 6.460781 ACCGTAAAACATCTCATACTTGACA 58.539 36.000 0.00 0.00 0.00 3.58
376 377 6.808008 AAAACATCTCATACTTGACACCTG 57.192 37.500 0.00 0.00 0.00 4.00
377 378 4.478206 ACATCTCATACTTGACACCTGG 57.522 45.455 0.00 0.00 0.00 4.45
380 381 4.271696 TCTCATACTTGACACCTGGTTG 57.728 45.455 0.00 0.00 0.00 3.77
381 382 3.007940 TCTCATACTTGACACCTGGTTGG 59.992 47.826 0.00 0.00 42.93 3.77
394 395 1.681264 CTGGTTGGTTTCCTGTGGAAC 59.319 52.381 0.00 0.00 41.87 3.62
405 406 4.811969 TCCTGTGGAACGTATACACAAT 57.188 40.909 17.01 0.00 43.67 2.71
439 442 7.010923 GCTTGACTAGTTGACCTATCATTCTTG 59.989 40.741 0.00 0.00 33.85 3.02
444 447 5.809001 AGTTGACCTATCATTCTTGCAAGA 58.191 37.500 25.16 25.16 33.85 3.02
456 468 3.916761 TCTTGCAAGAAAATGATGCCAC 58.083 40.909 26.61 0.00 39.31 5.01
459 471 1.202114 GCAAGAAAATGATGCCACGGA 59.798 47.619 0.00 0.00 34.03 4.69
460 472 2.352617 GCAAGAAAATGATGCCACGGAA 60.353 45.455 0.00 0.00 34.03 4.30
477 489 1.339535 GGAAGGAAGGGTTGAGCAGAG 60.340 57.143 0.00 0.00 0.00 3.35
478 490 0.037447 AAGGAAGGGTTGAGCAGAGC 59.963 55.000 0.00 0.00 0.00 4.09
479 491 1.130054 AGGAAGGGTTGAGCAGAGCA 61.130 55.000 0.00 0.00 0.00 4.26
480 492 0.676151 GGAAGGGTTGAGCAGAGCAG 60.676 60.000 0.00 0.00 0.00 4.24
481 493 0.322975 GAAGGGTTGAGCAGAGCAGA 59.677 55.000 0.00 0.00 0.00 4.26
482 494 0.036022 AAGGGTTGAGCAGAGCAGAC 59.964 55.000 0.00 0.00 0.00 3.51
483 495 1.739562 GGGTTGAGCAGAGCAGACG 60.740 63.158 0.00 0.00 0.00 4.18
484 496 2.386660 GGTTGAGCAGAGCAGACGC 61.387 63.158 0.00 0.00 38.99 5.19
491 503 4.521062 AGAGCAGACGCCCGATGC 62.521 66.667 12.30 12.30 39.83 3.91
495 507 2.279120 CAGACGCCCGATGCTCTC 60.279 66.667 0.00 0.00 38.05 3.20
525 537 9.905713 ATGGAGATTTTCTACAAGCATTACTTA 57.094 29.630 0.00 0.00 41.39 2.24
574 586 6.779117 AGTATTTGATGCATTTCGAGACTTG 58.221 36.000 0.00 0.00 0.00 3.16
577 589 5.885230 TTGATGCATTTCGAGACTTGAAT 57.115 34.783 0.00 0.00 0.00 2.57
586 598 9.214953 GCATTTCGAGACTTGAATATTTAGTTG 57.785 33.333 5.96 1.53 0.00 3.16
592 604 8.050750 CGAGACTTGAATATTTAGTTGTAAGCG 58.949 37.037 5.85 0.00 0.00 4.68
593 605 7.685594 AGACTTGAATATTTAGTTGTAAGCGC 58.314 34.615 0.00 0.00 0.00 5.92
594 606 6.782150 ACTTGAATATTTAGTTGTAAGCGCC 58.218 36.000 2.29 0.00 0.00 6.53
595 607 6.598064 ACTTGAATATTTAGTTGTAAGCGCCT 59.402 34.615 2.29 0.00 0.00 5.52
597 609 7.709269 TGAATATTTAGTTGTAAGCGCCTAG 57.291 36.000 2.29 0.00 0.00 3.02
598 610 7.270047 TGAATATTTAGTTGTAAGCGCCTAGT 58.730 34.615 2.29 0.00 0.00 2.57
599 611 7.437267 TGAATATTTAGTTGTAAGCGCCTAGTC 59.563 37.037 2.29 0.00 0.00 2.59
600 612 4.524316 TTTAGTTGTAAGCGCCTAGTCA 57.476 40.909 2.29 0.00 0.00 3.41
601 613 2.656560 AGTTGTAAGCGCCTAGTCAG 57.343 50.000 2.29 0.00 0.00 3.51
602 614 1.893801 AGTTGTAAGCGCCTAGTCAGT 59.106 47.619 2.29 0.00 0.00 3.41
604 616 1.541379 TGTAAGCGCCTAGTCAGTCA 58.459 50.000 2.29 0.00 0.00 3.41
606 618 2.260481 GTAAGCGCCTAGTCAGTCAAC 58.740 52.381 2.29 0.00 0.00 3.18
607 619 0.679505 AAGCGCCTAGTCAGTCAACA 59.320 50.000 2.29 0.00 0.00 3.33
608 620 0.898320 AGCGCCTAGTCAGTCAACAT 59.102 50.000 2.29 0.00 0.00 2.71
609 621 1.002366 GCGCCTAGTCAGTCAACATG 58.998 55.000 0.00 0.00 0.00 3.21
610 622 1.673033 GCGCCTAGTCAGTCAACATGT 60.673 52.381 0.00 0.00 0.00 3.21
611 623 2.416836 GCGCCTAGTCAGTCAACATGTA 60.417 50.000 0.00 0.00 0.00 2.29
612 624 3.439293 CGCCTAGTCAGTCAACATGTAG 58.561 50.000 0.00 0.00 0.00 2.74
613 625 3.735208 CGCCTAGTCAGTCAACATGTAGG 60.735 52.174 0.00 0.00 0.00 3.18
614 626 3.195825 GCCTAGTCAGTCAACATGTAGGT 59.804 47.826 0.00 0.00 0.00 3.08
615 627 4.748892 CCTAGTCAGTCAACATGTAGGTG 58.251 47.826 0.00 0.00 35.78 4.00
637 2382 6.092259 GGTGACATTTAGTTGTAAGCACCTAG 59.908 42.308 0.00 0.00 39.96 3.02
639 2384 6.872020 TGACATTTAGTTGTAAGCACCTAGTC 59.128 38.462 0.00 0.00 0.00 2.59
640 2385 6.765403 ACATTTAGTTGTAAGCACCTAGTCA 58.235 36.000 0.00 0.00 0.00 3.41
641 2386 6.874134 ACATTTAGTTGTAAGCACCTAGTCAG 59.126 38.462 0.00 0.00 0.00 3.51
643 2388 4.522722 AGTTGTAAGCACCTAGTCAGTC 57.477 45.455 0.00 0.00 0.00 3.51
644 2389 3.895656 AGTTGTAAGCACCTAGTCAGTCA 59.104 43.478 0.00 0.00 0.00 3.41
664 2409 4.412843 TCAACATGTAGGTGACCAGACTA 58.587 43.478 3.63 0.00 39.57 2.59
676 2421 4.645136 GTGACCAGACTATACTGTCCATGA 59.355 45.833 0.00 0.00 37.66 3.07
677 2422 5.303078 GTGACCAGACTATACTGTCCATGAT 59.697 44.000 0.00 0.00 37.66 2.45
678 2423 5.302823 TGACCAGACTATACTGTCCATGATG 59.697 44.000 0.00 0.00 37.66 3.07
679 2424 5.458595 ACCAGACTATACTGTCCATGATGA 58.541 41.667 0.00 0.00 37.66 2.92
705 2450 8.821686 TGGTGTTTATGAAAATCCATCATACT 57.178 30.769 0.00 0.00 38.99 2.12
713 2458 8.701908 ATGAAAATCCATCATACTTACATGCT 57.298 30.769 0.00 0.00 35.80 3.79
714 2459 7.933396 TGAAAATCCATCATACTTACATGCTG 58.067 34.615 0.00 0.00 0.00 4.41
726 2471 1.229428 ACATGCTGGTGTGAGAAACG 58.771 50.000 0.00 0.00 0.00 3.60
728 2473 0.396435 ATGCTGGTGTGAGAAACGGA 59.604 50.000 0.00 0.00 0.00 4.69
731 2476 1.937108 GCTGGTGTGAGAAACGGAGAG 60.937 57.143 0.00 0.00 0.00 3.20
734 2479 1.140816 GTGTGAGAAACGGAGAGCAC 58.859 55.000 0.00 0.00 0.00 4.40
736 2481 1.269778 TGTGAGAAACGGAGAGCACAG 60.270 52.381 0.00 0.00 33.00 3.66
778 2525 2.028294 TGCAAATGTTACAAGGGGCATG 60.028 45.455 0.00 0.00 0.00 4.06
779 2526 2.620242 CAAATGTTACAAGGGGCATGC 58.380 47.619 9.90 9.90 0.00 4.06
821 2580 2.289072 CCCTATAGATCCAACGCACCAG 60.289 54.545 0.00 0.00 0.00 4.00
844 2603 1.084370 GTCCAGCAGCACCGTATCAC 61.084 60.000 0.00 0.00 0.00 3.06
846 2605 2.167219 CAGCAGCACCGTATCACCG 61.167 63.158 0.00 0.00 0.00 4.94
851 2610 0.821517 AGCACCGTATCACCGAATGA 59.178 50.000 0.00 0.00 43.13 2.57
855 2614 2.032894 CACCGTATCACCGAATGAATGC 60.033 50.000 0.00 0.00 41.93 3.56
925 2684 0.098200 GCGCAAAATACTCCCGTTCC 59.902 55.000 0.30 0.00 0.00 3.62
948 2707 0.402861 TCCAAACTCCAAGACCCCCT 60.403 55.000 0.00 0.00 0.00 4.79
950 2709 1.133167 CCAAACTCCAAGACCCCCTTT 60.133 52.381 0.00 0.00 31.42 3.11
951 2710 2.239400 CAAACTCCAAGACCCCCTTTC 58.761 52.381 0.00 0.00 31.42 2.62
952 2711 0.778083 AACTCCAAGACCCCCTTTCC 59.222 55.000 0.00 0.00 31.42 3.13
953 2712 1.299976 CTCCAAGACCCCCTTTCCG 59.700 63.158 0.00 0.00 31.42 4.30
963 2722 0.321653 CCCCTTTCCGTCCTCTTGTG 60.322 60.000 0.00 0.00 0.00 3.33
1208 2982 2.695970 CCTCCTCCTCCTCGTCCCT 61.696 68.421 0.00 0.00 0.00 4.20
1446 3220 2.125512 GACAACATCGAGCGCCCT 60.126 61.111 2.29 0.00 0.00 5.19
1692 3466 1.777272 GGGTTAGGGATCCAGAGCATT 59.223 52.381 15.23 0.00 0.00 3.56
1811 3606 4.207891 TGTTACTTGAAGGCCTCAGATC 57.792 45.455 5.23 0.00 34.81 2.75
1907 3798 9.180678 GGTAATGTTGTTTTCTCATGTTTACAG 57.819 33.333 0.00 0.00 0.00 2.74
1941 3832 6.714810 AGTTTCAGTGGCTGTTTCATTGTATA 59.285 34.615 0.00 0.00 32.61 1.47
1968 3859 2.009774 CTGGGAACTAACGGATTGCAG 58.990 52.381 0.00 0.00 0.00 4.41
2086 4009 5.656416 TCCCATCTTTAGCTAATTGGTTTGG 59.344 40.000 20.56 15.20 0.00 3.28
2087 4010 5.422012 CCCATCTTTAGCTAATTGGTTTGGT 59.578 40.000 20.56 0.00 0.00 3.67
2401 4376 3.909732 TCTGGTCCTGGTTTCATGTTTT 58.090 40.909 0.00 0.00 0.00 2.43
2663 4643 4.144297 TCCTATTTGTCTGGCATAATGGC 58.856 43.478 0.00 0.00 44.03 4.40
2675 4655 3.871006 GGCATAATGGCAACCTTAAAAGC 59.129 43.478 0.00 0.00 43.14 3.51
2708 4688 1.669115 CCAGTTCGGTGCAGGTCTG 60.669 63.158 0.00 0.00 0.00 3.51
2743 4723 5.013704 TCAGTAGAAGTATTTTCCCTTGCCA 59.986 40.000 0.00 0.00 0.00 4.92
2747 4727 3.961480 AGTATTTTCCCTTGCCAAAGC 57.039 42.857 0.00 0.00 40.48 3.51
2765 4745 6.345803 GCCAAAGCGAAAATTGAGTAAAGAAC 60.346 38.462 0.00 0.00 0.00 3.01
2787 4767 6.015268 ACAAAATTTCACGTTTTGCTTACG 57.985 33.333 9.07 0.00 45.70 3.18
3126 5138 4.479993 ACCTGCGCCATCTGCCTC 62.480 66.667 4.18 0.00 36.24 4.70
3274 5286 2.882137 GGTTGCACTACAAAGCTAACCA 59.118 45.455 4.70 0.00 40.82 3.67
3726 5754 9.077674 GCATATCTATCTTTACCGATGTTACTG 57.922 37.037 0.00 0.00 0.00 2.74
3784 5882 1.999648 TCCCTGCTGATGTGCTTTTT 58.000 45.000 0.00 0.00 0.00 1.94
3840 5938 2.034053 TGTTTGACCTTTTCGTGCATCC 59.966 45.455 0.00 0.00 0.00 3.51
3986 6084 3.646946 CATGGAAGATGACGATGACGAT 58.353 45.455 0.00 0.00 42.66 3.73
3989 6087 3.319122 TGGAAGATGACGATGACGATGAT 59.681 43.478 0.00 0.00 42.66 2.45
3990 6088 3.672397 GGAAGATGACGATGACGATGATG 59.328 47.826 0.00 0.00 42.66 3.07
4004 6102 5.040715 ACGATGATGATGACTACGATGAG 57.959 43.478 0.00 0.00 0.00 2.90
4050 6151 5.083122 ACGATGAGGATGAGGATGATTACT 58.917 41.667 0.00 0.00 0.00 2.24
4051 6152 6.249192 ACGATGAGGATGAGGATGATTACTA 58.751 40.000 0.00 0.00 0.00 1.82
4052 6153 6.151985 ACGATGAGGATGAGGATGATTACTAC 59.848 42.308 0.00 0.00 0.00 2.73
4053 6154 6.376864 CGATGAGGATGAGGATGATTACTACT 59.623 42.308 0.00 0.00 0.00 2.57
4054 6155 7.415095 CGATGAGGATGAGGATGATTACTACTC 60.415 44.444 0.00 0.00 0.00 2.59
4055 6156 6.013379 TGAGGATGAGGATGATTACTACTCC 58.987 44.000 0.00 0.00 0.00 3.85
4056 6157 5.337788 AGGATGAGGATGATTACTACTCCC 58.662 45.833 0.00 0.00 0.00 4.30
4057 6158 5.077159 AGGATGAGGATGATTACTACTCCCT 59.923 44.000 0.00 0.00 0.00 4.20
4058 6159 5.420739 GGATGAGGATGATTACTACTCCCTC 59.579 48.000 0.00 0.00 39.20 4.30
4059 6160 4.742012 TGAGGATGATTACTACTCCCTCC 58.258 47.826 0.00 0.00 38.27 4.30
4060 6161 3.759618 GAGGATGATTACTACTCCCTCCG 59.240 52.174 0.00 0.00 34.25 4.63
4061 6162 3.140519 AGGATGATTACTACTCCCTCCGT 59.859 47.826 0.00 0.00 0.00 4.69
4062 6163 3.506844 GGATGATTACTACTCCCTCCGTC 59.493 52.174 0.00 0.00 0.00 4.79
4063 6164 2.941480 TGATTACTACTCCCTCCGTCC 58.059 52.381 0.00 0.00 0.00 4.79
4064 6165 2.237643 GATTACTACTCCCTCCGTCCC 58.762 57.143 0.00 0.00 0.00 4.46
4065 6166 1.002069 TTACTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
4066 6167 1.229131 TACTACTCCCTCCGTCCCAT 58.771 55.000 0.00 0.00 0.00 4.00
4067 6168 1.229131 ACTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
4068 6169 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
4069 6170 2.179424 ACTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
4070 6171 3.400322 ACTACTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
4071 6172 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
4072 6173 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
4073 6174 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
4074 6175 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
4075 6176 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
4076 6177 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
4077 6178 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
4078 6179 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
4079 6180 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
4080 6181 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
4081 6182 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
4082 6183 7.274447 TCCGTCCCATAATATAAGAACGTTTT 58.726 34.615 0.46 0.00 0.00 2.43
4083 6184 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
4084 6185 7.853929 CCGTCCCATAATATAAGAACGTTTTTG 59.146 37.037 13.87 0.00 0.00 2.44
4085 6186 8.605746 CGTCCCATAATATAAGAACGTTTTTGA 58.394 33.333 13.87 2.81 0.00 2.69
4086 6187 9.712359 GTCCCATAATATAAGAACGTTTTTGAC 57.288 33.333 13.87 5.89 0.00 3.18
4087 6188 9.451002 TCCCATAATATAAGAACGTTTTTGACA 57.549 29.630 13.87 0.01 0.00 3.58
4088 6189 9.498307 CCCATAATATAAGAACGTTTTTGACAC 57.502 33.333 13.87 0.00 0.00 3.67
4100 6201 5.106078 ACGTTTTTGACACTAATGTGGTGTT 60.106 36.000 0.00 0.00 46.23 3.32
4101 6202 6.093771 ACGTTTTTGACACTAATGTGGTGTTA 59.906 34.615 0.00 0.00 46.23 2.41
4102 6203 6.967767 CGTTTTTGACACTAATGTGGTGTTAA 59.032 34.615 0.00 0.00 46.23 2.01
4103 6204 7.485277 CGTTTTTGACACTAATGTGGTGTTAAA 59.515 33.333 9.67 9.67 46.23 1.52
4106 6207 8.690680 TTTGACACTAATGTGGTGTTAAAAAC 57.309 30.769 10.85 0.00 46.23 2.43
4107 6208 6.487960 TGACACTAATGTGGTGTTAAAAACG 58.512 36.000 0.00 0.00 46.23 3.60
4108 6209 6.093771 TGACACTAATGTGGTGTTAAAAACGT 59.906 34.615 0.00 0.00 46.23 3.99
4109 6210 6.968335 GACACTAATGTGGTGTTAAAAACGTT 59.032 34.615 0.00 0.00 46.23 3.99
4110 6211 7.164662 GACACTAATGTGGTGTTAAAAACGTTC 59.835 37.037 0.00 0.00 46.23 3.95
4111 6212 7.190871 CACTAATGTGGTGTTAAAAACGTTCT 58.809 34.615 0.00 0.00 40.33 3.01
4112 6213 7.698970 CACTAATGTGGTGTTAAAAACGTTCTT 59.301 33.333 0.00 0.00 40.33 2.52
4113 6214 8.891720 ACTAATGTGGTGTTAAAAACGTTCTTA 58.108 29.630 0.00 0.00 0.00 2.10
4114 6215 9.887406 CTAATGTGGTGTTAAAAACGTTCTTAT 57.113 29.630 0.00 0.00 0.00 1.73
4127 6228 7.989416 AAACGTTCTTATATTTTGGGACAGA 57.011 32.000 0.00 0.00 42.39 3.41
4128 6229 7.611213 AACGTTCTTATATTTTGGGACAGAG 57.389 36.000 0.00 0.00 42.39 3.35
4129 6230 6.113411 ACGTTCTTATATTTTGGGACAGAGG 58.887 40.000 0.00 0.00 42.39 3.69
4130 6231 5.527582 CGTTCTTATATTTTGGGACAGAGGG 59.472 44.000 0.00 0.00 42.39 4.30
4131 6232 6.631766 CGTTCTTATATTTTGGGACAGAGGGA 60.632 42.308 0.00 0.00 42.39 4.20
4132 6233 6.500589 TCTTATATTTTGGGACAGAGGGAG 57.499 41.667 0.00 0.00 42.39 4.30
4165 6266 0.748005 GCCAACACTATGACCGGCAT 60.748 55.000 14.43 14.43 39.38 4.40
4229 6330 6.489127 TTTATGACTACAACAACAATCCCG 57.511 37.500 0.00 0.00 0.00 5.14
4262 6426 4.815973 ATGGCGGTGGAGGGGCTA 62.816 66.667 0.00 0.00 0.00 3.93
4275 6439 4.164221 TGGAGGGGCTAGAAATTTCTACAG 59.836 45.833 21.46 16.45 38.70 2.74
4319 6483 3.996363 TGCAGCTACAACTGATGTTACTG 59.004 43.478 12.55 12.55 43.63 2.74
4343 6507 4.657436 AGTTAAGCAGAATCTCCTACCG 57.343 45.455 0.00 0.00 0.00 4.02
4398 6562 2.594131 TGATGGTACTATCCCGTCAGG 58.406 52.381 15.79 0.00 41.86 3.86
4399 6563 1.272769 GATGGTACTATCCCGTCAGGC 59.727 57.143 7.97 0.00 37.83 4.85
4400 6564 1.105167 TGGTACTATCCCGTCAGGCG 61.105 60.000 0.00 0.00 40.95 5.52
4401 6565 1.007618 GTACTATCCCGTCAGGCGC 60.008 63.158 0.00 0.00 39.71 6.53
4402 6566 1.454295 TACTATCCCGTCAGGCGCA 60.454 57.895 10.83 0.00 39.71 6.09
4403 6567 1.731433 TACTATCCCGTCAGGCGCAC 61.731 60.000 10.83 0.00 39.71 5.34
4404 6568 3.071837 TATCCCGTCAGGCGCACA 61.072 61.111 10.83 0.00 39.71 4.57
4405 6569 2.369257 CTATCCCGTCAGGCGCACAT 62.369 60.000 10.83 0.00 39.71 3.21
4406 6570 2.642996 TATCCCGTCAGGCGCACATG 62.643 60.000 10.83 4.75 39.71 3.21
4407 6571 4.758251 CCCGTCAGGCGCACATGA 62.758 66.667 10.83 7.49 39.71 3.07
4408 6572 2.741985 CCGTCAGGCGCACATGAA 60.742 61.111 10.83 0.00 39.71 2.57
4409 6573 2.476051 CGTCAGGCGCACATGAAC 59.524 61.111 10.83 4.66 0.00 3.18
4410 6574 2.029288 CGTCAGGCGCACATGAACT 61.029 57.895 10.83 0.00 0.00 3.01
4411 6575 1.568612 CGTCAGGCGCACATGAACTT 61.569 55.000 10.83 0.00 0.00 2.66
4412 6576 1.438651 GTCAGGCGCACATGAACTTA 58.561 50.000 10.83 0.00 0.00 2.24
4413 6577 1.394917 GTCAGGCGCACATGAACTTAG 59.605 52.381 10.83 0.00 0.00 2.18
4414 6578 0.729116 CAGGCGCACATGAACTTAGG 59.271 55.000 10.83 0.00 0.00 2.69
4415 6579 1.026718 AGGCGCACATGAACTTAGGC 61.027 55.000 10.83 0.00 0.00 3.93
4416 6580 1.305219 GGCGCACATGAACTTAGGCA 61.305 55.000 10.83 0.00 0.00 4.75
4417 6581 0.521291 GCGCACATGAACTTAGGCAA 59.479 50.000 0.30 0.00 0.00 4.52
4418 6582 1.466360 GCGCACATGAACTTAGGCAAG 60.466 52.381 0.30 0.00 37.81 4.01
4419 6583 1.131126 CGCACATGAACTTAGGCAAGG 59.869 52.381 0.00 0.00 35.97 3.61
4420 6584 1.135286 GCACATGAACTTAGGCAAGGC 60.135 52.381 0.00 0.00 35.97 4.35
4421 6585 2.161855 CACATGAACTTAGGCAAGGCA 58.838 47.619 0.00 0.00 35.97 4.75
4422 6586 2.557924 CACATGAACTTAGGCAAGGCAA 59.442 45.455 0.00 0.00 35.97 4.52
4423 6587 2.821969 ACATGAACTTAGGCAAGGCAAG 59.178 45.455 0.00 1.01 35.97 4.01
4424 6588 1.909700 TGAACTTAGGCAAGGCAAGG 58.090 50.000 0.00 0.00 35.97 3.61
4425 6589 0.528017 GAACTTAGGCAAGGCAAGGC 59.472 55.000 0.00 0.00 35.97 4.35
4426 6590 0.178964 AACTTAGGCAAGGCAAGGCA 60.179 50.000 5.62 0.00 35.97 4.75
4427 6591 0.178964 ACTTAGGCAAGGCAAGGCAA 60.179 50.000 5.62 0.00 35.97 4.52
4428 6592 0.968405 CTTAGGCAAGGCAAGGCAAA 59.032 50.000 5.62 0.00 0.00 3.68
4429 6593 1.551883 CTTAGGCAAGGCAAGGCAAAT 59.448 47.619 5.62 0.00 0.00 2.32
4430 6594 1.643310 TAGGCAAGGCAAGGCAAATT 58.357 45.000 5.62 0.00 0.00 1.82
4431 6595 1.643310 AGGCAAGGCAAGGCAAATTA 58.357 45.000 5.62 0.00 0.00 1.40
4432 6596 1.551883 AGGCAAGGCAAGGCAAATTAG 59.448 47.619 5.62 0.00 0.00 1.73
4433 6597 1.276138 GGCAAGGCAAGGCAAATTAGT 59.724 47.619 0.00 0.00 0.00 2.24
4434 6598 2.495669 GGCAAGGCAAGGCAAATTAGTA 59.504 45.455 0.00 0.00 0.00 1.82
4435 6599 3.132824 GGCAAGGCAAGGCAAATTAGTAT 59.867 43.478 0.00 0.00 0.00 2.12
4436 6600 4.114794 GCAAGGCAAGGCAAATTAGTATG 58.885 43.478 0.00 0.00 0.00 2.39
4437 6601 4.142182 GCAAGGCAAGGCAAATTAGTATGA 60.142 41.667 0.00 0.00 0.00 2.15
4438 6602 5.585390 CAAGGCAAGGCAAATTAGTATGAG 58.415 41.667 0.00 0.00 0.00 2.90
4439 6603 4.860022 AGGCAAGGCAAATTAGTATGAGT 58.140 39.130 0.00 0.00 0.00 3.41
4440 6604 4.641989 AGGCAAGGCAAATTAGTATGAGTG 59.358 41.667 0.00 0.00 0.00 3.51
4441 6605 4.640201 GGCAAGGCAAATTAGTATGAGTGA 59.360 41.667 0.00 0.00 0.00 3.41
4442 6606 5.125417 GGCAAGGCAAATTAGTATGAGTGAA 59.875 40.000 0.00 0.00 0.00 3.18
4443 6607 6.030228 GCAAGGCAAATTAGTATGAGTGAAC 58.970 40.000 0.00 0.00 0.00 3.18
4444 6608 6.250819 CAAGGCAAATTAGTATGAGTGAACG 58.749 40.000 0.00 0.00 0.00 3.95
4445 6609 5.488341 AGGCAAATTAGTATGAGTGAACGT 58.512 37.500 0.00 0.00 0.00 3.99
4446 6610 5.938125 AGGCAAATTAGTATGAGTGAACGTT 59.062 36.000 0.00 0.00 0.00 3.99
4447 6611 6.021596 GGCAAATTAGTATGAGTGAACGTTG 58.978 40.000 5.00 0.00 0.00 4.10
4448 6612 6.021596 GCAAATTAGTATGAGTGAACGTTGG 58.978 40.000 5.00 0.00 0.00 3.77
4449 6613 6.348213 GCAAATTAGTATGAGTGAACGTTGGT 60.348 38.462 5.00 0.00 0.00 3.67
4450 6614 7.581476 CAAATTAGTATGAGTGAACGTTGGTT 58.419 34.615 5.00 0.00 39.63 3.67
4451 6615 7.739498 AATTAGTATGAGTGAACGTTGGTTT 57.261 32.000 5.00 0.00 36.24 3.27
4452 6616 7.739498 ATTAGTATGAGTGAACGTTGGTTTT 57.261 32.000 5.00 0.00 36.24 2.43
4453 6617 7.556733 TTAGTATGAGTGAACGTTGGTTTTT 57.443 32.000 5.00 0.00 36.24 1.94
4454 6618 5.816919 AGTATGAGTGAACGTTGGTTTTTG 58.183 37.500 5.00 0.00 36.24 2.44
4455 6619 2.869897 TGAGTGAACGTTGGTTTTTGC 58.130 42.857 5.00 0.00 36.24 3.68
4456 6620 2.229062 TGAGTGAACGTTGGTTTTTGCA 59.771 40.909 5.00 0.00 36.24 4.08
4457 6621 2.596862 GAGTGAACGTTGGTTTTTGCAC 59.403 45.455 5.00 4.86 36.24 4.57
4458 6622 2.029828 AGTGAACGTTGGTTTTTGCACA 60.030 40.909 5.00 0.00 36.24 4.57
4459 6623 2.926838 GTGAACGTTGGTTTTTGCACAT 59.073 40.909 5.00 0.00 36.24 3.21
4460 6624 2.926200 TGAACGTTGGTTTTTGCACATG 59.074 40.909 5.00 0.00 36.24 3.21
4461 6625 1.933247 ACGTTGGTTTTTGCACATGG 58.067 45.000 0.00 0.00 0.00 3.66
4462 6626 0.581053 CGTTGGTTTTTGCACATGGC 59.419 50.000 0.00 0.00 45.13 4.40
4463 6627 0.943673 GTTGGTTTTTGCACATGGCC 59.056 50.000 0.00 0.00 43.89 5.36
4464 6628 0.835941 TTGGTTTTTGCACATGGCCT 59.164 45.000 3.32 0.00 43.89 5.19
4465 6629 1.709578 TGGTTTTTGCACATGGCCTA 58.290 45.000 3.32 0.00 43.89 3.93
4466 6630 2.255406 TGGTTTTTGCACATGGCCTAT 58.745 42.857 3.32 0.00 43.89 2.57
4467 6631 2.028294 TGGTTTTTGCACATGGCCTATG 60.028 45.455 3.32 8.98 43.89 2.23
4522 6686 2.029020 TCTCGGATAGTATGCACATGCC 60.029 50.000 0.49 0.00 41.18 4.40
4532 6696 0.178995 TGCACATGCCCAGAACAGAA 60.179 50.000 0.49 0.00 41.18 3.02
4535 6699 1.538512 CACATGCCCAGAACAGAACTG 59.461 52.381 0.00 0.00 35.43 3.16
4541 6705 0.671781 CCAGAACAGAACTGGCTCCG 60.672 60.000 6.76 0.00 46.30 4.63
4546 6710 1.276622 ACAGAACTGGCTCCGGTATT 58.723 50.000 0.00 0.00 34.70 1.89
4549 6713 3.081804 CAGAACTGGCTCCGGTATTTTT 58.918 45.455 0.00 0.00 34.70 1.94
4550 6714 3.081804 AGAACTGGCTCCGGTATTTTTG 58.918 45.455 0.00 0.00 34.70 2.44
4551 6715 2.579410 ACTGGCTCCGGTATTTTTGT 57.421 45.000 0.00 0.00 33.13 2.83
4552 6716 2.871453 ACTGGCTCCGGTATTTTTGTT 58.129 42.857 0.00 0.00 33.13 2.83
4553 6717 2.556622 ACTGGCTCCGGTATTTTTGTTG 59.443 45.455 0.00 0.00 33.13 3.33
4559 6723 4.806775 GCTCCGGTATTTTTGTTGTTGTTT 59.193 37.500 0.00 0.00 0.00 2.83
4611 6775 7.288810 TCAAACAAGAAACAAATCATAGCCT 57.711 32.000 0.00 0.00 0.00 4.58
4612 6776 7.147312 TCAAACAAGAAACAAATCATAGCCTG 58.853 34.615 0.00 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 7.977853 ACGTACATATGAAGTCCTCGTATTTTT 59.022 33.333 10.38 0.00 34.53 1.94
37 38 7.434307 CACGTACATATGAAGTCCTCGTATTTT 59.566 37.037 10.38 0.00 34.53 1.82
38 39 6.916387 CACGTACATATGAAGTCCTCGTATTT 59.084 38.462 10.38 0.00 34.53 1.40
39 40 6.436261 CACGTACATATGAAGTCCTCGTATT 58.564 40.000 10.38 0.00 34.53 1.89
40 41 5.048921 CCACGTACATATGAAGTCCTCGTAT 60.049 44.000 10.38 0.00 36.80 3.06
41 42 4.274214 CCACGTACATATGAAGTCCTCGTA 59.726 45.833 10.38 0.00 0.00 3.43
42 43 3.066342 CCACGTACATATGAAGTCCTCGT 59.934 47.826 10.38 6.28 0.00 4.18
43 44 3.629058 CCACGTACATATGAAGTCCTCG 58.371 50.000 10.38 5.72 0.00 4.63
44 45 3.068307 AGCCACGTACATATGAAGTCCTC 59.932 47.826 10.38 0.00 0.00 3.71
45 46 3.031736 AGCCACGTACATATGAAGTCCT 58.968 45.455 10.38 2.65 0.00 3.85
46 47 3.454371 AGCCACGTACATATGAAGTCC 57.546 47.619 10.38 0.58 0.00 3.85
47 48 4.181578 ACAAGCCACGTACATATGAAGTC 58.818 43.478 10.38 0.00 0.00 3.01
48 49 4.202245 ACAAGCCACGTACATATGAAGT 57.798 40.909 10.38 3.28 0.00 3.01
49 50 4.629634 TGAACAAGCCACGTACATATGAAG 59.370 41.667 10.38 2.63 0.00 3.02
50 51 4.570930 TGAACAAGCCACGTACATATGAA 58.429 39.130 10.38 0.00 0.00 2.57
51 52 4.180817 CTGAACAAGCCACGTACATATGA 58.819 43.478 10.38 0.00 0.00 2.15
52 53 3.932710 ACTGAACAAGCCACGTACATATG 59.067 43.478 0.00 0.00 0.00 1.78
53 54 4.202245 ACTGAACAAGCCACGTACATAT 57.798 40.909 0.00 0.00 0.00 1.78
54 55 3.671008 ACTGAACAAGCCACGTACATA 57.329 42.857 0.00 0.00 0.00 2.29
55 56 2.543777 ACTGAACAAGCCACGTACAT 57.456 45.000 0.00 0.00 0.00 2.29
56 57 2.319136 AACTGAACAAGCCACGTACA 57.681 45.000 0.00 0.00 0.00 2.90
57 58 3.685836 AAAACTGAACAAGCCACGTAC 57.314 42.857 0.00 0.00 0.00 3.67
58 59 5.117584 TCTTAAAACTGAACAAGCCACGTA 58.882 37.500 0.00 0.00 0.00 3.57
59 60 3.942748 TCTTAAAACTGAACAAGCCACGT 59.057 39.130 0.00 0.00 0.00 4.49
60 61 4.545823 TCTTAAAACTGAACAAGCCACG 57.454 40.909 0.00 0.00 0.00 4.94
61 62 4.733405 CGTTCTTAAAACTGAACAAGCCAC 59.267 41.667 0.00 0.00 41.67 5.01
62 63 4.636648 TCGTTCTTAAAACTGAACAAGCCA 59.363 37.500 0.00 0.00 41.67 4.75
63 64 4.968181 GTCGTTCTTAAAACTGAACAAGCC 59.032 41.667 0.00 0.00 41.67 4.35
64 65 5.565695 TGTCGTTCTTAAAACTGAACAAGC 58.434 37.500 0.00 0.00 41.67 4.01
65 66 7.018826 TGTTGTCGTTCTTAAAACTGAACAAG 58.981 34.615 0.00 0.00 41.67 3.16
66 67 6.900189 TGTTGTCGTTCTTAAAACTGAACAA 58.100 32.000 0.00 7.16 41.67 2.83
67 68 6.483385 TGTTGTCGTTCTTAAAACTGAACA 57.517 33.333 0.00 0.00 41.67 3.18
68 69 7.019418 AGTTGTTGTCGTTCTTAAAACTGAAC 58.981 34.615 0.00 0.00 39.15 3.18
69 70 7.136289 AGTTGTTGTCGTTCTTAAAACTGAA 57.864 32.000 0.00 0.00 0.00 3.02
70 71 6.730960 AGTTGTTGTCGTTCTTAAAACTGA 57.269 33.333 0.00 0.00 0.00 3.41
71 72 6.627671 GCTAGTTGTTGTCGTTCTTAAAACTG 59.372 38.462 0.00 0.00 0.00 3.16
72 73 6.537660 AGCTAGTTGTTGTCGTTCTTAAAACT 59.462 34.615 0.00 0.00 0.00 2.66
73 74 6.712549 AGCTAGTTGTTGTCGTTCTTAAAAC 58.287 36.000 0.00 0.00 0.00 2.43
74 75 6.913873 AGCTAGTTGTTGTCGTTCTTAAAA 57.086 33.333 0.00 0.00 0.00 1.52
75 76 6.535865 TGAAGCTAGTTGTTGTCGTTCTTAAA 59.464 34.615 0.00 0.00 0.00 1.52
76 77 6.044046 TGAAGCTAGTTGTTGTCGTTCTTAA 58.956 36.000 0.00 0.00 0.00 1.85
77 78 5.593968 TGAAGCTAGTTGTTGTCGTTCTTA 58.406 37.500 0.00 0.00 0.00 2.10
78 79 4.439057 TGAAGCTAGTTGTTGTCGTTCTT 58.561 39.130 0.00 0.00 0.00 2.52
79 80 4.051922 CTGAAGCTAGTTGTTGTCGTTCT 58.948 43.478 0.00 0.00 0.00 3.01
80 81 4.049186 TCTGAAGCTAGTTGTTGTCGTTC 58.951 43.478 0.00 0.00 0.00 3.95
81 82 4.051922 CTCTGAAGCTAGTTGTTGTCGTT 58.948 43.478 0.00 0.00 0.00 3.85
82 83 3.068307 ACTCTGAAGCTAGTTGTTGTCGT 59.932 43.478 0.00 0.00 0.00 4.34
83 84 3.643763 ACTCTGAAGCTAGTTGTTGTCG 58.356 45.455 0.00 0.00 0.00 4.35
84 85 5.774630 ACTACTCTGAAGCTAGTTGTTGTC 58.225 41.667 0.00 0.00 29.26 3.18
85 86 5.793030 ACTACTCTGAAGCTAGTTGTTGT 57.207 39.130 0.00 0.00 29.26 3.32
86 87 6.915349 AGTACTACTCTGAAGCTAGTTGTTG 58.085 40.000 6.74 1.42 34.35 3.33
87 88 7.527568 AAGTACTACTCTGAAGCTAGTTGTT 57.472 36.000 6.74 0.00 34.35 2.83
88 89 7.527568 AAAGTACTACTCTGAAGCTAGTTGT 57.472 36.000 0.00 6.67 36.08 3.32
113 114 9.083080 GCCACTTGTTCGCTTTTAATAATTTAT 57.917 29.630 0.00 0.00 0.00 1.40
114 115 8.301002 AGCCACTTGTTCGCTTTTAATAATTTA 58.699 29.630 0.00 0.00 0.00 1.40
115 116 7.151976 AGCCACTTGTTCGCTTTTAATAATTT 58.848 30.769 0.00 0.00 0.00 1.82
116 117 6.687604 AGCCACTTGTTCGCTTTTAATAATT 58.312 32.000 0.00 0.00 0.00 1.40
117 118 6.267496 AGCCACTTGTTCGCTTTTAATAAT 57.733 33.333 0.00 0.00 0.00 1.28
118 119 5.699097 AGCCACTTGTTCGCTTTTAATAA 57.301 34.783 0.00 0.00 0.00 1.40
119 120 5.457140 CAAGCCACTTGTTCGCTTTTAATA 58.543 37.500 0.00 0.00 40.79 0.98
120 121 4.298332 CAAGCCACTTGTTCGCTTTTAAT 58.702 39.130 0.00 0.00 40.79 1.40
121 122 3.701241 CAAGCCACTTGTTCGCTTTTAA 58.299 40.909 0.00 0.00 40.79 1.52
122 123 2.542824 GCAAGCCACTTGTTCGCTTTTA 60.543 45.455 8.95 0.00 42.77 1.52
123 124 1.802508 GCAAGCCACTTGTTCGCTTTT 60.803 47.619 8.95 0.00 42.77 2.27
124 125 0.249031 GCAAGCCACTTGTTCGCTTT 60.249 50.000 8.95 0.00 42.77 3.51
125 126 1.360192 GCAAGCCACTTGTTCGCTT 59.640 52.632 8.95 0.00 42.77 4.68
126 127 2.896801 CGCAAGCCACTTGTTCGCT 61.897 57.895 8.95 0.00 42.77 4.93
127 128 2.427410 CGCAAGCCACTTGTTCGC 60.427 61.111 8.95 0.00 42.77 4.70
128 129 2.058829 AACCGCAAGCCACTTGTTCG 62.059 55.000 8.95 5.09 42.77 3.95
129 130 0.102300 AAACCGCAAGCCACTTGTTC 59.898 50.000 8.95 0.00 42.77 3.18
130 131 0.179113 CAAACCGCAAGCCACTTGTT 60.179 50.000 8.95 0.00 42.77 2.83
131 132 1.034838 TCAAACCGCAAGCCACTTGT 61.035 50.000 8.95 0.00 42.77 3.16
132 133 0.314935 ATCAAACCGCAAGCCACTTG 59.685 50.000 2.95 2.95 43.57 3.16
133 134 1.904287 TATCAAACCGCAAGCCACTT 58.096 45.000 0.00 0.00 0.00 3.16
134 135 1.812571 CTTATCAAACCGCAAGCCACT 59.187 47.619 0.00 0.00 0.00 4.00
135 136 1.539827 ACTTATCAAACCGCAAGCCAC 59.460 47.619 0.00 0.00 0.00 5.01
136 137 1.904287 ACTTATCAAACCGCAAGCCA 58.096 45.000 0.00 0.00 0.00 4.75
137 138 2.030274 ACAACTTATCAAACCGCAAGCC 60.030 45.455 0.00 0.00 0.00 4.35
138 139 3.282831 ACAACTTATCAAACCGCAAGC 57.717 42.857 0.00 0.00 0.00 4.01
139 140 5.106317 ACCATACAACTTATCAAACCGCAAG 60.106 40.000 0.00 0.00 0.00 4.01
140 141 4.762765 ACCATACAACTTATCAAACCGCAA 59.237 37.500 0.00 0.00 0.00 4.85
141 142 4.155099 CACCATACAACTTATCAAACCGCA 59.845 41.667 0.00 0.00 0.00 5.69
142 143 4.438200 CCACCATACAACTTATCAAACCGC 60.438 45.833 0.00 0.00 0.00 5.68
143 144 4.438200 GCCACCATACAACTTATCAAACCG 60.438 45.833 0.00 0.00 0.00 4.44
144 145 4.461081 TGCCACCATACAACTTATCAAACC 59.539 41.667 0.00 0.00 0.00 3.27
145 146 5.637006 TGCCACCATACAACTTATCAAAC 57.363 39.130 0.00 0.00 0.00 2.93
146 147 5.948758 TCATGCCACCATACAACTTATCAAA 59.051 36.000 0.00 0.00 0.00 2.69
147 148 5.504853 TCATGCCACCATACAACTTATCAA 58.495 37.500 0.00 0.00 0.00 2.57
148 149 5.109500 TCATGCCACCATACAACTTATCA 57.891 39.130 0.00 0.00 0.00 2.15
149 150 5.532406 ACATCATGCCACCATACAACTTATC 59.468 40.000 0.00 0.00 0.00 1.75
150 151 5.448654 ACATCATGCCACCATACAACTTAT 58.551 37.500 0.00 0.00 0.00 1.73
151 152 4.854173 ACATCATGCCACCATACAACTTA 58.146 39.130 0.00 0.00 0.00 2.24
152 153 3.700538 ACATCATGCCACCATACAACTT 58.299 40.909 0.00 0.00 0.00 2.66
153 154 3.370840 ACATCATGCCACCATACAACT 57.629 42.857 0.00 0.00 0.00 3.16
154 155 4.423732 GAAACATCATGCCACCATACAAC 58.576 43.478 0.00 0.00 0.00 3.32
155 156 3.446873 GGAAACATCATGCCACCATACAA 59.553 43.478 0.00 0.00 0.00 2.41
156 157 3.023119 GGAAACATCATGCCACCATACA 58.977 45.455 0.00 0.00 0.00 2.29
157 158 2.033299 CGGAAACATCATGCCACCATAC 59.967 50.000 0.00 0.00 0.00 2.39
158 159 2.296792 CGGAAACATCATGCCACCATA 58.703 47.619 0.00 0.00 0.00 2.74
159 160 1.105457 CGGAAACATCATGCCACCAT 58.895 50.000 0.00 0.00 0.00 3.55
160 161 0.251121 ACGGAAACATCATGCCACCA 60.251 50.000 0.00 0.00 0.00 4.17
161 162 1.670811 CTACGGAAACATCATGCCACC 59.329 52.381 0.00 0.00 0.00 4.61
162 163 2.627945 TCTACGGAAACATCATGCCAC 58.372 47.619 0.00 0.00 0.00 5.01
163 164 3.205338 CATCTACGGAAACATCATGCCA 58.795 45.455 0.00 0.00 0.00 4.92
164 165 2.549754 CCATCTACGGAAACATCATGCC 59.450 50.000 0.00 0.00 0.00 4.40
165 166 2.549754 CCCATCTACGGAAACATCATGC 59.450 50.000 0.00 0.00 0.00 4.06
166 167 4.071961 TCCCATCTACGGAAACATCATG 57.928 45.455 0.00 0.00 0.00 3.07
167 168 4.164221 AGTTCCCATCTACGGAAACATCAT 59.836 41.667 0.00 0.00 41.03 2.45
168 169 3.517901 AGTTCCCATCTACGGAAACATCA 59.482 43.478 0.00 0.00 41.03 3.07
169 170 4.138487 AGTTCCCATCTACGGAAACATC 57.862 45.455 0.00 0.00 41.03 3.06
170 171 4.569719 AAGTTCCCATCTACGGAAACAT 57.430 40.909 0.00 0.00 41.03 2.71
171 172 4.360951 AAAGTTCCCATCTACGGAAACA 57.639 40.909 0.00 0.00 41.03 2.83
172 173 5.936372 AGTAAAAGTTCCCATCTACGGAAAC 59.064 40.000 0.00 0.00 41.03 2.78
173 174 6.117975 AGTAAAAGTTCCCATCTACGGAAA 57.882 37.500 0.00 0.00 41.03 3.13
174 175 5.750352 AGTAAAAGTTCCCATCTACGGAA 57.250 39.130 0.00 0.00 37.04 4.30
175 176 5.337813 GGAAGTAAAAGTTCCCATCTACGGA 60.338 44.000 2.60 0.00 40.94 4.69
176 177 4.874396 GGAAGTAAAAGTTCCCATCTACGG 59.126 45.833 2.60 0.00 40.94 4.02
177 178 4.565564 CGGAAGTAAAAGTTCCCATCTACG 59.434 45.833 7.73 0.00 43.27 3.51
178 179 5.485620 ACGGAAGTAAAAGTTCCCATCTAC 58.514 41.667 7.73 0.00 43.27 2.59
179 180 5.750352 ACGGAAGTAAAAGTTCCCATCTA 57.250 39.130 7.73 0.00 43.27 1.98
180 181 4.635699 ACGGAAGTAAAAGTTCCCATCT 57.364 40.909 7.73 0.00 43.27 2.90
195 196 3.057245 TGTTCAGACTCATGAGACGGAAG 60.057 47.826 29.58 17.21 37.75 3.46
196 197 2.890945 TGTTCAGACTCATGAGACGGAA 59.109 45.455 29.27 27.88 35.80 4.30
197 198 2.514803 TGTTCAGACTCATGAGACGGA 58.485 47.619 29.27 24.15 0.00 4.69
198 199 3.057245 TCTTGTTCAGACTCATGAGACGG 60.057 47.826 29.27 22.30 0.00 4.79
199 200 4.166187 TCTTGTTCAGACTCATGAGACG 57.834 45.455 29.27 17.62 0.00 4.18
200 201 8.715191 ATATTTCTTGTTCAGACTCATGAGAC 57.285 34.615 29.27 22.46 0.00 3.36
202 203 9.258826 CCTATATTTCTTGTTCAGACTCATGAG 57.741 37.037 21.37 21.37 0.00 2.90
203 204 8.762645 ACCTATATTTCTTGTTCAGACTCATGA 58.237 33.333 0.00 0.00 0.00 3.07
204 205 8.954950 ACCTATATTTCTTGTTCAGACTCATG 57.045 34.615 0.00 0.00 0.00 3.07
205 206 9.965902 AAACCTATATTTCTTGTTCAGACTCAT 57.034 29.630 0.00 0.00 0.00 2.90
206 207 9.793259 AAAACCTATATTTCTTGTTCAGACTCA 57.207 29.630 0.00 0.00 0.00 3.41
208 209 9.574516 ACAAAACCTATATTTCTTGTTCAGACT 57.425 29.630 0.00 0.00 0.00 3.24
215 216 9.744468 GTGTCAAACAAAACCTATATTTCTTGT 57.256 29.630 0.00 0.00 0.00 3.16
216 217 9.191995 GGTGTCAAACAAAACCTATATTTCTTG 57.808 33.333 0.00 0.00 0.00 3.02
217 218 9.143155 AGGTGTCAAACAAAACCTATATTTCTT 57.857 29.630 0.00 0.00 41.28 2.52
218 219 8.706322 AGGTGTCAAACAAAACCTATATTTCT 57.294 30.769 0.00 0.00 41.28 2.52
219 220 9.406828 GAAGGTGTCAAACAAAACCTATATTTC 57.593 33.333 0.00 0.00 42.25 2.17
220 221 8.079809 CGAAGGTGTCAAACAAAACCTATATTT 58.920 33.333 0.00 0.00 42.25 1.40
221 222 7.590279 CGAAGGTGTCAAACAAAACCTATATT 58.410 34.615 0.00 0.00 42.25 1.28
222 223 6.349033 GCGAAGGTGTCAAACAAAACCTATAT 60.349 38.462 0.00 0.00 42.25 0.86
223 224 5.049267 GCGAAGGTGTCAAACAAAACCTATA 60.049 40.000 0.00 0.00 42.25 1.31
224 225 4.261447 GCGAAGGTGTCAAACAAAACCTAT 60.261 41.667 0.00 0.00 42.25 2.57
225 226 3.065648 GCGAAGGTGTCAAACAAAACCTA 59.934 43.478 0.00 0.00 42.25 3.08
226 227 2.159296 GCGAAGGTGTCAAACAAAACCT 60.159 45.455 0.00 0.00 45.01 3.50
227 228 2.190161 GCGAAGGTGTCAAACAAAACC 58.810 47.619 0.00 0.00 0.00 3.27
228 229 2.190161 GGCGAAGGTGTCAAACAAAAC 58.810 47.619 0.00 0.00 0.00 2.43
229 230 1.819288 TGGCGAAGGTGTCAAACAAAA 59.181 42.857 0.00 0.00 0.00 2.44
230 231 1.464734 TGGCGAAGGTGTCAAACAAA 58.535 45.000 0.00 0.00 0.00 2.83
231 232 1.464734 TTGGCGAAGGTGTCAAACAA 58.535 45.000 0.00 0.00 0.00 2.83
232 233 1.686355 ATTGGCGAAGGTGTCAAACA 58.314 45.000 0.00 0.00 0.00 2.83
233 234 2.793278 AATTGGCGAAGGTGTCAAAC 57.207 45.000 0.00 0.00 0.00 2.93
234 235 3.452474 CAAAATTGGCGAAGGTGTCAAA 58.548 40.909 0.00 0.00 0.00 2.69
235 236 2.801342 GCAAAATTGGCGAAGGTGTCAA 60.801 45.455 0.00 0.00 0.00 3.18
236 237 1.269517 GCAAAATTGGCGAAGGTGTCA 60.270 47.619 0.00 0.00 0.00 3.58
237 238 1.269517 TGCAAAATTGGCGAAGGTGTC 60.270 47.619 0.00 0.00 0.00 3.67
238 239 0.749649 TGCAAAATTGGCGAAGGTGT 59.250 45.000 0.00 0.00 0.00 4.16
239 240 1.139163 GTGCAAAATTGGCGAAGGTG 58.861 50.000 0.00 0.00 0.00 4.00
240 241 1.039856 AGTGCAAAATTGGCGAAGGT 58.960 45.000 0.00 0.00 0.00 3.50
241 242 2.153366 AAGTGCAAAATTGGCGAAGG 57.847 45.000 0.00 0.00 0.00 3.46
242 243 5.844301 ATAAAAGTGCAAAATTGGCGAAG 57.156 34.783 0.00 0.00 0.00 3.79
243 244 7.715265 TTAATAAAAGTGCAAAATTGGCGAA 57.285 28.000 0.00 0.00 0.00 4.70
244 245 7.715265 TTTAATAAAAGTGCAAAATTGGCGA 57.285 28.000 0.00 0.00 0.00 5.54
245 246 8.420807 CTTTTAATAAAAGTGCAAAATTGGCG 57.579 30.769 15.34 0.00 42.23 5.69
263 264 9.539194 AGGAGAAATGGAGAATGAACTTTTAAT 57.461 29.630 0.00 0.00 0.00 1.40
264 265 8.940397 AGGAGAAATGGAGAATGAACTTTTAA 57.060 30.769 0.00 0.00 0.00 1.52
265 266 9.672673 CTAGGAGAAATGGAGAATGAACTTTTA 57.327 33.333 0.00 0.00 0.00 1.52
266 267 8.166726 ACTAGGAGAAATGGAGAATGAACTTTT 58.833 33.333 0.00 0.00 0.00 2.27
267 268 7.694093 ACTAGGAGAAATGGAGAATGAACTTT 58.306 34.615 0.00 0.00 0.00 2.66
268 269 7.264294 ACTAGGAGAAATGGAGAATGAACTT 57.736 36.000 0.00 0.00 0.00 2.66
269 270 6.882768 ACTAGGAGAAATGGAGAATGAACT 57.117 37.500 0.00 0.00 0.00 3.01
274 275 9.785982 GCTTTAATACTAGGAGAAATGGAGAAT 57.214 33.333 0.00 0.00 0.00 2.40
275 276 8.993424 AGCTTTAATACTAGGAGAAATGGAGAA 58.007 33.333 0.00 0.00 0.00 2.87
276 277 8.554490 AGCTTTAATACTAGGAGAAATGGAGA 57.446 34.615 0.00 0.00 0.00 3.71
279 280 8.994170 GCTTAGCTTTAATACTAGGAGAAATGG 58.006 37.037 0.00 0.00 0.00 3.16
280 281 8.994170 GGCTTAGCTTTAATACTAGGAGAAATG 58.006 37.037 3.59 0.00 0.00 2.32
281 282 8.939932 AGGCTTAGCTTTAATACTAGGAGAAAT 58.060 33.333 3.59 0.00 0.00 2.17
282 283 8.320338 AGGCTTAGCTTTAATACTAGGAGAAA 57.680 34.615 3.59 0.00 0.00 2.52
283 284 7.916077 AGGCTTAGCTTTAATACTAGGAGAA 57.084 36.000 3.59 0.00 0.00 2.87
284 285 7.916077 AAGGCTTAGCTTTAATACTAGGAGA 57.084 36.000 3.59 0.00 0.00 3.71
285 286 7.442666 CCAAAGGCTTAGCTTTAATACTAGGAG 59.557 40.741 1.15 0.00 0.00 3.69
286 287 7.126726 TCCAAAGGCTTAGCTTTAATACTAGGA 59.873 37.037 1.15 0.00 0.00 2.94
287 288 7.280356 TCCAAAGGCTTAGCTTTAATACTAGG 58.720 38.462 1.15 0.00 0.00 3.02
288 289 8.910351 ATCCAAAGGCTTAGCTTTAATACTAG 57.090 34.615 1.15 0.00 0.00 2.57
290 291 9.343539 CTAATCCAAAGGCTTAGCTTTAATACT 57.656 33.333 1.15 0.00 27.13 2.12
316 317 6.856895 AGTAAAGATTAGCCATTCAACAAGC 58.143 36.000 0.00 0.00 0.00 4.01
345 346 7.972277 GTCAAGTATGAGATGTTTTACGGTAGA 59.028 37.037 0.00 0.00 35.88 2.59
376 377 0.666374 CGTTCCACAGGAAACCAACC 59.334 55.000 0.00 0.00 43.86 3.77
377 378 1.385528 ACGTTCCACAGGAAACCAAC 58.614 50.000 0.00 0.00 43.86 3.77
380 381 3.681417 GTGTATACGTTCCACAGGAAACC 59.319 47.826 0.00 0.00 43.86 3.27
381 382 4.309099 TGTGTATACGTTCCACAGGAAAC 58.691 43.478 9.65 0.00 43.86 2.78
382 383 4.603989 TGTGTATACGTTCCACAGGAAA 57.396 40.909 9.65 0.00 43.86 3.13
383 384 4.603989 TTGTGTATACGTTCCACAGGAA 57.396 40.909 12.39 0.00 39.96 3.36
384 385 4.811969 ATTGTGTATACGTTCCACAGGA 57.188 40.909 12.39 3.04 39.96 3.86
385 386 6.277605 TGATATTGTGTATACGTTCCACAGG 58.722 40.000 12.39 0.00 39.96 4.00
386 387 7.491372 AGTTGATATTGTGTATACGTTCCACAG 59.509 37.037 12.39 0.00 39.96 3.66
387 388 7.276878 CAGTTGATATTGTGTATACGTTCCACA 59.723 37.037 9.65 9.65 37.32 4.17
388 389 7.618442 CAGTTGATATTGTGTATACGTTCCAC 58.382 38.462 0.00 0.00 0.00 4.02
394 395 7.222805 AGTCAAGCAGTTGATATTGTGTATACG 59.777 37.037 0.00 0.00 44.58 3.06
428 431 7.169308 GGCATCATTTTCTTGCAAGAATGATAG 59.831 37.037 35.53 30.59 43.92 2.08
439 442 1.202114 TCCGTGGCATCATTTTCTTGC 59.798 47.619 0.00 0.00 35.64 4.01
444 447 2.214376 TCCTTCCGTGGCATCATTTT 57.786 45.000 0.00 0.00 0.00 1.82
453 465 0.321653 CTCAACCCTTCCTTCCGTGG 60.322 60.000 0.00 0.00 0.00 4.94
454 466 0.955919 GCTCAACCCTTCCTTCCGTG 60.956 60.000 0.00 0.00 0.00 4.94
456 468 0.674895 CTGCTCAACCCTTCCTTCCG 60.675 60.000 0.00 0.00 0.00 4.30
459 471 0.037447 GCTCTGCTCAACCCTTCCTT 59.963 55.000 0.00 0.00 0.00 3.36
460 472 1.130054 TGCTCTGCTCAACCCTTCCT 61.130 55.000 0.00 0.00 0.00 3.36
491 503 7.465245 GCTTGTAGAAAATCTCCATTTCGAGAG 60.465 40.741 0.00 0.00 42.06 3.20
495 507 6.182039 TGCTTGTAGAAAATCTCCATTTCG 57.818 37.500 0.00 0.00 40.78 3.46
542 554 9.586435 TCGAAATGCATCAAATACTCGATATAT 57.414 29.630 0.00 0.00 0.00 0.86
548 560 5.233050 AGTCTCGAAATGCATCAAATACTCG 59.767 40.000 0.00 0.74 0.00 4.18
554 566 5.687770 TTCAAGTCTCGAAATGCATCAAA 57.312 34.783 0.00 0.00 0.00 2.69
565 577 9.084164 GCTTACAACTAAATATTCAAGTCTCGA 57.916 33.333 4.40 0.00 0.00 4.04
566 578 8.050750 CGCTTACAACTAAATATTCAAGTCTCG 58.949 37.037 4.40 1.01 0.00 4.04
574 586 7.437267 TGACTAGGCGCTTACAACTAAATATTC 59.563 37.037 7.64 0.00 0.00 1.75
577 589 6.127535 ACTGACTAGGCGCTTACAACTAAATA 60.128 38.462 7.64 0.00 0.00 1.40
586 598 2.260481 GTTGACTGACTAGGCGCTTAC 58.740 52.381 7.64 0.00 33.27 2.34
588 600 0.679505 TGTTGACTGACTAGGCGCTT 59.320 50.000 7.64 0.52 33.27 4.68
589 601 0.898320 ATGTTGACTGACTAGGCGCT 59.102 50.000 7.64 0.00 33.27 5.92
590 602 1.002366 CATGTTGACTGACTAGGCGC 58.998 55.000 0.00 0.00 33.27 6.53
592 604 3.195825 ACCTACATGTTGACTGACTAGGC 59.804 47.826 2.30 0.00 0.00 3.93
593 605 4.462834 TCACCTACATGTTGACTGACTAGG 59.537 45.833 2.30 3.59 0.00 3.02
594 606 5.048013 TGTCACCTACATGTTGACTGACTAG 60.048 44.000 23.06 5.36 31.43 2.57
595 607 4.830600 TGTCACCTACATGTTGACTGACTA 59.169 41.667 23.06 13.69 31.43 2.59
597 609 3.990092 TGTCACCTACATGTTGACTGAC 58.010 45.455 23.06 21.79 31.43 3.51
608 620 6.425721 GTGCTTACAACTAAATGTCACCTACA 59.574 38.462 0.00 0.00 43.86 2.74
609 621 6.128363 GGTGCTTACAACTAAATGTCACCTAC 60.128 42.308 8.64 0.00 40.18 3.18
610 622 5.935789 GGTGCTTACAACTAAATGTCACCTA 59.064 40.000 8.64 0.00 40.18 3.08
611 623 4.760204 GGTGCTTACAACTAAATGTCACCT 59.240 41.667 8.64 0.00 40.18 4.00
612 624 4.760204 AGGTGCTTACAACTAAATGTCACC 59.240 41.667 8.09 8.09 43.97 4.02
613 625 5.941948 AGGTGCTTACAACTAAATGTCAC 57.058 39.130 0.00 0.00 43.97 3.67
614 626 6.765403 ACTAGGTGCTTACAACTAAATGTCA 58.235 36.000 0.00 0.00 45.42 3.58
615 627 6.872020 TGACTAGGTGCTTACAACTAAATGTC 59.128 38.462 0.00 0.00 45.42 3.06
637 2382 3.244078 TGGTCACCTACATGTTGACTGAC 60.244 47.826 22.23 21.01 0.00 3.51
639 2384 3.006859 TCTGGTCACCTACATGTTGACTG 59.993 47.826 22.23 16.83 0.00 3.51
640 2385 3.006967 GTCTGGTCACCTACATGTTGACT 59.993 47.826 22.23 1.44 0.00 3.41
641 2386 3.006967 AGTCTGGTCACCTACATGTTGAC 59.993 47.826 17.27 17.27 0.00 3.18
643 2388 3.685139 AGTCTGGTCACCTACATGTTG 57.315 47.619 2.30 0.84 0.00 3.33
644 2389 6.096987 CAGTATAGTCTGGTCACCTACATGTT 59.903 42.308 2.30 0.00 0.00 2.71
678 2423 9.683069 GTATGATGGATTTTCATAAACACCATC 57.317 33.333 19.87 19.87 46.61 3.51
679 2424 9.425248 AGTATGATGGATTTTCATAAACACCAT 57.575 29.630 0.00 0.00 41.83 3.55
689 2434 7.013559 CCAGCATGTAAGTATGATGGATTTTCA 59.986 37.037 15.77 0.00 0.00 2.69
703 2448 3.769739 TTCTCACACCAGCATGTAAGT 57.230 42.857 0.00 0.00 0.00 2.24
705 2450 2.805671 CGTTTCTCACACCAGCATGTAA 59.194 45.455 0.00 0.00 0.00 2.41
707 2452 1.229428 CGTTTCTCACACCAGCATGT 58.771 50.000 0.00 0.00 0.00 3.21
709 2454 0.396435 TCCGTTTCTCACACCAGCAT 59.604 50.000 0.00 0.00 0.00 3.79
710 2455 0.249868 CTCCGTTTCTCACACCAGCA 60.250 55.000 0.00 0.00 0.00 4.41
711 2456 0.033504 TCTCCGTTTCTCACACCAGC 59.966 55.000 0.00 0.00 0.00 4.85
712 2457 1.937108 GCTCTCCGTTTCTCACACCAG 60.937 57.143 0.00 0.00 0.00 4.00
713 2458 0.033504 GCTCTCCGTTTCTCACACCA 59.966 55.000 0.00 0.00 0.00 4.17
714 2459 0.033504 TGCTCTCCGTTTCTCACACC 59.966 55.000 0.00 0.00 0.00 4.16
734 2479 1.676967 GCCCCTCAACAGAAGCCTG 60.677 63.158 0.00 0.00 45.76 4.85
736 2481 1.228552 TTGCCCCTCAACAGAAGCC 60.229 57.895 0.00 0.00 0.00 4.35
743 2490 0.968405 TTTGCATCTTGCCCCTCAAC 59.032 50.000 0.00 0.00 44.23 3.18
748 2495 2.233431 TGTAACATTTGCATCTTGCCCC 59.767 45.455 0.00 0.00 44.23 5.80
778 2525 1.151668 ATTCACTCAGCTGTTCACGC 58.848 50.000 14.67 0.00 0.00 5.34
779 2526 3.364366 GGAAATTCACTCAGCTGTTCACG 60.364 47.826 14.67 1.18 0.00 4.35
838 2597 2.096713 GCTCGCATTCATTCGGTGATAC 60.097 50.000 0.00 0.00 36.54 2.24
844 2603 0.027194 CAGTGCTCGCATTCATTCGG 59.973 55.000 0.00 0.00 0.00 4.30
846 2605 1.733912 TGTCAGTGCTCGCATTCATTC 59.266 47.619 0.00 0.00 0.00 2.67
851 2610 1.296755 CTGCTGTCAGTGCTCGCATT 61.297 55.000 0.93 0.00 35.61 3.56
855 2614 2.356673 TGCTGCTGTCAGTGCTCG 60.357 61.111 16.76 0.00 42.29 5.03
925 2684 1.607148 GGGTCTTGGAGTTTGGAAACG 59.393 52.381 0.00 0.00 43.51 3.60
948 2707 1.208535 ACACACACAAGAGGACGGAAA 59.791 47.619 0.00 0.00 0.00 3.13
950 2709 0.387929 GACACACACAAGAGGACGGA 59.612 55.000 0.00 0.00 0.00 4.69
951 2710 0.939577 CGACACACACAAGAGGACGG 60.940 60.000 0.00 0.00 0.00 4.79
952 2711 1.548973 GCGACACACACAAGAGGACG 61.549 60.000 0.00 0.00 0.00 4.79
953 2712 0.529773 TGCGACACACACAAGAGGAC 60.530 55.000 0.00 0.00 0.00 3.85
1144 2903 0.465278 GAAGAGGAGGGATTGCTGGC 60.465 60.000 0.00 0.00 0.00 4.85
1189 2954 2.691779 GGGACGAGGAGGAGGAGGA 61.692 68.421 0.00 0.00 0.00 3.71
1446 3220 2.283529 GGGCTTGGTCGAGTCCAGA 61.284 63.158 4.07 0.00 41.18 3.86
1692 3466 5.105106 TGCCTTGTAATCGTTGAGAATCCTA 60.105 40.000 0.00 0.00 0.00 2.94
1828 3623 5.106712 TGCGATGTGACAAGAAGGTTTTATC 60.107 40.000 0.00 0.00 0.00 1.75
1830 3625 4.130857 TGCGATGTGACAAGAAGGTTTTA 58.869 39.130 0.00 0.00 0.00 1.52
1835 3630 2.084610 TCTGCGATGTGACAAGAAGG 57.915 50.000 0.00 0.00 0.00 3.46
1907 3798 3.248602 CAGCCACTGAAACTGTCAAGTAC 59.751 47.826 0.00 0.00 35.22 2.73
1909 3800 2.292267 CAGCCACTGAAACTGTCAAGT 58.708 47.619 0.00 0.00 35.22 3.16
1941 3832 1.815003 CCGTTAGTTCCCAGTACGACT 59.185 52.381 0.00 0.00 0.00 4.18
1968 3859 7.770897 ACATATGTAACCTCCAAAATCTCAGTC 59.229 37.037 6.56 0.00 0.00 3.51
2429 4405 3.891366 ACTCACCTTGGGAATGTTTGAAG 59.109 43.478 0.00 0.00 0.00 3.02
2640 4620 4.584325 GCCATTATGCCAGACAAATAGGAA 59.416 41.667 0.00 0.00 0.00 3.36
2641 4621 4.144297 GCCATTATGCCAGACAAATAGGA 58.856 43.478 0.00 0.00 0.00 2.94
2675 4655 6.036083 CACCGAACTGGATGTTAGTTATTCAG 59.964 42.308 0.00 0.00 42.00 3.02
2708 4688 7.981102 AATACTTCTACTGAACTCAAAACCC 57.019 36.000 0.00 0.00 0.00 4.11
2743 4723 8.696410 TTTGTTCTTTACTCAATTTTCGCTTT 57.304 26.923 0.00 0.00 0.00 3.51
2787 4767 2.290367 TGCGCACCAATTATCTATGCAC 59.710 45.455 5.66 0.00 36.02 4.57
3126 5138 5.585500 TTTTAGAAACATCGGTGTCTTCG 57.415 39.130 0.00 0.00 38.49 3.79
3274 5286 7.527868 CGATAGGAATATCTTTGAACCCTCCAT 60.528 40.741 0.00 0.00 0.00 3.41
3784 5882 1.202806 GGCTGTGAGCATTAGGGCATA 60.203 52.381 0.00 0.00 44.75 3.14
3840 5938 6.808008 TCTGGAAGAATTAAGCAAGAACAG 57.192 37.500 0.00 0.00 42.31 3.16
3974 6072 3.316308 AGTCATCATCATCGTCATCGTCA 59.684 43.478 0.00 0.00 38.33 4.35
3986 6084 5.072741 TCATCCTCATCGTAGTCATCATCA 58.927 41.667 0.00 0.00 0.00 3.07
3989 6087 3.823304 CCTCATCCTCATCGTAGTCATCA 59.177 47.826 0.00 0.00 0.00 3.07
3990 6088 4.075682 TCCTCATCCTCATCGTAGTCATC 58.924 47.826 0.00 0.00 0.00 2.92
4004 6102 5.999205 AGTCATAGTCATCATCCTCATCC 57.001 43.478 0.00 0.00 0.00 3.51
4050 6151 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
4051 6152 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
4052 6153 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
4053 6154 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
4054 6155 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
4055 6156 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
4056 6157 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
4057 6158 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
4058 6159 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
4059 6160 8.605746 TCAAAAACGTTCTTATATTATGGGACG 58.394 33.333 0.00 9.33 0.00 4.79
4060 6161 9.712359 GTCAAAAACGTTCTTATATTATGGGAC 57.288 33.333 0.00 0.00 0.00 4.46
4061 6162 9.451002 TGTCAAAAACGTTCTTATATTATGGGA 57.549 29.630 0.00 0.00 0.00 4.37
4062 6163 9.498307 GTGTCAAAAACGTTCTTATATTATGGG 57.502 33.333 0.00 0.00 0.00 4.00
4070 6171 8.073768 CCACATTAGTGTCAAAAACGTTCTTAT 58.926 33.333 0.00 0.00 44.39 1.73
4071 6172 7.066043 ACCACATTAGTGTCAAAAACGTTCTTA 59.934 33.333 0.00 0.00 44.39 2.10
4072 6173 6.127842 ACCACATTAGTGTCAAAAACGTTCTT 60.128 34.615 0.00 0.00 44.39 2.52
4073 6174 5.355910 ACCACATTAGTGTCAAAAACGTTCT 59.644 36.000 0.00 0.00 44.39 3.01
4074 6175 5.454232 CACCACATTAGTGTCAAAAACGTTC 59.546 40.000 0.00 0.00 44.39 3.95
4075 6176 5.106078 ACACCACATTAGTGTCAAAAACGTT 60.106 36.000 0.00 0.00 45.13 3.99
4076 6177 4.396790 ACACCACATTAGTGTCAAAAACGT 59.603 37.500 0.00 0.00 45.13 3.99
4077 6178 4.915704 ACACCACATTAGTGTCAAAAACG 58.084 39.130 0.00 0.00 45.13 3.60
4079 6180 9.706691 TTTTTAACACCACATTAGTGTCAAAAA 57.293 25.926 11.78 11.78 45.97 1.94
4086 6187 7.190871 AGAACGTTTTTAACACCACATTAGTG 58.809 34.615 0.46 0.00 45.47 2.74
4087 6188 7.324354 AGAACGTTTTTAACACCACATTAGT 57.676 32.000 0.46 0.00 0.00 2.24
4088 6189 9.887406 ATAAGAACGTTTTTAACACCACATTAG 57.113 29.630 14.41 0.00 0.00 1.73
4101 6202 8.852135 TCTGTCCCAAAATATAAGAACGTTTTT 58.148 29.630 9.22 9.22 0.00 1.94
4102 6203 8.398878 TCTGTCCCAAAATATAAGAACGTTTT 57.601 30.769 0.46 0.00 0.00 2.43
4103 6204 7.120726 CCTCTGTCCCAAAATATAAGAACGTTT 59.879 37.037 0.46 0.00 0.00 3.60
4104 6205 6.598064 CCTCTGTCCCAAAATATAAGAACGTT 59.402 38.462 0.00 0.00 0.00 3.99
4105 6206 6.113411 CCTCTGTCCCAAAATATAAGAACGT 58.887 40.000 0.00 0.00 0.00 3.99
4106 6207 5.527582 CCCTCTGTCCCAAAATATAAGAACG 59.472 44.000 0.00 0.00 0.00 3.95
4107 6208 6.659824 TCCCTCTGTCCCAAAATATAAGAAC 58.340 40.000 0.00 0.00 0.00 3.01
4108 6209 6.447084 ACTCCCTCTGTCCCAAAATATAAGAA 59.553 38.462 0.00 0.00 0.00 2.52
4109 6210 5.970640 ACTCCCTCTGTCCCAAAATATAAGA 59.029 40.000 0.00 0.00 0.00 2.10
4110 6211 6.253946 ACTCCCTCTGTCCCAAAATATAAG 57.746 41.667 0.00 0.00 0.00 1.73
4111 6212 7.691791 GCATACTCCCTCTGTCCCAAAATATAA 60.692 40.741 0.00 0.00 0.00 0.98
4112 6213 6.239887 GCATACTCCCTCTGTCCCAAAATATA 60.240 42.308 0.00 0.00 0.00 0.86
4113 6214 5.456763 GCATACTCCCTCTGTCCCAAAATAT 60.457 44.000 0.00 0.00 0.00 1.28
4114 6215 4.141482 GCATACTCCCTCTGTCCCAAAATA 60.141 45.833 0.00 0.00 0.00 1.40
4115 6216 3.372025 GCATACTCCCTCTGTCCCAAAAT 60.372 47.826 0.00 0.00 0.00 1.82
4116 6217 2.026262 GCATACTCCCTCTGTCCCAAAA 60.026 50.000 0.00 0.00 0.00 2.44
4117 6218 1.559682 GCATACTCCCTCTGTCCCAAA 59.440 52.381 0.00 0.00 0.00 3.28
4118 6219 1.204146 GCATACTCCCTCTGTCCCAA 58.796 55.000 0.00 0.00 0.00 4.12
4119 6220 0.339859 AGCATACTCCCTCTGTCCCA 59.660 55.000 0.00 0.00 0.00 4.37
4120 6221 2.158445 TCTAGCATACTCCCTCTGTCCC 60.158 54.545 0.00 0.00 0.00 4.46
4121 6222 3.153919 CTCTAGCATACTCCCTCTGTCC 58.846 54.545 0.00 0.00 0.00 4.02
4122 6223 4.093472 TCTCTAGCATACTCCCTCTGTC 57.907 50.000 0.00 0.00 0.00 3.51
4123 6224 4.469657 CTTCTCTAGCATACTCCCTCTGT 58.530 47.826 0.00 0.00 0.00 3.41
4124 6225 3.826157 CCTTCTCTAGCATACTCCCTCTG 59.174 52.174 0.00 0.00 0.00 3.35
4125 6226 3.753846 GCCTTCTCTAGCATACTCCCTCT 60.754 52.174 0.00 0.00 0.00 3.69
4126 6227 2.560981 GCCTTCTCTAGCATACTCCCTC 59.439 54.545 0.00 0.00 0.00 4.30
4127 6228 2.604139 GCCTTCTCTAGCATACTCCCT 58.396 52.381 0.00 0.00 0.00 4.20
4128 6229 1.621317 GGCCTTCTCTAGCATACTCCC 59.379 57.143 0.00 0.00 0.00 4.30
4129 6230 2.320781 TGGCCTTCTCTAGCATACTCC 58.679 52.381 3.32 0.00 0.00 3.85
4130 6231 3.133003 TGTTGGCCTTCTCTAGCATACTC 59.867 47.826 3.32 0.00 0.00 2.59
4131 6232 3.107601 TGTTGGCCTTCTCTAGCATACT 58.892 45.455 3.32 0.00 0.00 2.12
4132 6233 3.118592 AGTGTTGGCCTTCTCTAGCATAC 60.119 47.826 3.32 0.00 0.00 2.39
4229 6330 0.533755 CCATGACGAGGAAGATGCCC 60.534 60.000 0.00 0.00 0.00 5.36
4262 6426 8.035984 GGACTAGTTGTAGCTGTAGAAATTTCT 58.964 37.037 23.53 23.53 41.24 2.52
4275 6439 5.642686 CAGAAGTACTGGACTAGTTGTAGC 58.357 45.833 0.00 0.00 42.39 3.58
4319 6483 5.978322 CGGTAGGAGATTCTGCTTAACTAAC 59.022 44.000 13.25 4.21 33.39 2.34
4343 6507 4.907582 ACTAAACGCAAACGCAAATAGAAC 59.092 37.500 0.00 0.00 45.53 3.01
4398 6562 0.521291 TTGCCTAAGTTCATGTGCGC 59.479 50.000 0.00 0.00 0.00 6.09
4399 6563 1.131126 CCTTGCCTAAGTTCATGTGCG 59.869 52.381 0.00 0.00 31.80 5.34
4400 6564 1.135286 GCCTTGCCTAAGTTCATGTGC 60.135 52.381 0.00 0.00 31.80 4.57
4401 6565 2.161855 TGCCTTGCCTAAGTTCATGTG 58.838 47.619 0.00 0.00 31.80 3.21
4402 6566 2.584835 TGCCTTGCCTAAGTTCATGT 57.415 45.000 0.00 0.00 31.80 3.21
4403 6567 2.165030 CCTTGCCTTGCCTAAGTTCATG 59.835 50.000 0.00 0.00 31.80 3.07
4404 6568 2.450476 CCTTGCCTTGCCTAAGTTCAT 58.550 47.619 0.00 0.00 31.80 2.57
4405 6569 1.909700 CCTTGCCTTGCCTAAGTTCA 58.090 50.000 0.00 0.00 31.80 3.18
4406 6570 0.528017 GCCTTGCCTTGCCTAAGTTC 59.472 55.000 0.00 0.00 31.80 3.01
4407 6571 0.178964 TGCCTTGCCTTGCCTAAGTT 60.179 50.000 0.00 0.00 31.80 2.66
4408 6572 0.178964 TTGCCTTGCCTTGCCTAAGT 60.179 50.000 0.00 0.00 31.80 2.24
4409 6573 0.968405 TTTGCCTTGCCTTGCCTAAG 59.032 50.000 0.00 0.00 0.00 2.18
4410 6574 1.643310 ATTTGCCTTGCCTTGCCTAA 58.357 45.000 0.00 0.00 0.00 2.69
4411 6575 1.643310 AATTTGCCTTGCCTTGCCTA 58.357 45.000 0.00 0.00 0.00 3.93
4412 6576 1.551883 CTAATTTGCCTTGCCTTGCCT 59.448 47.619 0.00 0.00 0.00 4.75
4413 6577 1.276138 ACTAATTTGCCTTGCCTTGCC 59.724 47.619 0.00 0.00 0.00 4.52
4414 6578 2.749280 ACTAATTTGCCTTGCCTTGC 57.251 45.000 0.00 0.00 0.00 4.01
4415 6579 5.126061 ACTCATACTAATTTGCCTTGCCTTG 59.874 40.000 0.00 0.00 0.00 3.61
4416 6580 5.126061 CACTCATACTAATTTGCCTTGCCTT 59.874 40.000 0.00 0.00 0.00 4.35
4417 6581 4.641989 CACTCATACTAATTTGCCTTGCCT 59.358 41.667 0.00 0.00 0.00 4.75
4418 6582 4.640201 TCACTCATACTAATTTGCCTTGCC 59.360 41.667 0.00 0.00 0.00 4.52
4419 6583 5.818136 TCACTCATACTAATTTGCCTTGC 57.182 39.130 0.00 0.00 0.00 4.01
4420 6584 6.128282 ACGTTCACTCATACTAATTTGCCTTG 60.128 38.462 0.00 0.00 0.00 3.61
4421 6585 5.938125 ACGTTCACTCATACTAATTTGCCTT 59.062 36.000 0.00 0.00 0.00 4.35
4422 6586 5.488341 ACGTTCACTCATACTAATTTGCCT 58.512 37.500 0.00 0.00 0.00 4.75
4423 6587 5.796350 ACGTTCACTCATACTAATTTGCC 57.204 39.130 0.00 0.00 0.00 4.52
4424 6588 6.021596 CCAACGTTCACTCATACTAATTTGC 58.978 40.000 0.00 0.00 0.00 3.68
4425 6589 7.129109 ACCAACGTTCACTCATACTAATTTG 57.871 36.000 0.00 0.00 0.00 2.32
4426 6590 7.739498 AACCAACGTTCACTCATACTAATTT 57.261 32.000 0.00 0.00 0.00 1.82
4427 6591 7.739498 AAACCAACGTTCACTCATACTAATT 57.261 32.000 0.00 0.00 0.00 1.40
4428 6592 7.739498 AAAACCAACGTTCACTCATACTAAT 57.261 32.000 0.00 0.00 0.00 1.73
4429 6593 7.411274 CAAAAACCAACGTTCACTCATACTAA 58.589 34.615 0.00 0.00 0.00 2.24
4430 6594 6.512091 GCAAAAACCAACGTTCACTCATACTA 60.512 38.462 0.00 0.00 0.00 1.82
4431 6595 5.732247 GCAAAAACCAACGTTCACTCATACT 60.732 40.000 0.00 0.00 0.00 2.12
4432 6596 4.439776 GCAAAAACCAACGTTCACTCATAC 59.560 41.667 0.00 0.00 0.00 2.39
4433 6597 4.096532 TGCAAAAACCAACGTTCACTCATA 59.903 37.500 0.00 0.00 0.00 2.15
4434 6598 3.119316 TGCAAAAACCAACGTTCACTCAT 60.119 39.130 0.00 0.00 0.00 2.90
4435 6599 2.229062 TGCAAAAACCAACGTTCACTCA 59.771 40.909 0.00 0.00 0.00 3.41
4436 6600 2.596862 GTGCAAAAACCAACGTTCACTC 59.403 45.455 0.00 0.00 0.00 3.51
4437 6601 2.029828 TGTGCAAAAACCAACGTTCACT 60.030 40.909 0.00 0.00 29.04 3.41
4438 6602 2.329379 TGTGCAAAAACCAACGTTCAC 58.671 42.857 0.00 1.39 0.00 3.18
4439 6603 2.724977 TGTGCAAAAACCAACGTTCA 57.275 40.000 0.00 0.00 0.00 3.18
4440 6604 2.283884 CCATGTGCAAAAACCAACGTTC 59.716 45.455 0.00 0.00 0.00 3.95
4441 6605 2.275318 CCATGTGCAAAAACCAACGTT 58.725 42.857 0.00 0.00 0.00 3.99
4442 6606 1.933247 CCATGTGCAAAAACCAACGT 58.067 45.000 0.00 0.00 0.00 3.99
4443 6607 0.581053 GCCATGTGCAAAAACCAACG 59.419 50.000 0.00 0.00 40.77 4.10
4444 6608 0.943673 GGCCATGTGCAAAAACCAAC 59.056 50.000 0.00 0.00 43.89 3.77
4445 6609 0.835941 AGGCCATGTGCAAAAACCAA 59.164 45.000 5.01 0.00 43.89 3.67
4446 6610 1.709578 TAGGCCATGTGCAAAAACCA 58.290 45.000 5.01 0.00 43.89 3.67
4447 6611 2.028203 ACATAGGCCATGTGCAAAAACC 60.028 45.455 16.85 0.00 46.41 3.27
4448 6612 3.317603 ACATAGGCCATGTGCAAAAAC 57.682 42.857 16.85 0.00 46.41 2.43
4457 6621 4.275196 CACTGATCAAGAACATAGGCCATG 59.725 45.833 5.01 9.62 40.78 3.66
4458 6622 4.164796 TCACTGATCAAGAACATAGGCCAT 59.835 41.667 5.01 0.00 0.00 4.40
4459 6623 3.519107 TCACTGATCAAGAACATAGGCCA 59.481 43.478 5.01 0.00 0.00 5.36
4460 6624 4.142609 TCACTGATCAAGAACATAGGCC 57.857 45.455 0.00 0.00 0.00 5.19
4461 6625 7.976135 AATATCACTGATCAAGAACATAGGC 57.024 36.000 0.00 0.00 0.00 3.93
4493 6657 7.110155 TGTGCATACTATCCGAGAGTATCATA 58.890 38.462 11.92 9.20 37.91 2.15
4494 6658 5.946377 TGTGCATACTATCCGAGAGTATCAT 59.054 40.000 11.92 0.00 37.91 2.45
4495 6659 5.313712 TGTGCATACTATCCGAGAGTATCA 58.686 41.667 11.92 10.45 37.91 2.15
4496 6660 5.881777 TGTGCATACTATCCGAGAGTATC 57.118 43.478 11.92 8.48 37.91 2.24
4498 6662 4.082733 GCATGTGCATACTATCCGAGAGTA 60.083 45.833 5.38 5.38 41.59 2.59
4504 6668 1.270785 TGGGCATGTGCATACTATCCG 60.271 52.381 7.36 0.00 44.36 4.18
4532 6696 2.556622 CAACAAAAATACCGGAGCCAGT 59.443 45.455 9.46 0.00 0.00 4.00
4535 6699 3.243602 ACAACAACAAAAATACCGGAGCC 60.244 43.478 9.46 0.00 0.00 4.70
4611 6775 1.064017 ACCTGTGCTTTTCTTGTCCCA 60.064 47.619 0.00 0.00 0.00 4.37
4612 6776 1.338020 CACCTGTGCTTTTCTTGTCCC 59.662 52.381 0.00 0.00 0.00 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.