Multiple sequence alignment - TraesCS5D01G153400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G153400 chr5D 100.000 3783 0 0 1 3783 241955465 241951683 0.000000e+00 6986.0
1 TraesCS5D01G153400 chr5D 92.784 97 7 0 448 544 262513718 262513814 1.420000e-29 141.0
2 TraesCS5D01G153400 chr5D 97.727 44 1 0 3087 3130 241952342 241952299 4.050000e-10 76.8
3 TraesCS5D01G153400 chr5D 97.727 44 1 0 3124 3167 241952379 241952336 4.050000e-10 76.8
4 TraesCS5D01G153400 chr5A 93.355 1219 47 8 1935 3130 311945602 311944395 0.000000e+00 1772.0
5 TraesCS5D01G153400 chr5A 94.159 1130 42 12 811 1939 311946994 311945888 0.000000e+00 1700.0
6 TraesCS5D01G153400 chr5A 94.856 661 26 3 3124 3783 311944438 311943785 0.000000e+00 1026.0
7 TraesCS5D01G153400 chr5A 89.677 155 12 2 608 758 311947163 311947009 1.070000e-45 195.0
8 TraesCS5D01G153400 chr5B 91.000 1300 83 20 543 1818 256917719 256916430 0.000000e+00 1722.0
9 TraesCS5D01G153400 chr5B 90.817 1089 76 9 2034 3102 256915953 256914869 0.000000e+00 1435.0
10 TraesCS5D01G153400 chr5B 85.740 547 54 7 3142 3677 256914874 256914341 1.190000e-154 556.0
11 TraesCS5D01G153400 chr5B 93.431 137 8 1 218 353 563340498 563340634 6.410000e-48 202.0
12 TraesCS5D01G153400 chr5B 90.385 104 10 0 441 544 191137867 191137764 1.830000e-28 137.0
13 TraesCS5D01G153400 chr5B 100.000 74 0 0 1965 2038 256916230 256916157 1.830000e-28 137.0
14 TraesCS5D01G153400 chr7A 95.489 133 6 0 224 356 634386552 634386684 2.960000e-51 213.0
15 TraesCS5D01G153400 chr6B 95.385 130 6 0 226 355 641950826 641950697 1.380000e-49 207.0
16 TraesCS5D01G153400 chr6B 90.789 152 14 0 227 378 644809023 644808872 1.780000e-48 204.0
17 TraesCS5D01G153400 chr6B 90.000 110 9 2 447 554 205356489 205356380 1.420000e-29 141.0
18 TraesCS5D01G153400 chr6B 91.089 101 9 0 448 548 455427935 455428035 1.830000e-28 137.0
19 TraesCS5D01G153400 chr6A 93.478 138 7 1 227 364 286338841 286338706 1.780000e-48 204.0
20 TraesCS5D01G153400 chr2A 94.656 131 7 0 227 357 221201413 221201283 1.780000e-48 204.0
21 TraesCS5D01G153400 chr2A 83.158 95 6 8 621 705 293150400 293150306 1.130000e-10 78.7
22 TraesCS5D01G153400 chr1B 95.312 128 6 0 226 353 56893363 56893236 1.780000e-48 204.0
23 TraesCS5D01G153400 chr2D 92.754 138 10 0 220 357 445188727 445188590 2.300000e-47 200.0
24 TraesCS5D01G153400 chr3B 92.647 136 10 0 218 353 530239406 530239541 2.980000e-46 196.0
25 TraesCS5D01G153400 chr4D 93.333 105 6 1 442 545 414980705 414980809 1.820000e-33 154.0
26 TraesCS5D01G153400 chr4B 93.814 97 6 0 448 544 332552277 332552373 3.050000e-31 147.0
27 TraesCS5D01G153400 chr7B 90.566 106 10 0 444 549 134634221 134634116 1.420000e-29 141.0
28 TraesCS5D01G153400 chr7B 92.683 41 3 0 619 659 570172576 570172536 4.080000e-05 60.2
29 TraesCS5D01G153400 chr1D 88.696 115 11 2 440 552 225936956 225936842 5.100000e-29 139.0
30 TraesCS5D01G153400 chr1D 89.815 108 9 2 447 552 225944039 225943932 1.830000e-28 137.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G153400 chr5D 241951683 241955465 3782 True 2379.866667 6986 98.484667 1 3783 3 chr5D.!!$R1 3782
1 TraesCS5D01G153400 chr5A 311943785 311947163 3378 True 1173.250000 1772 93.011750 608 3783 4 chr5A.!!$R1 3175
2 TraesCS5D01G153400 chr5B 256914341 256917719 3378 True 962.500000 1722 91.889250 543 3677 4 chr5B.!!$R2 3134

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
980 1027 0.034896 CGTATAAATGGCGGGCTCCT 59.965 55.0 2.38 0.0 0.00 3.69 F
1315 1364 0.039978 CTCCTGATCCGATTCGACCG 60.040 60.0 7.83 0.0 0.00 4.79 F
2147 2694 0.177836 CATCCATGTGCGGTAGACCA 59.822 55.0 0.00 0.0 35.14 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2425 2977 0.030369 CGCCGTTAGACCGAGCTTAT 59.970 55.0 0.00 0.0 0.00 1.73 R
2749 3301 0.603569 AGCCTATGCCGGAGTAATCG 59.396 55.0 5.05 0.0 38.69 3.34 R
3723 4304 0.519077 CTGAGAGCCAAAGTTTCCGC 59.481 55.0 0.00 0.0 0.00 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.828868 AAGTTGGTGGCAGCTCGA 59.171 55.556 18.53 1.05 0.00 4.04
18 19 1.376466 AAGTTGGTGGCAGCTCGAT 59.624 52.632 18.53 0.00 0.00 3.59
19 20 0.674895 AAGTTGGTGGCAGCTCGATC 60.675 55.000 18.53 4.00 0.00 3.69
20 21 1.078848 GTTGGTGGCAGCTCGATCT 60.079 57.895 18.53 0.00 0.00 2.75
21 22 0.175760 GTTGGTGGCAGCTCGATCTA 59.824 55.000 18.53 0.00 0.00 1.98
22 23 0.461548 TTGGTGGCAGCTCGATCTAG 59.538 55.000 18.53 0.00 0.00 2.43
23 24 1.365633 GGTGGCAGCTCGATCTAGG 59.634 63.158 9.90 0.00 0.00 3.02
24 25 1.365633 GTGGCAGCTCGATCTAGGG 59.634 63.158 0.00 0.00 0.00 3.53
25 26 1.075970 TGGCAGCTCGATCTAGGGT 60.076 57.895 0.00 0.00 0.00 4.34
26 27 1.109920 TGGCAGCTCGATCTAGGGTC 61.110 60.000 0.00 0.00 0.00 4.46
27 28 1.663173 GCAGCTCGATCTAGGGTCC 59.337 63.158 0.00 0.00 0.00 4.46
28 29 1.811645 GCAGCTCGATCTAGGGTCCC 61.812 65.000 0.00 0.00 0.00 4.46
29 30 1.154221 AGCTCGATCTAGGGTCCCC 59.846 63.158 3.51 0.00 0.00 4.81
30 31 1.909287 GCTCGATCTAGGGTCCCCC 60.909 68.421 3.51 0.00 45.90 5.40
61 62 4.827087 CGCGCTCCACCTCATGCT 62.827 66.667 5.56 0.00 0.00 3.79
62 63 2.437359 GCGCTCCACCTCATGCTT 60.437 61.111 0.00 0.00 0.00 3.91
63 64 2.758089 GCGCTCCACCTCATGCTTG 61.758 63.158 0.00 0.00 0.00 4.01
64 65 1.078918 CGCTCCACCTCATGCTTGA 60.079 57.895 1.92 1.92 0.00 3.02
73 74 2.486472 CTCATGCTTGAGGGTCTTGT 57.514 50.000 19.36 0.00 44.78 3.16
74 75 3.616956 CTCATGCTTGAGGGTCTTGTA 57.383 47.619 19.36 0.00 44.78 2.41
75 76 4.148128 CTCATGCTTGAGGGTCTTGTAT 57.852 45.455 19.36 0.00 44.78 2.29
76 77 4.521146 CTCATGCTTGAGGGTCTTGTATT 58.479 43.478 19.36 0.00 44.78 1.89
77 78 4.922206 TCATGCTTGAGGGTCTTGTATTT 58.078 39.130 0.00 0.00 0.00 1.40
78 79 5.324409 TCATGCTTGAGGGTCTTGTATTTT 58.676 37.500 0.00 0.00 0.00 1.82
79 80 5.183713 TCATGCTTGAGGGTCTTGTATTTTG 59.816 40.000 0.00 0.00 0.00 2.44
80 81 3.826157 TGCTTGAGGGTCTTGTATTTTGG 59.174 43.478 0.00 0.00 0.00 3.28
81 82 3.367395 GCTTGAGGGTCTTGTATTTTGGC 60.367 47.826 0.00 0.00 0.00 4.52
82 83 3.517296 TGAGGGTCTTGTATTTTGGCA 57.483 42.857 0.00 0.00 0.00 4.92
83 84 3.153919 TGAGGGTCTTGTATTTTGGCAC 58.846 45.455 0.00 0.00 0.00 5.01
84 85 3.153919 GAGGGTCTTGTATTTTGGCACA 58.846 45.455 0.00 0.00 0.00 4.57
85 86 3.763897 GAGGGTCTTGTATTTTGGCACAT 59.236 43.478 0.00 0.00 39.30 3.21
86 87 4.929479 AGGGTCTTGTATTTTGGCACATA 58.071 39.130 0.00 0.00 39.30 2.29
87 88 5.518865 AGGGTCTTGTATTTTGGCACATAT 58.481 37.500 0.00 0.00 39.30 1.78
88 89 5.360714 AGGGTCTTGTATTTTGGCACATATG 59.639 40.000 0.00 0.00 39.30 1.78
89 90 5.127031 GGGTCTTGTATTTTGGCACATATGT 59.873 40.000 1.41 1.41 39.30 2.29
90 91 6.350949 GGGTCTTGTATTTTGGCACATATGTT 60.351 38.462 5.37 0.00 39.30 2.71
91 92 7.096551 GGTCTTGTATTTTGGCACATATGTTT 58.903 34.615 5.37 0.00 39.30 2.83
92 93 7.602265 GGTCTTGTATTTTGGCACATATGTTTT 59.398 33.333 5.37 0.00 39.30 2.43
93 94 8.434661 GTCTTGTATTTTGGCACATATGTTTTG 58.565 33.333 5.37 0.00 39.30 2.44
94 95 6.718454 TGTATTTTGGCACATATGTTTTGC 57.282 33.333 5.37 6.94 39.30 3.68
95 96 6.226052 TGTATTTTGGCACATATGTTTTGCA 58.774 32.000 16.08 0.00 39.30 4.08
96 97 6.877855 TGTATTTTGGCACATATGTTTTGCAT 59.122 30.769 16.08 6.05 39.30 3.96
97 98 6.821031 ATTTTGGCACATATGTTTTGCATT 57.179 29.167 16.08 0.00 39.30 3.56
98 99 6.630444 TTTTGGCACATATGTTTTGCATTT 57.370 29.167 16.08 0.00 39.30 2.32
99 100 5.859521 TTGGCACATATGTTTTGCATTTC 57.140 34.783 16.08 2.69 39.30 2.17
100 101 5.149973 TGGCACATATGTTTTGCATTTCT 57.850 34.783 16.08 0.00 38.94 2.52
101 102 5.549347 TGGCACATATGTTTTGCATTTCTT 58.451 33.333 16.08 0.00 38.94 2.52
102 103 5.996513 TGGCACATATGTTTTGCATTTCTTT 59.003 32.000 16.08 0.00 38.94 2.52
103 104 6.485984 TGGCACATATGTTTTGCATTTCTTTT 59.514 30.769 16.08 0.00 38.94 2.27
104 105 7.017055 GGCACATATGTTTTGCATTTCTTTTC 58.983 34.615 16.08 0.00 38.94 2.29
105 106 6.733280 GCACATATGTTTTGCATTTCTTTTCG 59.267 34.615 5.37 0.00 38.94 3.46
106 107 7.228840 CACATATGTTTTGCATTTCTTTTCGG 58.771 34.615 5.37 0.00 38.94 4.30
107 108 6.928492 ACATATGTTTTGCATTTCTTTTCGGT 59.072 30.769 1.41 0.00 38.94 4.69
108 109 8.085296 ACATATGTTTTGCATTTCTTTTCGGTA 58.915 29.630 1.41 0.00 38.94 4.02
109 110 8.920665 CATATGTTTTGCATTTCTTTTCGGTAA 58.079 29.630 0.00 0.00 38.94 2.85
110 111 7.961325 ATGTTTTGCATTTCTTTTCGGTAAT 57.039 28.000 0.00 0.00 33.14 1.89
111 112 7.778470 TGTTTTGCATTTCTTTTCGGTAATT 57.222 28.000 0.00 0.00 0.00 1.40
112 113 8.202745 TGTTTTGCATTTCTTTTCGGTAATTT 57.797 26.923 0.00 0.00 0.00 1.82
113 114 9.314321 TGTTTTGCATTTCTTTTCGGTAATTTA 57.686 25.926 0.00 0.00 0.00 1.40
116 117 9.921637 TTTGCATTTCTTTTCGGTAATTTATCT 57.078 25.926 0.00 0.00 0.00 1.98
117 118 8.909708 TGCATTTCTTTTCGGTAATTTATCTG 57.090 30.769 0.00 0.00 0.00 2.90
118 119 8.519526 TGCATTTCTTTTCGGTAATTTATCTGT 58.480 29.630 0.00 0.00 0.00 3.41
119 120 8.798153 GCATTTCTTTTCGGTAATTTATCTGTG 58.202 33.333 0.00 0.00 0.00 3.66
120 121 9.840427 CATTTCTTTTCGGTAATTTATCTGTGT 57.160 29.630 0.00 0.00 0.00 3.72
125 126 9.632969 CTTTTCGGTAATTTATCTGTGTATTCG 57.367 33.333 0.00 0.00 0.00 3.34
126 127 8.706492 TTTCGGTAATTTATCTGTGTATTCGT 57.294 30.769 0.00 0.00 0.00 3.85
127 128 8.706492 TTCGGTAATTTATCTGTGTATTCGTT 57.294 30.769 0.00 0.00 0.00 3.85
128 129 8.706492 TCGGTAATTTATCTGTGTATTCGTTT 57.294 30.769 0.00 0.00 0.00 3.60
129 130 8.810427 TCGGTAATTTATCTGTGTATTCGTTTC 58.190 33.333 0.00 0.00 0.00 2.78
130 131 8.814235 CGGTAATTTATCTGTGTATTCGTTTCT 58.186 33.333 0.00 0.00 0.00 2.52
131 132 9.916397 GGTAATTTATCTGTGTATTCGTTTCTG 57.084 33.333 0.00 0.00 0.00 3.02
132 133 9.916397 GTAATTTATCTGTGTATTCGTTTCTGG 57.084 33.333 0.00 0.00 0.00 3.86
133 134 8.561738 AATTTATCTGTGTATTCGTTTCTGGT 57.438 30.769 0.00 0.00 0.00 4.00
134 135 9.661563 AATTTATCTGTGTATTCGTTTCTGGTA 57.338 29.630 0.00 0.00 0.00 3.25
135 136 9.661563 ATTTATCTGTGTATTCGTTTCTGGTAA 57.338 29.630 0.00 0.00 0.00 2.85
136 137 9.491675 TTTATCTGTGTATTCGTTTCTGGTAAA 57.508 29.630 0.00 0.00 0.00 2.01
137 138 7.972832 ATCTGTGTATTCGTTTCTGGTAAAA 57.027 32.000 0.00 0.00 0.00 1.52
138 139 7.789273 TCTGTGTATTCGTTTCTGGTAAAAA 57.211 32.000 0.00 0.00 0.00 1.94
168 169 9.211485 TGTGATAAATATGATAGCACACATCTG 57.789 33.333 13.08 0.00 42.73 2.90
169 170 9.212641 GTGATAAATATGATAGCACACATCTGT 57.787 33.333 10.63 0.00 39.00 3.41
170 171 9.428097 TGATAAATATGATAGCACACATCTGTC 57.572 33.333 0.00 0.00 0.00 3.51
171 172 9.650539 GATAAATATGATAGCACACATCTGTCT 57.349 33.333 0.00 0.00 0.00 3.41
172 173 7.959689 AAATATGATAGCACACATCTGTCTC 57.040 36.000 0.00 0.00 0.00 3.36
173 174 3.808466 TGATAGCACACATCTGTCTCC 57.192 47.619 0.00 0.00 0.00 3.71
174 175 2.099756 TGATAGCACACATCTGTCTCCG 59.900 50.000 0.00 0.00 0.00 4.63
175 176 0.173481 TAGCACACATCTGTCTCCGC 59.827 55.000 0.00 0.00 0.00 5.54
176 177 1.079543 GCACACATCTGTCTCCGCT 60.080 57.895 0.00 0.00 0.00 5.52
177 178 1.080995 GCACACATCTGTCTCCGCTC 61.081 60.000 0.00 0.00 0.00 5.03
178 179 0.244721 CACACATCTGTCTCCGCTCA 59.755 55.000 0.00 0.00 0.00 4.26
179 180 0.529833 ACACATCTGTCTCCGCTCAG 59.470 55.000 0.00 0.00 0.00 3.35
180 181 0.805322 CACATCTGTCTCCGCTCAGC 60.805 60.000 0.00 0.00 0.00 4.26
181 182 0.969917 ACATCTGTCTCCGCTCAGCT 60.970 55.000 0.00 0.00 0.00 4.24
182 183 1.028130 CATCTGTCTCCGCTCAGCTA 58.972 55.000 0.00 0.00 0.00 3.32
183 184 1.001487 CATCTGTCTCCGCTCAGCTAG 60.001 57.143 0.00 0.00 0.00 3.42
228 229 8.997621 TGGAACAACAGTTTACTATCATCTAC 57.002 34.615 0.00 0.00 31.92 2.59
229 230 8.812972 TGGAACAACAGTTTACTATCATCTACT 58.187 33.333 0.00 0.00 31.92 2.57
230 231 9.303537 GGAACAACAGTTTACTATCATCTACTC 57.696 37.037 0.00 0.00 0.00 2.59
231 232 9.303537 GAACAACAGTTTACTATCATCTACTCC 57.696 37.037 0.00 0.00 0.00 3.85
232 233 8.596781 ACAACAGTTTACTATCATCTACTCCT 57.403 34.615 0.00 0.00 0.00 3.69
233 234 9.036980 ACAACAGTTTACTATCATCTACTCCTT 57.963 33.333 0.00 0.00 0.00 3.36
234 235 9.522804 CAACAGTTTACTATCATCTACTCCTTC 57.477 37.037 0.00 0.00 0.00 3.46
235 236 8.240267 ACAGTTTACTATCATCTACTCCTTCC 57.760 38.462 0.00 0.00 0.00 3.46
236 237 7.839705 ACAGTTTACTATCATCTACTCCTTCCA 59.160 37.037 0.00 0.00 0.00 3.53
237 238 8.865090 CAGTTTACTATCATCTACTCCTTCCAT 58.135 37.037 0.00 0.00 0.00 3.41
238 239 9.084533 AGTTTACTATCATCTACTCCTTCCATC 57.915 37.037 0.00 0.00 0.00 3.51
239 240 8.308207 GTTTACTATCATCTACTCCTTCCATCC 58.692 40.741 0.00 0.00 0.00 3.51
240 241 5.970289 ACTATCATCTACTCCTTCCATCCA 58.030 41.667 0.00 0.00 0.00 3.41
241 242 6.015918 ACTATCATCTACTCCTTCCATCCAG 58.984 44.000 0.00 0.00 0.00 3.86
242 243 4.542906 TCATCTACTCCTTCCATCCAGA 57.457 45.455 0.00 0.00 0.00 3.86
243 244 4.883759 TCATCTACTCCTTCCATCCAGAA 58.116 43.478 0.00 0.00 0.00 3.02
244 245 5.280499 TCATCTACTCCTTCCATCCAGAAA 58.720 41.667 0.00 0.00 0.00 2.52
245 246 5.907662 TCATCTACTCCTTCCATCCAGAAAT 59.092 40.000 0.00 0.00 0.00 2.17
246 247 7.075797 TCATCTACTCCTTCCATCCAGAAATA 58.924 38.462 0.00 0.00 0.00 1.40
247 248 6.732896 TCTACTCCTTCCATCCAGAAATAC 57.267 41.667 0.00 0.00 0.00 1.89
248 249 6.444704 TCTACTCCTTCCATCCAGAAATACT 58.555 40.000 0.00 0.00 0.00 2.12
249 250 6.903534 TCTACTCCTTCCATCCAGAAATACTT 59.096 38.462 0.00 0.00 0.00 2.24
250 251 8.065627 TCTACTCCTTCCATCCAGAAATACTTA 58.934 37.037 0.00 0.00 0.00 2.24
251 252 7.698163 ACTCCTTCCATCCAGAAATACTTAT 57.302 36.000 0.00 0.00 0.00 1.73
252 253 7.740805 ACTCCTTCCATCCAGAAATACTTATC 58.259 38.462 0.00 0.00 0.00 1.75
253 254 7.348274 ACTCCTTCCATCCAGAAATACTTATCA 59.652 37.037 0.00 0.00 0.00 2.15
254 255 8.280258 TCCTTCCATCCAGAAATACTTATCAT 57.720 34.615 0.00 0.00 0.00 2.45
255 256 8.378565 TCCTTCCATCCAGAAATACTTATCATC 58.621 37.037 0.00 0.00 0.00 2.92
256 257 8.159447 CCTTCCATCCAGAAATACTTATCATCA 58.841 37.037 0.00 0.00 0.00 3.07
257 258 9.565090 CTTCCATCCAGAAATACTTATCATCAA 57.435 33.333 0.00 0.00 0.00 2.57
258 259 9.919416 TTCCATCCAGAAATACTTATCATCAAA 57.081 29.630 0.00 0.00 0.00 2.69
259 260 9.919416 TCCATCCAGAAATACTTATCATCAAAA 57.081 29.630 0.00 0.00 0.00 2.44
276 277 8.378115 TCATCAAAATGAATAAAAGGGGATGT 57.622 30.769 0.00 0.00 38.97 3.06
277 278 9.486123 TCATCAAAATGAATAAAAGGGGATGTA 57.514 29.630 0.00 0.00 38.97 2.29
280 281 9.713684 TCAAAATGAATAAAAGGGGATGTATCT 57.286 29.630 0.00 0.00 0.00 1.98
286 287 9.170890 TGAATAAAAGGGGATGTATCTAGATGT 57.829 33.333 15.79 1.25 0.00 3.06
294 295 9.845214 AGGGGATGTATCTAGATGTATTTTAGT 57.155 33.333 15.79 0.00 0.00 2.24
316 317 9.886132 TTAGTTCTAGATACATCCCTTTTTGTC 57.114 33.333 0.00 0.00 0.00 3.18
317 318 7.339482 AGTTCTAGATACATCCCTTTTTGTCC 58.661 38.462 0.00 0.00 0.00 4.02
318 319 6.884472 TCTAGATACATCCCTTTTTGTCCA 57.116 37.500 0.00 0.00 0.00 4.02
319 320 7.451731 TCTAGATACATCCCTTTTTGTCCAT 57.548 36.000 0.00 0.00 0.00 3.41
320 321 7.872138 TCTAGATACATCCCTTTTTGTCCATT 58.128 34.615 0.00 0.00 0.00 3.16
321 322 8.336235 TCTAGATACATCCCTTTTTGTCCATTT 58.664 33.333 0.00 0.00 0.00 2.32
322 323 7.797121 AGATACATCCCTTTTTGTCCATTTT 57.203 32.000 0.00 0.00 0.00 1.82
323 324 7.614494 AGATACATCCCTTTTTGTCCATTTTG 58.386 34.615 0.00 0.00 0.00 2.44
324 325 5.885449 ACATCCCTTTTTGTCCATTTTGA 57.115 34.783 0.00 0.00 0.00 2.69
325 326 6.438186 ACATCCCTTTTTGTCCATTTTGAT 57.562 33.333 0.00 0.00 0.00 2.57
326 327 6.232692 ACATCCCTTTTTGTCCATTTTGATG 58.767 36.000 0.00 0.00 33.80 3.07
327 328 5.226194 TCCCTTTTTGTCCATTTTGATGG 57.774 39.130 0.00 0.00 43.01 3.51
328 329 3.752747 CCCTTTTTGTCCATTTTGATGGC 59.247 43.478 0.52 0.00 41.43 4.40
329 330 4.387598 CCTTTTTGTCCATTTTGATGGCA 58.612 39.130 0.00 0.00 41.43 4.92
330 331 4.820716 CCTTTTTGTCCATTTTGATGGCAA 59.179 37.500 0.00 6.03 41.43 4.52
331 332 5.298777 CCTTTTTGTCCATTTTGATGGCAAA 59.701 36.000 16.63 16.63 41.39 3.68
332 333 6.016108 CCTTTTTGTCCATTTTGATGGCAAAT 60.016 34.615 19.08 0.00 43.07 2.32
333 334 7.174599 CCTTTTTGTCCATTTTGATGGCAAATA 59.825 33.333 19.08 15.70 43.07 1.40
334 335 8.632906 TTTTTGTCCATTTTGATGGCAAATAT 57.367 26.923 19.08 0.70 43.07 1.28
335 336 8.632906 TTTTGTCCATTTTGATGGCAAATATT 57.367 26.923 19.08 0.00 43.07 1.28
336 337 8.632906 TTTGTCCATTTTGATGGCAAATATTT 57.367 26.923 16.63 0.00 43.07 1.40
337 338 8.632906 TTGTCCATTTTGATGGCAAATATTTT 57.367 26.923 0.00 0.00 43.07 1.82
338 339 8.266392 TGTCCATTTTGATGGCAAATATTTTC 57.734 30.769 0.00 0.00 43.07 2.29
339 340 7.064371 TGTCCATTTTGATGGCAAATATTTTCG 59.936 33.333 0.00 0.00 43.07 3.46
340 341 6.538021 TCCATTTTGATGGCAAATATTTTCGG 59.462 34.615 0.00 0.00 43.07 4.30
341 342 6.538021 CCATTTTGATGGCAAATATTTTCGGA 59.462 34.615 0.00 0.00 43.07 4.55
342 343 6.959671 TTTTGATGGCAAATATTTTCGGAC 57.040 33.333 0.00 0.00 43.07 4.79
343 344 4.285807 TGATGGCAAATATTTTCGGACG 57.714 40.909 0.00 0.00 0.00 4.79
344 345 3.942115 TGATGGCAAATATTTTCGGACGA 59.058 39.130 0.00 0.00 0.00 4.20
345 346 4.396478 TGATGGCAAATATTTTCGGACGAA 59.604 37.500 2.62 2.62 0.00 3.85
346 347 4.349663 TGGCAAATATTTTCGGACGAAG 57.650 40.909 7.25 0.00 35.38 3.79
347 348 3.127895 TGGCAAATATTTTCGGACGAAGG 59.872 43.478 7.25 0.00 35.38 3.46
348 349 3.488553 GGCAAATATTTTCGGACGAAGGG 60.489 47.826 7.25 0.00 35.38 3.95
349 350 3.375922 GCAAATATTTTCGGACGAAGGGA 59.624 43.478 7.25 0.00 35.38 4.20
350 351 4.495844 GCAAATATTTTCGGACGAAGGGAG 60.496 45.833 7.25 0.00 35.38 4.30
351 352 4.482952 AATATTTTCGGACGAAGGGAGT 57.517 40.909 7.25 0.00 35.38 3.85
352 353 5.603170 AATATTTTCGGACGAAGGGAGTA 57.397 39.130 7.25 0.00 35.38 2.59
353 354 5.803237 ATATTTTCGGACGAAGGGAGTAT 57.197 39.130 7.25 0.00 35.38 2.12
354 355 6.906157 ATATTTTCGGACGAAGGGAGTATA 57.094 37.500 7.25 2.06 35.38 1.47
355 356 5.803237 ATTTTCGGACGAAGGGAGTATAT 57.197 39.130 7.25 0.00 35.38 0.86
356 357 6.906157 ATTTTCGGACGAAGGGAGTATATA 57.094 37.500 7.25 0.00 35.38 0.86
357 358 6.713762 TTTTCGGACGAAGGGAGTATATAA 57.286 37.500 7.25 0.00 35.38 0.98
358 359 5.695851 TTCGGACGAAGGGAGTATATAAC 57.304 43.478 2.62 0.00 0.00 1.89
359 360 3.748048 TCGGACGAAGGGAGTATATAACG 59.252 47.826 0.00 0.00 0.00 3.18
360 361 3.499918 CGGACGAAGGGAGTATATAACGT 59.500 47.826 0.00 0.00 35.53 3.99
361 362 4.023707 CGGACGAAGGGAGTATATAACGTT 60.024 45.833 5.88 5.88 33.10 3.99
362 363 5.506317 CGGACGAAGGGAGTATATAACGTTT 60.506 44.000 5.91 0.00 33.10 3.60
363 364 6.276091 GGACGAAGGGAGTATATAACGTTTT 58.724 40.000 5.91 0.02 33.10 2.43
364 365 7.425606 GGACGAAGGGAGTATATAACGTTTTA 58.574 38.462 5.91 2.96 33.10 1.52
365 366 7.379797 GGACGAAGGGAGTATATAACGTTTTAC 59.620 40.741 5.91 6.86 33.10 2.01
366 367 7.771183 ACGAAGGGAGTATATAACGTTTTACA 58.229 34.615 5.91 0.00 0.00 2.41
367 368 8.416329 ACGAAGGGAGTATATAACGTTTTACAT 58.584 33.333 5.91 0.00 0.00 2.29
368 369 9.897744 CGAAGGGAGTATATAACGTTTTACATA 57.102 33.333 5.91 0.00 0.00 2.29
431 432 8.454570 AAACATGCATACATACATCTGATTCA 57.545 30.769 0.00 0.00 33.67 2.57
432 433 7.668525 ACATGCATACATACATCTGATTCAG 57.331 36.000 7.38 7.38 33.67 3.02
433 434 7.447594 ACATGCATACATACATCTGATTCAGA 58.552 34.615 18.29 18.29 38.74 3.27
434 435 7.603024 ACATGCATACATACATCTGATTCAGAG 59.397 37.037 20.35 14.53 38.17 3.35
435 436 7.294017 TGCATACATACATCTGATTCAGAGA 57.706 36.000 20.35 9.70 44.08 3.10
436 437 7.729116 TGCATACATACATCTGATTCAGAGAA 58.271 34.615 20.35 9.55 44.08 2.87
437 438 8.206189 TGCATACATACATCTGATTCAGAGAAA 58.794 33.333 20.35 9.23 44.08 2.52
438 439 8.710551 GCATACATACATCTGATTCAGAGAAAG 58.289 37.037 20.35 12.69 44.08 2.62
439 440 9.761504 CATACATACATCTGATTCAGAGAAAGT 57.238 33.333 20.35 16.80 44.08 2.66
446 447 9.342308 ACATCTGATTCAGAGAAAGTTAAAACA 57.658 29.630 20.35 0.00 44.08 2.83
452 453 9.959775 GATTCAGAGAAAGTTAAAACATACTCG 57.040 33.333 0.00 0.00 32.77 4.18
453 454 7.347508 TCAGAGAAAGTTAAAACATACTCGC 57.652 36.000 0.00 0.00 32.77 5.03
454 455 7.152645 TCAGAGAAAGTTAAAACATACTCGCT 58.847 34.615 0.00 0.00 32.77 4.93
455 456 7.328737 TCAGAGAAAGTTAAAACATACTCGCTC 59.671 37.037 0.00 0.00 32.77 5.03
456 457 6.590677 AGAGAAAGTTAAAACATACTCGCTCC 59.409 38.462 0.00 0.00 32.77 4.70
457 458 5.347907 AGAAAGTTAAAACATACTCGCTCCG 59.652 40.000 0.00 0.00 0.00 4.63
458 459 4.184079 AGTTAAAACATACTCGCTCCGT 57.816 40.909 0.00 0.00 0.00 4.69
459 460 4.171754 AGTTAAAACATACTCGCTCCGTC 58.828 43.478 0.00 0.00 0.00 4.79
460 461 2.005971 AAAACATACTCGCTCCGTCC 57.994 50.000 0.00 0.00 0.00 4.79
461 462 0.175073 AAACATACTCGCTCCGTCCC 59.825 55.000 0.00 0.00 0.00 4.46
462 463 0.968901 AACATACTCGCTCCGTCCCA 60.969 55.000 0.00 0.00 0.00 4.37
463 464 0.968901 ACATACTCGCTCCGTCCCAA 60.969 55.000 0.00 0.00 0.00 4.12
464 465 0.174845 CATACTCGCTCCGTCCCAAA 59.825 55.000 0.00 0.00 0.00 3.28
465 466 0.899720 ATACTCGCTCCGTCCCAAAA 59.100 50.000 0.00 0.00 0.00 2.44
466 467 0.899720 TACTCGCTCCGTCCCAAAAT 59.100 50.000 0.00 0.00 0.00 1.82
467 468 0.899720 ACTCGCTCCGTCCCAAAATA 59.100 50.000 0.00 0.00 0.00 1.40
468 469 1.276989 ACTCGCTCCGTCCCAAAATAA 59.723 47.619 0.00 0.00 0.00 1.40
469 470 1.933853 CTCGCTCCGTCCCAAAATAAG 59.066 52.381 0.00 0.00 0.00 1.73
470 471 1.276989 TCGCTCCGTCCCAAAATAAGT 59.723 47.619 0.00 0.00 0.00 2.24
471 472 1.396996 CGCTCCGTCCCAAAATAAGTG 59.603 52.381 0.00 0.00 0.00 3.16
472 473 2.433436 GCTCCGTCCCAAAATAAGTGT 58.567 47.619 0.00 0.00 0.00 3.55
473 474 2.418976 GCTCCGTCCCAAAATAAGTGTC 59.581 50.000 0.00 0.00 0.00 3.67
474 475 3.868754 GCTCCGTCCCAAAATAAGTGTCT 60.869 47.826 0.00 0.00 0.00 3.41
475 476 4.324267 CTCCGTCCCAAAATAAGTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
476 477 4.069304 TCCGTCCCAAAATAAGTGTCTTG 58.931 43.478 0.00 0.00 0.00 3.02
477 478 4.069304 CCGTCCCAAAATAAGTGTCTTGA 58.931 43.478 0.00 0.00 0.00 3.02
478 479 4.083484 CCGTCCCAAAATAAGTGTCTTGAC 60.083 45.833 0.00 0.00 0.00 3.18
479 480 4.083484 CGTCCCAAAATAAGTGTCTTGACC 60.083 45.833 0.00 0.00 0.00 4.02
480 481 5.070685 GTCCCAAAATAAGTGTCTTGACCT 58.929 41.667 0.00 0.00 0.00 3.85
481 482 5.535030 GTCCCAAAATAAGTGTCTTGACCTT 59.465 40.000 0.00 4.52 0.00 3.50
482 483 6.713450 GTCCCAAAATAAGTGTCTTGACCTTA 59.287 38.462 11.29 11.29 0.00 2.69
483 484 6.940298 TCCCAAAATAAGTGTCTTGACCTTAG 59.060 38.462 13.13 0.00 0.00 2.18
484 485 6.715264 CCCAAAATAAGTGTCTTGACCTTAGT 59.285 38.462 13.13 9.86 0.00 2.24
485 486 7.881232 CCCAAAATAAGTGTCTTGACCTTAGTA 59.119 37.037 13.13 0.23 0.00 1.82
486 487 8.718734 CCAAAATAAGTGTCTTGACCTTAGTAC 58.281 37.037 13.13 0.00 0.00 2.73
487 488 9.268268 CAAAATAAGTGTCTTGACCTTAGTACA 57.732 33.333 0.00 0.00 0.00 2.90
488 489 9.841295 AAAATAAGTGTCTTGACCTTAGTACAA 57.159 29.630 0.00 0.00 0.00 2.41
489 490 9.841295 AAATAAGTGTCTTGACCTTAGTACAAA 57.159 29.630 0.00 0.00 0.00 2.83
492 493 8.747538 AAGTGTCTTGACCTTAGTACAAATTT 57.252 30.769 0.00 0.00 0.00 1.82
493 494 9.841295 AAGTGTCTTGACCTTAGTACAAATTTA 57.159 29.630 0.00 0.00 0.00 1.40
516 517 9.496873 TTTATACTAAAGCTAGTGCAAAGTTGA 57.503 29.630 0.00 0.00 38.85 3.18
517 518 5.931441 ACTAAAGCTAGTGCAAAGTTGAG 57.069 39.130 0.00 0.00 42.74 3.02
518 519 5.611374 ACTAAAGCTAGTGCAAAGTTGAGA 58.389 37.500 0.00 0.00 42.74 3.27
519 520 4.820284 AAAGCTAGTGCAAAGTTGAGAC 57.180 40.909 0.00 0.00 42.74 3.36
520 521 3.475566 AGCTAGTGCAAAGTTGAGACA 57.524 42.857 0.00 0.00 42.74 3.41
521 522 3.134458 AGCTAGTGCAAAGTTGAGACAC 58.866 45.455 0.00 0.00 42.74 3.67
522 523 3.134458 GCTAGTGCAAAGTTGAGACACT 58.866 45.455 0.00 0.00 43.60 3.55
523 524 3.561725 GCTAGTGCAAAGTTGAGACACTT 59.438 43.478 7.72 0.00 41.56 3.16
524 525 4.750098 GCTAGTGCAAAGTTGAGACACTTA 59.250 41.667 7.72 0.00 41.56 2.24
525 526 5.409826 GCTAGTGCAAAGTTGAGACACTTAT 59.590 40.000 7.72 0.00 41.56 1.73
526 527 6.073003 GCTAGTGCAAAGTTGAGACACTTATT 60.073 38.462 7.72 0.00 41.56 1.40
527 528 6.305693 AGTGCAAAGTTGAGACACTTATTC 57.694 37.500 0.00 0.00 38.38 1.75
528 529 6.058183 AGTGCAAAGTTGAGACACTTATTCT 58.942 36.000 0.00 0.00 38.38 2.40
529 530 6.017605 AGTGCAAAGTTGAGACACTTATTCTG 60.018 38.462 0.00 0.00 38.38 3.02
530 531 5.239306 TGCAAAGTTGAGACACTTATTCTGG 59.761 40.000 0.00 0.00 35.87 3.86
531 532 5.335191 GCAAAGTTGAGACACTTATTCTGGG 60.335 44.000 0.00 0.00 35.87 4.45
532 533 5.825593 AAGTTGAGACACTTATTCTGGGA 57.174 39.130 0.00 0.00 35.10 4.37
533 534 5.153950 AGTTGAGACACTTATTCTGGGAC 57.846 43.478 0.00 0.00 0.00 4.46
534 535 4.593206 AGTTGAGACACTTATTCTGGGACA 59.407 41.667 0.00 0.00 0.00 4.02
535 536 6.742644 AAGTTGAGACACTTATTCTGGGACAG 60.743 42.308 0.00 0.00 46.18 3.51
574 575 5.723672 TGGAACAAAGAGAGTACTACCTG 57.276 43.478 0.00 0.00 31.92 4.00
577 578 5.336610 GGAACAAAGAGAGTACTACCTGTCC 60.337 48.000 0.00 0.00 0.00 4.02
730 770 5.181056 ACTTTGATGTGTGTTTCATATGCGA 59.819 36.000 0.00 0.00 0.00 5.10
740 780 6.423302 TGTGTTTCATATGCGAGCAAATTTTT 59.577 30.769 0.57 0.00 0.00 1.94
753 793 7.375781 CGAGCAAATTTTTACGATGAAATGAC 58.624 34.615 0.00 0.00 0.00 3.06
759 799 9.810231 AAATTTTTACGATGAAATGACATTTGC 57.190 25.926 18.00 10.00 31.47 3.68
761 801 3.135414 ACGATGAAATGACATTTGCGG 57.865 42.857 18.00 7.11 31.47 5.69
763 803 3.181507 ACGATGAAATGACATTTGCGGAG 60.182 43.478 18.00 7.96 31.47 4.63
765 805 1.202114 TGAAATGACATTTGCGGAGGC 59.798 47.619 18.00 2.75 40.52 4.70
766 806 0.171007 AAATGACATTTGCGGAGGCG 59.829 50.000 12.62 0.00 44.10 5.52
767 807 1.656818 AATGACATTTGCGGAGGCGG 61.657 55.000 0.00 0.00 44.10 6.13
771 811 4.820744 ATTTGCGGAGGCGGCCAT 62.821 61.111 23.09 6.21 44.10 4.40
777 817 4.467084 GGAGGCGGCCATCGTGAA 62.467 66.667 23.09 0.00 41.72 3.18
778 818 2.435938 GAGGCGGCCATCGTGAAA 60.436 61.111 23.09 0.00 41.72 2.69
779 819 2.033448 AGGCGGCCATCGTGAAAA 59.967 55.556 23.09 0.00 41.72 2.29
780 820 1.376609 GAGGCGGCCATCGTGAAAAT 61.377 55.000 23.09 0.00 41.72 1.82
781 821 0.965363 AGGCGGCCATCGTGAAAATT 60.965 50.000 23.09 0.00 41.72 1.82
782 822 0.108851 GGCGGCCATCGTGAAAATTT 60.109 50.000 15.62 0.00 41.72 1.82
783 823 1.133407 GGCGGCCATCGTGAAAATTTA 59.867 47.619 15.62 0.00 41.72 1.40
784 824 2.182014 GCGGCCATCGTGAAAATTTAC 58.818 47.619 2.24 0.00 41.72 2.01
785 825 2.414824 GCGGCCATCGTGAAAATTTACA 60.415 45.455 2.24 0.00 41.72 2.41
786 826 3.168193 CGGCCATCGTGAAAATTTACAC 58.832 45.455 2.24 0.00 0.00 2.90
891 936 2.859273 AAAGGGTGGATGCGAGCTCG 62.859 60.000 31.37 31.37 43.27 5.03
938 985 3.315191 TCTTCTTTCTTTTCTGTTGGCCG 59.685 43.478 0.00 0.00 0.00 6.13
980 1027 0.034896 CGTATAAATGGCGGGCTCCT 59.965 55.000 2.38 0.00 0.00 3.69
995 1042 2.282446 CCTCCCTCCCGCCTTCTA 59.718 66.667 0.00 0.00 0.00 2.10
1025 1072 1.279527 TTAGCCAACGCGACGAACAG 61.280 55.000 15.93 0.00 41.18 3.16
1089 1137 0.314935 ATTTGGCGGCAACACAAGAG 59.685 50.000 25.48 0.00 34.99 2.85
1098 1146 3.065371 CGGCAACACAAGAGGAATAATCC 59.935 47.826 0.00 0.00 46.98 3.01
1147 1195 1.956629 ATCGATCACCGGCCGTCTTT 61.957 55.000 26.12 5.94 39.14 2.52
1199 1247 1.003355 CGAGCTTTCCCAGGAGCAA 60.003 57.895 1.61 0.00 41.31 3.91
1277 1325 3.057736 GCCCTCGATCAATCAATCCAATG 60.058 47.826 0.00 0.00 0.00 2.82
1278 1326 3.504906 CCCTCGATCAATCAATCCAATGG 59.495 47.826 0.00 0.00 0.00 3.16
1279 1327 4.139786 CCTCGATCAATCAATCCAATGGT 58.860 43.478 0.00 0.00 0.00 3.55
1287 1336 7.161773 TCAATCAATCCAATGGTTCTTCTTC 57.838 36.000 0.00 0.00 0.00 2.87
1291 1340 0.811281 CCAATGGTTCTTCTTCCCGC 59.189 55.000 0.00 0.00 0.00 6.13
1315 1364 0.039978 CTCCTGATCCGATTCGACCG 60.040 60.000 7.83 0.00 0.00 4.79
1766 1815 1.740025 GATGGCAAAGTGAGTACTGCC 59.260 52.381 13.22 13.22 43.07 4.85
1805 1854 3.336568 ACCCTGCTGCCTGCTGAT 61.337 61.111 0.00 0.00 42.27 2.90
1823 1872 5.892686 TGCTGATCAACATTCCATTCCATTA 59.107 36.000 0.00 0.00 0.00 1.90
1835 1884 6.233905 TCCATTCCATTACATTCTTCTCGA 57.766 37.500 0.00 0.00 0.00 4.04
1921 1970 7.541122 AAGGTTCTAAGTAGATCATTTTCGC 57.459 36.000 0.00 0.00 31.40 4.70
2089 2636 0.466124 CCTTGAGAGGATCGGGTTCC 59.534 60.000 0.00 0.00 46.74 3.62
2090 2637 1.195115 CTTGAGAGGATCGGGTTCCA 58.805 55.000 3.38 0.00 42.67 3.53
2147 2694 0.177836 CATCCATGTGCGGTAGACCA 59.822 55.000 0.00 0.00 35.14 4.02
2171 2718 7.641020 CCAAAGTTCAAAAGCATCAAAAACATC 59.359 33.333 0.00 0.00 0.00 3.06
2231 2778 3.360249 AGAGTTGCACAAAGACATTGC 57.640 42.857 0.00 0.00 43.13 3.56
2417 2965 6.295039 TCCAACTGAGTGAAACGAAATAAC 57.705 37.500 0.00 0.00 45.86 1.89
2425 2977 9.588774 CTGAGTGAAACGAAATAACGAAATTTA 57.411 29.630 0.00 0.00 45.86 1.40
2697 3249 8.874816 GCAAGAGTGAAAGACTTTACTTATAGG 58.125 37.037 0.00 0.00 33.83 2.57
2749 3301 4.342862 TCATTGCTCTGGCCTAGAATAC 57.657 45.455 3.32 0.00 37.74 1.89
2764 3316 5.356190 CCTAGAATACGATTACTCCGGCATA 59.644 44.000 0.00 0.00 0.00 3.14
2886 3439 9.849607 GCTAAAACAAAAGTTTCATTAAAGAGC 57.150 29.630 0.00 0.00 0.00 4.09
2968 3539 9.859692 CGAATACCCTCGTTTAAAAGAATAATC 57.140 33.333 5.35 1.69 34.08 1.75
2977 3548 8.557864 TCGTTTAAAAGAATAATCCGTTGAACA 58.442 29.630 1.03 0.00 0.00 3.18
3070 3641 8.733092 TCTGAGGATCCTTTATAGATGTTGAT 57.267 34.615 17.42 0.00 0.00 2.57
3090 3661 6.867519 TGATCTTTATCCAACTACCAGTCA 57.132 37.500 0.00 0.00 0.00 3.41
3091 3662 7.252612 TGATCTTTATCCAACTACCAGTCAA 57.747 36.000 0.00 0.00 0.00 3.18
3092 3663 7.861629 TGATCTTTATCCAACTACCAGTCAAT 58.138 34.615 0.00 0.00 0.00 2.57
3093 3664 8.328758 TGATCTTTATCCAACTACCAGTCAATT 58.671 33.333 0.00 0.00 0.00 2.32
3094 3665 8.738645 ATCTTTATCCAACTACCAGTCAATTC 57.261 34.615 0.00 0.00 0.00 2.17
3095 3666 7.685481 TCTTTATCCAACTACCAGTCAATTCA 58.315 34.615 0.00 0.00 0.00 2.57
3096 3667 7.606456 TCTTTATCCAACTACCAGTCAATTCAC 59.394 37.037 0.00 0.00 0.00 3.18
3097 3668 4.015872 TCCAACTACCAGTCAATTCACC 57.984 45.455 0.00 0.00 0.00 4.02
3098 3669 3.650942 TCCAACTACCAGTCAATTCACCT 59.349 43.478 0.00 0.00 0.00 4.00
3099 3670 4.841813 TCCAACTACCAGTCAATTCACCTA 59.158 41.667 0.00 0.00 0.00 3.08
3100 3671 5.046591 TCCAACTACCAGTCAATTCACCTAG 60.047 44.000 0.00 0.00 0.00 3.02
3101 3672 5.046591 CCAACTACCAGTCAATTCACCTAGA 60.047 44.000 0.00 0.00 0.00 2.43
3102 3673 6.464222 CAACTACCAGTCAATTCACCTAGAA 58.536 40.000 0.00 0.00 41.28 2.10
3104 3675 6.879400 ACTACCAGTCAATTCACCTAGAATC 58.121 40.000 0.00 0.00 46.09 2.52
3105 3676 5.104259 ACCAGTCAATTCACCTAGAATCC 57.896 43.478 0.00 0.00 46.09 3.01
3106 3677 4.785376 ACCAGTCAATTCACCTAGAATCCT 59.215 41.667 0.00 0.00 46.09 3.24
3107 3678 5.964477 ACCAGTCAATTCACCTAGAATCCTA 59.036 40.000 0.00 0.00 46.09 2.94
3108 3679 6.098982 ACCAGTCAATTCACCTAGAATCCTAG 59.901 42.308 0.00 0.00 46.09 3.02
3109 3680 6.325028 CCAGTCAATTCACCTAGAATCCTAGA 59.675 42.308 0.00 0.00 46.09 2.43
3110 3681 7.016072 CCAGTCAATTCACCTAGAATCCTAGAT 59.984 40.741 0.00 0.00 46.09 1.98
3111 3682 9.083422 CAGTCAATTCACCTAGAATCCTAGATA 57.917 37.037 0.00 0.00 46.09 1.98
3112 3683 9.661954 AGTCAATTCACCTAGAATCCTAGATAA 57.338 33.333 0.00 0.00 46.09 1.75
3295 3866 4.334203 GTGAGTGATGTGTGTGTTTGGTTA 59.666 41.667 0.00 0.00 0.00 2.85
3327 3898 1.303282 GAAAGTCCCGGCCCAATCT 59.697 57.895 0.00 0.00 0.00 2.40
3385 3956 1.270358 ACTCCTCTGAAGCCGTTGAAC 60.270 52.381 0.00 0.00 0.00 3.18
3414 3985 4.144297 CACTTCAAAGTTCAGGGGATTGA 58.856 43.478 0.00 0.00 37.08 2.57
3478 4049 4.164843 AGTTTCACTAGGCTTTGTTCCA 57.835 40.909 0.00 0.00 0.00 3.53
3632 4213 4.760204 AGCCCATTGAACAAACAGTACTAC 59.240 41.667 0.00 0.00 0.00 2.73
3663 4244 7.684670 TGCTTTGTCATATAAAGAACATCGTC 58.315 34.615 0.00 0.00 37.33 4.20
3664 4245 7.333174 TGCTTTGTCATATAAAGAACATCGTCA 59.667 33.333 0.00 0.00 37.33 4.35
3682 4263 9.431887 ACATCGTCATAAAACTTACTATTGTGT 57.568 29.630 0.00 0.00 0.00 3.72
3706 4287 5.109210 TGCTCTATTGTACAAGGAACATCG 58.891 41.667 14.65 4.37 0.00 3.84
3737 4318 0.953960 CTACGGCGGAAACTTTGGCT 60.954 55.000 13.24 0.00 0.00 4.75
3780 4361 0.176449 GCAAAGGATGGGATGCAACC 59.824 55.000 4.00 4.00 38.63 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.674895 GATCGAGCTGCCACCAACTT 60.675 55.000 0.00 0.00 0.00 2.66
1 2 1.078848 GATCGAGCTGCCACCAACT 60.079 57.895 0.00 0.00 0.00 3.16
2 3 0.175760 TAGATCGAGCTGCCACCAAC 59.824 55.000 14.67 0.00 0.00 3.77
3 4 0.461548 CTAGATCGAGCTGCCACCAA 59.538 55.000 14.67 0.00 0.00 3.67
4 5 1.395045 CCTAGATCGAGCTGCCACCA 61.395 60.000 14.67 0.00 0.00 4.17
5 6 1.365633 CCTAGATCGAGCTGCCACC 59.634 63.158 14.67 0.00 0.00 4.61
6 7 1.365633 CCCTAGATCGAGCTGCCAC 59.634 63.158 14.67 0.00 0.00 5.01
7 8 1.075970 ACCCTAGATCGAGCTGCCA 60.076 57.895 14.67 0.00 0.00 4.92
8 9 1.663173 GACCCTAGATCGAGCTGCC 59.337 63.158 14.67 0.00 0.00 4.85
9 10 1.663173 GGACCCTAGATCGAGCTGC 59.337 63.158 14.67 0.00 0.00 5.25
10 11 2.346597 GGGACCCTAGATCGAGCTG 58.653 63.158 14.67 3.24 0.00 4.24
11 12 4.934316 GGGACCCTAGATCGAGCT 57.066 61.111 8.83 8.83 0.00 4.09
44 45 4.827087 AGCATGAGGTGGAGCGCG 62.827 66.667 0.00 0.00 0.00 6.86
45 46 2.437359 AAGCATGAGGTGGAGCGC 60.437 61.111 0.00 0.00 0.00 5.92
46 47 1.078918 TCAAGCATGAGGTGGAGCG 60.079 57.895 0.00 0.00 0.00 5.03
55 56 4.574674 AATACAAGACCCTCAAGCATGA 57.425 40.909 0.00 0.00 0.00 3.07
56 57 5.404946 CAAAATACAAGACCCTCAAGCATG 58.595 41.667 0.00 0.00 0.00 4.06
57 58 4.463891 CCAAAATACAAGACCCTCAAGCAT 59.536 41.667 0.00 0.00 0.00 3.79
58 59 3.826157 CCAAAATACAAGACCCTCAAGCA 59.174 43.478 0.00 0.00 0.00 3.91
59 60 3.367395 GCCAAAATACAAGACCCTCAAGC 60.367 47.826 0.00 0.00 0.00 4.01
60 61 3.826157 TGCCAAAATACAAGACCCTCAAG 59.174 43.478 0.00 0.00 0.00 3.02
61 62 3.572255 GTGCCAAAATACAAGACCCTCAA 59.428 43.478 0.00 0.00 0.00 3.02
62 63 3.153919 GTGCCAAAATACAAGACCCTCA 58.846 45.455 0.00 0.00 0.00 3.86
63 64 3.153919 TGTGCCAAAATACAAGACCCTC 58.846 45.455 0.00 0.00 0.00 4.30
64 65 3.237268 TGTGCCAAAATACAAGACCCT 57.763 42.857 0.00 0.00 0.00 4.34
65 66 5.127031 ACATATGTGCCAAAATACAAGACCC 59.873 40.000 7.78 0.00 0.00 4.46
66 67 6.207691 ACATATGTGCCAAAATACAAGACC 57.792 37.500 7.78 0.00 0.00 3.85
67 68 8.434661 CAAAACATATGTGCCAAAATACAAGAC 58.565 33.333 9.63 0.00 0.00 3.01
68 69 7.117523 GCAAAACATATGTGCCAAAATACAAGA 59.882 33.333 9.63 0.00 31.94 3.02
69 70 7.095313 TGCAAAACATATGTGCCAAAATACAAG 60.095 33.333 9.63 0.00 37.48 3.16
70 71 6.707608 TGCAAAACATATGTGCCAAAATACAA 59.292 30.769 9.63 0.00 37.48 2.41
71 72 6.226052 TGCAAAACATATGTGCCAAAATACA 58.774 32.000 9.63 0.00 37.48 2.29
72 73 6.718454 TGCAAAACATATGTGCCAAAATAC 57.282 33.333 9.63 0.00 37.48 1.89
73 74 7.918536 AATGCAAAACATATGTGCCAAAATA 57.081 28.000 9.63 0.00 38.34 1.40
74 75 6.821031 AATGCAAAACATATGTGCCAAAAT 57.179 29.167 9.63 0.00 38.34 1.82
75 76 6.485984 AGAAATGCAAAACATATGTGCCAAAA 59.514 30.769 9.63 0.00 38.34 2.44
76 77 5.996513 AGAAATGCAAAACATATGTGCCAAA 59.003 32.000 9.63 0.00 38.34 3.28
77 78 5.549347 AGAAATGCAAAACATATGTGCCAA 58.451 33.333 9.63 0.00 38.34 4.52
78 79 5.149973 AGAAATGCAAAACATATGTGCCA 57.850 34.783 9.63 4.92 38.34 4.92
79 80 6.484818 AAAGAAATGCAAAACATATGTGCC 57.515 33.333 9.63 0.00 38.34 5.01
80 81 6.733280 CGAAAAGAAATGCAAAACATATGTGC 59.267 34.615 9.63 9.43 38.34 4.57
81 82 7.095691 ACCGAAAAGAAATGCAAAACATATGTG 60.096 33.333 9.63 0.00 38.34 3.21
82 83 6.928492 ACCGAAAAGAAATGCAAAACATATGT 59.072 30.769 1.41 1.41 38.34 2.29
83 84 7.350110 ACCGAAAAGAAATGCAAAACATATG 57.650 32.000 0.00 0.00 38.34 1.78
84 85 9.651913 ATTACCGAAAAGAAATGCAAAACATAT 57.348 25.926 0.00 0.00 38.34 1.78
85 86 9.482627 AATTACCGAAAAGAAATGCAAAACATA 57.517 25.926 0.00 0.00 38.34 2.29
86 87 7.961325 ATTACCGAAAAGAAATGCAAAACAT 57.039 28.000 0.00 0.00 42.30 2.71
87 88 7.778470 AATTACCGAAAAGAAATGCAAAACA 57.222 28.000 0.00 0.00 0.00 2.83
90 91 9.921637 AGATAAATTACCGAAAAGAAATGCAAA 57.078 25.926 0.00 0.00 0.00 3.68
91 92 9.352784 CAGATAAATTACCGAAAAGAAATGCAA 57.647 29.630 0.00 0.00 0.00 4.08
92 93 8.519526 ACAGATAAATTACCGAAAAGAAATGCA 58.480 29.630 0.00 0.00 0.00 3.96
93 94 8.798153 CACAGATAAATTACCGAAAAGAAATGC 58.202 33.333 0.00 0.00 0.00 3.56
94 95 9.840427 ACACAGATAAATTACCGAAAAGAAATG 57.160 29.630 0.00 0.00 0.00 2.32
99 100 9.632969 CGAATACACAGATAAATTACCGAAAAG 57.367 33.333 0.00 0.00 0.00 2.27
100 101 9.153721 ACGAATACACAGATAAATTACCGAAAA 57.846 29.630 0.00 0.00 0.00 2.29
101 102 8.706492 ACGAATACACAGATAAATTACCGAAA 57.294 30.769 0.00 0.00 0.00 3.46
102 103 8.706492 AACGAATACACAGATAAATTACCGAA 57.294 30.769 0.00 0.00 0.00 4.30
103 104 8.706492 AAACGAATACACAGATAAATTACCGA 57.294 30.769 0.00 0.00 0.00 4.69
104 105 8.814235 AGAAACGAATACACAGATAAATTACCG 58.186 33.333 0.00 0.00 0.00 4.02
105 106 9.916397 CAGAAACGAATACACAGATAAATTACC 57.084 33.333 0.00 0.00 0.00 2.85
106 107 9.916397 CCAGAAACGAATACACAGATAAATTAC 57.084 33.333 0.00 0.00 0.00 1.89
107 108 9.661563 ACCAGAAACGAATACACAGATAAATTA 57.338 29.630 0.00 0.00 0.00 1.40
108 109 8.561738 ACCAGAAACGAATACACAGATAAATT 57.438 30.769 0.00 0.00 0.00 1.82
109 110 9.661563 TTACCAGAAACGAATACACAGATAAAT 57.338 29.630 0.00 0.00 0.00 1.40
110 111 9.491675 TTTACCAGAAACGAATACACAGATAAA 57.508 29.630 0.00 0.00 0.00 1.40
111 112 9.491675 TTTTACCAGAAACGAATACACAGATAA 57.508 29.630 0.00 0.00 0.00 1.75
112 113 9.491675 TTTTTACCAGAAACGAATACACAGATA 57.508 29.630 0.00 0.00 0.00 1.98
113 114 7.972832 TTTTACCAGAAACGAATACACAGAT 57.027 32.000 0.00 0.00 0.00 2.90
114 115 7.789273 TTTTTACCAGAAACGAATACACAGA 57.211 32.000 0.00 0.00 0.00 3.41
141 142 9.955102 AGATGTGTGCTATCATATTTATCACAT 57.045 29.630 0.00 0.00 43.45 3.21
142 143 9.211485 CAGATGTGTGCTATCATATTTATCACA 57.789 33.333 0.00 0.00 37.61 3.58
143 144 9.212641 ACAGATGTGTGCTATCATATTTATCAC 57.787 33.333 0.00 0.00 34.75 3.06
144 145 9.428097 GACAGATGTGTGCTATCATATTTATCA 57.572 33.333 0.00 0.00 36.88 2.15
145 146 9.650539 AGACAGATGTGTGCTATCATATTTATC 57.349 33.333 0.00 0.00 36.88 1.75
146 147 9.650539 GAGACAGATGTGTGCTATCATATTTAT 57.349 33.333 0.00 0.00 36.88 1.40
147 148 8.090831 GGAGACAGATGTGTGCTATCATATTTA 58.909 37.037 0.00 0.00 36.88 1.40
148 149 6.933521 GGAGACAGATGTGTGCTATCATATTT 59.066 38.462 0.00 0.00 36.88 1.40
149 150 6.462500 GGAGACAGATGTGTGCTATCATATT 58.538 40.000 0.00 0.00 36.88 1.28
150 151 5.336293 CGGAGACAGATGTGTGCTATCATAT 60.336 44.000 0.00 0.00 36.88 1.78
151 152 4.022849 CGGAGACAGATGTGTGCTATCATA 60.023 45.833 0.00 0.00 36.88 2.15
152 153 3.243670 CGGAGACAGATGTGTGCTATCAT 60.244 47.826 0.00 0.00 36.88 2.45
153 154 2.099756 CGGAGACAGATGTGTGCTATCA 59.900 50.000 0.00 0.00 36.88 2.15
154 155 2.736978 CGGAGACAGATGTGTGCTATC 58.263 52.381 0.00 0.00 36.88 2.08
155 156 1.202463 GCGGAGACAGATGTGTGCTAT 60.202 52.381 0.00 0.00 36.88 2.97
156 157 0.173481 GCGGAGACAGATGTGTGCTA 59.827 55.000 0.00 0.00 36.88 3.49
157 158 1.079543 GCGGAGACAGATGTGTGCT 60.080 57.895 0.00 0.00 36.88 4.40
158 159 1.079543 AGCGGAGACAGATGTGTGC 60.080 57.895 0.00 0.00 36.88 4.57
159 160 0.244721 TGAGCGGAGACAGATGTGTG 59.755 55.000 0.00 0.00 36.88 3.82
160 161 0.529833 CTGAGCGGAGACAGATGTGT 59.470 55.000 0.00 0.00 40.71 3.72
161 162 0.805322 GCTGAGCGGAGACAGATGTG 60.805 60.000 0.00 0.00 36.06 3.21
162 163 0.969917 AGCTGAGCGGAGACAGATGT 60.970 55.000 0.00 0.00 36.06 3.06
163 164 1.001487 CTAGCTGAGCGGAGACAGATG 60.001 57.143 0.00 0.00 36.06 2.90
164 165 1.317613 CTAGCTGAGCGGAGACAGAT 58.682 55.000 0.00 0.00 36.06 2.90
165 166 1.380403 GCTAGCTGAGCGGAGACAGA 61.380 60.000 7.70 0.00 42.62 3.41
166 167 1.065600 GCTAGCTGAGCGGAGACAG 59.934 63.158 7.70 0.00 42.62 3.51
167 168 3.201494 GCTAGCTGAGCGGAGACA 58.799 61.111 7.70 0.00 42.62 3.41
193 194 9.403583 AGTAAACTGTTGTTCCATCTAAGAAAA 57.596 29.630 0.00 0.00 34.96 2.29
194 195 8.974060 AGTAAACTGTTGTTCCATCTAAGAAA 57.026 30.769 0.00 0.00 34.96 2.52
196 197 9.871238 GATAGTAAACTGTTGTTCCATCTAAGA 57.129 33.333 0.00 0.00 34.96 2.10
197 198 9.653287 TGATAGTAAACTGTTGTTCCATCTAAG 57.347 33.333 0.00 0.00 34.96 2.18
199 200 9.817809 GATGATAGTAAACTGTTGTTCCATCTA 57.182 33.333 0.00 0.00 34.96 1.98
200 201 8.543774 AGATGATAGTAAACTGTTGTTCCATCT 58.456 33.333 12.99 12.99 34.96 2.90
201 202 8.723942 AGATGATAGTAAACTGTTGTTCCATC 57.276 34.615 0.00 3.82 34.96 3.51
202 203 9.601217 GTAGATGATAGTAAACTGTTGTTCCAT 57.399 33.333 0.00 0.00 34.96 3.41
203 204 8.812972 AGTAGATGATAGTAAACTGTTGTTCCA 58.187 33.333 0.00 0.00 34.96 3.53
204 205 9.303537 GAGTAGATGATAGTAAACTGTTGTTCC 57.696 37.037 0.00 0.00 34.96 3.62
205 206 9.303537 GGAGTAGATGATAGTAAACTGTTGTTC 57.696 37.037 0.00 0.00 34.96 3.18
206 207 9.036980 AGGAGTAGATGATAGTAAACTGTTGTT 57.963 33.333 0.00 0.00 38.16 2.83
207 208 8.596781 AGGAGTAGATGATAGTAAACTGTTGT 57.403 34.615 0.00 0.00 0.00 3.32
208 209 9.522804 GAAGGAGTAGATGATAGTAAACTGTTG 57.477 37.037 0.00 0.00 0.00 3.33
209 210 8.697292 GGAAGGAGTAGATGATAGTAAACTGTT 58.303 37.037 0.00 0.00 0.00 3.16
210 211 7.839705 TGGAAGGAGTAGATGATAGTAAACTGT 59.160 37.037 0.00 0.00 0.00 3.55
211 212 8.239038 TGGAAGGAGTAGATGATAGTAAACTG 57.761 38.462 0.00 0.00 0.00 3.16
212 213 9.084533 GATGGAAGGAGTAGATGATAGTAAACT 57.915 37.037 0.00 0.00 0.00 2.66
213 214 8.308207 GGATGGAAGGAGTAGATGATAGTAAAC 58.692 40.741 0.00 0.00 0.00 2.01
214 215 8.010697 TGGATGGAAGGAGTAGATGATAGTAAA 58.989 37.037 0.00 0.00 0.00 2.01
215 216 7.535738 TGGATGGAAGGAGTAGATGATAGTAA 58.464 38.462 0.00 0.00 0.00 2.24
216 217 7.018650 TCTGGATGGAAGGAGTAGATGATAGTA 59.981 40.741 0.00 0.00 0.00 1.82
217 218 5.970289 TGGATGGAAGGAGTAGATGATAGT 58.030 41.667 0.00 0.00 0.00 2.12
218 219 6.252233 TCTGGATGGAAGGAGTAGATGATAG 58.748 44.000 0.00 0.00 0.00 2.08
219 220 6.219537 TCTGGATGGAAGGAGTAGATGATA 57.780 41.667 0.00 0.00 0.00 2.15
220 221 5.085275 TCTGGATGGAAGGAGTAGATGAT 57.915 43.478 0.00 0.00 0.00 2.45
221 222 4.542906 TCTGGATGGAAGGAGTAGATGA 57.457 45.455 0.00 0.00 0.00 2.92
222 223 5.620738 TTTCTGGATGGAAGGAGTAGATG 57.379 43.478 0.00 0.00 0.00 2.90
223 224 7.079048 AGTATTTCTGGATGGAAGGAGTAGAT 58.921 38.462 0.00 0.00 0.00 1.98
224 225 6.444704 AGTATTTCTGGATGGAAGGAGTAGA 58.555 40.000 0.00 0.00 0.00 2.59
225 226 6.739331 AGTATTTCTGGATGGAAGGAGTAG 57.261 41.667 0.00 0.00 0.00 2.57
226 227 8.798975 ATAAGTATTTCTGGATGGAAGGAGTA 57.201 34.615 0.00 0.00 0.00 2.59
227 228 7.348274 TGATAAGTATTTCTGGATGGAAGGAGT 59.652 37.037 0.00 0.00 0.00 3.85
228 229 7.739825 TGATAAGTATTTCTGGATGGAAGGAG 58.260 38.462 0.00 0.00 0.00 3.69
229 230 7.690454 TGATAAGTATTTCTGGATGGAAGGA 57.310 36.000 0.00 0.00 0.00 3.36
230 231 8.159447 TGATGATAAGTATTTCTGGATGGAAGG 58.841 37.037 0.00 0.00 0.00 3.46
231 232 9.565090 TTGATGATAAGTATTTCTGGATGGAAG 57.435 33.333 0.00 0.00 0.00 3.46
232 233 9.919416 TTTGATGATAAGTATTTCTGGATGGAA 57.081 29.630 0.00 0.00 0.00 3.53
233 234 9.919416 TTTTGATGATAAGTATTTCTGGATGGA 57.081 29.630 0.00 0.00 0.00 3.41
250 251 8.995577 ACATCCCCTTTTATTCATTTTGATGAT 58.004 29.630 0.00 0.00 32.39 2.45
251 252 8.378115 ACATCCCCTTTTATTCATTTTGATGA 57.622 30.769 0.00 0.00 32.39 2.92
254 255 9.713684 AGATACATCCCCTTTTATTCATTTTGA 57.286 29.630 0.00 0.00 0.00 2.69
260 261 9.170890 ACATCTAGATACATCCCCTTTTATTCA 57.829 33.333 4.54 0.00 0.00 2.57
268 269 9.845214 ACTAAAATACATCTAGATACATCCCCT 57.155 33.333 4.54 0.00 0.00 4.79
290 291 9.886132 GACAAAAAGGGATGTATCTAGAACTAA 57.114 33.333 0.00 0.00 0.00 2.24
291 292 8.483758 GGACAAAAAGGGATGTATCTAGAACTA 58.516 37.037 0.00 0.00 0.00 2.24
292 293 7.037586 TGGACAAAAAGGGATGTATCTAGAACT 60.038 37.037 0.00 0.00 0.00 3.01
293 294 7.110155 TGGACAAAAAGGGATGTATCTAGAAC 58.890 38.462 0.00 0.00 0.00 3.01
294 295 7.265599 TGGACAAAAAGGGATGTATCTAGAA 57.734 36.000 0.00 0.00 0.00 2.10
295 296 6.884472 TGGACAAAAAGGGATGTATCTAGA 57.116 37.500 0.00 0.00 0.00 2.43
296 297 8.525290 AAATGGACAAAAAGGGATGTATCTAG 57.475 34.615 0.00 0.00 0.00 2.43
297 298 8.748412 CAAAATGGACAAAAAGGGATGTATCTA 58.252 33.333 0.00 0.00 0.00 1.98
298 299 7.454380 TCAAAATGGACAAAAAGGGATGTATCT 59.546 33.333 0.00 0.00 0.00 1.98
299 300 7.610865 TCAAAATGGACAAAAAGGGATGTATC 58.389 34.615 0.00 0.00 0.00 2.24
300 301 7.552050 TCAAAATGGACAAAAAGGGATGTAT 57.448 32.000 0.00 0.00 0.00 2.29
301 302 6.985653 TCAAAATGGACAAAAAGGGATGTA 57.014 33.333 0.00 0.00 0.00 2.29
302 303 5.885449 TCAAAATGGACAAAAAGGGATGT 57.115 34.783 0.00 0.00 0.00 3.06
303 304 6.730960 CATCAAAATGGACAAAAAGGGATG 57.269 37.500 0.00 0.00 0.00 3.51
317 318 7.401080 GTCCGAAAATATTTGCCATCAAAATG 58.599 34.615 0.39 0.00 44.44 2.32
318 319 6.255453 CGTCCGAAAATATTTGCCATCAAAAT 59.745 34.615 0.39 0.00 44.44 1.82
319 320 5.574830 CGTCCGAAAATATTTGCCATCAAAA 59.425 36.000 0.39 0.00 44.44 2.44
320 321 5.098893 CGTCCGAAAATATTTGCCATCAAA 58.901 37.500 0.39 0.00 45.24 2.69
321 322 4.396478 TCGTCCGAAAATATTTGCCATCAA 59.604 37.500 0.39 0.00 0.00 2.57
322 323 3.942115 TCGTCCGAAAATATTTGCCATCA 59.058 39.130 0.39 0.00 0.00 3.07
323 324 4.545823 TCGTCCGAAAATATTTGCCATC 57.454 40.909 0.39 0.00 0.00 3.51
324 325 4.202010 CCTTCGTCCGAAAATATTTGCCAT 60.202 41.667 0.39 0.00 33.34 4.40
325 326 3.127895 CCTTCGTCCGAAAATATTTGCCA 59.872 43.478 0.39 0.00 33.34 4.92
326 327 3.488553 CCCTTCGTCCGAAAATATTTGCC 60.489 47.826 0.39 0.00 33.34 4.52
327 328 3.375922 TCCCTTCGTCCGAAAATATTTGC 59.624 43.478 0.39 0.00 33.34 3.68
328 329 4.634443 ACTCCCTTCGTCCGAAAATATTTG 59.366 41.667 0.39 0.00 33.34 2.32
329 330 4.840271 ACTCCCTTCGTCCGAAAATATTT 58.160 39.130 3.52 0.00 33.34 1.40
330 331 4.482952 ACTCCCTTCGTCCGAAAATATT 57.517 40.909 3.52 0.00 33.34 1.28
331 332 5.803237 ATACTCCCTTCGTCCGAAAATAT 57.197 39.130 3.52 0.00 33.34 1.28
332 333 6.906157 ATATACTCCCTTCGTCCGAAAATA 57.094 37.500 3.52 0.00 33.34 1.40
333 334 5.803237 ATATACTCCCTTCGTCCGAAAAT 57.197 39.130 3.52 0.00 33.34 1.82
334 335 6.507023 GTTATATACTCCCTTCGTCCGAAAA 58.493 40.000 3.52 0.00 33.34 2.29
335 336 5.277974 CGTTATATACTCCCTTCGTCCGAAA 60.278 44.000 3.52 0.00 33.34 3.46
336 337 4.214119 CGTTATATACTCCCTTCGTCCGAA 59.786 45.833 1.81 1.81 0.00 4.30
337 338 3.748048 CGTTATATACTCCCTTCGTCCGA 59.252 47.826 0.00 0.00 0.00 4.55
338 339 3.499918 ACGTTATATACTCCCTTCGTCCG 59.500 47.826 0.00 0.00 0.00 4.79
339 340 5.444663 AACGTTATATACTCCCTTCGTCC 57.555 43.478 0.00 0.00 0.00 4.79
340 341 7.915397 TGTAAAACGTTATATACTCCCTTCGTC 59.085 37.037 0.00 0.00 0.00 4.20
341 342 7.771183 TGTAAAACGTTATATACTCCCTTCGT 58.229 34.615 0.00 0.00 0.00 3.85
342 343 8.807667 ATGTAAAACGTTATATACTCCCTTCG 57.192 34.615 0.00 0.00 0.00 3.79
405 406 8.905850 TGAATCAGATGTATGTATGCATGTTTT 58.094 29.630 10.16 0.00 36.58 2.43
406 407 8.454570 TGAATCAGATGTATGTATGCATGTTT 57.545 30.769 10.16 0.00 36.58 2.83
407 408 7.935210 TCTGAATCAGATGTATGTATGCATGTT 59.065 33.333 9.18 0.00 35.39 2.71
408 409 7.447594 TCTGAATCAGATGTATGTATGCATGT 58.552 34.615 9.18 0.00 35.39 3.21
409 410 7.817962 TCTCTGAATCAGATGTATGTATGCATG 59.182 37.037 13.93 0.00 39.92 4.06
410 411 7.904205 TCTCTGAATCAGATGTATGTATGCAT 58.096 34.615 13.93 3.79 39.92 3.96
411 412 7.294017 TCTCTGAATCAGATGTATGTATGCA 57.706 36.000 13.93 0.00 39.92 3.96
412 413 8.599055 TTTCTCTGAATCAGATGTATGTATGC 57.401 34.615 13.93 0.00 39.92 3.14
413 414 9.761504 ACTTTCTCTGAATCAGATGTATGTATG 57.238 33.333 13.93 0.00 39.92 2.39
420 421 9.342308 TGTTTTAACTTTCTCTGAATCAGATGT 57.658 29.630 13.93 7.77 39.92 3.06
426 427 9.959775 CGAGTATGTTTTAACTTTCTCTGAATC 57.040 33.333 10.91 0.00 32.23 2.52
427 428 8.443937 GCGAGTATGTTTTAACTTTCTCTGAAT 58.556 33.333 10.91 0.00 32.23 2.57
428 429 7.656137 AGCGAGTATGTTTTAACTTTCTCTGAA 59.344 33.333 10.91 0.00 32.23 3.02
429 430 7.152645 AGCGAGTATGTTTTAACTTTCTCTGA 58.847 34.615 10.91 0.00 32.23 3.27
430 431 7.352719 AGCGAGTATGTTTTAACTTTCTCTG 57.647 36.000 10.91 7.46 32.23 3.35
431 432 6.590677 GGAGCGAGTATGTTTTAACTTTCTCT 59.409 38.462 10.91 0.00 32.23 3.10
432 433 6.453922 CGGAGCGAGTATGTTTTAACTTTCTC 60.454 42.308 0.00 5.58 31.57 2.87
433 434 5.347907 CGGAGCGAGTATGTTTTAACTTTCT 59.652 40.000 0.00 0.00 0.00 2.52
434 435 5.119743 ACGGAGCGAGTATGTTTTAACTTTC 59.880 40.000 0.00 0.00 0.00 2.62
435 436 4.992951 ACGGAGCGAGTATGTTTTAACTTT 59.007 37.500 0.00 0.00 0.00 2.66
436 437 4.563061 ACGGAGCGAGTATGTTTTAACTT 58.437 39.130 0.00 0.00 0.00 2.66
437 438 4.171754 GACGGAGCGAGTATGTTTTAACT 58.828 43.478 0.00 0.00 0.00 2.24
438 439 3.305361 GGACGGAGCGAGTATGTTTTAAC 59.695 47.826 0.00 0.00 0.00 2.01
439 440 3.514645 GGACGGAGCGAGTATGTTTTAA 58.485 45.455 0.00 0.00 0.00 1.52
440 441 2.159198 GGGACGGAGCGAGTATGTTTTA 60.159 50.000 0.00 0.00 0.00 1.52
441 442 1.405121 GGGACGGAGCGAGTATGTTTT 60.405 52.381 0.00 0.00 0.00 2.43
442 443 0.175073 GGGACGGAGCGAGTATGTTT 59.825 55.000 0.00 0.00 0.00 2.83
443 444 0.968901 TGGGACGGAGCGAGTATGTT 60.969 55.000 0.00 0.00 0.00 2.71
444 445 0.968901 TTGGGACGGAGCGAGTATGT 60.969 55.000 0.00 0.00 0.00 2.29
445 446 0.174845 TTTGGGACGGAGCGAGTATG 59.825 55.000 0.00 0.00 0.00 2.39
446 447 0.899720 TTTTGGGACGGAGCGAGTAT 59.100 50.000 0.00 0.00 0.00 2.12
447 448 0.899720 ATTTTGGGACGGAGCGAGTA 59.100 50.000 0.00 0.00 0.00 2.59
448 449 0.899720 TATTTTGGGACGGAGCGAGT 59.100 50.000 0.00 0.00 0.00 4.18
449 450 1.933853 CTTATTTTGGGACGGAGCGAG 59.066 52.381 0.00 0.00 0.00 5.03
450 451 1.276989 ACTTATTTTGGGACGGAGCGA 59.723 47.619 0.00 0.00 0.00 4.93
451 452 1.396996 CACTTATTTTGGGACGGAGCG 59.603 52.381 0.00 0.00 0.00 5.03
452 453 2.418976 GACACTTATTTTGGGACGGAGC 59.581 50.000 0.00 0.00 0.00 4.70
453 454 3.939066 AGACACTTATTTTGGGACGGAG 58.061 45.455 0.00 0.00 0.00 4.63
454 455 4.069304 CAAGACACTTATTTTGGGACGGA 58.931 43.478 0.00 0.00 0.00 4.69
455 456 4.069304 TCAAGACACTTATTTTGGGACGG 58.931 43.478 0.00 0.00 0.00 4.79
456 457 4.083484 GGTCAAGACACTTATTTTGGGACG 60.083 45.833 2.29 0.00 0.00 4.79
457 458 5.070685 AGGTCAAGACACTTATTTTGGGAC 58.929 41.667 2.29 0.00 0.00 4.46
458 459 5.319043 AGGTCAAGACACTTATTTTGGGA 57.681 39.130 2.29 0.00 0.00 4.37
459 460 6.715264 ACTAAGGTCAAGACACTTATTTTGGG 59.285 38.462 2.29 0.00 0.00 4.12
460 461 7.745620 ACTAAGGTCAAGACACTTATTTTGG 57.254 36.000 2.29 0.05 0.00 3.28
461 462 9.268268 TGTACTAAGGTCAAGACACTTATTTTG 57.732 33.333 2.29 0.34 0.00 2.44
462 463 9.841295 TTGTACTAAGGTCAAGACACTTATTTT 57.159 29.630 2.29 0.15 0.00 1.82
463 464 9.841295 TTTGTACTAAGGTCAAGACACTTATTT 57.159 29.630 2.29 2.03 0.00 1.40
466 467 9.841295 AAATTTGTACTAAGGTCAAGACACTTA 57.159 29.630 2.29 6.73 0.00 2.24
467 468 8.747538 AAATTTGTACTAAGGTCAAGACACTT 57.252 30.769 2.29 5.99 0.00 3.16
490 491 9.496873 TCAACTTTGCACTAGCTTTAGTATAAA 57.503 29.630 0.00 0.00 42.74 1.40
491 492 9.151471 CTCAACTTTGCACTAGCTTTAGTATAA 57.849 33.333 0.00 0.00 42.74 0.98
492 493 8.528643 TCTCAACTTTGCACTAGCTTTAGTATA 58.471 33.333 0.00 0.00 42.74 1.47
493 494 7.332182 GTCTCAACTTTGCACTAGCTTTAGTAT 59.668 37.037 0.00 0.00 42.74 2.12
494 495 6.645415 GTCTCAACTTTGCACTAGCTTTAGTA 59.355 38.462 0.00 0.00 42.74 1.82
495 496 5.467063 GTCTCAACTTTGCACTAGCTTTAGT 59.533 40.000 0.00 0.00 42.74 2.24
496 497 5.466728 TGTCTCAACTTTGCACTAGCTTTAG 59.533 40.000 0.00 0.00 42.74 1.85
497 498 5.236478 GTGTCTCAACTTTGCACTAGCTTTA 59.764 40.000 0.00 0.00 42.74 1.85
498 499 4.035675 GTGTCTCAACTTTGCACTAGCTTT 59.964 41.667 0.00 0.00 42.74 3.51
499 500 3.561725 GTGTCTCAACTTTGCACTAGCTT 59.438 43.478 0.00 0.00 42.74 3.74
500 501 3.134458 GTGTCTCAACTTTGCACTAGCT 58.866 45.455 0.00 0.00 42.74 3.32
501 502 3.134458 AGTGTCTCAACTTTGCACTAGC 58.866 45.455 0.00 0.00 38.46 3.42
502 503 7.386299 AGAATAAGTGTCTCAACTTTGCACTAG 59.614 37.037 0.00 0.00 40.77 2.57
503 504 7.171508 CAGAATAAGTGTCTCAACTTTGCACTA 59.828 37.037 0.00 0.00 40.77 2.74
504 505 6.017605 CAGAATAAGTGTCTCAACTTTGCACT 60.018 38.462 0.00 0.00 40.77 4.40
505 506 6.138761 CAGAATAAGTGTCTCAACTTTGCAC 58.861 40.000 0.00 0.00 40.77 4.57
506 507 5.239306 CCAGAATAAGTGTCTCAACTTTGCA 59.761 40.000 0.00 0.00 40.77 4.08
507 508 5.335191 CCCAGAATAAGTGTCTCAACTTTGC 60.335 44.000 0.00 0.00 40.77 3.68
508 509 5.997746 TCCCAGAATAAGTGTCTCAACTTTG 59.002 40.000 0.00 0.00 40.77 2.77
509 510 5.998363 GTCCCAGAATAAGTGTCTCAACTTT 59.002 40.000 0.00 0.00 40.77 2.66
510 511 5.071788 TGTCCCAGAATAAGTGTCTCAACTT 59.928 40.000 0.00 0.00 42.89 2.66
511 512 4.593206 TGTCCCAGAATAAGTGTCTCAACT 59.407 41.667 0.00 0.00 0.00 3.16
512 513 4.894784 TGTCCCAGAATAAGTGTCTCAAC 58.105 43.478 0.00 0.00 0.00 3.18
513 514 4.838423 TCTGTCCCAGAATAAGTGTCTCAA 59.162 41.667 0.00 0.00 37.57 3.02
514 515 4.416516 TCTGTCCCAGAATAAGTGTCTCA 58.583 43.478 0.00 0.00 37.57 3.27
515 516 4.142049 CCTCTGTCCCAGAATAAGTGTCTC 60.142 50.000 0.00 0.00 40.18 3.36
516 517 3.772025 CCTCTGTCCCAGAATAAGTGTCT 59.228 47.826 0.00 0.00 40.18 3.41
517 518 3.118592 CCCTCTGTCCCAGAATAAGTGTC 60.119 52.174 0.00 0.00 40.18 3.67
518 519 2.840651 CCCTCTGTCCCAGAATAAGTGT 59.159 50.000 0.00 0.00 40.18 3.55
519 520 3.107601 TCCCTCTGTCCCAGAATAAGTG 58.892 50.000 0.00 0.00 40.18 3.16
520 521 3.246167 ACTCCCTCTGTCCCAGAATAAGT 60.246 47.826 0.00 0.00 40.18 2.24
521 522 3.379452 ACTCCCTCTGTCCCAGAATAAG 58.621 50.000 0.00 0.00 40.18 1.73
522 523 3.491766 ACTCCCTCTGTCCCAGAATAA 57.508 47.619 0.00 0.00 40.18 1.40
523 524 4.834406 ATACTCCCTCTGTCCCAGAATA 57.166 45.455 0.00 0.00 40.18 1.75
524 525 3.715648 ATACTCCCTCTGTCCCAGAAT 57.284 47.619 0.00 0.00 40.18 2.40
525 526 3.491766 AATACTCCCTCTGTCCCAGAA 57.508 47.619 0.00 0.00 40.18 3.02
526 527 4.834406 ATAATACTCCCTCTGTCCCAGA 57.166 45.455 0.00 0.00 38.25 3.86
527 528 7.560796 AATTATAATACTCCCTCTGTCCCAG 57.439 40.000 0.00 0.00 0.00 4.45
528 529 7.202186 CCAAATTATAATACTCCCTCTGTCCCA 60.202 40.741 0.00 0.00 0.00 4.37
529 530 7.017254 TCCAAATTATAATACTCCCTCTGTCCC 59.983 40.741 0.00 0.00 0.00 4.46
530 531 7.974504 TCCAAATTATAATACTCCCTCTGTCC 58.025 38.462 0.00 0.00 0.00 4.02
531 532 9.274206 GTTCCAAATTATAATACTCCCTCTGTC 57.726 37.037 0.00 0.00 0.00 3.51
532 533 8.778059 TGTTCCAAATTATAATACTCCCTCTGT 58.222 33.333 0.00 0.00 0.00 3.41
533 534 9.627123 TTGTTCCAAATTATAATACTCCCTCTG 57.373 33.333 0.00 0.00 0.00 3.35
562 563 2.824341 CCAAACGGACAGGTAGTACTCT 59.176 50.000 0.00 0.00 0.00 3.24
567 568 2.322658 TCTTCCAAACGGACAGGTAGT 58.677 47.619 0.00 0.00 30.04 2.73
571 572 5.183140 ACATATTTTCTTCCAAACGGACAGG 59.817 40.000 0.00 0.00 30.04 4.00
593 594 7.413219 CCGAAGAAACAACCGCTAATATTTACA 60.413 37.037 0.00 0.00 0.00 2.41
730 770 8.761575 ATGTCATTTCATCGTAAAAATTTGCT 57.238 26.923 0.00 0.00 0.00 3.91
740 780 3.935828 TCCGCAAATGTCATTTCATCGTA 59.064 39.130 7.87 0.00 0.00 3.43
761 801 1.376609 ATTTTCACGATGGCCGCCTC 61.377 55.000 11.61 4.95 43.32 4.70
763 803 0.108851 AAATTTTCACGATGGCCGCC 60.109 50.000 1.04 1.04 43.32 6.13
765 805 3.168193 GTGTAAATTTTCACGATGGCCG 58.832 45.455 11.52 0.00 45.44 6.13
773 813 5.513495 TGTTTCACTGCGTGTAAATTTTCAC 59.487 36.000 15.71 15.71 34.79 3.18
774 814 5.513495 GTGTTTCACTGCGTGTAAATTTTCA 59.487 36.000 0.00 0.00 34.79 2.69
775 815 5.513495 TGTGTTTCACTGCGTGTAAATTTTC 59.487 36.000 0.00 0.00 35.11 2.29
776 816 5.403246 TGTGTTTCACTGCGTGTAAATTTT 58.597 33.333 0.00 0.00 35.11 1.82
777 817 4.987832 TGTGTTTCACTGCGTGTAAATTT 58.012 34.783 8.22 0.00 35.11 1.82
778 818 4.624336 TGTGTTTCACTGCGTGTAAATT 57.376 36.364 8.22 0.00 35.11 1.82
779 819 4.624336 TTGTGTTTCACTGCGTGTAAAT 57.376 36.364 8.22 0.00 35.11 1.40
780 820 4.421033 TTTGTGTTTCACTGCGTGTAAA 57.579 36.364 8.22 5.76 35.11 2.01
781 821 4.095036 TGATTTGTGTTTCACTGCGTGTAA 59.905 37.500 8.22 3.38 35.11 2.41
782 822 3.623510 TGATTTGTGTTTCACTGCGTGTA 59.376 39.130 8.22 0.00 35.11 2.90
783 823 2.421775 TGATTTGTGTTTCACTGCGTGT 59.578 40.909 8.22 0.00 35.11 4.49
784 824 3.063670 TGATTTGTGTTTCACTGCGTG 57.936 42.857 2.79 2.79 35.11 5.34
785 825 3.773860 TTGATTTGTGTTTCACTGCGT 57.226 38.095 1.72 0.00 35.11 5.24
786 826 6.932901 AATATTGATTTGTGTTTCACTGCG 57.067 33.333 1.72 0.00 35.11 5.18
857 902 8.859090 CATCCACCCTTTGCTATAATAAATTCA 58.141 33.333 0.00 0.00 0.00 2.57
858 903 7.814587 GCATCCACCCTTTGCTATAATAAATTC 59.185 37.037 0.00 0.00 33.61 2.17
938 985 1.933853 CCTACATGGAACTTACGCTGC 59.066 52.381 0.00 0.00 38.35 5.25
980 1027 0.632835 TAAGTAGAAGGCGGGAGGGA 59.367 55.000 0.00 0.00 0.00 4.20
995 1042 4.931002 TCGCGTTGGCTAAAATAAGTAAGT 59.069 37.500 5.77 0.00 36.88 2.24
1025 1072 1.370657 GATCGCCTCGATGTCGTCC 60.371 63.158 6.44 0.00 47.00 4.79
1089 1137 1.464997 GATTCAGCGGCGGATTATTCC 59.535 52.381 9.78 0.00 38.81 3.01
1199 1247 0.983378 CCTCCCGGAACTCCTGGATT 60.983 60.000 0.73 0.00 46.32 3.01
1261 1309 7.344095 AGAAGAACCATTGGATTGATTGATC 57.656 36.000 10.37 0.00 0.00 2.92
1277 1325 2.047179 AGCGCGGGAAGAAGAACC 60.047 61.111 8.83 0.00 0.00 3.62
1278 1326 2.101233 GGAGCGCGGGAAGAAGAAC 61.101 63.158 8.83 0.00 0.00 3.01
1279 1327 2.227089 GAGGAGCGCGGGAAGAAGAA 62.227 60.000 8.83 0.00 0.00 2.52
1287 1336 4.292178 GATCAGGAGGAGCGCGGG 62.292 72.222 8.83 0.00 0.00 6.13
1291 1340 0.038709 GAATCGGATCAGGAGGAGCG 60.039 60.000 0.00 0.00 30.89 5.03
1445 1494 1.446907 CACCATGTCCTTGAGCTCAC 58.553 55.000 18.03 5.40 0.00 3.51
1713 1762 4.567159 GCGAACTCCTTGTAGTTAATCTGG 59.433 45.833 0.00 0.00 39.78 3.86
1766 1815 0.336048 ATTGGGTGGACATTGGAGGG 59.664 55.000 0.00 0.00 0.00 4.30
1805 1854 7.959658 AGAATGTAATGGAATGGAATGTTGA 57.040 32.000 0.00 0.00 0.00 3.18
1835 1884 7.613585 CAATCCTAGAGTGCTGATATGATCTT 58.386 38.462 0.00 0.00 0.00 2.40
1898 1947 6.640518 TGCGAAAATGATCTACTTAGAACCT 58.359 36.000 0.00 0.00 35.69 3.50
1961 2300 6.966534 ACTGGGAAATATCAAATCCATCAC 57.033 37.500 0.00 0.00 34.82 3.06
2059 2606 0.755079 CTCTCAAGGATCGCATGGGA 59.245 55.000 15.52 15.52 0.00 4.37
2089 2636 6.429692 TGTTGTTCCATTACTGGTTGATAGTG 59.570 38.462 0.00 0.00 43.61 2.74
2090 2637 6.539173 TGTTGTTCCATTACTGGTTGATAGT 58.461 36.000 0.00 0.00 43.61 2.12
2147 2694 8.266392 TGATGTTTTTGATGCTTTTGAACTTT 57.734 26.923 0.00 0.00 0.00 2.66
2171 2718 5.880054 ACTTGATAACCTTCGGTCAAATG 57.120 39.130 0.00 0.00 33.12 2.32
2224 2771 3.058777 CACCCAAAATTGCAAGCAATGTC 60.059 43.478 19.81 0.00 44.86 3.06
2231 2778 2.243602 AGCACACCCAAAATTGCAAG 57.756 45.000 4.94 0.00 37.44 4.01
2417 2965 6.345565 CCGTTAGACCGAGCTTATAAATTTCG 60.346 42.308 0.00 6.14 0.00 3.46
2425 2977 0.030369 CGCCGTTAGACCGAGCTTAT 59.970 55.000 0.00 0.00 0.00 1.73
2719 3271 4.079787 AGGCCAGAGCAATGAACCTATTTA 60.080 41.667 5.01 0.00 42.56 1.40
2749 3301 0.603569 AGCCTATGCCGGAGTAATCG 59.396 55.000 5.05 0.00 38.69 3.34
2779 3331 8.706322 ATCATTTTGTCTGGTAAACCTACTTT 57.294 30.769 0.02 0.00 36.82 2.66
2914 3485 3.556004 GGATGGTAGCTCTGGAATAGCAC 60.556 52.174 0.00 0.00 42.62 4.40
2919 3490 2.224719 GCATGGATGGTAGCTCTGGAAT 60.225 50.000 0.00 0.00 0.00 3.01
2923 3494 1.590932 GTGCATGGATGGTAGCTCTG 58.409 55.000 0.00 0.00 0.00 3.35
2968 3539 3.923461 TGTGCTTTTTCTTTGTTCAACGG 59.077 39.130 0.00 0.00 0.00 4.44
3045 3616 8.733092 ATCAACATCTATAAAGGATCCTCAGA 57.267 34.615 16.52 15.11 0.00 3.27
3070 3641 7.606456 GTGAATTGACTGGTAGTTGGATAAAGA 59.394 37.037 0.00 0.00 0.00 2.52
3075 3646 4.289672 AGGTGAATTGACTGGTAGTTGGAT 59.710 41.667 0.00 0.00 0.00 3.41
3078 3649 6.037786 TCTAGGTGAATTGACTGGTAGTTG 57.962 41.667 0.00 0.00 0.00 3.16
3120 3691 9.661954 TCTAGGATTCTAGGTGAATTGACTATT 57.338 33.333 8.25 0.00 44.70 1.73
3121 3692 9.836179 ATCTAGGATTCTAGGTGAATTGACTAT 57.164 33.333 8.25 0.00 44.70 2.12
3123 3694 9.661954 TTATCTAGGATTCTAGGTGAATTGACT 57.338 33.333 8.25 0.00 44.70 3.41
3167 3738 1.341531 GATGTAGGTGGGTCCATCTCG 59.658 57.143 5.98 0.00 38.50 4.04
3205 3776 6.332735 AGACCTCAACTTTAAAAGGAATGC 57.667 37.500 10.08 0.00 32.99 3.56
3385 3956 3.243068 CCTGAACTTTGAAGTGGGTTTCG 60.243 47.826 0.00 0.00 39.66 3.46
3414 3985 9.911788 AATTAGGTTGATCTCATACTTGTGAAT 57.088 29.630 0.00 0.00 0.00 2.57
3632 4213 6.426980 TCTTTATATGACAAAGCAGCACAG 57.573 37.500 0.00 0.00 33.82 3.66
3682 4263 5.580691 CGATGTTCCTTGTACAATAGAGCAA 59.419 40.000 21.11 10.74 0.00 3.91
3689 4270 7.660208 AGTTTTCTACGATGTTCCTTGTACAAT 59.340 33.333 9.13 0.00 0.00 2.71
3706 4287 4.096732 TCCGCCGTAGTAAGTTTTCTAC 57.903 45.455 7.45 7.45 34.84 2.59
3723 4304 0.519077 CTGAGAGCCAAAGTTTCCGC 59.481 55.000 0.00 0.00 0.00 5.54
3737 4318 0.537188 GGGCAAGACCGAATCTGAGA 59.463 55.000 0.00 0.00 37.88 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.