Multiple sequence alignment - TraesCS5D01G152200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G152200 chr5D 100.000 5184 0 0 1522 6705 241269401 241264218 0.000000e+00 9574.0
1 TraesCS5D01G152200 chr5D 100.000 1067 0 0 1 1067 241270922 241269856 0.000000e+00 1971.0
2 TraesCS5D01G152200 chr5D 89.189 111 11 1 5501 5610 475843414 475843304 3.260000e-28 137.0
3 TraesCS5D01G152200 chr5B 96.860 2420 48 12 3119 5523 262362984 262365390 0.000000e+00 4023.0
4 TraesCS5D01G152200 chr5B 94.643 1624 50 15 1522 3124 262359209 262360816 0.000000e+00 2483.0
5 TraesCS5D01G152200 chr5B 91.082 841 49 10 1 815 262357668 262358508 0.000000e+00 1114.0
6 TraesCS5D01G152200 chr5B 89.905 525 32 9 5575 6080 262365519 262366041 0.000000e+00 656.0
7 TraesCS5D01G152200 chr5B 93.333 195 12 1 873 1067 262358947 262359140 3.060000e-73 287.0
8 TraesCS5D01G152200 chr5B 88.889 144 13 2 6083 6223 262422193 262422336 2.490000e-39 174.0
9 TraesCS5D01G152200 chr5B 93.000 100 5 1 5500 5599 664669399 664669496 1.950000e-30 145.0
10 TraesCS5D01G152200 chr5A 94.709 2608 87 27 1538 4108 310982678 310980085 0.000000e+00 4004.0
11 TraesCS5D01G152200 chr5A 94.004 1351 53 8 4181 5516 310980065 310978728 0.000000e+00 2021.0
12 TraesCS5D01G152200 chr5A 88.969 1115 71 26 1 1067 310983869 310982759 0.000000e+00 1330.0
13 TraesCS5D01G152200 chr5A 90.491 652 37 14 5596 6229 310978731 310978087 0.000000e+00 837.0
14 TraesCS5D01G152200 chr5A 94.737 95 5 0 5512 5606 9508006 9508100 1.510000e-31 148.0
15 TraesCS5D01G152200 chr5A 90.826 109 9 1 5506 5613 680978171 680978063 1.950000e-30 145.0
16 TraesCS5D01G152200 chr5A 91.781 73 6 0 6633 6705 310978086 310978014 1.190000e-17 102.0
17 TraesCS5D01G152200 chr7A 89.851 335 31 3 4475 4807 94180376 94180709 1.730000e-115 427.0
18 TraesCS5D01G152200 chr7A 89.474 342 29 3 4475 4810 93921264 93921604 6.210000e-115 425.0
19 TraesCS5D01G152200 chr7A 88.462 338 33 3 4475 4807 94211584 94211920 2.910000e-108 403.0
20 TraesCS5D01G152200 chr7A 97.826 46 1 0 6127 6172 152549473 152549428 5.570000e-11 80.5
21 TraesCS5D01G152200 chr7A 88.889 63 7 0 6545 6607 49988275 49988213 2.000000e-10 78.7
22 TraesCS5D01G152200 chr4B 86.290 372 39 6 4475 4845 40556851 40557211 1.750000e-105 394.0
23 TraesCS5D01G152200 chr4B 84.153 183 22 4 4290 4465 40556621 40556803 3.220000e-38 171.0
24 TraesCS5D01G152200 chr1D 85.512 283 35 2 6230 6512 427426508 427426784 2.370000e-74 291.0
25 TraesCS5D01G152200 chr1D 78.998 419 53 16 6225 6610 345238553 345238969 3.100000e-63 254.0
26 TraesCS5D01G152200 chr1D 83.838 99 9 3 6438 6529 427426765 427426863 3.330000e-13 87.9
27 TraesCS5D01G152200 chr7D 90.698 215 19 1 4475 4688 566230583 566230797 1.100000e-72 285.0
28 TraesCS5D01G152200 chr7D 97.826 46 1 0 6127 6172 152134124 152134079 5.570000e-11 80.5
29 TraesCS5D01G152200 chr3A 84.615 273 35 6 6230 6498 662791212 662791481 1.430000e-66 265.0
30 TraesCS5D01G152200 chr3A 85.507 69 4 4 6133 6196 9747697 9747630 4.340000e-07 67.6
31 TraesCS5D01G152200 chr2D 98.864 88 1 0 5512 5599 588034111 588034198 2.500000e-34 158.0
32 TraesCS5D01G152200 chr6A 96.667 90 3 0 5513 5602 439517403 439517314 4.190000e-32 150.0
33 TraesCS5D01G152200 chr4A 95.745 94 3 1 5513 5606 411853683 411853775 4.190000e-32 150.0
34 TraesCS5D01G152200 chr1B 95.652 92 4 0 5515 5606 70315254 70315163 1.510000e-31 148.0
35 TraesCS5D01G152200 chr1B 81.287 171 26 3 6452 6616 571431153 571431323 4.220000e-27 134.0
36 TraesCS5D01G152200 chr2A 93.814 97 6 0 5515 5611 386732355 386732259 5.420000e-31 147.0
37 TraesCS5D01G152200 chrUn 83.333 162 19 4 6464 6619 97777728 97777569 7.010000e-30 143.0
38 TraesCS5D01G152200 chr7B 78.505 214 35 8 6406 6610 631059442 631059231 5.460000e-26 130.0
39 TraesCS5D01G152200 chr3B 82.576 132 19 2 6477 6604 507849634 507849765 5.500000e-21 113.0
40 TraesCS5D01G152200 chr3B 84.058 69 5 5 6133 6196 117300408 117300341 2.020000e-05 62.1
41 TraesCS5D01G152200 chr3D 77.005 187 34 3 6427 6604 277781088 277780902 1.540000e-16 99.0
42 TraesCS5D01G152200 chr3D 84.848 66 6 3 6117 6179 376923570 376923634 5.610000e-06 63.9
43 TraesCS5D01G152200 chr2B 82.418 91 14 2 6530 6619 416501655 416501566 2.000000e-10 78.7
44 TraesCS5D01G152200 chr2B 85.507 69 4 4 6133 6196 305325374 305325441 4.340000e-07 67.6
45 TraesCS5D01G152200 chr2B 85.507 69 4 4 6133 6196 305325771 305325838 4.340000e-07 67.6
46 TraesCS5D01G152200 chr6B 84.810 79 7 4 6535 6612 130298659 130298585 2.590000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G152200 chr5D 241264218 241270922 6704 True 5772.5 9574 100.0000 1 6705 2 chr5D.!!$R2 6704
1 TraesCS5D01G152200 chr5B 262357668 262366041 8373 False 1712.6 4023 93.1646 1 6080 5 chr5B.!!$F3 6079
2 TraesCS5D01G152200 chr5A 310978014 310983869 5855 True 1658.8 4004 91.9908 1 6705 5 chr5A.!!$R2 6704
3 TraesCS5D01G152200 chr4B 40556621 40557211 590 False 282.5 394 85.2215 4290 4845 2 chr4B.!!$F1 555

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
221 222 0.095935 CAATGAAGCAACGCTCTCGG 59.904 55.000 0.00 0.00 38.25 4.63 F
561 575 0.326927 TCGGTGTTCAGGGGAATTCC 59.673 55.000 16.74 16.74 35.05 3.01 F
1753 2186 0.034059 AGCCGGATGATTTCCTAGCG 59.966 55.000 5.05 0.00 43.01 4.26 F
2313 2747 1.202348 GTGGCTAATTTTCCGCAGCTT 59.798 47.619 0.00 0.00 34.41 3.74 F
2779 3227 3.879892 GGATTCAGGTGAGATTTGCCTAC 59.120 47.826 0.00 0.00 0.00 3.18 F
3620 6252 2.355197 TGTAATGGCCAGTCATTCACG 58.645 47.619 10.05 0.00 38.24 4.35 F
5505 8201 0.915364 AAGATGGAGGTCCCTGAAGC 59.085 55.000 0.00 0.00 35.38 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1745 2178 1.511305 CCTCGTGCTTCGCTAGGAA 59.489 57.895 0.0 0.00 36.16 3.36 R
1914 2347 3.664107 TGGACAAGACACATTACTGAGC 58.336 45.455 0.0 0.00 0.00 4.26 R
3113 3571 3.814842 CCCTGAAAAGAAAATTGCCAACC 59.185 43.478 0.0 0.00 0.00 3.77 R
3242 5873 4.335416 GAAGAACATCCACCAGAATCCAA 58.665 43.478 0.0 0.00 0.00 3.53 R
4591 7271 0.329596 GTCCCAGTTTGCTCCCTGAT 59.670 55.000 0.0 0.00 0.00 2.90 R
5614 8387 4.358851 TGGAAAACGATTTGTGAGCAAAG 58.641 39.130 0.0 0.00 46.30 2.77 R
6500 9292 0.033781 CCCAACCATTGCAACACAGG 59.966 55.000 0.0 4.29 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
173 174 9.269453 TCAGCTATGAAATTGATAGTTCAGATG 57.731 33.333 1.73 0.00 41.15 2.90
184 185 1.556911 AGTTCAGATGCTCCATTCGGT 59.443 47.619 0.00 0.00 0.00 4.69
221 222 0.095935 CAATGAAGCAACGCTCTCGG 59.904 55.000 0.00 0.00 38.25 4.63
240 241 7.129109 TCTCGGAATAAAGTTCATGTTTGAC 57.871 36.000 0.00 0.00 0.00 3.18
243 244 7.162761 TCGGAATAAAGTTCATGTTTGACCTA 58.837 34.615 0.00 0.00 0.00 3.08
282 283 5.631929 TGGCTATTTTATATACTGCGACACG 59.368 40.000 0.00 0.00 0.00 4.49
286 287 6.764877 ATTTTATATACTGCGACACGAAGG 57.235 37.500 4.20 0.00 36.73 3.46
297 298 2.545113 CGACACGAAGGAAGAAGTTGGA 60.545 50.000 0.00 0.00 0.00 3.53
356 357 1.811558 GCACGTGATCATATGGTGCCT 60.812 52.381 22.23 0.00 46.08 4.75
367 368 8.531982 TGATCATATGGTGCCTATTAGTCTAAC 58.468 37.037 2.13 0.00 0.00 2.34
375 388 6.183360 GGTGCCTATTAGTCTAACTCATGACA 60.183 42.308 0.00 0.00 35.81 3.58
377 390 7.764443 GTGCCTATTAGTCTAACTCATGACAAA 59.236 37.037 0.00 0.00 35.81 2.83
385 398 6.421202 AGTCTAACTCATGACAAAAGACGTTC 59.579 38.462 13.16 0.00 37.53 3.95
395 408 6.626302 TGACAAAAGACGTTCCAAGAAAAAT 58.374 32.000 0.00 0.00 0.00 1.82
436 450 4.646492 GGACCTTAACCCTCGTAGTCAATA 59.354 45.833 0.00 0.00 0.00 1.90
472 486 2.038269 GCAGGATGGCCGAAACGAA 61.038 57.895 0.00 0.00 39.96 3.85
548 562 4.760047 GCGGCCATGTCTCGGTGT 62.760 66.667 2.24 0.00 0.00 4.16
561 575 0.326927 TCGGTGTTCAGGGGAATTCC 59.673 55.000 16.74 16.74 35.05 3.01
580 594 3.972133 TCCTGTATCTGGTAAGGACGAA 58.028 45.455 0.00 0.00 33.85 3.85
760 787 2.442188 CCCGTGCTTCTTACGCGAC 61.442 63.158 15.93 0.00 43.44 5.19
799 831 4.070716 CAATTCTCAGTCAAGCAGGTCTT 58.929 43.478 0.00 0.00 34.78 3.01
815 847 1.074850 CTTCTCCTCCCCTCCTCCC 60.075 68.421 0.00 0.00 0.00 4.30
817 849 4.548513 CTCCTCCCCTCCTCCCCG 62.549 77.778 0.00 0.00 0.00 5.73
900 1312 1.135344 GTCCTCCTGTCGTCTGCTTAC 60.135 57.143 0.00 0.00 0.00 2.34
901 1313 1.178276 CCTCCTGTCGTCTGCTTACT 58.822 55.000 0.00 0.00 0.00 2.24
902 1314 1.135257 CCTCCTGTCGTCTGCTTACTG 60.135 57.143 0.00 0.00 0.00 2.74
910 1322 4.864806 TGTCGTCTGCTTACTGATTGAATC 59.135 41.667 0.00 0.00 0.00 2.52
912 1324 5.578727 GTCGTCTGCTTACTGATTGAATCTT 59.421 40.000 6.73 0.00 0.00 2.40
1014 1426 4.162690 ACGATGCCGAGCTTCCCC 62.163 66.667 0.00 0.00 39.50 4.81
1582 1994 2.681591 TCCCTGTCGGAGGATCGT 59.318 61.111 3.16 0.00 46.33 3.73
1673 2087 4.081087 TGCGGAGGATTTAGAGTTTTAGCT 60.081 41.667 0.00 0.00 0.00 3.32
1675 2089 5.661458 CGGAGGATTTAGAGTTTTAGCTCA 58.339 41.667 0.00 0.00 37.94 4.26
1688 2102 9.141400 AGAGTTTTAGCTCACTAATTTAACTCG 57.859 33.333 15.94 0.00 46.52 4.18
1696 2129 6.620733 GCTCACTAATTTAACTCGCAATGTGT 60.621 38.462 0.00 0.00 0.00 3.72
1714 2147 5.304686 TGTGTATATTTCAGGGGATGGTC 57.695 43.478 0.00 0.00 0.00 4.02
1732 2165 2.899900 GGTCTTCAGCCCAATTCCTTTT 59.100 45.455 0.00 0.00 0.00 2.27
1745 2178 2.806945 TCCTTTTCAGCCGGATGATT 57.193 45.000 25.25 0.00 0.00 2.57
1753 2186 0.034059 AGCCGGATGATTTCCTAGCG 59.966 55.000 5.05 0.00 43.01 4.26
1806 2239 1.305297 TCGCTGAGAGTGTCCCCAT 60.305 57.895 0.00 0.00 0.00 4.00
1914 2347 7.358023 GCATTCAGTTGTGTTTTATTACCGTTG 60.358 37.037 0.00 0.00 0.00 4.10
1918 2351 5.297278 AGTTGTGTTTTATTACCGTTGCTCA 59.703 36.000 0.00 0.00 0.00 4.26
2059 2493 9.570468 AGTATGTTATCTCGAGAAGTAACCATA 57.430 33.333 25.40 20.52 0.00 2.74
2208 2642 5.461737 GTCTCACTACTGAGCTTGCATAATC 59.538 44.000 0.00 0.00 43.45 1.75
2229 2663 6.884280 ATCTGTTCTACAAGTTCCAAAAGG 57.116 37.500 0.00 0.00 0.00 3.11
2313 2747 1.202348 GTGGCTAATTTTCCGCAGCTT 59.798 47.619 0.00 0.00 34.41 3.74
2509 2956 4.631813 CCGCTTTTCTAACATACTTGCTCT 59.368 41.667 0.00 0.00 0.00 4.09
2527 2974 4.870426 TGCTCTATTTCTTGGCTTTAGTCG 59.130 41.667 0.00 0.00 0.00 4.18
2552 3000 8.893727 CGGTTATCTCAAATTAAATCCTCAAGT 58.106 33.333 0.00 0.00 0.00 3.16
2572 3020 9.985318 CTCAAGTTGCTCTTTTAGAATATTCTG 57.015 33.333 25.22 10.59 35.06 3.02
2730 3178 6.719370 ACTGTTTAGCATTTGTATCTGGGAAA 59.281 34.615 0.00 0.00 0.00 3.13
2779 3227 3.879892 GGATTCAGGTGAGATTTGCCTAC 59.120 47.826 0.00 0.00 0.00 3.18
2780 3228 4.384647 GGATTCAGGTGAGATTTGCCTACT 60.385 45.833 0.00 0.00 0.00 2.57
2781 3229 4.640771 TTCAGGTGAGATTTGCCTACTT 57.359 40.909 0.00 0.00 0.00 2.24
2782 3230 4.640771 TCAGGTGAGATTTGCCTACTTT 57.359 40.909 0.00 0.00 0.00 2.66
3028 3480 7.783834 CAGTTGGCTGCAAGTACGTAGTAGT 62.784 48.000 2.72 0.00 41.31 2.73
3029 3481 8.489025 CAGTTGGCTGCAAGTACGTAGTAGTA 62.489 46.154 2.72 0.00 39.81 1.82
3030 3482 9.695217 CAGTTGGCTGCAAGTACGTAGTAGTAT 62.695 44.444 2.72 0.00 39.81 2.12
3079 3537 8.588290 AACAGTATTAAAATGCCTCCACATTA 57.412 30.769 0.00 0.00 39.32 1.90
3242 5873 3.532232 TCCCTAGAGGTTCTAGTGGTCAT 59.468 47.826 11.11 0.00 43.76 3.06
3620 6252 2.355197 TGTAATGGCCAGTCATTCACG 58.645 47.619 10.05 0.00 38.24 4.35
3657 6289 6.806751 TCTCAAGGTATATCCGTTTCTTCTG 58.193 40.000 0.00 0.00 41.99 3.02
4102 6735 7.491682 AGTTGTGAAATCAACAAGCAACTTAT 58.508 30.769 11.22 0.00 46.78 1.73
4166 6799 9.831682 TTATCTGGGGTCTGTATGTATATAACA 57.168 33.333 0.00 0.00 43.86 2.41
4246 6879 7.414222 ACTTATTCCTGACTTCGTAATGGTA 57.586 36.000 0.00 0.00 0.00 3.25
4473 7114 8.624776 AGTATTGGCTTTGCATAACTCTTAATC 58.375 33.333 0.00 0.00 0.00 1.75
4740 7420 7.928307 TCTTTCAGTTCAAGCTATGCTATTT 57.072 32.000 0.00 0.00 38.25 1.40
4742 7422 8.796475 TCTTTCAGTTCAAGCTATGCTATTTTT 58.204 29.630 0.00 0.00 38.25 1.94
4894 7588 7.083858 TCTTGACTTGCAACATATTTTACTGC 58.916 34.615 0.00 0.00 31.96 4.40
5505 8201 0.915364 AAGATGGAGGTCCCTGAAGC 59.085 55.000 0.00 0.00 35.38 3.86
5523 8219 4.348168 TGAAGCTTTTCAAGTACTCCCTCT 59.652 41.667 0.00 0.00 0.00 3.69
5524 8220 4.278975 AGCTTTTCAAGTACTCCCTCTG 57.721 45.455 0.00 0.00 0.00 3.35
5526 8222 4.838986 AGCTTTTCAAGTACTCCCTCTGTA 59.161 41.667 0.00 0.00 0.00 2.74
5527 8223 5.307196 AGCTTTTCAAGTACTCCCTCTGTAA 59.693 40.000 0.00 0.00 0.00 2.41
5528 8224 5.995897 GCTTTTCAAGTACTCCCTCTGTAAA 59.004 40.000 0.00 0.00 0.00 2.01
5529 8225 6.073167 GCTTTTCAAGTACTCCCTCTGTAAAC 60.073 42.308 0.00 0.00 0.00 2.01
5530 8226 6.742559 TTTCAAGTACTCCCTCTGTAAACT 57.257 37.500 0.00 0.00 0.00 2.66
5594 8367 7.949434 ACACTCTTATATTAGTTTACGGAGGG 58.051 38.462 0.00 0.00 0.00 4.30
5643 8416 6.146021 GCTCACAAATCGTTTTCCAATTTGAT 59.854 34.615 12.51 0.00 40.97 2.57
5849 8623 3.594134 TGGTTTGTTTGTGCTCCTTTTG 58.406 40.909 0.00 0.00 0.00 2.44
5850 8624 3.007398 TGGTTTGTTTGTGCTCCTTTTGT 59.993 39.130 0.00 0.00 0.00 2.83
5851 8625 3.616821 GGTTTGTTTGTGCTCCTTTTGTC 59.383 43.478 0.00 0.00 0.00 3.18
5870 8644 5.033589 TGTCTTTTTGCATTGGGAATGTT 57.966 34.783 0.00 0.00 41.01 2.71
5940 8730 1.527370 CGGATCCCTCAAACCCTCC 59.473 63.158 6.06 0.00 0.00 4.30
5958 8748 3.072476 CCTCCCCAAACTTTCACTCACTA 59.928 47.826 0.00 0.00 0.00 2.74
5961 8751 3.434453 CCCCAAACTTTCACTCACTACCA 60.434 47.826 0.00 0.00 0.00 3.25
5983 8773 2.418609 GGTCATAAAATTGCCACCCTGC 60.419 50.000 0.00 0.00 0.00 4.85
5989 8779 4.738998 TTGCCACCCTGCCGGATG 62.739 66.667 5.05 0.00 34.64 3.51
5995 8785 3.882326 CCCTGCCGGATGCTCCAT 61.882 66.667 5.05 0.00 42.00 3.41
6006 8796 2.112718 GCTCCATAGCCAGCCCAG 59.887 66.667 0.00 0.00 43.40 4.45
6037 8827 1.062810 TGTTTGGCACCCCTTAAACCT 60.063 47.619 0.00 0.00 33.33 3.50
6047 8837 6.367161 GCACCCCTTAAACCTAACCAATATA 58.633 40.000 0.00 0.00 0.00 0.86
6063 8853 1.748732 TATATGGGGCGGATTTGGGA 58.251 50.000 0.00 0.00 0.00 4.37
6075 8865 2.363359 GGATTTGGGAATGTCTGGATGC 59.637 50.000 0.00 0.00 0.00 3.91
6104 8894 2.371510 TGTGTTCACCATGTCAGATCCA 59.628 45.455 0.37 0.00 0.00 3.41
6105 8895 3.009363 TGTGTTCACCATGTCAGATCCAT 59.991 43.478 0.37 0.00 0.00 3.41
6124 8914 5.223655 TCCATCAGATTGGACCTATTACCA 58.776 41.667 0.00 0.00 40.90 3.25
6127 8917 5.018539 TCAGATTGGACCTATTACCAACG 57.981 43.478 0.00 0.00 46.67 4.10
6130 8920 5.293569 CAGATTGGACCTATTACCAACGTTC 59.706 44.000 0.00 0.00 46.67 3.95
6145 8935 2.519013 ACGTTCGGGTTTACTAGTCCT 58.481 47.619 0.00 0.00 0.00 3.85
6146 8936 2.893489 ACGTTCGGGTTTACTAGTCCTT 59.107 45.455 0.00 0.00 0.00 3.36
6237 9029 6.609237 ACGTAGTAAAAACAAGGGAAACTC 57.391 37.500 0.00 0.00 41.94 3.01
6238 9030 6.351711 ACGTAGTAAAAACAAGGGAAACTCT 58.648 36.000 0.00 0.00 41.94 3.24
6239 9031 6.825213 ACGTAGTAAAAACAAGGGAAACTCTT 59.175 34.615 0.00 0.00 41.94 2.85
6240 9032 7.337689 ACGTAGTAAAAACAAGGGAAACTCTTT 59.662 33.333 0.00 0.00 41.94 2.52
6241 9033 8.186163 CGTAGTAAAAACAAGGGAAACTCTTTT 58.814 33.333 0.00 0.00 0.00 2.27
6242 9034 9.512435 GTAGTAAAAACAAGGGAAACTCTTTTC 57.488 33.333 0.00 0.00 40.54 2.29
6243 9035 8.129496 AGTAAAAACAAGGGAAACTCTTTTCA 57.871 30.769 0.00 0.00 42.72 2.69
6244 9036 8.758829 AGTAAAAACAAGGGAAACTCTTTTCAT 58.241 29.630 0.00 0.00 42.72 2.57
6245 9037 9.031360 GTAAAAACAAGGGAAACTCTTTTCATC 57.969 33.333 0.00 0.00 42.72 2.92
6246 9038 6.790232 AAACAAGGGAAACTCTTTTCATCA 57.210 33.333 0.00 0.00 42.72 3.07
6247 9039 6.983906 AACAAGGGAAACTCTTTTCATCAT 57.016 33.333 0.00 0.00 42.72 2.45
6248 9040 6.581171 ACAAGGGAAACTCTTTTCATCATC 57.419 37.500 0.00 0.00 42.72 2.92
6249 9041 5.478332 ACAAGGGAAACTCTTTTCATCATCC 59.522 40.000 0.00 0.00 42.72 3.51
6250 9042 4.265073 AGGGAAACTCTTTTCATCATCCG 58.735 43.478 0.00 0.00 42.72 4.18
6251 9043 3.378427 GGGAAACTCTTTTCATCATCCGG 59.622 47.826 0.00 0.00 42.72 5.14
6252 9044 3.181496 GGAAACTCTTTTCATCATCCGGC 60.181 47.826 0.00 0.00 42.72 6.13
6253 9045 1.656652 ACTCTTTTCATCATCCGGCG 58.343 50.000 0.00 0.00 0.00 6.46
6254 9046 0.940126 CTCTTTTCATCATCCGGCGG 59.060 55.000 22.51 22.51 0.00 6.13
6255 9047 0.539518 TCTTTTCATCATCCGGCGGA 59.460 50.000 33.10 33.10 35.55 5.54
6256 9048 1.140852 TCTTTTCATCATCCGGCGGAT 59.859 47.619 34.54 34.54 44.21 4.18
6257 9049 1.532868 CTTTTCATCATCCGGCGGATC 59.467 52.381 36.96 0.00 40.98 3.36
6258 9050 0.599991 TTTCATCATCCGGCGGATCG 60.600 55.000 36.96 29.10 40.98 3.69
6259 9051 1.744320 TTCATCATCCGGCGGATCGT 61.744 55.000 36.96 25.01 40.98 3.73
6260 9052 0.891904 TCATCATCCGGCGGATCGTA 60.892 55.000 36.96 24.94 40.98 3.43
6261 9053 0.456824 CATCATCCGGCGGATCGTAG 60.457 60.000 36.96 25.48 40.98 3.51
6262 9054 2.214181 ATCATCCGGCGGATCGTAGC 62.214 60.000 36.96 0.00 40.98 3.58
6263 9055 4.039357 ATCCGGCGGATCGTAGCG 62.039 66.667 34.54 1.08 38.09 4.26
6270 9062 4.203076 GGATCGTAGCGGCCGTGT 62.203 66.667 28.70 17.28 0.00 4.49
6271 9063 2.654404 GATCGTAGCGGCCGTGTC 60.654 66.667 28.70 15.55 0.00 3.67
6272 9064 4.203076 ATCGTAGCGGCCGTGTCC 62.203 66.667 28.70 10.05 0.00 4.02
6284 9076 3.637273 GTGTCCGCCACTTCCCCT 61.637 66.667 0.00 0.00 41.11 4.79
6285 9077 3.636231 TGTCCGCCACTTCCCCTG 61.636 66.667 0.00 0.00 0.00 4.45
6288 9080 4.431131 CCGCCACTTCCCCTGCAT 62.431 66.667 0.00 0.00 0.00 3.96
6289 9081 2.361610 CGCCACTTCCCCTGCATT 60.362 61.111 0.00 0.00 0.00 3.56
6290 9082 1.077787 CGCCACTTCCCCTGCATTA 60.078 57.895 0.00 0.00 0.00 1.90
6291 9083 1.376609 CGCCACTTCCCCTGCATTAC 61.377 60.000 0.00 0.00 0.00 1.89
6292 9084 0.323360 GCCACTTCCCCTGCATTACA 60.323 55.000 0.00 0.00 0.00 2.41
6293 9085 1.463674 CCACTTCCCCTGCATTACAC 58.536 55.000 0.00 0.00 0.00 2.90
6294 9086 1.271871 CCACTTCCCCTGCATTACACA 60.272 52.381 0.00 0.00 0.00 3.72
6295 9087 2.621407 CCACTTCCCCTGCATTACACAT 60.621 50.000 0.00 0.00 0.00 3.21
6296 9088 2.424601 CACTTCCCCTGCATTACACATG 59.575 50.000 0.00 0.00 0.00 3.21
6297 9089 2.041620 ACTTCCCCTGCATTACACATGT 59.958 45.455 0.00 0.00 0.00 3.21
6298 9090 2.418368 TCCCCTGCATTACACATGTC 57.582 50.000 0.00 0.00 0.00 3.06
6299 9091 1.915489 TCCCCTGCATTACACATGTCT 59.085 47.619 0.00 0.00 0.00 3.41
6300 9092 3.111484 TCCCCTGCATTACACATGTCTA 58.889 45.455 0.00 0.00 0.00 2.59
6301 9093 3.521531 TCCCCTGCATTACACATGTCTAA 59.478 43.478 0.00 0.00 0.00 2.10
6302 9094 3.879295 CCCCTGCATTACACATGTCTAAG 59.121 47.826 0.00 0.00 0.00 2.18
6303 9095 4.517285 CCCTGCATTACACATGTCTAAGT 58.483 43.478 0.00 0.00 0.00 2.24
6304 9096 4.333649 CCCTGCATTACACATGTCTAAGTG 59.666 45.833 0.00 0.00 41.40 3.16
6305 9097 5.178061 CCTGCATTACACATGTCTAAGTGA 58.822 41.667 0.00 0.00 39.03 3.41
6306 9098 5.292834 CCTGCATTACACATGTCTAAGTGAG 59.707 44.000 0.00 0.00 39.03 3.51
6307 9099 6.036577 TGCATTACACATGTCTAAGTGAGA 57.963 37.500 0.00 0.00 39.03 3.27
6308 9100 6.101997 TGCATTACACATGTCTAAGTGAGAG 58.898 40.000 0.00 0.00 39.03 3.20
6309 9101 5.006165 GCATTACACATGTCTAAGTGAGAGC 59.994 44.000 0.00 0.00 39.03 4.09
6310 9102 3.601443 ACACATGTCTAAGTGAGAGCC 57.399 47.619 0.00 0.00 39.03 4.70
6311 9103 2.234908 ACACATGTCTAAGTGAGAGCCC 59.765 50.000 0.00 0.00 39.03 5.19
6312 9104 1.478510 ACATGTCTAAGTGAGAGCCCG 59.521 52.381 0.00 0.00 33.72 6.13
6313 9105 0.461961 ATGTCTAAGTGAGAGCCCGC 59.538 55.000 0.00 0.00 33.72 6.13
6314 9106 1.226717 GTCTAAGTGAGAGCCCGCG 60.227 63.158 0.00 0.00 33.72 6.46
6315 9107 2.105128 CTAAGTGAGAGCCCGCGG 59.895 66.667 21.04 21.04 0.00 6.46
6316 9108 2.361992 TAAGTGAGAGCCCGCGGA 60.362 61.111 30.73 0.90 0.00 5.54
6317 9109 2.615262 CTAAGTGAGAGCCCGCGGAC 62.615 65.000 30.73 17.62 0.00 4.79
6321 9113 4.593864 GAGAGCCCGCGGACCATC 62.594 72.222 30.73 18.07 0.00 3.51
6325 9117 4.796495 GCCCGCGGACCATCCTTT 62.796 66.667 30.73 0.00 33.30 3.11
6326 9118 2.824041 CCCGCGGACCATCCTTTG 60.824 66.667 30.73 0.44 33.30 2.77
6327 9119 2.046314 CCGCGGACCATCCTTTGT 60.046 61.111 24.07 0.00 33.30 2.83
6328 9120 2.106683 CCGCGGACCATCCTTTGTC 61.107 63.158 24.07 0.00 33.30 3.18
6329 9121 1.375396 CGCGGACCATCCTTTGTCA 60.375 57.895 0.00 0.00 33.30 3.58
6330 9122 0.953471 CGCGGACCATCCTTTGTCAA 60.953 55.000 0.00 0.00 33.30 3.18
6331 9123 1.243902 GCGGACCATCCTTTGTCAAA 58.756 50.000 0.00 0.00 33.30 2.69
6332 9124 1.818674 GCGGACCATCCTTTGTCAAAT 59.181 47.619 0.00 0.00 33.30 2.32
6333 9125 2.415893 GCGGACCATCCTTTGTCAAATG 60.416 50.000 0.00 0.00 33.30 2.32
6334 9126 3.081061 CGGACCATCCTTTGTCAAATGA 58.919 45.455 5.85 5.85 33.30 2.57
6335 9127 3.127548 CGGACCATCCTTTGTCAAATGAG 59.872 47.826 8.88 0.52 33.30 2.90
6336 9128 3.119352 GGACCATCCTTTGTCAAATGAGC 60.119 47.826 8.88 0.50 32.53 4.26
6337 9129 3.760684 GACCATCCTTTGTCAAATGAGCT 59.239 43.478 8.88 0.00 0.00 4.09
6338 9130 4.154942 ACCATCCTTTGTCAAATGAGCTT 58.845 39.130 8.88 0.00 0.00 3.74
6339 9131 4.219288 ACCATCCTTTGTCAAATGAGCTTC 59.781 41.667 8.88 0.00 0.00 3.86
6340 9132 4.461781 CCATCCTTTGTCAAATGAGCTTCT 59.538 41.667 8.88 0.00 0.00 2.85
6341 9133 5.399858 CATCCTTTGTCAAATGAGCTTCTG 58.600 41.667 8.88 0.00 0.00 3.02
6342 9134 3.254166 TCCTTTGTCAAATGAGCTTCTGC 59.746 43.478 0.00 0.00 40.05 4.26
6343 9135 3.005050 CCTTTGTCAAATGAGCTTCTGCA 59.995 43.478 0.00 0.00 42.74 4.41
6344 9136 4.500205 CCTTTGTCAAATGAGCTTCTGCAA 60.500 41.667 0.00 0.00 42.74 4.08
6345 9137 3.631145 TGTCAAATGAGCTTCTGCAAC 57.369 42.857 0.00 0.00 42.74 4.17
6346 9138 2.950975 TGTCAAATGAGCTTCTGCAACA 59.049 40.909 0.00 0.00 42.74 3.33
6347 9139 3.004002 TGTCAAATGAGCTTCTGCAACAG 59.996 43.478 0.00 0.00 42.74 3.16
6348 9140 2.555325 TCAAATGAGCTTCTGCAACAGG 59.445 45.455 0.00 0.00 42.74 4.00
6349 9141 2.555325 CAAATGAGCTTCTGCAACAGGA 59.445 45.455 0.00 0.00 42.74 3.86
6350 9142 2.110901 ATGAGCTTCTGCAACAGGAG 57.889 50.000 0.00 0.00 39.94 3.69
6356 9148 2.983229 CTTCTGCAACAGGAGCTATGT 58.017 47.619 0.00 0.00 29.66 2.29
6357 9149 3.341823 CTTCTGCAACAGGAGCTATGTT 58.658 45.455 10.28 10.28 41.47 2.71
6358 9150 3.423539 TCTGCAACAGGAGCTATGTTT 57.576 42.857 12.83 0.00 38.80 2.83
6359 9151 3.338249 TCTGCAACAGGAGCTATGTTTC 58.662 45.455 12.83 9.72 38.80 2.78
6360 9152 3.008375 TCTGCAACAGGAGCTATGTTTCT 59.992 43.478 12.83 0.00 38.80 2.52
6361 9153 4.222810 TCTGCAACAGGAGCTATGTTTCTA 59.777 41.667 12.83 3.86 38.80 2.10
6362 9154 4.905429 TGCAACAGGAGCTATGTTTCTAA 58.095 39.130 12.83 0.00 38.80 2.10
6363 9155 5.312895 TGCAACAGGAGCTATGTTTCTAAA 58.687 37.500 12.83 0.00 38.80 1.85
6364 9156 5.767665 TGCAACAGGAGCTATGTTTCTAAAA 59.232 36.000 12.83 0.00 38.80 1.52
6365 9157 6.086871 GCAACAGGAGCTATGTTTCTAAAAC 58.913 40.000 12.83 0.00 38.80 2.43
6366 9158 6.293955 GCAACAGGAGCTATGTTTCTAAAACA 60.294 38.462 12.83 7.63 38.80 2.83
6367 9159 7.575720 GCAACAGGAGCTATGTTTCTAAAACAT 60.576 37.037 18.78 18.78 38.80 2.71
6368 9160 8.946085 CAACAGGAGCTATGTTTCTAAAACATA 58.054 33.333 18.96 18.96 38.80 2.29
6369 9161 9.686683 AACAGGAGCTATGTTTCTAAAACATAT 57.313 29.630 19.88 10.49 40.91 1.78
6370 9162 9.113838 ACAGGAGCTATGTTTCTAAAACATATG 57.886 33.333 19.88 17.23 40.91 1.78
6371 9163 9.113838 CAGGAGCTATGTTTCTAAAACATATGT 57.886 33.333 19.88 1.41 40.91 2.29
6387 9179 9.515226 AAAACATATGTACTGTTGTAATGGTCT 57.485 29.630 9.21 0.00 36.95 3.85
6389 9181 9.595823 AACATATGTACTGTTGTAATGGTCTAC 57.404 33.333 9.21 0.00 35.57 2.59
6390 9182 7.919091 ACATATGTACTGTTGTAATGGTCTACG 59.081 37.037 6.56 0.00 0.00 3.51
6391 9183 5.963176 TGTACTGTTGTAATGGTCTACGA 57.037 39.130 0.00 0.00 0.00 3.43
6392 9184 5.702865 TGTACTGTTGTAATGGTCTACGAC 58.297 41.667 0.00 0.00 36.90 4.34
6393 9185 5.474532 TGTACTGTTGTAATGGTCTACGACT 59.525 40.000 0.00 0.00 37.17 4.18
6394 9186 4.806330 ACTGTTGTAATGGTCTACGACTG 58.194 43.478 0.00 6.52 39.37 3.51
6395 9187 4.280174 ACTGTTGTAATGGTCTACGACTGT 59.720 41.667 7.48 7.48 40.64 3.55
6396 9188 5.204409 TGTTGTAATGGTCTACGACTGTT 57.796 39.130 0.00 0.00 37.17 3.16
6397 9189 4.986034 TGTTGTAATGGTCTACGACTGTTG 59.014 41.667 0.00 0.00 37.17 3.33
6398 9190 4.859304 TGTAATGGTCTACGACTGTTGT 57.141 40.909 5.89 5.89 32.47 3.32
6399 9191 5.963176 TGTAATGGTCTACGACTGTTGTA 57.037 39.130 7.63 7.63 32.47 2.41
6400 9192 5.702865 TGTAATGGTCTACGACTGTTGTAC 58.297 41.667 3.75 0.00 32.47 2.90
6401 9193 2.975410 TGGTCTACGACTGTTGTACG 57.025 50.000 3.75 2.00 32.47 3.67
6402 9194 2.221169 TGGTCTACGACTGTTGTACGT 58.779 47.619 3.75 0.00 42.70 3.57
6403 9195 2.618241 TGGTCTACGACTGTTGTACGTT 59.382 45.455 3.75 0.00 40.61 3.99
6404 9196 3.066621 TGGTCTACGACTGTTGTACGTTT 59.933 43.478 3.75 0.00 40.61 3.60
6405 9197 4.044426 GGTCTACGACTGTTGTACGTTTT 58.956 43.478 3.75 0.00 40.61 2.43
6406 9198 4.085415 GGTCTACGACTGTTGTACGTTTTG 60.085 45.833 3.75 0.00 40.61 2.44
6407 9199 2.724744 ACGACTGTTGTACGTTTTGC 57.275 45.000 0.00 0.00 36.91 3.68
6408 9200 2.001159 ACGACTGTTGTACGTTTTGCA 58.999 42.857 0.00 0.00 36.91 4.08
6409 9201 2.415857 ACGACTGTTGTACGTTTTGCAA 59.584 40.909 0.00 0.00 36.91 4.08
6416 9208 5.503689 GTTGTACGTTTTGCAACAAAACT 57.496 34.783 25.08 17.38 46.88 2.66
6417 9209 5.907004 GTTGTACGTTTTGCAACAAAACTT 58.093 33.333 25.08 20.64 46.88 2.66
6418 9210 5.748872 TGTACGTTTTGCAACAAAACTTC 57.251 34.783 25.08 17.58 37.83 3.01
6419 9211 5.462405 TGTACGTTTTGCAACAAAACTTCT 58.538 33.333 25.08 14.35 37.83 2.85
6420 9212 5.569823 TGTACGTTTTGCAACAAAACTTCTC 59.430 36.000 25.08 16.27 37.83 2.87
6421 9213 4.805219 ACGTTTTGCAACAAAACTTCTCT 58.195 34.783 25.08 7.37 37.83 3.10
6422 9214 5.227152 ACGTTTTGCAACAAAACTTCTCTT 58.773 33.333 25.08 7.40 37.83 2.85
6423 9215 5.344933 ACGTTTTGCAACAAAACTTCTCTTC 59.655 36.000 25.08 5.46 37.83 2.87
6424 9216 5.572896 CGTTTTGCAACAAAACTTCTCTTCT 59.427 36.000 25.08 0.00 37.83 2.85
6425 9217 6.452872 CGTTTTGCAACAAAACTTCTCTTCTG 60.453 38.462 25.08 9.52 37.83 3.02
6426 9218 5.895636 TTGCAACAAAACTTCTCTTCTGA 57.104 34.783 0.00 0.00 0.00 3.27
6427 9219 5.895636 TGCAACAAAACTTCTCTTCTGAA 57.104 34.783 0.00 0.00 0.00 3.02
6428 9220 6.266168 TGCAACAAAACTTCTCTTCTGAAA 57.734 33.333 0.00 0.00 0.00 2.69
6429 9221 6.866480 TGCAACAAAACTTCTCTTCTGAAAT 58.134 32.000 0.00 0.00 0.00 2.17
6430 9222 7.322664 TGCAACAAAACTTCTCTTCTGAAATT 58.677 30.769 0.00 0.00 0.00 1.82
6431 9223 7.818930 TGCAACAAAACTTCTCTTCTGAAATTT 59.181 29.630 0.00 0.00 28.40 1.82
6432 9224 8.659491 GCAACAAAACTTCTCTTCTGAAATTTT 58.341 29.630 0.00 0.00 36.30 1.82
6447 9239 9.936759 TTCTGAAATTTTTCTACAACAAAACCT 57.063 25.926 4.80 0.00 38.02 3.50
6448 9240 9.581099 TCTGAAATTTTTCTACAACAAAACCTC 57.419 29.630 4.80 0.00 38.02 3.85
6449 9241 8.401046 TGAAATTTTTCTACAACAAAACCTCG 57.599 30.769 4.80 0.00 38.02 4.63
6450 9242 7.489757 TGAAATTTTTCTACAACAAAACCTCGG 59.510 33.333 4.80 0.00 38.02 4.63
6451 9243 5.900865 TTTTTCTACAACAAAACCTCGGT 57.099 34.783 0.00 0.00 0.00 4.69
6452 9244 5.900865 TTTTCTACAACAAAACCTCGGTT 57.099 34.783 0.00 0.00 40.45 4.44
6453 9245 4.886247 TTCTACAACAAAACCTCGGTTG 57.114 40.909 1.44 0.00 45.52 3.77
6454 9246 2.614983 TCTACAACAAAACCTCGGTTGC 59.385 45.455 1.44 0.00 44.27 4.17
6455 9247 1.178276 ACAACAAAACCTCGGTTGCA 58.822 45.000 1.44 0.00 44.27 4.08
6456 9248 1.546476 ACAACAAAACCTCGGTTGCAA 59.454 42.857 1.44 0.00 44.27 4.08
6457 9249 2.028930 ACAACAAAACCTCGGTTGCAAA 60.029 40.909 0.00 0.00 44.27 3.68
6458 9250 2.996621 CAACAAAACCTCGGTTGCAAAA 59.003 40.909 0.00 0.00 38.47 2.44
6459 9251 3.320673 ACAAAACCTCGGTTGCAAAAA 57.679 38.095 0.00 0.00 38.47 1.94
6486 9278 5.588568 CAACAAAACAACTGTTGCAGAAA 57.411 34.783 19.82 0.00 45.07 2.52
6487 9279 6.168164 CAACAAAACAACTGTTGCAGAAAT 57.832 33.333 19.82 0.99 45.07 2.17
6488 9280 7.288317 CAACAAAACAACTGTTGCAGAAATA 57.712 32.000 19.82 0.00 45.07 1.40
6489 9281 7.737395 CAACAAAACAACTGTTGCAGAAATAA 58.263 30.769 19.82 0.00 45.07 1.40
6490 9282 8.389603 CAACAAAACAACTGTTGCAGAAATAAT 58.610 29.630 19.82 0.00 45.07 1.28
6491 9283 9.593134 AACAAAACAACTGTTGCAGAAATAATA 57.407 25.926 19.82 0.00 38.44 0.98
6492 9284 9.030301 ACAAAACAACTGTTGCAGAAATAATAC 57.970 29.630 19.82 0.00 38.44 1.89
6493 9285 9.029243 CAAAACAACTGTTGCAGAAATAATACA 57.971 29.630 19.82 0.00 38.44 2.29
6494 9286 9.593134 AAAACAACTGTTGCAGAAATAATACAA 57.407 25.926 19.82 0.00 38.44 2.41
6495 9287 8.574196 AACAACTGTTGCAGAAATAATACAAC 57.426 30.769 19.82 0.00 40.72 3.32
6496 9288 7.711846 ACAACTGTTGCAGAAATAATACAACA 58.288 30.769 19.82 6.68 45.96 3.33
6497 9289 8.194104 ACAACTGTTGCAGAAATAATACAACAA 58.806 29.630 19.82 0.00 46.95 2.83
6498 9290 8.693504 CAACTGTTGCAGAAATAATACAACAAG 58.306 33.333 7.70 5.57 46.95 3.16
6499 9291 8.165239 ACTGTTGCAGAAATAATACAACAAGA 57.835 30.769 8.08 0.00 46.95 3.02
6500 9292 8.076178 ACTGTTGCAGAAATAATACAACAAGAC 58.924 33.333 8.08 0.00 46.95 3.01
6501 9293 7.367285 TGTTGCAGAAATAATACAACAAGACC 58.633 34.615 4.52 0.00 45.38 3.85
6502 9294 7.230510 TGTTGCAGAAATAATACAACAAGACCT 59.769 33.333 4.52 0.00 45.38 3.85
6503 9295 7.144722 TGCAGAAATAATACAACAAGACCTG 57.855 36.000 0.00 0.00 0.00 4.00
6504 9296 6.714810 TGCAGAAATAATACAACAAGACCTGT 59.285 34.615 0.00 0.00 41.27 4.00
6505 9297 7.023575 GCAGAAATAATACAACAAGACCTGTG 58.976 38.462 0.00 0.00 38.67 3.66
6506 9298 7.308589 GCAGAAATAATACAACAAGACCTGTGT 60.309 37.037 0.00 0.00 38.67 3.72
6507 9299 8.567948 CAGAAATAATACAACAAGACCTGTGTT 58.432 33.333 0.00 0.00 38.67 3.32
6511 9303 2.937469 CAACAAGACCTGTGTTGCAA 57.063 45.000 7.04 0.00 46.63 4.08
6512 9304 3.441496 CAACAAGACCTGTGTTGCAAT 57.559 42.857 0.59 0.00 46.63 3.56
6513 9305 3.117794 CAACAAGACCTGTGTTGCAATG 58.882 45.455 0.59 0.00 46.63 2.82
6514 9306 1.682854 ACAAGACCTGTGTTGCAATGG 59.317 47.619 0.59 5.83 37.36 3.16
6515 9307 1.682854 CAAGACCTGTGTTGCAATGGT 59.317 47.619 0.59 9.18 0.00 3.55
6516 9308 2.071778 AGACCTGTGTTGCAATGGTT 57.928 45.000 0.59 0.00 0.00 3.67
6517 9309 1.682854 AGACCTGTGTTGCAATGGTTG 59.317 47.619 0.59 0.00 0.00 3.77
6518 9310 0.752054 ACCTGTGTTGCAATGGTTGG 59.248 50.000 0.59 4.72 0.00 3.77
6519 9311 0.033781 CCTGTGTTGCAATGGTTGGG 59.966 55.000 0.59 0.00 0.00 4.12
6520 9312 0.600782 CTGTGTTGCAATGGTTGGGC 60.601 55.000 0.59 0.00 0.00 5.36
6521 9313 1.664333 GTGTTGCAATGGTTGGGCG 60.664 57.895 0.59 0.00 0.00 6.13
6522 9314 2.130426 TGTTGCAATGGTTGGGCGT 61.130 52.632 0.59 0.00 0.00 5.68
6523 9315 1.664333 GTTGCAATGGTTGGGCGTG 60.664 57.895 0.59 0.00 0.00 5.34
6524 9316 3.512223 TTGCAATGGTTGGGCGTGC 62.512 57.895 0.00 0.00 35.75 5.34
6525 9317 3.683937 GCAATGGTTGGGCGTGCT 61.684 61.111 0.00 0.00 32.43 4.40
6526 9318 2.568090 CAATGGTTGGGCGTGCTC 59.432 61.111 0.00 0.00 0.00 4.26
6527 9319 3.055719 AATGGTTGGGCGTGCTCG 61.056 61.111 3.31 3.31 40.37 5.03
6537 9329 3.118454 CGTGCTCGGCCGTTTGAT 61.118 61.111 27.15 0.00 0.00 2.57
6538 9330 2.480555 GTGCTCGGCCGTTTGATG 59.519 61.111 27.15 10.45 0.00 3.07
6539 9331 3.430862 TGCTCGGCCGTTTGATGC 61.431 61.111 27.15 19.39 0.00 3.91
6540 9332 4.520846 GCTCGGCCGTTTGATGCG 62.521 66.667 27.15 5.65 0.00 4.73
6549 9341 3.051606 CCGTTTGATGCGGTAAATCTG 57.948 47.619 0.00 0.00 43.84 2.90
6550 9342 2.675844 CCGTTTGATGCGGTAAATCTGA 59.324 45.455 0.00 0.00 43.84 3.27
6551 9343 3.485216 CCGTTTGATGCGGTAAATCTGAC 60.485 47.826 0.00 0.00 43.84 3.51
6552 9344 3.670203 GTTTGATGCGGTAAATCTGACG 58.330 45.455 0.00 0.00 0.00 4.35
6553 9345 1.934589 TGATGCGGTAAATCTGACGG 58.065 50.000 0.00 0.00 0.00 4.79
6554 9346 0.582005 GATGCGGTAAATCTGACGGC 59.418 55.000 0.00 0.00 41.91 5.68
6555 9347 0.178068 ATGCGGTAAATCTGACGGCT 59.822 50.000 0.00 0.00 42.03 5.52
6556 9348 0.459585 TGCGGTAAATCTGACGGCTC 60.460 55.000 0.00 0.00 42.03 4.70
6557 9349 1.480219 GCGGTAAATCTGACGGCTCG 61.480 60.000 0.00 0.00 39.36 5.03
6558 9350 0.179145 CGGTAAATCTGACGGCTCGT 60.179 55.000 0.00 0.00 45.10 4.18
6559 9351 1.278238 GGTAAATCTGACGGCTCGTG 58.722 55.000 4.94 0.00 41.37 4.35
6560 9352 1.135199 GGTAAATCTGACGGCTCGTGA 60.135 52.381 4.94 0.00 41.37 4.35
6561 9353 1.918609 GTAAATCTGACGGCTCGTGAC 59.081 52.381 4.94 0.00 41.37 3.67
6562 9354 0.389948 AAATCTGACGGCTCGTGACC 60.390 55.000 4.94 0.00 41.37 4.02
6563 9355 2.227089 AATCTGACGGCTCGTGACCC 62.227 60.000 4.94 0.00 41.37 4.46
6570 9362 4.148825 GCTCGTGACCCGGCTGAT 62.149 66.667 0.00 0.00 37.11 2.90
6571 9363 2.105128 CTCGTGACCCGGCTGATC 59.895 66.667 0.00 0.00 37.11 2.92
6572 9364 2.362503 TCGTGACCCGGCTGATCT 60.363 61.111 0.00 0.00 37.11 2.75
6573 9365 1.949847 CTCGTGACCCGGCTGATCTT 61.950 60.000 0.00 0.00 37.11 2.40
6574 9366 1.079127 CGTGACCCGGCTGATCTTT 60.079 57.895 0.00 0.00 0.00 2.52
6575 9367 0.673644 CGTGACCCGGCTGATCTTTT 60.674 55.000 0.00 0.00 0.00 2.27
6576 9368 1.404986 CGTGACCCGGCTGATCTTTTA 60.405 52.381 0.00 0.00 0.00 1.52
6577 9369 2.706890 GTGACCCGGCTGATCTTTTAA 58.293 47.619 0.00 0.00 0.00 1.52
6578 9370 3.078837 GTGACCCGGCTGATCTTTTAAA 58.921 45.455 0.00 0.00 0.00 1.52
6579 9371 3.504520 GTGACCCGGCTGATCTTTTAAAA 59.495 43.478 0.00 0.00 0.00 1.52
6580 9372 4.022676 GTGACCCGGCTGATCTTTTAAAAA 60.023 41.667 0.00 0.00 0.00 1.94
6581 9373 4.217550 TGACCCGGCTGATCTTTTAAAAAG 59.782 41.667 0.00 0.00 0.00 2.27
6582 9374 4.403734 ACCCGGCTGATCTTTTAAAAAGA 58.596 39.130 0.00 0.00 0.00 2.52
6583 9375 5.016831 ACCCGGCTGATCTTTTAAAAAGAT 58.983 37.500 0.00 0.00 39.53 2.40
6593 9385 7.979444 ATCTTTTAAAAAGATCAGTCGGTGA 57.021 32.000 1.66 0.00 40.38 4.02
6594 9386 7.795482 TCTTTTAAAAAGATCAGTCGGTGAA 57.205 32.000 1.66 0.00 39.19 3.18
6595 9387 7.636326 TCTTTTAAAAAGATCAGTCGGTGAAC 58.364 34.615 1.66 0.00 39.19 3.18
6596 9388 5.585500 TTAAAAAGATCAGTCGGTGAACG 57.415 39.130 0.00 0.00 39.19 3.95
6597 9389 1.429463 AAAGATCAGTCGGTGAACGC 58.571 50.000 0.00 0.00 43.86 4.84
6598 9390 0.732880 AAGATCAGTCGGTGAACGCG 60.733 55.000 3.53 3.53 43.86 6.01
6599 9391 1.443872 GATCAGTCGGTGAACGCGT 60.444 57.895 5.58 5.58 43.86 6.01
6600 9392 0.179181 GATCAGTCGGTGAACGCGTA 60.179 55.000 14.46 0.00 43.86 4.42
6601 9393 0.179171 ATCAGTCGGTGAACGCGTAG 60.179 55.000 14.46 1.89 43.86 3.51
6602 9394 2.791396 TCAGTCGGTGAACGCGTAGC 62.791 60.000 14.46 6.67 41.39 3.58
6616 9408 2.782198 CGTAGCACGCTCCTAAAAAC 57.218 50.000 0.00 0.00 33.65 2.43
6617 9409 2.063266 CGTAGCACGCTCCTAAAAACA 58.937 47.619 0.00 0.00 33.65 2.83
6618 9410 2.477375 CGTAGCACGCTCCTAAAAACAA 59.523 45.455 0.00 0.00 33.65 2.83
6619 9411 3.124636 CGTAGCACGCTCCTAAAAACAAT 59.875 43.478 0.00 0.00 33.65 2.71
6620 9412 4.327898 CGTAGCACGCTCCTAAAAACAATA 59.672 41.667 0.00 0.00 33.65 1.90
6621 9413 5.006358 CGTAGCACGCTCCTAAAAACAATAT 59.994 40.000 0.00 0.00 33.65 1.28
6622 9414 5.485662 AGCACGCTCCTAAAAACAATATC 57.514 39.130 0.00 0.00 0.00 1.63
6623 9415 4.941263 AGCACGCTCCTAAAAACAATATCA 59.059 37.500 0.00 0.00 0.00 2.15
6624 9416 5.590259 AGCACGCTCCTAAAAACAATATCAT 59.410 36.000 0.00 0.00 0.00 2.45
6625 9417 6.095440 AGCACGCTCCTAAAAACAATATCATT 59.905 34.615 0.00 0.00 0.00 2.57
6626 9418 6.197096 GCACGCTCCTAAAAACAATATCATTG 59.803 38.462 0.00 0.00 0.00 2.82
6627 9419 6.692681 CACGCTCCTAAAAACAATATCATTGG 59.307 38.462 4.09 0.00 0.00 3.16
6628 9420 6.183360 ACGCTCCTAAAAACAATATCATTGGG 60.183 38.462 4.09 0.00 0.00 4.12
6629 9421 6.515832 GCTCCTAAAAACAATATCATTGGGG 58.484 40.000 4.09 0.00 0.00 4.96
6630 9422 6.478512 TCCTAAAAACAATATCATTGGGGC 57.521 37.500 4.09 0.00 0.00 5.80
6631 9423 5.068460 TCCTAAAAACAATATCATTGGGGCG 59.932 40.000 4.09 0.00 0.00 6.13
6639 9431 5.183713 ACAATATCATTGGGGCGTATCATTG 59.816 40.000 4.09 0.00 0.00 2.82
6640 9432 1.979855 TCATTGGGGCGTATCATTGG 58.020 50.000 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
123 124 5.496556 TGATTTGCTTTTATTCTCCTCCGA 58.503 37.500 0.00 0.00 0.00 4.55
164 165 1.556911 ACCGAATGGAGCATCTGAACT 59.443 47.619 0.00 0.00 39.21 3.01
167 168 1.554617 TCAACCGAATGGAGCATCTGA 59.445 47.619 0.00 0.00 39.21 3.27
173 174 1.064654 GCTTCATCAACCGAATGGAGC 59.935 52.381 0.91 0.91 39.43 4.70
184 185 7.065085 GCTTCATTGTACTTCTAGCTTCATCAA 59.935 37.037 0.00 0.00 0.00 2.57
277 278 3.107642 TCCAACTTCTTCCTTCGTGTC 57.892 47.619 0.00 0.00 0.00 3.67
297 298 9.352191 CAGAAGATTATCATTGGGAAAGAAGAT 57.648 33.333 0.00 0.00 0.00 2.40
356 357 9.569167 CGTCTTTTGTCATGAGTTAGACTAATA 57.431 33.333 17.85 0.00 35.81 0.98
367 368 4.511454 TCTTGGAACGTCTTTTGTCATGAG 59.489 41.667 0.00 0.00 0.00 2.90
375 388 7.067008 TCTCTCATTTTTCTTGGAACGTCTTTT 59.933 33.333 0.00 0.00 0.00 2.27
377 390 6.055588 TCTCTCATTTTTCTTGGAACGTCTT 58.944 36.000 0.00 0.00 0.00 3.01
385 398 8.844244 TCTCTTTCTTTCTCTCATTTTTCTTGG 58.156 33.333 0.00 0.00 0.00 3.61
395 408 3.835395 GGTCCCTCTCTTTCTTTCTCTCA 59.165 47.826 0.00 0.00 0.00 3.27
436 450 3.749064 ACGCGTCCTGCTCGATGT 61.749 61.111 5.58 0.00 43.27 3.06
472 486 1.616628 GGACAGGGGTGGATGGAGT 60.617 63.158 0.00 0.00 0.00 3.85
505 519 3.408501 CTCCGCCTCTCTCACGCAG 62.409 68.421 0.00 0.00 0.00 5.18
516 530 3.144193 CGCTCTCTTCCTCCGCCT 61.144 66.667 0.00 0.00 0.00 5.52
561 575 3.692576 CGTTCGTCCTTACCAGATACAG 58.307 50.000 0.00 0.00 0.00 2.74
631 654 4.949856 TCCCTTTGCTTCTTCATTCATACC 59.050 41.667 0.00 0.00 0.00 2.73
633 656 4.635765 CGTCCCTTTGCTTCTTCATTCATA 59.364 41.667 0.00 0.00 0.00 2.15
634 657 3.441572 CGTCCCTTTGCTTCTTCATTCAT 59.558 43.478 0.00 0.00 0.00 2.57
635 658 2.813754 CGTCCCTTTGCTTCTTCATTCA 59.186 45.455 0.00 0.00 0.00 2.57
636 659 2.814336 ACGTCCCTTTGCTTCTTCATTC 59.186 45.455 0.00 0.00 0.00 2.67
637 660 2.863809 ACGTCCCTTTGCTTCTTCATT 58.136 42.857 0.00 0.00 0.00 2.57
747 774 3.551915 GGCCGTCGCGTAAGAAGC 61.552 66.667 5.77 1.74 43.02 3.86
799 831 3.036959 GGGGAGGAGGGGAGGAGA 61.037 72.222 0.00 0.00 0.00 3.71
890 1302 5.220548 CCAAGATTCAATCAGTAAGCAGACG 60.221 44.000 0.00 0.00 0.00 4.18
900 1312 3.370840 TGGGGTCCAAGATTCAATCAG 57.629 47.619 0.00 0.00 0.00 2.90
901 1313 4.335735 AATGGGGTCCAAGATTCAATCA 57.664 40.909 0.00 0.00 36.95 2.57
902 1314 4.202050 CGAAATGGGGTCCAAGATTCAATC 60.202 45.833 0.00 0.00 36.95 2.67
910 1322 1.750778 CAATCCGAAATGGGGTCCAAG 59.249 52.381 0.00 0.00 36.95 3.61
912 1324 0.033601 CCAATCCGAAATGGGGTCCA 60.034 55.000 0.00 0.00 38.76 4.02
1673 2087 6.795098 ACACATTGCGAGTTAAATTAGTGA 57.205 33.333 0.00 0.00 0.00 3.41
1684 2098 4.816385 CCCTGAAATATACACATTGCGAGT 59.184 41.667 0.00 0.00 0.00 4.18
1685 2099 4.214119 CCCCTGAAATATACACATTGCGAG 59.786 45.833 0.00 0.00 0.00 5.03
1686 2100 4.133820 CCCCTGAAATATACACATTGCGA 58.866 43.478 0.00 0.00 0.00 5.10
1688 2102 5.047802 CCATCCCCTGAAATATACACATTGC 60.048 44.000 0.00 0.00 0.00 3.56
1696 2129 5.221925 GCTGAAGACCATCCCCTGAAATATA 60.222 44.000 0.00 0.00 0.00 0.86
1714 2147 3.615834 GCTGAAAAGGAATTGGGCTGAAG 60.616 47.826 0.00 0.00 0.00 3.02
1745 2178 1.511305 CCTCGTGCTTCGCTAGGAA 59.489 57.895 0.00 0.00 36.16 3.36
1914 2347 3.664107 TGGACAAGACACATTACTGAGC 58.336 45.455 0.00 0.00 0.00 4.26
1918 2351 7.639113 TTTTCTTTGGACAAGACACATTACT 57.361 32.000 0.00 0.00 0.00 2.24
1955 2389 4.243007 AGAAATGCAGGGTTTTCTTTCG 57.757 40.909 7.12 0.00 38.67 3.46
2059 2493 6.176183 CAACCCTTTCTTCTCATACAGACAT 58.824 40.000 0.00 0.00 0.00 3.06
2132 2566 5.164012 CCGAGTTACATAGATACCGACGTAG 60.164 48.000 0.00 0.00 0.00 3.51
2208 2642 6.017357 GGTACCTTTTGGAACTTGTAGAACAG 60.017 42.308 4.06 0.00 44.07 3.16
2313 2747 8.183536 GTGTGTGCTGTGATTATTTTATGATCA 58.816 33.333 0.00 0.00 33.49 2.92
2459 2900 4.915158 TCATGCACAGAGAGAGACATAG 57.085 45.455 0.00 0.00 0.00 2.23
2509 2956 7.562135 AGATAACCGACTAAAGCCAAGAAATA 58.438 34.615 0.00 0.00 0.00 1.40
2552 3000 8.950210 CAACTCCAGAATATTCTAAAAGAGCAA 58.050 33.333 17.53 0.00 35.34 3.91
2572 3020 8.768955 CATAATGAGAAACTATACAGCAACTCC 58.231 37.037 0.00 0.00 0.00 3.85
3030 3482 9.502091 GTTCCATTATTAGGTGATACTAATGCA 57.498 33.333 8.32 0.00 42.13 3.96
3031 3483 9.502091 TGTTCCATTATTAGGTGATACTAATGC 57.498 33.333 8.32 0.00 42.13 3.56
3113 3571 3.814842 CCCTGAAAAGAAAATTGCCAACC 59.185 43.478 0.00 0.00 0.00 3.77
3242 5873 4.335416 GAAGAACATCCACCAGAATCCAA 58.665 43.478 0.00 0.00 0.00 3.53
3620 6252 8.697507 ATATACCTTGAGAAACATCCCAAATC 57.302 34.615 0.00 0.00 0.00 2.17
3657 6289 5.747951 GACAGGATTGGATGTCTGAATTC 57.252 43.478 0.00 0.00 42.06 2.17
4102 6735 7.984422 AAGCATAATATACTGTAGCATGCAA 57.016 32.000 21.98 3.87 39.72 4.08
4136 6769 5.152306 ACATACAGACCCCAGATAACCTA 57.848 43.478 0.00 0.00 0.00 3.08
4166 6799 8.043429 AGATTTCATGGACTCAGGAGAATAAT 57.957 34.615 2.79 0.00 35.01 1.28
4591 7271 0.329596 GTCCCAGTTTGCTCCCTGAT 59.670 55.000 0.00 0.00 0.00 2.90
4740 7420 9.753674 ACTGATCAGGATTAAGGAAATGTAAAA 57.246 29.630 26.08 0.00 0.00 1.52
5042 7738 9.616634 CGACCTTACAAAGATATAAAGCGTATA 57.383 33.333 0.00 0.00 0.00 1.47
5043 7739 8.355169 TCGACCTTACAAAGATATAAAGCGTAT 58.645 33.333 0.00 0.00 0.00 3.06
5044 7740 7.706159 TCGACCTTACAAAGATATAAAGCGTA 58.294 34.615 0.00 0.00 0.00 4.42
5045 7741 6.567050 TCGACCTTACAAAGATATAAAGCGT 58.433 36.000 0.00 0.00 0.00 5.07
5046 7742 7.222224 AGTTCGACCTTACAAAGATATAAAGCG 59.778 37.037 0.00 0.00 0.00 4.68
5568 8264 8.419442 CCCTCCGTAAACTAATATAAGAGTGTT 58.581 37.037 0.00 0.00 0.00 3.32
5571 8267 8.003629 ACTCCCTCCGTAAACTAATATAAGAGT 58.996 37.037 0.00 0.00 0.00 3.24
5572 8268 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
5578 8274 9.986157 ATCATATACTCCCTCCGTAAACTAATA 57.014 33.333 0.00 0.00 0.00 0.98
5581 8277 9.812347 TTTATCATATACTCCCTCCGTAAACTA 57.188 33.333 0.00 0.00 0.00 2.24
5583 8279 9.768662 TTTTTATCATATACTCCCTCCGTAAAC 57.231 33.333 0.00 0.00 0.00 2.01
5614 8387 4.358851 TGGAAAACGATTTGTGAGCAAAG 58.641 39.130 0.00 0.00 46.30 2.77
5772 8545 4.498345 GCCCGTCATCTCTAAAGAGTACAG 60.498 50.000 6.87 0.00 42.60 2.74
5849 8623 6.183360 ACAAAACATTCCCAATGCAAAAAGAC 60.183 34.615 0.00 0.00 42.69 3.01
5850 8624 5.884792 ACAAAACATTCCCAATGCAAAAAGA 59.115 32.000 0.00 0.00 42.69 2.52
5851 8625 6.134040 ACAAAACATTCCCAATGCAAAAAG 57.866 33.333 0.00 0.00 42.69 2.27
5870 8644 8.773645 CATCAATAAAGACAGCCGATATACAAA 58.226 33.333 0.00 0.00 0.00 2.83
5940 8730 3.815401 CTGGTAGTGAGTGAAAGTTTGGG 59.185 47.826 0.00 0.00 0.00 4.12
5958 8748 2.831526 GGTGGCAATTTTATGACCTGGT 59.168 45.455 0.00 0.00 0.00 4.00
5961 8751 3.099141 CAGGGTGGCAATTTTATGACCT 58.901 45.455 0.00 0.00 0.00 3.85
5995 8785 0.034186 CCAAATGTCTGGGCTGGCTA 60.034 55.000 0.00 0.00 32.32 3.93
6006 8796 0.392336 TGCCAAACAGCCCAAATGTC 59.608 50.000 0.00 0.00 0.00 3.06
6020 8810 2.491271 GGTTAGGTTTAAGGGGTGCCAA 60.491 50.000 0.00 0.00 0.00 4.52
6037 8827 4.938575 AATCCGCCCCATATATTGGTTA 57.061 40.909 2.35 0.00 44.83 2.85
6047 8837 0.760189 CATTCCCAAATCCGCCCCAT 60.760 55.000 0.00 0.00 0.00 4.00
6063 8853 2.514592 CGGGCGCATCCAGACATT 60.515 61.111 10.83 0.00 36.21 2.71
6104 8894 5.130477 ACGTTGGTAATAGGTCCAATCTGAT 59.870 40.000 0.00 0.00 44.03 2.90
6105 8895 4.468510 ACGTTGGTAATAGGTCCAATCTGA 59.531 41.667 0.00 0.00 44.03 3.27
6117 8907 5.146010 AGTAAACCCGAACGTTGGTAATA 57.854 39.130 5.00 2.54 33.52 0.98
6124 8914 2.893489 AGGACTAGTAAACCCGAACGTT 59.107 45.455 0.00 0.00 0.00 3.99
6125 8915 2.519013 AGGACTAGTAAACCCGAACGT 58.481 47.619 0.00 0.00 0.00 3.99
6127 8917 4.263018 ACAAGGACTAGTAAACCCGAAC 57.737 45.455 0.00 0.00 0.00 3.95
6130 8920 6.093082 CCAAAATACAAGGACTAGTAAACCCG 59.907 42.308 0.00 0.00 0.00 5.28
6229 9021 3.378427 CCGGATGATGAAAAGAGTTTCCC 59.622 47.826 0.00 0.00 42.20 3.97
6230 9022 3.181496 GCCGGATGATGAAAAGAGTTTCC 60.181 47.826 5.05 0.00 42.20 3.13
6231 9023 3.485877 CGCCGGATGATGAAAAGAGTTTC 60.486 47.826 5.05 0.00 43.04 2.78
6232 9024 2.420022 CGCCGGATGATGAAAAGAGTTT 59.580 45.455 5.05 0.00 0.00 2.66
6233 9025 2.009774 CGCCGGATGATGAAAAGAGTT 58.990 47.619 5.05 0.00 0.00 3.01
6234 9026 1.656652 CGCCGGATGATGAAAAGAGT 58.343 50.000 5.05 0.00 0.00 3.24
6235 9027 0.940126 CCGCCGGATGATGAAAAGAG 59.060 55.000 5.05 0.00 0.00 2.85
6236 9028 0.539518 TCCGCCGGATGATGAAAAGA 59.460 50.000 5.05 0.00 0.00 2.52
6237 9029 1.532868 GATCCGCCGGATGATGAAAAG 59.467 52.381 25.80 0.00 43.27 2.27
6238 9030 1.593196 GATCCGCCGGATGATGAAAA 58.407 50.000 25.80 0.00 43.27 2.29
6239 9031 0.599991 CGATCCGCCGGATGATGAAA 60.600 55.000 25.80 0.00 43.27 2.69
6240 9032 1.006220 CGATCCGCCGGATGATGAA 60.006 57.895 25.80 0.00 43.27 2.57
6241 9033 0.891904 TACGATCCGCCGGATGATGA 60.892 55.000 25.80 2.75 43.27 2.92
6242 9034 0.456824 CTACGATCCGCCGGATGATG 60.457 60.000 25.80 15.18 43.27 3.07
6243 9035 1.883732 CTACGATCCGCCGGATGAT 59.116 57.895 25.80 13.56 43.27 2.45
6244 9036 2.916052 GCTACGATCCGCCGGATGA 61.916 63.158 25.80 7.59 43.27 2.92
6245 9037 2.430921 GCTACGATCCGCCGGATG 60.431 66.667 25.80 17.53 43.27 3.51
6246 9038 4.039357 CGCTACGATCCGCCGGAT 62.039 66.667 20.53 20.53 46.28 4.18
6253 9045 4.203076 ACACGGCCGCTACGATCC 62.203 66.667 28.58 0.00 34.93 3.36
6254 9046 2.654404 GACACGGCCGCTACGATC 60.654 66.667 28.58 10.12 34.93 3.69
6255 9047 4.203076 GGACACGGCCGCTACGAT 62.203 66.667 28.58 0.00 34.93 3.73
6268 9060 3.636231 CAGGGGAAGTGGCGGACA 61.636 66.667 0.00 0.00 0.00 4.02
6271 9063 2.550699 TAATGCAGGGGAAGTGGCGG 62.551 60.000 0.00 0.00 0.00 6.13
6272 9064 1.077787 TAATGCAGGGGAAGTGGCG 60.078 57.895 0.00 0.00 0.00 5.69
6273 9065 0.323360 TGTAATGCAGGGGAAGTGGC 60.323 55.000 0.00 0.00 0.00 5.01
6274 9066 1.271871 TGTGTAATGCAGGGGAAGTGG 60.272 52.381 0.00 0.00 0.00 4.00
6275 9067 2.198827 TGTGTAATGCAGGGGAAGTG 57.801 50.000 0.00 0.00 0.00 3.16
6276 9068 2.041620 ACATGTGTAATGCAGGGGAAGT 59.958 45.455 0.00 0.00 0.00 3.01
6277 9069 2.684881 GACATGTGTAATGCAGGGGAAG 59.315 50.000 1.15 0.00 0.00 3.46
6278 9070 2.308570 AGACATGTGTAATGCAGGGGAA 59.691 45.455 1.15 0.00 0.00 3.97
6279 9071 1.915489 AGACATGTGTAATGCAGGGGA 59.085 47.619 1.15 0.00 0.00 4.81
6280 9072 2.425143 AGACATGTGTAATGCAGGGG 57.575 50.000 1.15 0.00 0.00 4.79
6281 9073 4.333649 CACTTAGACATGTGTAATGCAGGG 59.666 45.833 15.13 6.01 0.00 4.45
6282 9074 5.178061 TCACTTAGACATGTGTAATGCAGG 58.822 41.667 15.13 6.65 35.82 4.85
6283 9075 6.101997 TCTCACTTAGACATGTGTAATGCAG 58.898 40.000 15.13 10.88 35.82 4.41
6284 9076 6.036577 TCTCACTTAGACATGTGTAATGCA 57.963 37.500 15.13 0.00 35.82 3.96
6285 9077 5.006165 GCTCTCACTTAGACATGTGTAATGC 59.994 44.000 15.13 9.47 35.82 3.56
6286 9078 5.521735 GGCTCTCACTTAGACATGTGTAATG 59.478 44.000 15.13 14.40 35.82 1.90
6287 9079 5.395768 GGGCTCTCACTTAGACATGTGTAAT 60.396 44.000 15.13 4.35 35.82 1.89
6288 9080 4.081642 GGGCTCTCACTTAGACATGTGTAA 60.082 45.833 14.16 14.16 35.82 2.41
6289 9081 3.447586 GGGCTCTCACTTAGACATGTGTA 59.552 47.826 1.15 0.00 35.82 2.90
6290 9082 2.234908 GGGCTCTCACTTAGACATGTGT 59.765 50.000 1.15 0.22 35.82 3.72
6291 9083 2.736719 CGGGCTCTCACTTAGACATGTG 60.737 54.545 1.15 0.00 35.68 3.21
6292 9084 1.478510 CGGGCTCTCACTTAGACATGT 59.521 52.381 0.00 0.00 0.00 3.21
6293 9085 1.804372 GCGGGCTCTCACTTAGACATG 60.804 57.143 0.00 0.00 0.00 3.21
6294 9086 0.461961 GCGGGCTCTCACTTAGACAT 59.538 55.000 0.00 0.00 0.00 3.06
6295 9087 1.890894 GCGGGCTCTCACTTAGACA 59.109 57.895 0.00 0.00 0.00 3.41
6296 9088 1.226717 CGCGGGCTCTCACTTAGAC 60.227 63.158 0.00 0.00 0.00 2.59
6297 9089 2.415608 CCGCGGGCTCTCACTTAGA 61.416 63.158 20.10 0.00 0.00 2.10
6298 9090 2.105128 CCGCGGGCTCTCACTTAG 59.895 66.667 20.10 0.00 0.00 2.18
6299 9091 2.361992 TCCGCGGGCTCTCACTTA 60.362 61.111 27.83 0.00 0.00 2.24
6300 9092 4.070552 GTCCGCGGGCTCTCACTT 62.071 66.667 25.46 0.00 0.00 3.16
6304 9096 4.593864 GATGGTCCGCGGGCTCTC 62.594 72.222 31.31 21.81 0.00 3.20
6308 9100 4.796495 AAAGGATGGTCCGCGGGC 62.796 66.667 27.83 26.31 42.75 6.13
6309 9101 2.824041 CAAAGGATGGTCCGCGGG 60.824 66.667 27.83 6.80 42.75 6.13
6310 9102 2.046314 ACAAAGGATGGTCCGCGG 60.046 61.111 22.12 22.12 42.75 6.46
6311 9103 0.953471 TTGACAAAGGATGGTCCGCG 60.953 55.000 0.00 0.00 42.75 6.46
6312 9104 1.243902 TTTGACAAAGGATGGTCCGC 58.756 50.000 0.00 0.00 42.75 5.54
6313 9105 3.081061 TCATTTGACAAAGGATGGTCCG 58.919 45.455 11.05 0.00 42.75 4.79
6314 9106 3.119352 GCTCATTTGACAAAGGATGGTCC 60.119 47.826 15.04 0.17 36.58 4.46
6315 9107 3.760684 AGCTCATTTGACAAAGGATGGTC 59.239 43.478 15.04 6.10 30.06 4.02
6316 9108 3.771216 AGCTCATTTGACAAAGGATGGT 58.229 40.909 15.04 11.73 30.06 3.55
6317 9109 4.461781 AGAAGCTCATTTGACAAAGGATGG 59.538 41.667 15.04 6.60 30.06 3.51
6318 9110 5.399858 CAGAAGCTCATTTGACAAAGGATG 58.600 41.667 15.04 10.56 30.06 3.51
6319 9111 4.082354 GCAGAAGCTCATTTGACAAAGGAT 60.082 41.667 15.04 1.55 37.91 3.24
6320 9112 3.254166 GCAGAAGCTCATTTGACAAAGGA 59.746 43.478 14.07 14.07 37.91 3.36
6321 9113 3.005050 TGCAGAAGCTCATTTGACAAAGG 59.995 43.478 6.24 6.24 42.74 3.11
6322 9114 4.233123 TGCAGAAGCTCATTTGACAAAG 57.767 40.909 6.77 0.00 42.74 2.77
6323 9115 4.142204 TGTTGCAGAAGCTCATTTGACAAA 60.142 37.500 2.48 2.48 42.74 2.83
6324 9116 3.380954 TGTTGCAGAAGCTCATTTGACAA 59.619 39.130 0.00 0.00 42.74 3.18
6325 9117 2.950975 TGTTGCAGAAGCTCATTTGACA 59.049 40.909 0.00 0.00 42.74 3.58
6326 9118 3.562505 CTGTTGCAGAAGCTCATTTGAC 58.437 45.455 0.00 0.00 42.74 3.18
6327 9119 2.555325 CCTGTTGCAGAAGCTCATTTGA 59.445 45.455 0.00 0.00 42.74 2.69
6328 9120 2.555325 TCCTGTTGCAGAAGCTCATTTG 59.445 45.455 0.00 0.00 42.74 2.32
6329 9121 2.818432 CTCCTGTTGCAGAAGCTCATTT 59.182 45.455 0.00 0.00 42.74 2.32
6330 9122 2.434428 CTCCTGTTGCAGAAGCTCATT 58.566 47.619 0.00 0.00 42.74 2.57
6331 9123 1.949547 GCTCCTGTTGCAGAAGCTCAT 60.950 52.381 0.08 0.00 42.74 2.90
6332 9124 0.604780 GCTCCTGTTGCAGAAGCTCA 60.605 55.000 0.08 0.00 42.74 4.26
6333 9125 0.321475 AGCTCCTGTTGCAGAAGCTC 60.321 55.000 4.04 0.00 42.74 4.09
6334 9126 0.979665 TAGCTCCTGTTGCAGAAGCT 59.020 50.000 13.92 13.92 42.74 3.74
6335 9127 1.669779 CATAGCTCCTGTTGCAGAAGC 59.330 52.381 0.00 0.00 42.57 3.86
6336 9128 2.983229 ACATAGCTCCTGTTGCAGAAG 58.017 47.619 0.00 0.00 32.44 2.85
6337 9129 3.423539 AACATAGCTCCTGTTGCAGAA 57.576 42.857 12.43 0.00 35.57 3.02
6338 9130 3.008375 AGAAACATAGCTCCTGTTGCAGA 59.992 43.478 17.89 0.00 36.95 4.26
6339 9131 3.341823 AGAAACATAGCTCCTGTTGCAG 58.658 45.455 17.89 0.00 36.95 4.41
6340 9132 3.423539 AGAAACATAGCTCCTGTTGCA 57.576 42.857 17.89 0.00 36.95 4.08
6341 9133 5.880054 TTTAGAAACATAGCTCCTGTTGC 57.120 39.130 13.59 12.13 36.95 4.17
6342 9134 7.202016 TGTTTTAGAAACATAGCTCCTGTTG 57.798 36.000 13.59 0.00 36.95 3.33
6343 9135 9.686683 ATATGTTTTAGAAACATAGCTCCTGTT 57.313 29.630 22.87 8.40 43.73 3.16
6344 9136 9.113838 CATATGTTTTAGAAACATAGCTCCTGT 57.886 33.333 22.87 8.93 43.73 4.00
6345 9137 9.113838 ACATATGTTTTAGAAACATAGCTCCTG 57.886 33.333 22.87 18.97 43.73 3.86
6361 9153 9.515226 AGACCATTACAACAGTACATATGTTTT 57.485 29.630 14.77 0.00 38.80 2.43
6363 9155 9.595823 GTAGACCATTACAACAGTACATATGTT 57.404 33.333 14.77 0.00 41.47 2.71
6364 9156 7.919091 CGTAGACCATTACAACAGTACATATGT 59.081 37.037 13.93 13.93 0.00 2.29
6365 9157 8.132995 TCGTAGACCATTACAACAGTACATATG 58.867 37.037 0.00 0.00 0.00 1.78
6366 9158 8.229253 TCGTAGACCATTACAACAGTACATAT 57.771 34.615 0.00 0.00 0.00 1.78
6367 9159 7.628769 TCGTAGACCATTACAACAGTACATA 57.371 36.000 0.00 0.00 0.00 2.29
6368 9160 6.519679 TCGTAGACCATTACAACAGTACAT 57.480 37.500 0.00 0.00 0.00 2.29
6369 9161 5.963176 TCGTAGACCATTACAACAGTACA 57.037 39.130 0.00 0.00 0.00 2.90
6385 9177 3.486841 GCAAAACGTACAACAGTCGTAGA 59.513 43.478 0.00 0.00 36.80 2.59
6386 9178 3.243410 TGCAAAACGTACAACAGTCGTAG 59.757 43.478 0.00 0.00 36.80 3.51
6387 9179 3.185330 TGCAAAACGTACAACAGTCGTA 58.815 40.909 0.00 0.00 36.80 3.43
6388 9180 2.001159 TGCAAAACGTACAACAGTCGT 58.999 42.857 0.00 0.00 39.49 4.34
6389 9181 2.722936 TGCAAAACGTACAACAGTCG 57.277 45.000 0.00 0.00 0.00 4.18
6390 9182 3.749404 TGTTGCAAAACGTACAACAGTC 58.251 40.909 17.26 2.42 46.33 3.51
6391 9183 3.833545 TGTTGCAAAACGTACAACAGT 57.166 38.095 17.26 0.00 46.33 3.55
6394 9186 5.503689 AGTTTTGTTGCAAAACGTACAAC 57.496 34.783 23.16 13.59 43.01 3.32
6395 9187 5.921408 AGAAGTTTTGTTGCAAAACGTACAA 59.079 32.000 23.16 0.00 43.01 2.41
6396 9188 5.462405 AGAAGTTTTGTTGCAAAACGTACA 58.538 33.333 23.16 0.00 43.01 2.90
6397 9189 5.798434 AGAGAAGTTTTGTTGCAAAACGTAC 59.202 36.000 23.16 18.97 43.01 3.67
6398 9190 5.945155 AGAGAAGTTTTGTTGCAAAACGTA 58.055 33.333 23.16 0.00 43.01 3.57
6399 9191 4.805219 AGAGAAGTTTTGTTGCAAAACGT 58.195 34.783 23.16 21.51 43.01 3.99
6400 9192 5.572896 AGAAGAGAAGTTTTGTTGCAAAACG 59.427 36.000 23.16 0.00 43.01 3.60
6401 9193 6.586082 TCAGAAGAGAAGTTTTGTTGCAAAAC 59.414 34.615 22.46 22.46 39.67 2.43
6402 9194 6.686630 TCAGAAGAGAAGTTTTGTTGCAAAA 58.313 32.000 0.00 0.00 0.00 2.44
6403 9195 6.266168 TCAGAAGAGAAGTTTTGTTGCAAA 57.734 33.333 0.00 0.00 0.00 3.68
6404 9196 5.895636 TCAGAAGAGAAGTTTTGTTGCAA 57.104 34.783 0.00 0.00 0.00 4.08
6405 9197 5.895636 TTCAGAAGAGAAGTTTTGTTGCA 57.104 34.783 0.00 0.00 0.00 4.08
6406 9198 7.761651 AATTTCAGAAGAGAAGTTTTGTTGC 57.238 32.000 0.00 0.00 0.00 4.17
6421 9213 9.936759 AGGTTTTGTTGTAGAAAAATTTCAGAA 57.063 25.926 8.47 0.00 39.61 3.02
6422 9214 9.581099 GAGGTTTTGTTGTAGAAAAATTTCAGA 57.419 29.630 8.47 0.00 39.61 3.27
6423 9215 8.531530 CGAGGTTTTGTTGTAGAAAAATTTCAG 58.468 33.333 8.47 0.00 39.61 3.02
6424 9216 7.489757 CCGAGGTTTTGTTGTAGAAAAATTTCA 59.510 33.333 8.47 0.00 39.61 2.69
6425 9217 7.490079 ACCGAGGTTTTGTTGTAGAAAAATTTC 59.510 33.333 0.00 0.00 37.45 2.17
6426 9218 7.324935 ACCGAGGTTTTGTTGTAGAAAAATTT 58.675 30.769 0.00 0.00 0.00 1.82
6427 9219 6.869695 ACCGAGGTTTTGTTGTAGAAAAATT 58.130 32.000 0.00 0.00 0.00 1.82
6428 9220 6.459670 ACCGAGGTTTTGTTGTAGAAAAAT 57.540 33.333 0.00 0.00 0.00 1.82
6429 9221 5.900865 ACCGAGGTTTTGTTGTAGAAAAA 57.099 34.783 0.00 0.00 0.00 1.94
6430 9222 5.642686 CAACCGAGGTTTTGTTGTAGAAAA 58.357 37.500 4.52 0.00 36.00 2.29
6431 9223 4.439016 GCAACCGAGGTTTTGTTGTAGAAA 60.439 41.667 4.52 0.00 41.04 2.52
6432 9224 3.065648 GCAACCGAGGTTTTGTTGTAGAA 59.934 43.478 4.52 0.00 41.04 2.10
6433 9225 2.614983 GCAACCGAGGTTTTGTTGTAGA 59.385 45.455 4.52 0.00 41.04 2.59
6434 9226 2.356382 TGCAACCGAGGTTTTGTTGTAG 59.644 45.455 4.52 0.00 41.04 2.74
6435 9227 2.366533 TGCAACCGAGGTTTTGTTGTA 58.633 42.857 4.52 0.00 41.04 2.41
6436 9228 1.178276 TGCAACCGAGGTTTTGTTGT 58.822 45.000 4.52 0.00 41.04 3.32
6437 9229 2.285827 TTGCAACCGAGGTTTTGTTG 57.714 45.000 4.52 0.00 41.69 3.33
6438 9230 3.320673 TTTTGCAACCGAGGTTTTGTT 57.679 38.095 4.52 0.00 36.00 2.83
6439 9231 3.320673 TTTTTGCAACCGAGGTTTTGT 57.679 38.095 4.52 0.00 36.00 2.83
6465 9257 7.897575 TTATTTCTGCAACAGTTGTTTTGTT 57.102 28.000 14.88 0.00 39.23 2.83
6466 9258 9.030301 GTATTATTTCTGCAACAGTTGTTTTGT 57.970 29.630 14.88 0.73 35.83 2.83
6467 9259 9.029243 TGTATTATTTCTGCAACAGTTGTTTTG 57.971 29.630 14.88 3.44 35.83 2.44
6468 9260 9.593134 TTGTATTATTTCTGCAACAGTTGTTTT 57.407 25.926 14.88 0.00 35.83 2.43
6469 9261 9.030301 GTTGTATTATTTCTGCAACAGTTGTTT 57.970 29.630 14.88 0.00 39.17 2.83
6470 9262 8.194104 TGTTGTATTATTTCTGCAACAGTTGTT 58.806 29.630 14.88 0.00 42.68 2.83
6471 9263 7.711846 TGTTGTATTATTTCTGCAACAGTTGT 58.288 30.769 14.88 0.00 42.68 3.32
6472 9264 8.572828 TTGTTGTATTATTTCTGCAACAGTTG 57.427 30.769 9.12 9.12 46.27 3.16
6473 9265 8.629158 TCTTGTTGTATTATTTCTGCAACAGTT 58.371 29.630 8.14 0.00 46.27 3.16
6474 9266 8.076178 GTCTTGTTGTATTATTTCTGCAACAGT 58.924 33.333 8.14 0.00 46.27 3.55
6475 9267 7.538678 GGTCTTGTTGTATTATTTCTGCAACAG 59.461 37.037 8.14 0.00 46.27 3.16
6476 9268 7.230510 AGGTCTTGTTGTATTATTTCTGCAACA 59.769 33.333 4.57 4.57 44.83 3.33
6477 9269 7.538678 CAGGTCTTGTTGTATTATTTCTGCAAC 59.461 37.037 0.00 0.00 39.62 4.17
6478 9270 7.230510 ACAGGTCTTGTTGTATTATTTCTGCAA 59.769 33.333 0.00 0.00 36.31 4.08
6479 9271 6.714810 ACAGGTCTTGTTGTATTATTTCTGCA 59.285 34.615 0.00 0.00 36.31 4.41
6480 9272 7.023575 CACAGGTCTTGTTGTATTATTTCTGC 58.976 38.462 0.00 0.00 38.16 4.26
6481 9273 8.099364 ACACAGGTCTTGTTGTATTATTTCTG 57.901 34.615 0.00 0.00 38.16 3.02
6482 9274 8.567948 CAACACAGGTCTTGTTGTATTATTTCT 58.432 33.333 6.99 0.00 45.85 2.52
6483 9275 8.728088 CAACACAGGTCTTGTTGTATTATTTC 57.272 34.615 6.99 0.00 45.85 2.17
6493 9285 2.101249 CCATTGCAACACAGGTCTTGTT 59.899 45.455 0.00 0.00 38.16 2.83
6494 9286 1.682854 CCATTGCAACACAGGTCTTGT 59.317 47.619 0.00 0.00 41.94 3.16
6495 9287 1.682854 ACCATTGCAACACAGGTCTTG 59.317 47.619 0.00 0.00 0.00 3.02
6496 9288 2.071778 ACCATTGCAACACAGGTCTT 57.928 45.000 0.00 0.00 0.00 3.01
6497 9289 1.682854 CAACCATTGCAACACAGGTCT 59.317 47.619 0.00 0.00 0.00 3.85
6498 9290 1.269726 CCAACCATTGCAACACAGGTC 60.270 52.381 0.00 0.00 0.00 3.85
6499 9291 0.752054 CCAACCATTGCAACACAGGT 59.248 50.000 0.00 5.00 0.00 4.00
6500 9292 0.033781 CCCAACCATTGCAACACAGG 59.966 55.000 0.00 4.29 0.00 4.00
6501 9293 0.600782 GCCCAACCATTGCAACACAG 60.601 55.000 0.00 0.00 0.00 3.66
6502 9294 1.445095 GCCCAACCATTGCAACACA 59.555 52.632 0.00 0.00 0.00 3.72
6503 9295 1.664333 CGCCCAACCATTGCAACAC 60.664 57.895 0.00 0.00 0.00 3.32
6504 9296 2.130426 ACGCCCAACCATTGCAACA 61.130 52.632 0.00 0.00 0.00 3.33
6505 9297 1.664333 CACGCCCAACCATTGCAAC 60.664 57.895 0.00 0.00 0.00 4.17
6506 9298 2.733301 CACGCCCAACCATTGCAA 59.267 55.556 0.00 0.00 0.00 4.08
6507 9299 3.988525 GCACGCCCAACCATTGCA 61.989 61.111 0.00 0.00 33.24 4.08
6508 9300 3.631487 GAGCACGCCCAACCATTGC 62.631 63.158 0.00 0.00 0.00 3.56
6509 9301 2.568090 GAGCACGCCCAACCATTG 59.432 61.111 0.00 0.00 0.00 2.82
6510 9302 3.055719 CGAGCACGCCCAACCATT 61.056 61.111 0.00 0.00 0.00 3.16
6520 9312 3.118454 ATCAAACGGCCGAGCACG 61.118 61.111 35.90 15.09 39.43 5.34
6521 9313 2.480555 CATCAAACGGCCGAGCAC 59.519 61.111 35.90 0.00 0.00 4.40
6522 9314 3.430862 GCATCAAACGGCCGAGCA 61.431 61.111 35.90 13.00 0.00 4.26
6523 9315 4.520846 CGCATCAAACGGCCGAGC 62.521 66.667 35.90 22.18 0.00 5.03
6524 9316 3.864686 CCGCATCAAACGGCCGAG 61.865 66.667 35.90 20.98 44.90 4.63
6530 9322 3.670203 GTCAGATTTACCGCATCAAACG 58.330 45.455 0.00 0.00 0.00 3.60
6531 9323 3.485216 CCGTCAGATTTACCGCATCAAAC 60.485 47.826 0.00 0.00 0.00 2.93
6532 9324 2.675844 CCGTCAGATTTACCGCATCAAA 59.324 45.455 0.00 0.00 0.00 2.69
6533 9325 2.276201 CCGTCAGATTTACCGCATCAA 58.724 47.619 0.00 0.00 0.00 2.57
6534 9326 1.934589 CCGTCAGATTTACCGCATCA 58.065 50.000 0.00 0.00 0.00 3.07
6535 9327 0.582005 GCCGTCAGATTTACCGCATC 59.418 55.000 0.00 0.00 0.00 3.91
6536 9328 0.178068 AGCCGTCAGATTTACCGCAT 59.822 50.000 0.00 0.00 0.00 4.73
6537 9329 0.459585 GAGCCGTCAGATTTACCGCA 60.460 55.000 0.00 0.00 0.00 5.69
6538 9330 1.480219 CGAGCCGTCAGATTTACCGC 61.480 60.000 0.00 0.00 0.00 5.68
6539 9331 0.179145 ACGAGCCGTCAGATTTACCG 60.179 55.000 0.00 0.00 33.69 4.02
6540 9332 1.135199 TCACGAGCCGTCAGATTTACC 60.135 52.381 0.00 0.00 38.32 2.85
6541 9333 1.918609 GTCACGAGCCGTCAGATTTAC 59.081 52.381 0.00 0.00 38.32 2.01
6542 9334 1.135199 GGTCACGAGCCGTCAGATTTA 60.135 52.381 0.00 0.00 38.32 1.40
6543 9335 0.389948 GGTCACGAGCCGTCAGATTT 60.390 55.000 0.00 0.00 38.32 2.17
6544 9336 1.215647 GGTCACGAGCCGTCAGATT 59.784 57.895 0.00 0.00 38.32 2.40
6545 9337 2.711922 GGGTCACGAGCCGTCAGAT 61.712 63.158 0.00 0.00 38.32 2.90
6546 9338 3.371063 GGGTCACGAGCCGTCAGA 61.371 66.667 0.00 0.00 38.32 3.27
6556 9348 0.673644 AAAAGATCAGCCGGGTCACG 60.674 55.000 1.27 0.00 43.80 4.35
6557 9349 2.396590 TAAAAGATCAGCCGGGTCAC 57.603 50.000 1.27 0.00 0.00 3.67
6558 9350 3.426787 TTTAAAAGATCAGCCGGGTCA 57.573 42.857 1.27 0.00 0.00 4.02
6559 9351 4.457949 TCTTTTTAAAAGATCAGCCGGGTC 59.542 41.667 15.24 0.00 0.00 4.46
6560 9352 4.403734 TCTTTTTAAAAGATCAGCCGGGT 58.596 39.130 15.24 0.00 0.00 5.28
6561 9353 5.582689 ATCTTTTTAAAAGATCAGCCGGG 57.417 39.130 22.74 0.00 31.78 5.73
6569 9361 7.979444 TCACCGACTGATCTTTTTAAAAGAT 57.021 32.000 26.87 26.87 39.53 2.40
6570 9362 7.517734 CGTTCACCGACTGATCTTTTTAAAAGA 60.518 37.037 20.42 20.42 39.56 2.52
6571 9363 6.573725 CGTTCACCGACTGATCTTTTTAAAAG 59.426 38.462 10.89 10.89 39.56 2.27
6572 9364 6.423862 CGTTCACCGACTGATCTTTTTAAAA 58.576 36.000 0.00 0.00 39.56 1.52
6573 9365 5.559417 GCGTTCACCGACTGATCTTTTTAAA 60.559 40.000 0.00 0.00 39.56 1.52
6574 9366 4.084223 GCGTTCACCGACTGATCTTTTTAA 60.084 41.667 0.00 0.00 39.56 1.52
6575 9367 3.430895 GCGTTCACCGACTGATCTTTTTA 59.569 43.478 0.00 0.00 39.56 1.52
6576 9368 2.223377 GCGTTCACCGACTGATCTTTTT 59.777 45.455 0.00 0.00 39.56 1.94
6577 9369 1.798813 GCGTTCACCGACTGATCTTTT 59.201 47.619 0.00 0.00 39.56 2.27
6578 9370 1.429463 GCGTTCACCGACTGATCTTT 58.571 50.000 0.00 0.00 39.56 2.52
6579 9371 0.732880 CGCGTTCACCGACTGATCTT 60.733 55.000 0.00 0.00 39.56 2.40
6580 9372 1.154016 CGCGTTCACCGACTGATCT 60.154 57.895 0.00 0.00 39.56 2.75
6581 9373 0.179181 TACGCGTTCACCGACTGATC 60.179 55.000 20.78 0.00 39.56 2.92
6582 9374 0.179171 CTACGCGTTCACCGACTGAT 60.179 55.000 20.78 0.00 39.56 2.90
6583 9375 1.208358 CTACGCGTTCACCGACTGA 59.792 57.895 20.78 0.00 39.56 3.41
6584 9376 2.434134 GCTACGCGTTCACCGACTG 61.434 63.158 20.78 0.00 39.56 3.51
6585 9377 2.126580 GCTACGCGTTCACCGACT 60.127 61.111 20.78 0.00 39.56 4.18
6586 9378 2.429571 TGCTACGCGTTCACCGAC 60.430 61.111 20.78 0.00 39.56 4.79
6587 9379 2.429571 GTGCTACGCGTTCACCGA 60.430 61.111 20.78 0.00 39.56 4.69
6588 9380 3.823421 CGTGCTACGCGTTCACCG 61.823 66.667 27.17 20.91 33.65 4.94
6597 9389 2.063266 TGTTTTTAGGAGCGTGCTACG 58.937 47.619 0.00 4.61 45.88 3.51
6598 9390 4.680171 ATTGTTTTTAGGAGCGTGCTAC 57.320 40.909 0.00 0.00 0.00 3.58
6599 9391 6.110033 TGATATTGTTTTTAGGAGCGTGCTA 58.890 36.000 0.00 0.00 0.00 3.49
6600 9392 4.941263 TGATATTGTTTTTAGGAGCGTGCT 59.059 37.500 0.00 0.00 0.00 4.40
6601 9393 5.229921 TGATATTGTTTTTAGGAGCGTGC 57.770 39.130 0.00 0.00 0.00 5.34
6602 9394 6.692681 CCAATGATATTGTTTTTAGGAGCGTG 59.307 38.462 0.00 0.00 0.00 5.34
6603 9395 6.183360 CCCAATGATATTGTTTTTAGGAGCGT 60.183 38.462 0.00 0.00 0.00 5.07
6604 9396 6.208644 CCCAATGATATTGTTTTTAGGAGCG 58.791 40.000 0.00 0.00 0.00 5.03
6605 9397 6.515832 CCCCAATGATATTGTTTTTAGGAGC 58.484 40.000 0.00 0.00 0.00 4.70
6606 9398 6.515832 GCCCCAATGATATTGTTTTTAGGAG 58.484 40.000 0.00 0.00 0.00 3.69
6607 9399 5.068460 CGCCCCAATGATATTGTTTTTAGGA 59.932 40.000 0.00 0.00 0.00 2.94
6608 9400 5.163457 ACGCCCCAATGATATTGTTTTTAGG 60.163 40.000 0.00 0.00 0.00 2.69
6609 9401 5.901552 ACGCCCCAATGATATTGTTTTTAG 58.098 37.500 0.00 0.00 0.00 1.85
6610 9402 5.923733 ACGCCCCAATGATATTGTTTTTA 57.076 34.783 0.00 0.00 0.00 1.52
6611 9403 4.817318 ACGCCCCAATGATATTGTTTTT 57.183 36.364 0.00 0.00 0.00 1.94
6612 9404 5.596361 TGATACGCCCCAATGATATTGTTTT 59.404 36.000 0.00 0.00 0.00 2.43
6613 9405 5.136828 TGATACGCCCCAATGATATTGTTT 58.863 37.500 0.00 0.00 0.00 2.83
6614 9406 4.724399 TGATACGCCCCAATGATATTGTT 58.276 39.130 0.00 0.00 0.00 2.83
6615 9407 4.365514 TGATACGCCCCAATGATATTGT 57.634 40.909 0.00 0.00 0.00 2.71
6616 9408 5.393352 CCAATGATACGCCCCAATGATATTG 60.393 44.000 0.00 0.00 0.00 1.90
6617 9409 4.706476 CCAATGATACGCCCCAATGATATT 59.294 41.667 0.00 0.00 0.00 1.28
6618 9410 4.018506 TCCAATGATACGCCCCAATGATAT 60.019 41.667 0.00 0.00 0.00 1.63
6619 9411 3.329225 TCCAATGATACGCCCCAATGATA 59.671 43.478 0.00 0.00 0.00 2.15
6620 9412 2.108075 TCCAATGATACGCCCCAATGAT 59.892 45.455 0.00 0.00 0.00 2.45
6621 9413 1.492599 TCCAATGATACGCCCCAATGA 59.507 47.619 0.00 0.00 0.00 2.57
6622 9414 1.979855 TCCAATGATACGCCCCAATG 58.020 50.000 0.00 0.00 0.00 2.82
6623 9415 2.693074 GTTTCCAATGATACGCCCCAAT 59.307 45.455 0.00 0.00 0.00 3.16
6624 9416 2.096248 GTTTCCAATGATACGCCCCAA 58.904 47.619 0.00 0.00 0.00 4.12
6625 9417 1.283613 AGTTTCCAATGATACGCCCCA 59.716 47.619 0.00 0.00 0.00 4.96
6626 9418 2.052782 AGTTTCCAATGATACGCCCC 57.947 50.000 0.00 0.00 0.00 5.80
6627 9419 3.537580 TGTAGTTTCCAATGATACGCCC 58.462 45.455 0.00 0.00 0.00 6.13
6628 9420 5.751243 AATGTAGTTTCCAATGATACGCC 57.249 39.130 0.00 0.00 0.00 5.68
6685 9477 2.125912 AGCGTCGCCACATCTCAC 60.126 61.111 14.86 0.00 0.00 3.51
6686 9478 2.125952 CAGCGTCGCCACATCTCA 60.126 61.111 14.86 0.00 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.