Multiple sequence alignment - TraesCS5D01G151100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G151100 chr5D 100.000 4246 0 0 1 4246 240496919 240501164 0.000000e+00 7841.0
1 TraesCS5D01G151100 chr5A 92.850 2881 140 32 486 3322 313319478 313316620 0.000000e+00 4119.0
2 TraesCS5D01G151100 chr5A 92.416 923 43 14 3335 4243 313316642 313315733 0.000000e+00 1291.0
3 TraesCS5D01G151100 chr5A 89.815 216 19 3 249 461 313698653 313698438 1.500000e-69 274.0
4 TraesCS5D01G151100 chr5B 96.159 2473 67 11 1394 3840 263229444 263226974 0.000000e+00 4015.0
5 TraesCS5D01G151100 chr5B 89.399 915 75 16 486 1387 263230618 263229713 0.000000e+00 1133.0
6 TraesCS5D01G151100 chr5B 91.000 400 21 5 3853 4244 263226733 263226341 3.760000e-145 525.0
7 TraesCS5D01G151100 chr7D 80.870 230 39 4 486 710 131784150 131783921 4.360000e-40 176.0
8 TraesCS5D01G151100 chr7A 89.247 93 9 1 486 577 130606919 130606827 9.650000e-22 115.0
9 TraesCS5D01G151100 chr6D 75.304 247 36 9 487 710 332790496 332790740 1.260000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G151100 chr5D 240496919 240501164 4245 False 7841 7841 100.000 1 4246 1 chr5D.!!$F1 4245
1 TraesCS5D01G151100 chr5A 313315733 313319478 3745 True 2705 4119 92.633 486 4243 2 chr5A.!!$R2 3757
2 TraesCS5D01G151100 chr5B 263226341 263230618 4277 True 1891 4015 92.186 486 4244 3 chr5B.!!$R1 3758

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
773 780 0.102844 TCGAACAAAACGTCCCGAGT 59.897 50.0 0.00 0.0 31.62 4.18 F
1243 1265 0.172803 CCACCGGGAACTTCTAGTCG 59.827 60.0 6.32 0.0 35.59 4.18 F
2926 3227 0.735978 TACTCATGCTGACGTTGGCG 60.736 55.0 8.68 0.0 44.93 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2007 2308 0.601576 TGGTTGTCAATCCGGACGTG 60.602 55.0 6.12 8.72 40.72 4.49 R
2960 3261 0.832135 ACTGGGGACAAGCTCTCGAA 60.832 55.0 0.00 0.00 42.06 3.71 R
3997 4574 0.108585 TGTCCTGTTGCCTCCTCAAC 59.891 55.0 0.14 0.14 44.80 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 7.286215 ACTAATATAGTGTAGATGTTGGCGT 57.714 36.000 0.00 0.00 37.69 5.68
49 50 7.145985 ACTAATATAGTGTAGATGTTGGCGTG 58.854 38.462 0.00 0.00 37.69 5.34
50 51 2.665649 TAGTGTAGATGTTGGCGTGG 57.334 50.000 0.00 0.00 0.00 4.94
51 52 0.973632 AGTGTAGATGTTGGCGTGGA 59.026 50.000 0.00 0.00 0.00 4.02
52 53 1.555075 AGTGTAGATGTTGGCGTGGAT 59.445 47.619 0.00 0.00 0.00 3.41
53 54 1.933853 GTGTAGATGTTGGCGTGGATC 59.066 52.381 0.00 0.00 0.00 3.36
54 55 1.831106 TGTAGATGTTGGCGTGGATCT 59.169 47.619 0.00 0.00 0.00 2.75
55 56 2.205074 GTAGATGTTGGCGTGGATCTG 58.795 52.381 0.00 0.00 0.00 2.90
56 57 0.107508 AGATGTTGGCGTGGATCTGG 60.108 55.000 0.00 0.00 0.00 3.86
57 58 1.718757 GATGTTGGCGTGGATCTGGC 61.719 60.000 0.00 0.00 0.00 4.85
65 66 3.403624 TGGATCTGGCCACTCCAC 58.596 61.111 22.94 5.64 40.72 4.02
66 67 2.300967 TGGATCTGGCCACTCCACC 61.301 63.158 22.94 13.38 40.72 4.61
67 68 1.997874 GGATCTGGCCACTCCACCT 60.998 63.158 20.31 0.00 40.72 4.00
68 69 1.524482 GATCTGGCCACTCCACCTC 59.476 63.158 0.00 0.00 40.72 3.85
69 70 2.303549 GATCTGGCCACTCCACCTCG 62.304 65.000 0.00 0.00 40.72 4.63
70 71 4.767255 CTGGCCACTCCACCTCGC 62.767 72.222 0.00 0.00 40.72 5.03
72 73 4.101448 GGCCACTCCACCTCGCAT 62.101 66.667 0.00 0.00 34.01 4.73
73 74 2.512515 GCCACTCCACCTCGCATC 60.513 66.667 0.00 0.00 0.00 3.91
74 75 3.023949 GCCACTCCACCTCGCATCT 62.024 63.158 0.00 0.00 0.00 2.90
75 76 1.599047 CCACTCCACCTCGCATCTT 59.401 57.895 0.00 0.00 0.00 2.40
76 77 0.460987 CCACTCCACCTCGCATCTTC 60.461 60.000 0.00 0.00 0.00 2.87
77 78 0.534412 CACTCCACCTCGCATCTTCT 59.466 55.000 0.00 0.00 0.00 2.85
78 79 1.751351 CACTCCACCTCGCATCTTCTA 59.249 52.381 0.00 0.00 0.00 2.10
79 80 2.363680 CACTCCACCTCGCATCTTCTAT 59.636 50.000 0.00 0.00 0.00 1.98
80 81 3.034635 ACTCCACCTCGCATCTTCTATT 58.965 45.455 0.00 0.00 0.00 1.73
81 82 3.068873 ACTCCACCTCGCATCTTCTATTC 59.931 47.826 0.00 0.00 0.00 1.75
82 83 3.031013 TCCACCTCGCATCTTCTATTCA 58.969 45.455 0.00 0.00 0.00 2.57
83 84 3.643320 TCCACCTCGCATCTTCTATTCAT 59.357 43.478 0.00 0.00 0.00 2.57
84 85 3.993081 CCACCTCGCATCTTCTATTCATC 59.007 47.826 0.00 0.00 0.00 2.92
85 86 3.993081 CACCTCGCATCTTCTATTCATCC 59.007 47.826 0.00 0.00 0.00 3.51
86 87 3.007398 ACCTCGCATCTTCTATTCATCCC 59.993 47.826 0.00 0.00 0.00 3.85
87 88 3.594134 CTCGCATCTTCTATTCATCCCC 58.406 50.000 0.00 0.00 0.00 4.81
88 89 2.972021 TCGCATCTTCTATTCATCCCCA 59.028 45.455 0.00 0.00 0.00 4.96
89 90 3.584406 TCGCATCTTCTATTCATCCCCAT 59.416 43.478 0.00 0.00 0.00 4.00
90 91 3.937706 CGCATCTTCTATTCATCCCCATC 59.062 47.826 0.00 0.00 0.00 3.51
91 92 4.564199 CGCATCTTCTATTCATCCCCATCA 60.564 45.833 0.00 0.00 0.00 3.07
92 93 5.507637 GCATCTTCTATTCATCCCCATCAT 58.492 41.667 0.00 0.00 0.00 2.45
93 94 5.950549 GCATCTTCTATTCATCCCCATCATT 59.049 40.000 0.00 0.00 0.00 2.57
94 95 6.436532 GCATCTTCTATTCATCCCCATCATTT 59.563 38.462 0.00 0.00 0.00 2.32
95 96 7.577046 GCATCTTCTATTCATCCCCATCATTTG 60.577 40.741 0.00 0.00 0.00 2.32
96 97 6.914665 TCTTCTATTCATCCCCATCATTTGT 58.085 36.000 0.00 0.00 0.00 2.83
97 98 6.774170 TCTTCTATTCATCCCCATCATTTGTG 59.226 38.462 0.00 0.00 0.00 3.33
98 99 6.264771 TCTATTCATCCCCATCATTTGTGA 57.735 37.500 0.00 0.00 0.00 3.58
99 100 6.671605 TCTATTCATCCCCATCATTTGTGAA 58.328 36.000 0.00 0.00 0.00 3.18
100 101 7.299896 TCTATTCATCCCCATCATTTGTGAAT 58.700 34.615 0.00 0.00 38.14 2.57
101 102 5.857471 TTCATCCCCATCATTTGTGAATC 57.143 39.130 0.00 0.00 0.00 2.52
102 103 4.869451 TCATCCCCATCATTTGTGAATCA 58.131 39.130 0.00 0.00 0.00 2.57
103 104 5.460416 TCATCCCCATCATTTGTGAATCAT 58.540 37.500 0.00 0.00 0.00 2.45
104 105 5.900699 TCATCCCCATCATTTGTGAATCATT 59.099 36.000 0.00 0.00 0.00 2.57
105 106 7.068061 TCATCCCCATCATTTGTGAATCATTA 58.932 34.615 0.00 0.00 0.00 1.90
106 107 6.964807 TCCCCATCATTTGTGAATCATTAG 57.035 37.500 0.00 0.00 0.00 1.73
107 108 6.671605 TCCCCATCATTTGTGAATCATTAGA 58.328 36.000 0.00 0.00 0.00 2.10
108 109 7.124721 TCCCCATCATTTGTGAATCATTAGAA 58.875 34.615 0.00 0.00 0.00 2.10
109 110 7.785985 TCCCCATCATTTGTGAATCATTAGAAT 59.214 33.333 0.00 0.00 0.00 2.40
110 111 8.426489 CCCCATCATTTGTGAATCATTAGAATT 58.574 33.333 0.00 0.00 0.00 2.17
111 112 9.826574 CCCATCATTTGTGAATCATTAGAATTT 57.173 29.630 0.00 0.00 0.00 1.82
116 117 9.865321 CATTTGTGAATCATTAGAATTTCCAGT 57.135 29.630 0.00 0.00 0.00 4.00
117 118 9.865321 ATTTGTGAATCATTAGAATTTCCAGTG 57.135 29.630 0.00 0.00 0.00 3.66
118 119 8.634335 TTGTGAATCATTAGAATTTCCAGTGA 57.366 30.769 0.00 0.00 0.00 3.41
119 120 8.812513 TGTGAATCATTAGAATTTCCAGTGAT 57.187 30.769 0.00 0.00 0.00 3.06
120 121 9.904198 TGTGAATCATTAGAATTTCCAGTGATA 57.096 29.630 3.90 0.00 0.00 2.15
122 123 9.904198 TGAATCATTAGAATTTCCAGTGATACA 57.096 29.630 3.90 0.00 0.00 2.29
124 125 9.685276 AATCATTAGAATTTCCAGTGATACACA 57.315 29.630 3.90 0.00 36.74 3.72
125 126 9.685276 ATCATTAGAATTTCCAGTGATACACAA 57.315 29.630 1.93 0.00 36.74 3.33
126 127 9.685276 TCATTAGAATTTCCAGTGATACACAAT 57.315 29.630 4.75 0.00 36.74 2.71
127 128 9.726232 CATTAGAATTTCCAGTGATACACAATG 57.274 33.333 4.75 0.00 43.11 2.82
135 136 5.878332 CAGTGATACACAATGGTTAGCAA 57.122 39.130 4.75 0.00 40.33 3.91
136 137 5.872635 CAGTGATACACAATGGTTAGCAAG 58.127 41.667 4.75 0.00 40.33 4.01
137 138 4.943705 AGTGATACACAATGGTTAGCAAGG 59.056 41.667 4.75 0.00 36.74 3.61
138 139 4.700213 GTGATACACAATGGTTAGCAAGGT 59.300 41.667 0.00 0.00 34.08 3.50
139 140 4.699735 TGATACACAATGGTTAGCAAGGTG 59.300 41.667 14.22 14.22 0.00 4.00
140 141 3.222173 ACACAATGGTTAGCAAGGTGA 57.778 42.857 20.01 0.00 0.00 4.02
141 142 3.561143 ACACAATGGTTAGCAAGGTGAA 58.439 40.909 20.01 0.00 0.00 3.18
142 143 3.569701 ACACAATGGTTAGCAAGGTGAAG 59.430 43.478 20.01 7.07 0.00 3.02
143 144 3.820467 CACAATGGTTAGCAAGGTGAAGA 59.180 43.478 11.55 0.00 0.00 2.87
144 145 4.074970 ACAATGGTTAGCAAGGTGAAGAG 58.925 43.478 0.00 0.00 0.00 2.85
145 146 2.185004 TGGTTAGCAAGGTGAAGAGC 57.815 50.000 0.00 0.00 0.00 4.09
146 147 1.419762 TGGTTAGCAAGGTGAAGAGCA 59.580 47.619 0.00 0.00 0.00 4.26
147 148 2.040278 TGGTTAGCAAGGTGAAGAGCAT 59.960 45.455 0.00 0.00 0.00 3.79
148 149 2.421424 GGTTAGCAAGGTGAAGAGCATG 59.579 50.000 0.00 0.00 0.00 4.06
149 150 2.408271 TAGCAAGGTGAAGAGCATGG 57.592 50.000 0.00 0.00 0.00 3.66
150 151 0.964358 AGCAAGGTGAAGAGCATGGC 60.964 55.000 0.00 0.00 0.00 4.40
151 152 1.246056 GCAAGGTGAAGAGCATGGCA 61.246 55.000 0.00 0.00 0.00 4.92
152 153 1.471119 CAAGGTGAAGAGCATGGCAT 58.529 50.000 0.00 0.00 0.00 4.40
153 154 1.134367 CAAGGTGAAGAGCATGGCATG 59.866 52.381 22.99 22.99 0.00 4.06
162 163 3.607163 CATGGCATGCCGTTCCTT 58.393 55.556 29.21 7.46 39.42 3.36
163 164 2.792500 CATGGCATGCCGTTCCTTA 58.208 52.632 29.21 11.18 39.42 2.69
164 165 1.102154 CATGGCATGCCGTTCCTTAA 58.898 50.000 29.21 10.36 39.42 1.85
165 166 1.476085 CATGGCATGCCGTTCCTTAAA 59.524 47.619 29.21 9.54 39.42 1.52
166 167 1.846007 TGGCATGCCGTTCCTTAAAT 58.154 45.000 30.87 0.00 39.42 1.40
167 168 2.175202 TGGCATGCCGTTCCTTAAATT 58.825 42.857 30.87 0.00 39.42 1.82
168 169 2.564947 TGGCATGCCGTTCCTTAAATTT 59.435 40.909 30.87 0.00 39.42 1.82
169 170 3.007398 TGGCATGCCGTTCCTTAAATTTT 59.993 39.130 30.87 0.00 39.42 1.82
170 171 3.370672 GGCATGCCGTTCCTTAAATTTTG 59.629 43.478 23.48 0.00 0.00 2.44
171 172 3.370672 GCATGCCGTTCCTTAAATTTTGG 59.629 43.478 6.36 0.00 0.00 3.28
172 173 4.565022 CATGCCGTTCCTTAAATTTTGGT 58.435 39.130 0.00 0.00 0.00 3.67
173 174 3.983741 TGCCGTTCCTTAAATTTTGGTG 58.016 40.909 0.00 0.00 0.00 4.17
174 175 2.734606 GCCGTTCCTTAAATTTTGGTGC 59.265 45.455 0.00 0.00 0.00 5.01
175 176 3.800604 GCCGTTCCTTAAATTTTGGTGCA 60.801 43.478 0.00 0.00 0.00 4.57
176 177 3.987220 CCGTTCCTTAAATTTTGGTGCAG 59.013 43.478 0.00 0.00 0.00 4.41
177 178 4.500716 CCGTTCCTTAAATTTTGGTGCAGT 60.501 41.667 0.00 0.00 0.00 4.40
178 179 5.047188 CGTTCCTTAAATTTTGGTGCAGTT 58.953 37.500 0.00 0.00 0.00 3.16
179 180 5.051106 CGTTCCTTAAATTTTGGTGCAGTTG 60.051 40.000 0.00 0.00 0.00 3.16
180 181 4.954875 TCCTTAAATTTTGGTGCAGTTGG 58.045 39.130 0.00 0.00 0.00 3.77
181 182 4.651503 TCCTTAAATTTTGGTGCAGTTGGA 59.348 37.500 0.00 0.00 0.00 3.53
182 183 5.129485 TCCTTAAATTTTGGTGCAGTTGGAA 59.871 36.000 0.00 0.00 0.00 3.53
183 184 5.466393 CCTTAAATTTTGGTGCAGTTGGAAG 59.534 40.000 0.00 0.00 0.00 3.46
184 185 4.486125 AAATTTTGGTGCAGTTGGAAGT 57.514 36.364 0.00 0.00 0.00 3.01
185 186 4.486125 AATTTTGGTGCAGTTGGAAGTT 57.514 36.364 0.00 0.00 0.00 2.66
186 187 3.971245 TTTTGGTGCAGTTGGAAGTTT 57.029 38.095 0.00 0.00 0.00 2.66
187 188 5.606348 ATTTTGGTGCAGTTGGAAGTTTA 57.394 34.783 0.00 0.00 0.00 2.01
188 189 5.606348 TTTTGGTGCAGTTGGAAGTTTAT 57.394 34.783 0.00 0.00 0.00 1.40
189 190 4.846779 TTGGTGCAGTTGGAAGTTTATC 57.153 40.909 0.00 0.00 0.00 1.75
190 191 3.826524 TGGTGCAGTTGGAAGTTTATCA 58.173 40.909 0.00 0.00 0.00 2.15
191 192 3.568007 TGGTGCAGTTGGAAGTTTATCAC 59.432 43.478 0.00 0.00 0.00 3.06
192 193 3.057526 GGTGCAGTTGGAAGTTTATCACC 60.058 47.826 0.00 0.00 35.33 4.02
193 194 3.568007 GTGCAGTTGGAAGTTTATCACCA 59.432 43.478 0.00 0.00 0.00 4.17
194 195 4.218417 GTGCAGTTGGAAGTTTATCACCAT 59.782 41.667 0.00 0.00 32.31 3.55
195 196 4.832266 TGCAGTTGGAAGTTTATCACCATT 59.168 37.500 0.00 0.00 32.31 3.16
196 197 5.048083 TGCAGTTGGAAGTTTATCACCATTC 60.048 40.000 0.00 0.00 32.31 2.67
197 198 5.622233 GCAGTTGGAAGTTTATCACCATTCC 60.622 44.000 0.00 0.00 39.90 3.01
198 199 5.476599 CAGTTGGAAGTTTATCACCATTCCA 59.523 40.000 0.95 0.95 45.77 3.53
199 200 6.153340 CAGTTGGAAGTTTATCACCATTCCAT 59.847 38.462 5.85 0.00 46.44 3.41
200 201 6.725834 AGTTGGAAGTTTATCACCATTCCATT 59.274 34.615 5.85 0.00 46.44 3.16
201 202 6.773976 TGGAAGTTTATCACCATTCCATTC 57.226 37.500 0.95 0.00 43.34 2.67
202 203 6.493166 TGGAAGTTTATCACCATTCCATTCT 58.507 36.000 0.95 0.00 43.34 2.40
203 204 6.953520 TGGAAGTTTATCACCATTCCATTCTT 59.046 34.615 0.95 0.00 43.34 2.52
204 205 7.454380 TGGAAGTTTATCACCATTCCATTCTTT 59.546 33.333 0.95 0.00 43.34 2.52
205 206 8.314021 GGAAGTTTATCACCATTCCATTCTTTT 58.686 33.333 0.00 0.00 39.39 2.27
206 207 9.710900 GAAGTTTATCACCATTCCATTCTTTTT 57.289 29.630 0.00 0.00 0.00 1.94
228 229 8.835467 TTTTTGTTGATATTAGCGCACTATTC 57.165 30.769 11.47 0.99 0.00 1.75
229 230 7.786178 TTTGTTGATATTAGCGCACTATTCT 57.214 32.000 11.47 0.00 0.00 2.40
230 231 7.786178 TTGTTGATATTAGCGCACTATTCTT 57.214 32.000 11.47 0.00 0.00 2.52
231 232 7.408132 TGTTGATATTAGCGCACTATTCTTC 57.592 36.000 11.47 0.00 0.00 2.87
232 233 7.210174 TGTTGATATTAGCGCACTATTCTTCT 58.790 34.615 11.47 0.00 0.00 2.85
233 234 8.357402 TGTTGATATTAGCGCACTATTCTTCTA 58.643 33.333 11.47 0.00 0.00 2.10
234 235 8.855279 GTTGATATTAGCGCACTATTCTTCTAG 58.145 37.037 11.47 0.00 0.00 2.43
235 236 8.112016 TGATATTAGCGCACTATTCTTCTAGT 57.888 34.615 11.47 0.00 32.10 2.57
236 237 9.227777 TGATATTAGCGCACTATTCTTCTAGTA 57.772 33.333 11.47 0.00 30.78 1.82
239 240 4.551388 AGCGCACTATTCTTCTAGTATGC 58.449 43.478 11.47 0.00 34.07 3.14
240 241 3.675698 GCGCACTATTCTTCTAGTATGCC 59.324 47.826 0.30 0.00 30.78 4.40
241 242 4.238514 CGCACTATTCTTCTAGTATGCCC 58.761 47.826 0.00 0.00 30.78 5.36
242 243 4.262036 CGCACTATTCTTCTAGTATGCCCA 60.262 45.833 0.00 0.00 30.78 5.36
243 244 5.611374 GCACTATTCTTCTAGTATGCCCAA 58.389 41.667 0.00 0.00 30.78 4.12
244 245 6.234177 GCACTATTCTTCTAGTATGCCCAAT 58.766 40.000 0.00 0.00 30.78 3.16
245 246 6.148480 GCACTATTCTTCTAGTATGCCCAATG 59.852 42.308 0.00 0.00 30.78 2.82
246 247 7.220030 CACTATTCTTCTAGTATGCCCAATGT 58.780 38.462 0.00 0.00 30.78 2.71
247 248 7.716998 CACTATTCTTCTAGTATGCCCAATGTT 59.283 37.037 0.00 0.00 30.78 2.71
248 249 6.949352 ATTCTTCTAGTATGCCCAATGTTG 57.051 37.500 0.00 0.00 0.00 3.33
249 250 5.692115 TCTTCTAGTATGCCCAATGTTGA 57.308 39.130 0.00 0.00 0.00 3.18
250 251 6.061022 TCTTCTAGTATGCCCAATGTTGAA 57.939 37.500 0.00 0.00 0.00 2.69
251 252 6.480763 TCTTCTAGTATGCCCAATGTTGAAA 58.519 36.000 0.00 0.00 0.00 2.69
252 253 6.945435 TCTTCTAGTATGCCCAATGTTGAAAA 59.055 34.615 0.00 0.00 0.00 2.29
253 254 6.757897 TCTAGTATGCCCAATGTTGAAAAG 57.242 37.500 0.00 0.00 0.00 2.27
254 255 6.480763 TCTAGTATGCCCAATGTTGAAAAGA 58.519 36.000 0.00 0.00 0.00 2.52
255 256 7.118723 TCTAGTATGCCCAATGTTGAAAAGAT 58.881 34.615 0.00 0.00 0.00 2.40
256 257 6.610075 AGTATGCCCAATGTTGAAAAGATT 57.390 33.333 0.00 0.00 40.86 2.40
257 258 7.008021 AGTATGCCCAATGTTGAAAAGATTT 57.992 32.000 0.00 0.00 37.76 2.17
258 259 7.452562 AGTATGCCCAATGTTGAAAAGATTTT 58.547 30.769 0.00 0.00 37.76 1.82
259 260 8.592809 AGTATGCCCAATGTTGAAAAGATTTTA 58.407 29.630 0.00 0.00 37.76 1.52
260 261 7.910441 ATGCCCAATGTTGAAAAGATTTTAG 57.090 32.000 0.00 0.00 37.76 1.85
261 262 5.700373 TGCCCAATGTTGAAAAGATTTTAGC 59.300 36.000 0.00 0.00 37.76 3.09
262 263 5.700373 GCCCAATGTTGAAAAGATTTTAGCA 59.300 36.000 0.00 0.00 37.76 3.49
263 264 6.204495 GCCCAATGTTGAAAAGATTTTAGCAA 59.796 34.615 0.00 0.00 37.76 3.91
264 265 7.575365 CCCAATGTTGAAAAGATTTTAGCAAC 58.425 34.615 12.30 12.30 37.76 4.17
265 266 7.442062 CCCAATGTTGAAAAGATTTTAGCAACT 59.558 33.333 16.83 6.52 37.76 3.16
266 267 8.829612 CCAATGTTGAAAAGATTTTAGCAACTT 58.170 29.630 16.83 11.40 37.76 2.66
267 268 9.640974 CAATGTTGAAAAGATTTTAGCAACTTG 57.359 29.630 16.83 14.70 37.76 3.16
268 269 7.769272 TGTTGAAAAGATTTTAGCAACTTGG 57.231 32.000 16.83 0.00 36.57 3.61
269 270 6.760770 TGTTGAAAAGATTTTAGCAACTTGGG 59.239 34.615 16.83 0.00 36.57 4.12
270 271 6.478512 TGAAAAGATTTTAGCAACTTGGGT 57.521 33.333 0.00 0.00 0.00 4.51
271 272 6.512297 TGAAAAGATTTTAGCAACTTGGGTC 58.488 36.000 0.00 0.00 0.00 4.46
272 273 6.323739 TGAAAAGATTTTAGCAACTTGGGTCT 59.676 34.615 0.00 0.00 0.00 3.85
273 274 6.731292 AAAGATTTTAGCAACTTGGGTCTT 57.269 33.333 0.00 0.00 0.00 3.01
274 275 5.966742 AGATTTTAGCAACTTGGGTCTTC 57.033 39.130 0.00 0.00 0.00 2.87
275 276 5.635120 AGATTTTAGCAACTTGGGTCTTCT 58.365 37.500 0.00 0.00 0.00 2.85
276 277 6.071320 AGATTTTAGCAACTTGGGTCTTCTT 58.929 36.000 0.00 0.00 0.00 2.52
277 278 5.767816 TTTTAGCAACTTGGGTCTTCTTC 57.232 39.130 0.00 0.00 0.00 2.87
278 279 4.706842 TTAGCAACTTGGGTCTTCTTCT 57.293 40.909 0.00 0.00 0.00 2.85
279 280 5.818678 TTAGCAACTTGGGTCTTCTTCTA 57.181 39.130 0.00 0.00 0.00 2.10
280 281 4.009370 AGCAACTTGGGTCTTCTTCTAC 57.991 45.455 0.00 0.00 0.00 2.59
281 282 3.391296 AGCAACTTGGGTCTTCTTCTACA 59.609 43.478 0.00 0.00 0.00 2.74
282 283 4.134563 GCAACTTGGGTCTTCTTCTACAA 58.865 43.478 0.00 0.00 0.00 2.41
283 284 4.214332 GCAACTTGGGTCTTCTTCTACAAG 59.786 45.833 0.00 0.00 40.66 3.16
285 286 5.632034 ACTTGGGTCTTCTTCTACAAGTT 57.368 39.130 0.00 0.00 44.10 2.66
286 287 6.742559 ACTTGGGTCTTCTTCTACAAGTTA 57.257 37.500 0.00 0.00 44.10 2.24
287 288 6.760291 ACTTGGGTCTTCTTCTACAAGTTAG 58.240 40.000 0.00 0.00 44.10 2.34
288 289 6.553852 ACTTGGGTCTTCTTCTACAAGTTAGA 59.446 38.462 0.00 0.00 44.10 2.10
289 290 7.235812 ACTTGGGTCTTCTTCTACAAGTTAGAT 59.764 37.037 0.00 0.00 44.10 1.98
290 291 7.554959 TGGGTCTTCTTCTACAAGTTAGATT 57.445 36.000 0.00 0.00 0.00 2.40
291 292 8.660295 TGGGTCTTCTTCTACAAGTTAGATTA 57.340 34.615 0.00 0.00 0.00 1.75
292 293 9.268282 TGGGTCTTCTTCTACAAGTTAGATTAT 57.732 33.333 0.00 0.00 0.00 1.28
293 294 9.535878 GGGTCTTCTTCTACAAGTTAGATTATG 57.464 37.037 0.00 0.00 0.00 1.90
312 313 9.857656 AGATTATGAATAATTGAGTGTGTGGAT 57.142 29.630 0.00 0.00 33.37 3.41
315 316 7.943079 ATGAATAATTGAGTGTGTGGATTCA 57.057 32.000 0.00 0.00 36.72 2.57
316 317 7.144722 TGAATAATTGAGTGTGTGGATTCAC 57.855 36.000 0.00 0.00 43.87 3.18
333 334 9.912634 GTGGATTCACATCTTAAATTTCTTTGA 57.087 29.630 0.00 0.00 43.13 2.69
341 342 6.194796 TCTTAAATTTCTTTGAGATGGCGG 57.805 37.500 0.00 0.00 33.46 6.13
342 343 5.710099 TCTTAAATTTCTTTGAGATGGCGGT 59.290 36.000 0.00 0.00 33.46 5.68
343 344 4.871933 AAATTTCTTTGAGATGGCGGTT 57.128 36.364 0.00 0.00 0.00 4.44
344 345 3.855689 ATTTCTTTGAGATGGCGGTTG 57.144 42.857 0.00 0.00 0.00 3.77
345 346 2.270352 TTCTTTGAGATGGCGGTTGT 57.730 45.000 0.00 0.00 0.00 3.32
346 347 2.270352 TCTTTGAGATGGCGGTTGTT 57.730 45.000 0.00 0.00 0.00 2.83
347 348 2.582052 TCTTTGAGATGGCGGTTGTTT 58.418 42.857 0.00 0.00 0.00 2.83
348 349 2.552315 TCTTTGAGATGGCGGTTGTTTC 59.448 45.455 0.00 0.00 0.00 2.78
349 350 1.974265 TTGAGATGGCGGTTGTTTCA 58.026 45.000 0.00 0.00 0.00 2.69
350 351 1.974265 TGAGATGGCGGTTGTTTCAA 58.026 45.000 0.00 0.00 0.00 2.69
351 352 2.302260 TGAGATGGCGGTTGTTTCAAA 58.698 42.857 0.00 0.00 0.00 2.69
352 353 2.690497 TGAGATGGCGGTTGTTTCAAAA 59.310 40.909 0.00 0.00 0.00 2.44
353 354 3.320541 TGAGATGGCGGTTGTTTCAAAAT 59.679 39.130 0.00 0.00 0.00 1.82
354 355 3.652274 AGATGGCGGTTGTTTCAAAATG 58.348 40.909 0.00 0.00 0.00 2.32
355 356 1.576356 TGGCGGTTGTTTCAAAATGC 58.424 45.000 0.00 0.00 0.00 3.56
356 357 1.137872 TGGCGGTTGTTTCAAAATGCT 59.862 42.857 0.00 0.00 0.00 3.79
357 358 2.362397 TGGCGGTTGTTTCAAAATGCTA 59.638 40.909 0.00 0.00 0.00 3.49
358 359 3.181475 TGGCGGTTGTTTCAAAATGCTAA 60.181 39.130 0.00 0.00 0.00 3.09
359 360 3.183574 GGCGGTTGTTTCAAAATGCTAAC 59.816 43.478 0.00 0.00 0.00 2.34
360 361 3.799420 GCGGTTGTTTCAAAATGCTAACA 59.201 39.130 0.00 0.00 0.00 2.41
361 362 4.268884 GCGGTTGTTTCAAAATGCTAACAA 59.731 37.500 0.00 0.00 37.95 2.83
362 363 5.556194 GCGGTTGTTTCAAAATGCTAACAAG 60.556 40.000 0.00 0.00 40.10 3.16
363 364 5.746245 CGGTTGTTTCAAAATGCTAACAAGA 59.254 36.000 0.00 0.00 40.10 3.02
364 365 6.254589 CGGTTGTTTCAAAATGCTAACAAGAA 59.745 34.615 0.00 0.00 40.10 2.52
365 366 7.201478 CGGTTGTTTCAAAATGCTAACAAGAAA 60.201 33.333 0.00 0.00 40.10 2.52
366 367 8.447053 GGTTGTTTCAAAATGCTAACAAGAAAA 58.553 29.630 0.00 0.00 40.10 2.29
367 368 9.818796 GTTGTTTCAAAATGCTAACAAGAAAAA 57.181 25.926 0.00 0.00 40.10 1.94
392 393 4.564940 CATTGCTTATGCTCCCTTCTTC 57.435 45.455 1.96 0.00 40.48 2.87
393 394 3.719268 TTGCTTATGCTCCCTTCTTCA 57.281 42.857 1.96 0.00 40.48 3.02
394 395 3.939740 TGCTTATGCTCCCTTCTTCAT 57.060 42.857 1.96 0.00 40.48 2.57
395 396 3.813443 TGCTTATGCTCCCTTCTTCATC 58.187 45.455 1.96 0.00 40.48 2.92
396 397 3.457380 TGCTTATGCTCCCTTCTTCATCT 59.543 43.478 1.96 0.00 40.48 2.90
397 398 4.064388 GCTTATGCTCCCTTCTTCATCTC 58.936 47.826 0.00 0.00 36.03 2.75
398 399 4.202346 GCTTATGCTCCCTTCTTCATCTCT 60.202 45.833 0.00 0.00 36.03 3.10
399 400 5.687177 GCTTATGCTCCCTTCTTCATCTCTT 60.687 44.000 0.00 0.00 36.03 2.85
400 401 4.858965 ATGCTCCCTTCTTCATCTCTTT 57.141 40.909 0.00 0.00 0.00 2.52
401 402 4.647564 TGCTCCCTTCTTCATCTCTTTT 57.352 40.909 0.00 0.00 0.00 2.27
402 403 4.330250 TGCTCCCTTCTTCATCTCTTTTG 58.670 43.478 0.00 0.00 0.00 2.44
403 404 4.202503 TGCTCCCTTCTTCATCTCTTTTGT 60.203 41.667 0.00 0.00 0.00 2.83
404 405 5.013079 TGCTCCCTTCTTCATCTCTTTTGTA 59.987 40.000 0.00 0.00 0.00 2.41
405 406 5.940470 GCTCCCTTCTTCATCTCTTTTGTAA 59.060 40.000 0.00 0.00 0.00 2.41
406 407 6.128145 GCTCCCTTCTTCATCTCTTTTGTAAC 60.128 42.308 0.00 0.00 0.00 2.50
407 408 6.238648 TCCCTTCTTCATCTCTTTTGTAACC 58.761 40.000 0.00 0.00 0.00 2.85
408 409 5.122396 CCCTTCTTCATCTCTTTTGTAACCG 59.878 44.000 0.00 0.00 0.00 4.44
409 410 5.701290 CCTTCTTCATCTCTTTTGTAACCGT 59.299 40.000 0.00 0.00 0.00 4.83
410 411 6.204882 CCTTCTTCATCTCTTTTGTAACCGTT 59.795 38.462 0.00 0.00 0.00 4.44
411 412 6.539649 TCTTCATCTCTTTTGTAACCGTTG 57.460 37.500 0.00 0.00 0.00 4.10
412 413 6.285224 TCTTCATCTCTTTTGTAACCGTTGA 58.715 36.000 0.00 0.00 0.00 3.18
413 414 6.764085 TCTTCATCTCTTTTGTAACCGTTGAA 59.236 34.615 0.00 0.00 0.00 2.69
414 415 7.444183 TCTTCATCTCTTTTGTAACCGTTGAAT 59.556 33.333 0.00 0.00 0.00 2.57
415 416 7.129109 TCATCTCTTTTGTAACCGTTGAATC 57.871 36.000 0.00 0.00 0.00 2.52
416 417 6.708502 TCATCTCTTTTGTAACCGTTGAATCA 59.291 34.615 0.00 0.00 0.00 2.57
417 418 6.928979 TCTCTTTTGTAACCGTTGAATCAA 57.071 33.333 0.00 0.00 0.00 2.57
418 419 6.721321 TCTCTTTTGTAACCGTTGAATCAAC 58.279 36.000 15.62 15.62 40.54 3.18
429 430 4.145876 GTTGAATCAACGCAACATCTCA 57.854 40.909 10.58 0.00 42.86 3.27
430 431 4.726416 GTTGAATCAACGCAACATCTCAT 58.274 39.130 10.58 0.00 42.86 2.90
431 432 4.604843 TGAATCAACGCAACATCTCATC 57.395 40.909 0.00 0.00 0.00 2.92
432 433 4.256110 TGAATCAACGCAACATCTCATCT 58.744 39.130 0.00 0.00 0.00 2.90
433 434 4.696877 TGAATCAACGCAACATCTCATCTT 59.303 37.500 0.00 0.00 0.00 2.40
434 435 5.181811 TGAATCAACGCAACATCTCATCTTT 59.818 36.000 0.00 0.00 0.00 2.52
435 436 5.633830 ATCAACGCAACATCTCATCTTTT 57.366 34.783 0.00 0.00 0.00 2.27
436 437 6.741992 ATCAACGCAACATCTCATCTTTTA 57.258 33.333 0.00 0.00 0.00 1.52
437 438 6.169419 TCAACGCAACATCTCATCTTTTAG 57.831 37.500 0.00 0.00 0.00 1.85
438 439 5.700832 TCAACGCAACATCTCATCTTTTAGT 59.299 36.000 0.00 0.00 0.00 2.24
439 440 5.536554 ACGCAACATCTCATCTTTTAGTG 57.463 39.130 0.00 0.00 0.00 2.74
440 441 4.997395 ACGCAACATCTCATCTTTTAGTGT 59.003 37.500 0.00 0.00 0.00 3.55
441 442 6.163476 ACGCAACATCTCATCTTTTAGTGTA 58.837 36.000 0.00 0.00 0.00 2.90
442 443 6.311445 ACGCAACATCTCATCTTTTAGTGTAG 59.689 38.462 0.00 0.00 0.00 2.74
443 444 6.237942 CGCAACATCTCATCTTTTAGTGTAGG 60.238 42.308 0.00 0.00 0.00 3.18
444 445 6.037610 GCAACATCTCATCTTTTAGTGTAGGG 59.962 42.308 0.00 0.00 0.00 3.53
445 446 6.875972 ACATCTCATCTTTTAGTGTAGGGT 57.124 37.500 0.00 0.00 0.00 4.34
446 447 6.644347 ACATCTCATCTTTTAGTGTAGGGTG 58.356 40.000 0.00 0.00 0.00 4.61
447 448 5.677319 TCTCATCTTTTAGTGTAGGGTGG 57.323 43.478 0.00 0.00 0.00 4.61
448 449 4.081087 TCTCATCTTTTAGTGTAGGGTGGC 60.081 45.833 0.00 0.00 0.00 5.01
449 450 3.054655 TCATCTTTTAGTGTAGGGTGGCC 60.055 47.826 0.00 0.00 0.00 5.36
450 451 2.340731 TCTTTTAGTGTAGGGTGGCCA 58.659 47.619 0.00 0.00 0.00 5.36
451 452 2.712087 TCTTTTAGTGTAGGGTGGCCAA 59.288 45.455 7.24 0.00 0.00 4.52
452 453 2.871096 TTTAGTGTAGGGTGGCCAAG 57.129 50.000 7.24 0.00 0.00 3.61
453 454 0.988832 TTAGTGTAGGGTGGCCAAGG 59.011 55.000 7.24 0.00 0.00 3.61
454 455 0.117541 TAGTGTAGGGTGGCCAAGGA 59.882 55.000 7.24 0.00 0.00 3.36
455 456 0.550147 AGTGTAGGGTGGCCAAGGAT 60.550 55.000 7.24 0.00 0.00 3.24
456 457 0.394352 GTGTAGGGTGGCCAAGGATG 60.394 60.000 7.24 0.00 0.00 3.51
457 458 0.844661 TGTAGGGTGGCCAAGGATGT 60.845 55.000 7.24 0.00 0.00 3.06
458 459 1.209621 GTAGGGTGGCCAAGGATGTA 58.790 55.000 7.24 0.00 0.00 2.29
459 460 1.134189 GTAGGGTGGCCAAGGATGTAC 60.134 57.143 7.24 0.00 0.00 2.90
460 461 0.550147 AGGGTGGCCAAGGATGTACT 60.550 55.000 7.24 0.00 0.00 2.73
461 462 0.331616 GGGTGGCCAAGGATGTACTT 59.668 55.000 7.24 0.00 0.00 2.24
462 463 1.463674 GGTGGCCAAGGATGTACTTG 58.536 55.000 7.24 0.00 45.71 3.16
470 471 3.942829 CAAGGATGTACTTGGAGCTTCA 58.057 45.455 0.00 0.00 43.14 3.02
471 472 4.326826 CAAGGATGTACTTGGAGCTTCAA 58.673 43.478 7.36 7.36 43.14 2.69
472 473 4.640771 AGGATGTACTTGGAGCTTCAAA 57.359 40.909 9.20 0.00 0.00 2.69
473 474 4.327680 AGGATGTACTTGGAGCTTCAAAC 58.672 43.478 9.20 5.75 0.00 2.93
474 475 4.072131 GGATGTACTTGGAGCTTCAAACA 58.928 43.478 13.43 13.43 0.00 2.83
475 476 4.083271 GGATGTACTTGGAGCTTCAAACAC 60.083 45.833 13.35 11.70 0.00 3.32
476 477 3.879998 TGTACTTGGAGCTTCAAACACA 58.120 40.909 9.20 12.29 0.00 3.72
477 478 3.876914 TGTACTTGGAGCTTCAAACACAG 59.123 43.478 9.20 0.00 0.00 3.66
478 479 3.281727 ACTTGGAGCTTCAAACACAGA 57.718 42.857 9.20 0.00 0.00 3.41
479 480 3.209410 ACTTGGAGCTTCAAACACAGAG 58.791 45.455 9.20 0.00 0.00 3.35
480 481 2.260844 TGGAGCTTCAAACACAGAGG 57.739 50.000 0.00 0.00 0.00 3.69
481 482 0.877743 GGAGCTTCAAACACAGAGGC 59.122 55.000 0.00 0.00 38.26 4.70
482 483 1.597742 GAGCTTCAAACACAGAGGCA 58.402 50.000 0.00 0.00 40.19 4.75
483 484 2.157738 GAGCTTCAAACACAGAGGCAT 58.842 47.619 0.00 0.00 40.19 4.40
484 485 2.555757 GAGCTTCAAACACAGAGGCATT 59.444 45.455 0.00 0.00 40.19 3.56
494 495 2.437281 CACAGAGGCATTAGTGAGGGAT 59.563 50.000 0.00 0.00 33.99 3.85
539 541 8.443176 AGGAGGAGCAAATGAAGATATATTTGA 58.557 33.333 11.27 0.00 43.51 2.69
542 544 9.638176 AGGAGCAAATGAAGATATATTTGAAGT 57.362 29.630 11.27 0.00 43.51 3.01
597 599 0.968393 AAGAGGAGGAGGCTCGACAC 60.968 60.000 8.69 0.00 0.00 3.67
598 600 2.752238 AGGAGGAGGCTCGACACG 60.752 66.667 8.69 0.00 0.00 4.49
599 601 2.750637 GGAGGAGGCTCGACACGA 60.751 66.667 8.69 0.00 0.00 4.35
615 617 1.098712 ACGAAGAAGGCCGCACAAAA 61.099 50.000 0.00 0.00 0.00 2.44
651 656 1.289276 GCCGCCAATGCCAAATAAAG 58.711 50.000 0.00 0.00 0.00 1.85
652 657 1.938625 CCGCCAATGCCAAATAAAGG 58.061 50.000 0.00 0.00 0.00 3.11
664 670 5.467035 CCAAATAAAGGCAAAAGAGGTGA 57.533 39.130 0.00 0.00 0.00 4.02
696 702 5.598416 TCATGACTATGGACTTGACGAAT 57.402 39.130 0.00 0.00 34.97 3.34
703 709 3.536956 TGGACTTGACGAATATGTCCC 57.463 47.619 15.17 0.00 44.60 4.46
705 711 2.169769 GGACTTGACGAATATGTCCCCA 59.830 50.000 0.00 0.00 40.74 4.96
710 716 4.561500 TGACGAATATGTCCCCAAAGAA 57.438 40.909 0.00 0.00 38.11 2.52
711 717 5.110814 TGACGAATATGTCCCCAAAGAAT 57.889 39.130 0.00 0.00 38.11 2.40
712 718 4.881273 TGACGAATATGTCCCCAAAGAATG 59.119 41.667 0.00 0.00 38.11 2.67
726 733 5.335191 CCCAAAGAATGAGAGAAAAAGACCG 60.335 44.000 0.00 0.00 0.00 4.79
738 745 4.698304 AGAAAAAGACCGTGAACTTGACAA 59.302 37.500 0.00 0.00 0.00 3.18
744 751 3.828786 ACCGTGAACTTGACAAACAAAC 58.171 40.909 0.00 0.00 38.08 2.93
746 753 3.425094 CCGTGAACTTGACAAACAAACGA 60.425 43.478 12.21 0.00 39.69 3.85
748 755 4.791163 CGTGAACTTGACAAACAAACGAAT 59.209 37.500 7.12 0.00 39.69 3.34
756 763 8.528295 ACTTGACAAACAAACGAATAAAATTCG 58.472 29.630 17.80 17.80 39.59 3.34
761 768 8.861101 ACAAACAAACGAATAAAATTCGAACAA 58.139 25.926 24.22 0.00 43.97 2.83
765 772 8.045557 ACAAACGAATAAAATTCGAACAAAACG 58.954 29.630 24.22 3.87 43.97 3.60
766 773 7.667984 AACGAATAAAATTCGAACAAAACGT 57.332 28.000 24.22 4.51 43.97 3.99
767 774 7.299053 ACGAATAAAATTCGAACAAAACGTC 57.701 32.000 24.22 0.00 43.97 4.34
771 778 1.868469 ATTCGAACAAAACGTCCCGA 58.132 45.000 0.00 0.00 32.85 5.14
772 779 1.210870 TTCGAACAAAACGTCCCGAG 58.789 50.000 0.00 0.00 35.15 4.63
773 780 0.102844 TCGAACAAAACGTCCCGAGT 59.897 50.000 0.00 0.00 31.62 4.18
775 782 1.328374 CGAACAAAACGTCCCGAGTTT 59.672 47.619 0.00 0.00 42.86 2.66
776 783 2.711885 GAACAAAACGTCCCGAGTTTG 58.288 47.619 6.60 6.60 41.10 2.93
778 785 1.937899 ACAAAACGTCCCGAGTTTGAG 59.062 47.619 13.50 6.52 41.10 3.02
780 787 2.806244 CAAAACGTCCCGAGTTTGAGAT 59.194 45.455 2.66 0.00 41.10 2.75
781 788 3.947910 AAACGTCCCGAGTTTGAGATA 57.052 42.857 0.00 0.00 39.96 1.98
783 790 2.444421 ACGTCCCGAGTTTGAGATAGT 58.556 47.619 0.00 0.00 0.00 2.12
785 792 3.179830 CGTCCCGAGTTTGAGATAGTTG 58.820 50.000 0.00 0.00 0.00 3.16
787 794 4.174762 GTCCCGAGTTTGAGATAGTTGAC 58.825 47.826 0.00 0.00 0.00 3.18
788 795 3.194968 TCCCGAGTTTGAGATAGTTGACC 59.805 47.826 0.00 0.00 0.00 4.02
789 796 3.195825 CCCGAGTTTGAGATAGTTGACCT 59.804 47.826 0.00 0.00 0.00 3.85
876 890 2.513897 CCTCCCAATCCGTTCCGC 60.514 66.667 0.00 0.00 0.00 5.54
1159 1180 1.063717 CCTGCTCTCTCCTCTTCTCCT 60.064 57.143 0.00 0.00 0.00 3.69
1181 1203 1.134189 CCTTCGATTAGTTCCACCCCC 60.134 57.143 0.00 0.00 0.00 5.40
1206 1228 1.202855 TCGTTACTCCTAGCCGCCTAT 60.203 52.381 0.00 0.00 0.00 2.57
1243 1265 0.172803 CCACCGGGAACTTCTAGTCG 59.827 60.000 6.32 0.00 35.59 4.18
1290 1312 1.001815 TGGCAACTTTTAGTCAAGCGC 60.002 47.619 0.00 0.00 37.61 5.92
1368 1390 6.960468 GTTCAAAACCTTTCCTTCTCAGTAG 58.040 40.000 0.00 0.00 0.00 2.57
1387 1409 3.004752 AGATGAGTTTATGTGGGGTGC 57.995 47.619 0.00 0.00 0.00 5.01
1389 1411 2.666272 TGAGTTTATGTGGGGTGCAA 57.334 45.000 0.00 0.00 0.00 4.08
1399 1683 3.300388 TGTGGGGTGCAACTTTAATTGA 58.700 40.909 0.00 0.00 36.74 2.57
1403 1687 4.776837 TGGGGTGCAACTTTAATTGATCAT 59.223 37.500 0.00 0.00 36.74 2.45
1425 1709 2.242965 TGGAGGATCAACTGCCATTCAT 59.757 45.455 0.00 0.00 36.25 2.57
1429 1713 5.182760 GGAGGATCAACTGCCATTCATAATC 59.817 44.000 0.00 0.00 36.25 1.75
1432 1716 2.618241 TCAACTGCCATTCATAATCGGC 59.382 45.455 0.00 0.00 45.11 5.54
1438 1722 3.141398 GCCATTCATAATCGGCTGAAGA 58.859 45.455 0.00 0.00 41.50 2.87
1443 1727 2.802247 TCATAATCGGCTGAAGATTGCG 59.198 45.455 0.00 0.00 38.61 4.85
1461 1745 3.930336 TGCGTCTTCTGATTGTCTCAAT 58.070 40.909 0.00 0.00 32.14 2.57
1481 1781 7.430793 TCTCAATAATCGTTTTGTGTGTGTTTG 59.569 33.333 0.00 0.00 0.00 2.93
1499 1799 9.891828 GTGTGTTTGATATCATTGTTAGTTCAA 57.108 29.630 6.17 0.00 0.00 2.69
1526 1826 1.281867 CCTGGTTGGCTGGTAGAATCA 59.718 52.381 0.00 0.00 0.00 2.57
2007 2308 6.754193 AGCATAACTAGTATTGAAGCTCTCC 58.246 40.000 0.00 0.00 0.00 3.71
2339 2640 6.187125 AGTCATGATGTGTATTTTCTGTGC 57.813 37.500 0.00 0.00 0.00 4.57
2481 2782 6.936279 TCGTCTTCCTTCTTCTATCACAAAT 58.064 36.000 0.00 0.00 0.00 2.32
2550 2851 3.583276 TTGGCTGGCGTACACCTCG 62.583 63.158 0.85 0.00 0.00 4.63
2659 2960 6.364701 TGCAATGAAGCTGGTATAAAGGTAT 58.635 36.000 0.00 0.00 34.99 2.73
2869 3170 5.931441 ACTGTCTGAAGAAGAAATTTCCG 57.069 39.130 14.61 0.00 36.40 4.30
2915 3216 3.758554 ACCAGTTCCATTGTTACTCATGC 59.241 43.478 0.00 0.00 0.00 4.06
2924 3225 2.412870 TGTTACTCATGCTGACGTTGG 58.587 47.619 0.00 0.00 0.00 3.77
2926 3227 0.735978 TACTCATGCTGACGTTGGCG 60.736 55.000 8.68 0.00 44.93 5.69
2960 3261 5.529060 GCTAACTTATCTGCACATTTAGGCT 59.471 40.000 0.00 0.00 0.00 4.58
2984 3285 2.113986 GCTTGTCCCCAGTGTGCT 59.886 61.111 0.00 0.00 0.00 4.40
3323 3658 1.524961 TGGTATCACCATGCGGTCC 59.475 57.895 0.00 0.00 44.71 4.46
3324 3659 0.980754 TGGTATCACCATGCGGTCCT 60.981 55.000 0.00 0.00 44.71 3.85
3325 3660 0.180406 GGTATCACCATGCGGTCCTT 59.820 55.000 0.00 0.00 44.71 3.36
3326 3661 1.583054 GTATCACCATGCGGTCCTTC 58.417 55.000 0.00 0.00 44.71 3.46
3327 3662 1.139058 GTATCACCATGCGGTCCTTCT 59.861 52.381 0.00 0.00 44.71 2.85
3328 3663 0.107508 ATCACCATGCGGTCCTTCTG 60.108 55.000 0.00 0.00 44.71 3.02
3329 3664 1.191489 TCACCATGCGGTCCTTCTGA 61.191 55.000 0.00 0.00 44.71 3.27
3330 3665 0.321564 CACCATGCGGTCCTTCTGAA 60.322 55.000 0.00 0.00 44.71 3.02
3331 3666 0.036010 ACCATGCGGTCCTTCTGAAG 60.036 55.000 10.46 10.46 44.71 3.02
3332 3667 0.250234 CCATGCGGTCCTTCTGAAGA 59.750 55.000 18.68 2.53 0.00 2.87
3333 3668 1.339055 CCATGCGGTCCTTCTGAAGAA 60.339 52.381 18.68 0.00 0.00 2.52
3334 3669 5.743158 ACCATGCGGTCCTTCTGAAGAAG 62.743 52.174 18.68 12.30 44.71 2.85
3346 3681 6.214191 CTTCTGAAGAAGTAGCTGGTATCA 57.786 41.667 12.01 0.00 44.80 2.15
3347 3682 5.584253 TCTGAAGAAGTAGCTGGTATCAC 57.416 43.478 0.00 0.00 0.00 3.06
3391 3726 3.496870 CCTGGAGTTACTTGCTTGACCTT 60.497 47.826 0.00 0.00 0.00 3.50
3476 3812 7.493367 CCTCTGTTAGTTTAAGTAGGAGGATG 58.507 42.308 14.43 0.00 0.00 3.51
3661 4002 2.742372 CGTCAGGGCCCAAAGACG 60.742 66.667 34.47 34.47 46.12 4.18
3790 4131 2.632377 TCTGTTCCATCCATTTCTCGC 58.368 47.619 0.00 0.00 0.00 5.03
3822 4163 8.314751 CCTTAGCTTAGCTTAGGCTCATTATAA 58.685 37.037 23.59 2.13 46.06 0.98
3920 4494 3.247442 CGCATTAGAGGTAACACGTTGA 58.753 45.455 0.00 0.00 41.41 3.18
4017 4594 0.397941 TTGAGGAGGCAACAGGACAG 59.602 55.000 0.00 0.00 41.41 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.145985 CACGCCAACATCTACACTATATTAGT 58.854 38.462 0.00 0.00 40.28 2.24
25 26 6.586463 CCACGCCAACATCTACACTATATTAG 59.414 42.308 0.00 0.00 0.00 1.73
26 27 6.265876 TCCACGCCAACATCTACACTATATTA 59.734 38.462 0.00 0.00 0.00 0.98
27 28 5.069914 TCCACGCCAACATCTACACTATATT 59.930 40.000 0.00 0.00 0.00 1.28
28 29 4.587262 TCCACGCCAACATCTACACTATAT 59.413 41.667 0.00 0.00 0.00 0.86
29 30 3.955551 TCCACGCCAACATCTACACTATA 59.044 43.478 0.00 0.00 0.00 1.31
30 31 2.764010 TCCACGCCAACATCTACACTAT 59.236 45.455 0.00 0.00 0.00 2.12
31 32 2.172679 TCCACGCCAACATCTACACTA 58.827 47.619 0.00 0.00 0.00 2.74
32 33 0.973632 TCCACGCCAACATCTACACT 59.026 50.000 0.00 0.00 0.00 3.55
33 34 1.933853 GATCCACGCCAACATCTACAC 59.066 52.381 0.00 0.00 0.00 2.90
34 35 1.831106 AGATCCACGCCAACATCTACA 59.169 47.619 0.00 0.00 0.00 2.74
35 36 2.205074 CAGATCCACGCCAACATCTAC 58.795 52.381 0.00 0.00 0.00 2.59
36 37 1.138859 CCAGATCCACGCCAACATCTA 59.861 52.381 0.00 0.00 0.00 1.98
37 38 0.107508 CCAGATCCACGCCAACATCT 60.108 55.000 0.00 0.00 0.00 2.90
38 39 1.718757 GCCAGATCCACGCCAACATC 61.719 60.000 0.00 0.00 0.00 3.06
39 40 1.750399 GCCAGATCCACGCCAACAT 60.750 57.895 0.00 0.00 0.00 2.71
40 41 2.359850 GCCAGATCCACGCCAACA 60.360 61.111 0.00 0.00 0.00 3.33
41 42 3.134127 GGCCAGATCCACGCCAAC 61.134 66.667 0.00 0.00 42.52 3.77
55 56 4.101448 ATGCGAGGTGGAGTGGCC 62.101 66.667 0.00 0.00 37.10 5.36
56 57 2.512515 GATGCGAGGTGGAGTGGC 60.513 66.667 0.00 0.00 0.00 5.01
57 58 0.460987 GAAGATGCGAGGTGGAGTGG 60.461 60.000 0.00 0.00 0.00 4.00
58 59 0.534412 AGAAGATGCGAGGTGGAGTG 59.466 55.000 0.00 0.00 0.00 3.51
59 60 2.145397 TAGAAGATGCGAGGTGGAGT 57.855 50.000 0.00 0.00 0.00 3.85
60 61 3.068732 TGAATAGAAGATGCGAGGTGGAG 59.931 47.826 0.00 0.00 0.00 3.86
61 62 3.031013 TGAATAGAAGATGCGAGGTGGA 58.969 45.455 0.00 0.00 0.00 4.02
62 63 3.459232 TGAATAGAAGATGCGAGGTGG 57.541 47.619 0.00 0.00 0.00 4.61
63 64 3.993081 GGATGAATAGAAGATGCGAGGTG 59.007 47.826 0.00 0.00 0.00 4.00
64 65 3.007398 GGGATGAATAGAAGATGCGAGGT 59.993 47.826 0.00 0.00 0.00 3.85
65 66 3.594134 GGGATGAATAGAAGATGCGAGG 58.406 50.000 0.00 0.00 0.00 4.63
66 67 3.007290 TGGGGATGAATAGAAGATGCGAG 59.993 47.826 0.00 0.00 0.00 5.03
67 68 2.972021 TGGGGATGAATAGAAGATGCGA 59.028 45.455 0.00 0.00 0.00 5.10
68 69 3.407424 TGGGGATGAATAGAAGATGCG 57.593 47.619 0.00 0.00 0.00 4.73
69 70 4.914983 TGATGGGGATGAATAGAAGATGC 58.085 43.478 0.00 0.00 0.00 3.91
70 71 7.450634 ACAAATGATGGGGATGAATAGAAGATG 59.549 37.037 0.00 0.00 0.00 2.90
71 72 7.450634 CACAAATGATGGGGATGAATAGAAGAT 59.549 37.037 0.00 0.00 0.00 2.40
72 73 6.774170 CACAAATGATGGGGATGAATAGAAGA 59.226 38.462 0.00 0.00 0.00 2.87
73 74 6.774170 TCACAAATGATGGGGATGAATAGAAG 59.226 38.462 0.00 0.00 31.35 2.85
74 75 6.671605 TCACAAATGATGGGGATGAATAGAA 58.328 36.000 0.00 0.00 31.35 2.10
75 76 6.264771 TCACAAATGATGGGGATGAATAGA 57.735 37.500 0.00 0.00 31.35 1.98
76 77 6.964807 TTCACAAATGATGGGGATGAATAG 57.035 37.500 0.00 0.00 33.85 1.73
77 78 7.068061 TGATTCACAAATGATGGGGATGAATA 58.932 34.615 0.00 0.00 27.40 1.75
78 79 5.900699 TGATTCACAAATGATGGGGATGAAT 59.099 36.000 0.00 0.00 27.40 2.57
79 80 5.270794 TGATTCACAAATGATGGGGATGAA 58.729 37.500 0.00 0.00 27.40 2.57
80 81 4.869451 TGATTCACAAATGATGGGGATGA 58.131 39.130 0.00 0.00 27.40 2.92
81 82 5.801531 ATGATTCACAAATGATGGGGATG 57.198 39.130 0.00 0.00 27.40 3.51
82 83 7.299896 TCTAATGATTCACAAATGATGGGGAT 58.700 34.615 0.00 0.00 31.23 3.85
83 84 6.671605 TCTAATGATTCACAAATGATGGGGA 58.328 36.000 0.00 0.00 33.85 4.81
84 85 6.964807 TCTAATGATTCACAAATGATGGGG 57.035 37.500 0.00 0.00 33.85 4.96
85 86 9.826574 AAATTCTAATGATTCACAAATGATGGG 57.173 29.630 0.00 0.00 33.85 4.00
90 91 9.865321 ACTGGAAATTCTAATGATTCACAAATG 57.135 29.630 0.00 0.00 0.00 2.32
91 92 9.865321 CACTGGAAATTCTAATGATTCACAAAT 57.135 29.630 0.00 0.00 0.00 2.32
92 93 9.076781 TCACTGGAAATTCTAATGATTCACAAA 57.923 29.630 0.00 0.00 0.00 2.83
93 94 8.634335 TCACTGGAAATTCTAATGATTCACAA 57.366 30.769 0.00 0.00 0.00 3.33
94 95 8.812513 ATCACTGGAAATTCTAATGATTCACA 57.187 30.769 0.00 0.00 0.00 3.58
96 97 9.904198 TGTATCACTGGAAATTCTAATGATTCA 57.096 29.630 8.47 7.20 0.00 2.57
98 99 9.685276 TGTGTATCACTGGAAATTCTAATGATT 57.315 29.630 8.47 0.00 35.11 2.57
99 100 9.685276 TTGTGTATCACTGGAAATTCTAATGAT 57.315 29.630 8.26 8.26 35.11 2.45
100 101 9.685276 ATTGTGTATCACTGGAAATTCTAATGA 57.315 29.630 0.00 0.00 35.11 2.57
101 102 9.726232 CATTGTGTATCACTGGAAATTCTAATG 57.274 33.333 0.00 0.00 35.11 1.90
102 103 8.906867 CCATTGTGTATCACTGGAAATTCTAAT 58.093 33.333 3.17 0.00 45.89 1.73
103 104 7.888021 ACCATTGTGTATCACTGGAAATTCTAA 59.112 33.333 12.77 0.00 45.89 2.10
104 105 7.402054 ACCATTGTGTATCACTGGAAATTCTA 58.598 34.615 12.77 0.00 45.89 2.10
105 106 6.248433 ACCATTGTGTATCACTGGAAATTCT 58.752 36.000 12.77 0.00 45.89 2.40
106 107 6.515272 ACCATTGTGTATCACTGGAAATTC 57.485 37.500 12.77 0.00 45.89 2.17
107 108 6.916360 AACCATTGTGTATCACTGGAAATT 57.084 33.333 12.77 0.00 45.89 1.82
108 109 6.095440 GCTAACCATTGTGTATCACTGGAAAT 59.905 38.462 12.77 0.00 45.89 2.17
109 110 5.414454 GCTAACCATTGTGTATCACTGGAAA 59.586 40.000 12.77 2.94 45.89 3.13
110 111 4.941263 GCTAACCATTGTGTATCACTGGAA 59.059 41.667 12.77 3.19 45.89 3.53
111 112 4.019771 TGCTAACCATTGTGTATCACTGGA 60.020 41.667 12.77 0.00 45.89 3.86
113 114 5.163723 CCTTGCTAACCATTGTGTATCACTG 60.164 44.000 1.72 0.00 35.11 3.66
114 115 4.943705 CCTTGCTAACCATTGTGTATCACT 59.056 41.667 1.72 0.00 35.11 3.41
115 116 4.700213 ACCTTGCTAACCATTGTGTATCAC 59.300 41.667 0.00 0.00 34.56 3.06
116 117 4.699735 CACCTTGCTAACCATTGTGTATCA 59.300 41.667 0.00 0.00 0.00 2.15
117 118 4.941263 TCACCTTGCTAACCATTGTGTATC 59.059 41.667 0.00 0.00 31.16 2.24
118 119 4.917385 TCACCTTGCTAACCATTGTGTAT 58.083 39.130 0.00 0.00 31.16 2.29
119 120 4.359434 TCACCTTGCTAACCATTGTGTA 57.641 40.909 0.00 0.00 31.16 2.90
120 121 3.222173 TCACCTTGCTAACCATTGTGT 57.778 42.857 0.00 0.00 31.16 3.72
121 122 3.820467 TCTTCACCTTGCTAACCATTGTG 59.180 43.478 0.00 0.00 0.00 3.33
122 123 4.074970 CTCTTCACCTTGCTAACCATTGT 58.925 43.478 0.00 0.00 0.00 2.71
123 124 3.119708 GCTCTTCACCTTGCTAACCATTG 60.120 47.826 0.00 0.00 0.00 2.82
124 125 3.084786 GCTCTTCACCTTGCTAACCATT 58.915 45.455 0.00 0.00 0.00 3.16
125 126 2.040278 TGCTCTTCACCTTGCTAACCAT 59.960 45.455 0.00 0.00 0.00 3.55
126 127 1.419762 TGCTCTTCACCTTGCTAACCA 59.580 47.619 0.00 0.00 0.00 3.67
127 128 2.185004 TGCTCTTCACCTTGCTAACC 57.815 50.000 0.00 0.00 0.00 2.85
128 129 2.421424 CCATGCTCTTCACCTTGCTAAC 59.579 50.000 0.00 0.00 0.00 2.34
129 130 2.715046 CCATGCTCTTCACCTTGCTAA 58.285 47.619 0.00 0.00 0.00 3.09
130 131 1.679944 GCCATGCTCTTCACCTTGCTA 60.680 52.381 0.00 0.00 0.00 3.49
131 132 0.964358 GCCATGCTCTTCACCTTGCT 60.964 55.000 0.00 0.00 0.00 3.91
132 133 1.246056 TGCCATGCTCTTCACCTTGC 61.246 55.000 0.00 0.00 0.00 4.01
133 134 1.134367 CATGCCATGCTCTTCACCTTG 59.866 52.381 0.00 0.00 0.00 3.61
134 135 1.471119 CATGCCATGCTCTTCACCTT 58.529 50.000 0.00 0.00 0.00 3.50
135 136 3.186345 CATGCCATGCTCTTCACCT 57.814 52.632 0.00 0.00 0.00 4.00
145 146 1.102154 TTAAGGAACGGCATGCCATG 58.898 50.000 34.93 22.44 35.37 3.66
146 147 1.846007 TTTAAGGAACGGCATGCCAT 58.154 45.000 34.93 23.65 35.37 4.40
147 148 1.846007 ATTTAAGGAACGGCATGCCA 58.154 45.000 34.93 13.77 35.37 4.92
148 149 2.959507 AATTTAAGGAACGGCATGCC 57.040 45.000 27.67 27.67 0.00 4.40
149 150 3.370672 CCAAAATTTAAGGAACGGCATGC 59.629 43.478 9.90 9.90 0.00 4.06
150 151 4.388469 CACCAAAATTTAAGGAACGGCATG 59.612 41.667 14.59 0.00 0.00 4.06
151 152 4.565022 CACCAAAATTTAAGGAACGGCAT 58.435 39.130 14.59 0.00 0.00 4.40
152 153 3.800604 GCACCAAAATTTAAGGAACGGCA 60.801 43.478 14.59 0.00 0.00 5.69
153 154 2.734606 GCACCAAAATTTAAGGAACGGC 59.265 45.455 14.59 9.30 0.00 5.68
154 155 3.983741 TGCACCAAAATTTAAGGAACGG 58.016 40.909 14.59 4.62 0.00 4.44
155 156 4.616953 ACTGCACCAAAATTTAAGGAACG 58.383 39.130 14.59 5.70 0.00 3.95
156 157 5.236263 CCAACTGCACCAAAATTTAAGGAAC 59.764 40.000 14.59 7.70 0.00 3.62
157 158 5.129485 TCCAACTGCACCAAAATTTAAGGAA 59.871 36.000 14.59 2.08 0.00 3.36
158 159 4.651503 TCCAACTGCACCAAAATTTAAGGA 59.348 37.500 14.59 0.00 0.00 3.36
159 160 4.954875 TCCAACTGCACCAAAATTTAAGG 58.045 39.130 7.79 7.79 0.00 2.69
160 161 6.048509 ACTTCCAACTGCACCAAAATTTAAG 58.951 36.000 0.00 0.00 0.00 1.85
161 162 5.983540 ACTTCCAACTGCACCAAAATTTAA 58.016 33.333 0.00 0.00 0.00 1.52
162 163 5.606348 ACTTCCAACTGCACCAAAATTTA 57.394 34.783 0.00 0.00 0.00 1.40
163 164 4.486125 ACTTCCAACTGCACCAAAATTT 57.514 36.364 0.00 0.00 0.00 1.82
164 165 4.486125 AACTTCCAACTGCACCAAAATT 57.514 36.364 0.00 0.00 0.00 1.82
165 166 4.486125 AAACTTCCAACTGCACCAAAAT 57.514 36.364 0.00 0.00 0.00 1.82
166 167 3.971245 AAACTTCCAACTGCACCAAAA 57.029 38.095 0.00 0.00 0.00 2.44
167 168 4.646945 TGATAAACTTCCAACTGCACCAAA 59.353 37.500 0.00 0.00 0.00 3.28
168 169 4.037446 GTGATAAACTTCCAACTGCACCAA 59.963 41.667 0.00 0.00 0.00 3.67
169 170 3.568007 GTGATAAACTTCCAACTGCACCA 59.432 43.478 0.00 0.00 0.00 4.17
170 171 3.057526 GGTGATAAACTTCCAACTGCACC 60.058 47.826 0.00 0.00 36.82 5.01
171 172 3.568007 TGGTGATAAACTTCCAACTGCAC 59.432 43.478 0.00 0.00 0.00 4.57
172 173 3.826524 TGGTGATAAACTTCCAACTGCA 58.173 40.909 0.00 0.00 0.00 4.41
173 174 5.391312 AATGGTGATAAACTTCCAACTGC 57.609 39.130 0.00 0.00 33.55 4.40
174 175 5.476599 TGGAATGGTGATAAACTTCCAACTG 59.523 40.000 0.03 0.00 41.68 3.16
175 176 5.640147 TGGAATGGTGATAAACTTCCAACT 58.360 37.500 0.03 0.00 41.68 3.16
176 177 5.975693 TGGAATGGTGATAAACTTCCAAC 57.024 39.130 0.03 0.00 41.68 3.77
177 178 6.953520 AGAATGGAATGGTGATAAACTTCCAA 59.046 34.615 6.43 0.00 46.06 3.53
178 179 6.493166 AGAATGGAATGGTGATAAACTTCCA 58.507 36.000 4.92 4.92 46.74 3.53
179 180 7.410120 AAGAATGGAATGGTGATAAACTTCC 57.590 36.000 0.00 0.00 36.69 3.46
180 181 9.710900 AAAAAGAATGGAATGGTGATAAACTTC 57.289 29.630 0.00 0.00 0.00 3.01
203 204 8.673711 AGAATAGTGCGCTAATATCAACAAAAA 58.326 29.630 11.71 0.00 0.00 1.94
204 205 8.208718 AGAATAGTGCGCTAATATCAACAAAA 57.791 30.769 11.71 0.00 0.00 2.44
205 206 7.786178 AGAATAGTGCGCTAATATCAACAAA 57.214 32.000 11.71 0.00 0.00 2.83
206 207 7.710907 AGAAGAATAGTGCGCTAATATCAACAA 59.289 33.333 11.71 0.00 0.00 2.83
207 208 7.210174 AGAAGAATAGTGCGCTAATATCAACA 58.790 34.615 11.71 0.00 0.00 3.33
208 209 7.644986 AGAAGAATAGTGCGCTAATATCAAC 57.355 36.000 11.71 8.23 0.00 3.18
209 210 8.577296 ACTAGAAGAATAGTGCGCTAATATCAA 58.423 33.333 11.71 0.00 34.68 2.57
210 211 8.112016 ACTAGAAGAATAGTGCGCTAATATCA 57.888 34.615 11.71 0.00 34.68 2.15
213 214 7.968956 GCATACTAGAAGAATAGTGCGCTAATA 59.031 37.037 11.71 0.00 36.66 0.98
214 215 6.809196 GCATACTAGAAGAATAGTGCGCTAAT 59.191 38.462 11.71 2.08 36.66 1.73
215 216 6.150318 GCATACTAGAAGAATAGTGCGCTAA 58.850 40.000 11.71 0.00 36.66 3.09
216 217 5.335740 GGCATACTAGAAGAATAGTGCGCTA 60.336 44.000 9.88 9.88 36.66 4.26
217 218 4.551388 GCATACTAGAAGAATAGTGCGCT 58.449 43.478 9.73 4.58 36.66 5.92
218 219 3.675698 GGCATACTAGAAGAATAGTGCGC 59.324 47.826 0.00 0.00 36.66 6.09
219 220 4.238514 GGGCATACTAGAAGAATAGTGCG 58.761 47.826 0.00 0.00 36.66 5.34
220 221 5.215252 TGGGCATACTAGAAGAATAGTGC 57.785 43.478 0.00 0.00 36.66 4.40
221 222 7.220030 ACATTGGGCATACTAGAAGAATAGTG 58.780 38.462 0.00 0.00 36.66 2.74
222 223 7.380423 ACATTGGGCATACTAGAAGAATAGT 57.620 36.000 0.00 0.00 39.35 2.12
223 224 7.933577 TCAACATTGGGCATACTAGAAGAATAG 59.066 37.037 0.00 0.00 0.00 1.73
224 225 7.801104 TCAACATTGGGCATACTAGAAGAATA 58.199 34.615 0.00 0.00 0.00 1.75
225 226 6.662755 TCAACATTGGGCATACTAGAAGAAT 58.337 36.000 0.00 0.00 0.00 2.40
226 227 6.061022 TCAACATTGGGCATACTAGAAGAA 57.939 37.500 0.00 0.00 0.00 2.52
227 228 5.692115 TCAACATTGGGCATACTAGAAGA 57.308 39.130 0.00 0.00 0.00 2.87
228 229 6.757897 TTTCAACATTGGGCATACTAGAAG 57.242 37.500 0.00 0.00 0.00 2.85
229 230 6.945435 TCTTTTCAACATTGGGCATACTAGAA 59.055 34.615 0.00 0.00 0.00 2.10
230 231 6.480763 TCTTTTCAACATTGGGCATACTAGA 58.519 36.000 0.00 0.00 0.00 2.43
231 232 6.757897 TCTTTTCAACATTGGGCATACTAG 57.242 37.500 0.00 0.00 0.00 2.57
232 233 7.716799 AATCTTTTCAACATTGGGCATACTA 57.283 32.000 0.00 0.00 0.00 1.82
233 234 6.610075 AATCTTTTCAACATTGGGCATACT 57.390 33.333 0.00 0.00 0.00 2.12
234 235 7.671495 AAAATCTTTTCAACATTGGGCATAC 57.329 32.000 0.00 0.00 0.00 2.39
235 236 7.548780 GCTAAAATCTTTTCAACATTGGGCATA 59.451 33.333 0.00 0.00 0.00 3.14
236 237 6.372381 GCTAAAATCTTTTCAACATTGGGCAT 59.628 34.615 0.00 0.00 0.00 4.40
237 238 5.700373 GCTAAAATCTTTTCAACATTGGGCA 59.300 36.000 0.00 0.00 0.00 5.36
238 239 5.700373 TGCTAAAATCTTTTCAACATTGGGC 59.300 36.000 0.00 0.00 0.00 5.36
239 240 7.442062 AGTTGCTAAAATCTTTTCAACATTGGG 59.558 33.333 16.09 0.00 37.35 4.12
240 241 8.369218 AGTTGCTAAAATCTTTTCAACATTGG 57.631 30.769 16.09 0.00 37.35 3.16
241 242 9.640974 CAAGTTGCTAAAATCTTTTCAACATTG 57.359 29.630 16.09 13.67 37.35 2.82
242 243 8.829612 CCAAGTTGCTAAAATCTTTTCAACATT 58.170 29.630 16.09 8.93 37.35 2.71
243 244 7.442062 CCCAAGTTGCTAAAATCTTTTCAACAT 59.558 33.333 16.09 7.06 37.35 2.71
244 245 6.760770 CCCAAGTTGCTAAAATCTTTTCAACA 59.239 34.615 16.09 3.33 37.35 3.33
245 246 6.761242 ACCCAAGTTGCTAAAATCTTTTCAAC 59.239 34.615 0.00 9.97 36.19 3.18
246 247 6.883744 ACCCAAGTTGCTAAAATCTTTTCAA 58.116 32.000 0.00 0.00 0.00 2.69
247 248 6.323739 AGACCCAAGTTGCTAAAATCTTTTCA 59.676 34.615 0.00 0.00 0.00 2.69
248 249 6.749139 AGACCCAAGTTGCTAAAATCTTTTC 58.251 36.000 0.00 0.00 0.00 2.29
249 250 6.731292 AGACCCAAGTTGCTAAAATCTTTT 57.269 33.333 0.00 0.00 0.00 2.27
250 251 6.551227 AGAAGACCCAAGTTGCTAAAATCTTT 59.449 34.615 0.00 0.00 0.00 2.52
251 252 6.071320 AGAAGACCCAAGTTGCTAAAATCTT 58.929 36.000 0.00 0.03 0.00 2.40
252 253 5.635120 AGAAGACCCAAGTTGCTAAAATCT 58.365 37.500 0.00 0.00 0.00 2.40
253 254 5.966742 AGAAGACCCAAGTTGCTAAAATC 57.033 39.130 0.00 0.00 0.00 2.17
254 255 6.071320 AGAAGAAGACCCAAGTTGCTAAAAT 58.929 36.000 0.00 0.00 0.00 1.82
255 256 5.445964 AGAAGAAGACCCAAGTTGCTAAAA 58.554 37.500 0.00 0.00 0.00 1.52
256 257 5.048846 AGAAGAAGACCCAAGTTGCTAAA 57.951 39.130 0.00 0.00 0.00 1.85
257 258 4.706842 AGAAGAAGACCCAAGTTGCTAA 57.293 40.909 0.00 0.00 0.00 3.09
258 259 4.591498 TGTAGAAGAAGACCCAAGTTGCTA 59.409 41.667 0.00 0.00 0.00 3.49
259 260 3.391296 TGTAGAAGAAGACCCAAGTTGCT 59.609 43.478 0.00 0.00 0.00 3.91
260 261 3.740115 TGTAGAAGAAGACCCAAGTTGC 58.260 45.455 0.00 0.00 0.00 4.17
261 262 5.368989 ACTTGTAGAAGAAGACCCAAGTTG 58.631 41.667 6.63 0.00 39.41 3.16
262 263 5.632034 ACTTGTAGAAGAAGACCCAAGTT 57.368 39.130 6.63 0.00 39.41 2.66
263 264 5.632034 AACTTGTAGAAGAAGACCCAAGT 57.368 39.130 6.63 0.00 42.99 3.16
264 265 6.994221 TCTAACTTGTAGAAGAAGACCCAAG 58.006 40.000 6.63 0.00 36.32 3.61
265 266 6.989155 TCTAACTTGTAGAAGAAGACCCAA 57.011 37.500 6.63 0.00 32.98 4.12
266 267 7.554959 AATCTAACTTGTAGAAGAAGACCCA 57.445 36.000 6.63 0.00 31.79 4.51
267 268 9.535878 CATAATCTAACTTGTAGAAGAAGACCC 57.464 37.037 6.63 0.00 31.79 4.46
286 287 9.857656 ATCCACACACTCAATTATTCATAATCT 57.142 29.630 0.00 0.00 32.08 2.40
289 290 9.460019 TGAATCCACACACTCAATTATTCATAA 57.540 29.630 0.00 0.00 29.67 1.90
290 291 8.892723 GTGAATCCACACACTCAATTATTCATA 58.107 33.333 0.00 0.00 42.72 2.15
291 292 7.765307 GTGAATCCACACACTCAATTATTCAT 58.235 34.615 0.00 0.00 42.72 2.57
292 293 7.144722 GTGAATCCACACACTCAATTATTCA 57.855 36.000 0.00 0.00 42.72 2.57
307 308 9.912634 TCAAAGAAATTTAAGATGTGAATCCAC 57.087 29.630 0.00 0.00 43.46 4.02
313 314 8.246180 GCCATCTCAAAGAAATTTAAGATGTGA 58.754 33.333 11.19 10.44 37.19 3.58
314 315 7.219535 CGCCATCTCAAAGAAATTTAAGATGTG 59.780 37.037 11.19 5.91 37.19 3.21
315 316 7.253422 CGCCATCTCAAAGAAATTTAAGATGT 58.747 34.615 11.19 0.00 37.19 3.06
316 317 6.694411 CCGCCATCTCAAAGAAATTTAAGATG 59.306 38.462 6.82 6.82 37.91 2.90
317 318 6.378280 ACCGCCATCTCAAAGAAATTTAAGAT 59.622 34.615 0.00 0.00 0.00 2.40
318 319 5.710099 ACCGCCATCTCAAAGAAATTTAAGA 59.290 36.000 0.00 0.00 0.00 2.10
319 320 5.954335 ACCGCCATCTCAAAGAAATTTAAG 58.046 37.500 0.00 0.00 0.00 1.85
320 321 5.975693 ACCGCCATCTCAAAGAAATTTAA 57.024 34.783 0.00 0.00 0.00 1.52
321 322 5.242838 ACAACCGCCATCTCAAAGAAATTTA 59.757 36.000 0.00 0.00 0.00 1.40
322 323 4.039124 ACAACCGCCATCTCAAAGAAATTT 59.961 37.500 0.00 0.00 0.00 1.82
323 324 3.573967 ACAACCGCCATCTCAAAGAAATT 59.426 39.130 0.00 0.00 0.00 1.82
324 325 3.157087 ACAACCGCCATCTCAAAGAAAT 58.843 40.909 0.00 0.00 0.00 2.17
325 326 2.582052 ACAACCGCCATCTCAAAGAAA 58.418 42.857 0.00 0.00 0.00 2.52
326 327 2.270352 ACAACCGCCATCTCAAAGAA 57.730 45.000 0.00 0.00 0.00 2.52
327 328 2.270352 AACAACCGCCATCTCAAAGA 57.730 45.000 0.00 0.00 0.00 2.52
328 329 2.293122 TGAAACAACCGCCATCTCAAAG 59.707 45.455 0.00 0.00 0.00 2.77
329 330 2.302260 TGAAACAACCGCCATCTCAAA 58.698 42.857 0.00 0.00 0.00 2.69
330 331 1.974265 TGAAACAACCGCCATCTCAA 58.026 45.000 0.00 0.00 0.00 3.02
331 332 1.974265 TTGAAACAACCGCCATCTCA 58.026 45.000 0.00 0.00 0.00 3.27
332 333 3.363341 TTTTGAAACAACCGCCATCTC 57.637 42.857 0.00 0.00 0.00 2.75
333 334 3.652274 CATTTTGAAACAACCGCCATCT 58.348 40.909 0.00 0.00 0.00 2.90
334 335 2.157474 GCATTTTGAAACAACCGCCATC 59.843 45.455 0.00 0.00 0.00 3.51
335 336 2.142319 GCATTTTGAAACAACCGCCAT 58.858 42.857 0.00 0.00 0.00 4.40
336 337 1.137872 AGCATTTTGAAACAACCGCCA 59.862 42.857 0.00 0.00 0.00 5.69
337 338 1.864565 AGCATTTTGAAACAACCGCC 58.135 45.000 0.00 0.00 0.00 6.13
338 339 3.799420 TGTTAGCATTTTGAAACAACCGC 59.201 39.130 0.00 0.00 0.00 5.68
339 340 5.746245 TCTTGTTAGCATTTTGAAACAACCG 59.254 36.000 0.00 0.00 37.02 4.44
340 341 7.532682 TTCTTGTTAGCATTTTGAAACAACC 57.467 32.000 0.00 0.00 37.02 3.77
341 342 9.818796 TTTTTCTTGTTAGCATTTTGAAACAAC 57.181 25.926 0.00 0.00 37.02 3.32
371 372 3.949754 TGAAGAAGGGAGCATAAGCAATG 59.050 43.478 0.00 0.00 45.49 2.82
372 373 4.240881 TGAAGAAGGGAGCATAAGCAAT 57.759 40.909 0.00 0.00 45.49 3.56
373 374 3.719268 TGAAGAAGGGAGCATAAGCAA 57.281 42.857 0.00 0.00 45.49 3.91
374 375 3.457380 AGATGAAGAAGGGAGCATAAGCA 59.543 43.478 0.00 0.00 45.49 3.91
375 376 4.064388 GAGATGAAGAAGGGAGCATAAGC 58.936 47.826 0.00 0.00 42.56 3.09
376 377 5.549742 AGAGATGAAGAAGGGAGCATAAG 57.450 43.478 0.00 0.00 0.00 1.73
377 378 5.965033 AAGAGATGAAGAAGGGAGCATAA 57.035 39.130 0.00 0.00 0.00 1.90
378 379 5.965033 AAAGAGATGAAGAAGGGAGCATA 57.035 39.130 0.00 0.00 0.00 3.14
379 380 4.858965 AAAGAGATGAAGAAGGGAGCAT 57.141 40.909 0.00 0.00 0.00 3.79
380 381 4.202503 ACAAAAGAGATGAAGAAGGGAGCA 60.203 41.667 0.00 0.00 0.00 4.26
381 382 4.331108 ACAAAAGAGATGAAGAAGGGAGC 58.669 43.478 0.00 0.00 0.00 4.70
382 383 6.372937 GGTTACAAAAGAGATGAAGAAGGGAG 59.627 42.308 0.00 0.00 0.00 4.30
383 384 6.238648 GGTTACAAAAGAGATGAAGAAGGGA 58.761 40.000 0.00 0.00 0.00 4.20
384 385 5.122396 CGGTTACAAAAGAGATGAAGAAGGG 59.878 44.000 0.00 0.00 0.00 3.95
385 386 5.701290 ACGGTTACAAAAGAGATGAAGAAGG 59.299 40.000 0.00 0.00 0.00 3.46
386 387 6.787085 ACGGTTACAAAAGAGATGAAGAAG 57.213 37.500 0.00 0.00 0.00 2.85
387 388 6.764085 TCAACGGTTACAAAAGAGATGAAGAA 59.236 34.615 0.00 0.00 0.00 2.52
388 389 6.285224 TCAACGGTTACAAAAGAGATGAAGA 58.715 36.000 0.00 0.00 0.00 2.87
389 390 6.539649 TCAACGGTTACAAAAGAGATGAAG 57.460 37.500 0.00 0.00 0.00 3.02
390 391 6.928979 TTCAACGGTTACAAAAGAGATGAA 57.071 33.333 0.00 0.00 0.00 2.57
391 392 6.708502 TGATTCAACGGTTACAAAAGAGATGA 59.291 34.615 0.00 0.00 0.00 2.92
392 393 6.898041 TGATTCAACGGTTACAAAAGAGATG 58.102 36.000 0.00 0.00 0.00 2.90
393 394 7.360361 GTTGATTCAACGGTTACAAAAGAGAT 58.640 34.615 13.42 0.00 34.63 2.75
394 395 6.721321 GTTGATTCAACGGTTACAAAAGAGA 58.279 36.000 13.42 0.00 34.63 3.10
395 396 6.969669 GTTGATTCAACGGTTACAAAAGAG 57.030 37.500 13.42 0.00 34.63 2.85
408 409 4.145876 TGAGATGTTGCGTTGATTCAAC 57.854 40.909 17.76 17.76 41.99 3.18
409 410 4.696877 AGATGAGATGTTGCGTTGATTCAA 59.303 37.500 0.00 0.00 0.00 2.69
410 411 4.256110 AGATGAGATGTTGCGTTGATTCA 58.744 39.130 0.00 0.00 0.00 2.57
411 412 4.871993 AGATGAGATGTTGCGTTGATTC 57.128 40.909 0.00 0.00 0.00 2.52
412 413 5.633830 AAAGATGAGATGTTGCGTTGATT 57.366 34.783 0.00 0.00 0.00 2.57
413 414 5.633830 AAAAGATGAGATGTTGCGTTGAT 57.366 34.783 0.00 0.00 0.00 2.57
414 415 5.700832 ACTAAAAGATGAGATGTTGCGTTGA 59.299 36.000 0.00 0.00 0.00 3.18
415 416 5.791974 CACTAAAAGATGAGATGTTGCGTTG 59.208 40.000 0.00 0.00 0.00 4.10
416 417 5.470098 ACACTAAAAGATGAGATGTTGCGTT 59.530 36.000 0.00 0.00 0.00 4.84
417 418 4.997395 ACACTAAAAGATGAGATGTTGCGT 59.003 37.500 0.00 0.00 0.00 5.24
418 419 5.536554 ACACTAAAAGATGAGATGTTGCG 57.463 39.130 0.00 0.00 0.00 4.85
419 420 6.037610 CCCTACACTAAAAGATGAGATGTTGC 59.962 42.308 0.00 0.00 0.00 4.17
420 421 7.065085 CACCCTACACTAAAAGATGAGATGTTG 59.935 40.741 0.00 0.00 0.00 3.33
421 422 7.106239 CACCCTACACTAAAAGATGAGATGTT 58.894 38.462 0.00 0.00 0.00 2.71
422 423 6.352222 CCACCCTACACTAAAAGATGAGATGT 60.352 42.308 0.00 0.00 0.00 3.06
423 424 6.051717 CCACCCTACACTAAAAGATGAGATG 58.948 44.000 0.00 0.00 0.00 2.90
424 425 5.396884 GCCACCCTACACTAAAAGATGAGAT 60.397 44.000 0.00 0.00 0.00 2.75
425 426 4.081087 GCCACCCTACACTAAAAGATGAGA 60.081 45.833 0.00 0.00 0.00 3.27
426 427 4.192317 GCCACCCTACACTAAAAGATGAG 58.808 47.826 0.00 0.00 0.00 2.90
427 428 3.054655 GGCCACCCTACACTAAAAGATGA 60.055 47.826 0.00 0.00 0.00 2.92
428 429 3.279434 GGCCACCCTACACTAAAAGATG 58.721 50.000 0.00 0.00 0.00 2.90
429 430 2.916934 TGGCCACCCTACACTAAAAGAT 59.083 45.455 0.00 0.00 0.00 2.40
430 431 2.340731 TGGCCACCCTACACTAAAAGA 58.659 47.619 0.00 0.00 0.00 2.52
431 432 2.871096 TGGCCACCCTACACTAAAAG 57.129 50.000 0.00 0.00 0.00 2.27
432 433 2.224917 CCTTGGCCACCCTACACTAAAA 60.225 50.000 3.88 0.00 0.00 1.52
433 434 1.353022 CCTTGGCCACCCTACACTAAA 59.647 52.381 3.88 0.00 0.00 1.85
434 435 0.988832 CCTTGGCCACCCTACACTAA 59.011 55.000 3.88 0.00 0.00 2.24
435 436 0.117541 TCCTTGGCCACCCTACACTA 59.882 55.000 3.88 0.00 0.00 2.74
436 437 0.550147 ATCCTTGGCCACCCTACACT 60.550 55.000 3.88 0.00 0.00 3.55
437 438 0.394352 CATCCTTGGCCACCCTACAC 60.394 60.000 3.88 0.00 0.00 2.90
438 439 0.844661 ACATCCTTGGCCACCCTACA 60.845 55.000 3.88 0.00 0.00 2.74
439 440 1.134189 GTACATCCTTGGCCACCCTAC 60.134 57.143 3.88 0.00 0.00 3.18
440 441 1.209621 GTACATCCTTGGCCACCCTA 58.790 55.000 3.88 0.00 0.00 3.53
441 442 0.550147 AGTACATCCTTGGCCACCCT 60.550 55.000 3.88 0.00 0.00 4.34
442 443 0.331616 AAGTACATCCTTGGCCACCC 59.668 55.000 3.88 0.00 0.00 4.61
443 444 1.463674 CAAGTACATCCTTGGCCACC 58.536 55.000 3.88 0.00 38.51 4.61
449 450 3.942829 TGAAGCTCCAAGTACATCCTTG 58.057 45.455 0.00 0.00 41.21 3.61
450 451 4.640771 TTGAAGCTCCAAGTACATCCTT 57.359 40.909 0.00 0.00 0.00 3.36
451 452 4.202461 TGTTTGAAGCTCCAAGTACATCCT 60.202 41.667 0.00 0.00 0.00 3.24
452 453 4.072131 TGTTTGAAGCTCCAAGTACATCC 58.928 43.478 0.00 0.00 0.00 3.51
453 454 4.515191 TGTGTTTGAAGCTCCAAGTACATC 59.485 41.667 0.00 0.00 0.00 3.06
454 455 4.460263 TGTGTTTGAAGCTCCAAGTACAT 58.540 39.130 0.00 0.00 0.00 2.29
455 456 3.876914 CTGTGTTTGAAGCTCCAAGTACA 59.123 43.478 4.51 4.51 0.00 2.90
456 457 4.127171 TCTGTGTTTGAAGCTCCAAGTAC 58.873 43.478 0.00 0.00 0.00 2.73
457 458 4.380531 CTCTGTGTTTGAAGCTCCAAGTA 58.619 43.478 0.00 0.00 0.00 2.24
458 459 3.209410 CTCTGTGTTTGAAGCTCCAAGT 58.791 45.455 0.00 0.00 0.00 3.16
459 460 2.551459 CCTCTGTGTTTGAAGCTCCAAG 59.449 50.000 0.00 0.00 0.00 3.61
460 461 2.575532 CCTCTGTGTTTGAAGCTCCAA 58.424 47.619 0.00 0.00 0.00 3.53
461 462 1.815408 GCCTCTGTGTTTGAAGCTCCA 60.815 52.381 0.00 0.00 0.00 3.86
462 463 0.877743 GCCTCTGTGTTTGAAGCTCC 59.122 55.000 0.00 0.00 0.00 4.70
463 464 1.597742 TGCCTCTGTGTTTGAAGCTC 58.402 50.000 0.00 0.00 0.00 4.09
464 465 2.283145 ATGCCTCTGTGTTTGAAGCT 57.717 45.000 0.00 0.00 0.00 3.74
465 466 3.503748 ACTAATGCCTCTGTGTTTGAAGC 59.496 43.478 0.00 0.00 0.00 3.86
466 467 4.756642 TCACTAATGCCTCTGTGTTTGAAG 59.243 41.667 0.00 0.00 0.00 3.02
467 468 4.713553 TCACTAATGCCTCTGTGTTTGAA 58.286 39.130 0.00 0.00 0.00 2.69
468 469 4.318332 CTCACTAATGCCTCTGTGTTTGA 58.682 43.478 0.00 0.00 0.00 2.69
469 470 3.438087 CCTCACTAATGCCTCTGTGTTTG 59.562 47.826 0.00 0.00 0.00 2.93
470 471 3.560025 CCCTCACTAATGCCTCTGTGTTT 60.560 47.826 0.00 0.00 0.00 2.83
471 472 2.026822 CCCTCACTAATGCCTCTGTGTT 60.027 50.000 0.00 0.00 0.00 3.32
472 473 1.556911 CCCTCACTAATGCCTCTGTGT 59.443 52.381 0.00 0.00 0.00 3.72
473 474 1.833630 TCCCTCACTAATGCCTCTGTG 59.166 52.381 0.00 0.00 0.00 3.66
474 475 2.254152 TCCCTCACTAATGCCTCTGT 57.746 50.000 0.00 0.00 0.00 3.41
475 476 2.702478 TCATCCCTCACTAATGCCTCTG 59.298 50.000 0.00 0.00 0.00 3.35
476 477 2.971330 CTCATCCCTCACTAATGCCTCT 59.029 50.000 0.00 0.00 0.00 3.69
477 478 2.968574 TCTCATCCCTCACTAATGCCTC 59.031 50.000 0.00 0.00 0.00 4.70
478 479 2.971330 CTCTCATCCCTCACTAATGCCT 59.029 50.000 0.00 0.00 0.00 4.75
479 480 2.038295 CCTCTCATCCCTCACTAATGCC 59.962 54.545 0.00 0.00 0.00 4.40
480 481 2.968574 TCCTCTCATCCCTCACTAATGC 59.031 50.000 0.00 0.00 0.00 3.56
481 482 4.502950 GCTTCCTCTCATCCCTCACTAATG 60.503 50.000 0.00 0.00 0.00 1.90
482 483 3.645687 GCTTCCTCTCATCCCTCACTAAT 59.354 47.826 0.00 0.00 0.00 1.73
483 484 3.034635 GCTTCCTCTCATCCCTCACTAA 58.965 50.000 0.00 0.00 0.00 2.24
484 485 2.672098 GCTTCCTCTCATCCCTCACTA 58.328 52.381 0.00 0.00 0.00 2.74
494 495 0.396435 TTTCTTGGCGCTTCCTCTCA 59.604 50.000 7.64 0.00 35.26 3.27
539 541 4.983671 AAAGCCTCTTCGTTTGAAACTT 57.016 36.364 6.49 0.00 32.66 2.66
542 544 5.529430 TCATGTAAAGCCTCTTCGTTTGAAA 59.471 36.000 0.00 0.00 32.66 2.69
597 599 0.030101 TTTTTGTGCGGCCTTCTTCG 59.970 50.000 0.00 0.00 0.00 3.79
598 600 3.957383 TTTTTGTGCGGCCTTCTTC 57.043 47.368 0.00 0.00 0.00 2.87
625 630 2.656055 GCATTGGCGGCCTCAAAA 59.344 55.556 21.46 6.25 0.00 2.44
647 652 5.590259 GCTATCATCACCTCTTTTGCCTTTA 59.410 40.000 0.00 0.00 0.00 1.85
648 653 4.400567 GCTATCATCACCTCTTTTGCCTTT 59.599 41.667 0.00 0.00 0.00 3.11
649 654 3.950395 GCTATCATCACCTCTTTTGCCTT 59.050 43.478 0.00 0.00 0.00 4.35
651 656 3.282021 TGCTATCATCACCTCTTTTGCC 58.718 45.455 0.00 0.00 0.00 4.52
652 657 4.970662 TTGCTATCATCACCTCTTTTGC 57.029 40.909 0.00 0.00 0.00 3.68
696 702 6.387192 TTTCTCTCATTCTTTGGGGACATA 57.613 37.500 0.00 0.00 42.32 2.29
703 709 5.239525 ACGGTCTTTTTCTCTCATTCTTTGG 59.760 40.000 0.00 0.00 0.00 3.28
705 711 6.055588 TCACGGTCTTTTTCTCTCATTCTTT 58.944 36.000 0.00 0.00 0.00 2.52
710 716 4.962155 AGTTCACGGTCTTTTTCTCTCAT 58.038 39.130 0.00 0.00 0.00 2.90
711 717 4.402056 AGTTCACGGTCTTTTTCTCTCA 57.598 40.909 0.00 0.00 0.00 3.27
712 718 4.809426 TCAAGTTCACGGTCTTTTTCTCTC 59.191 41.667 0.00 0.00 0.00 3.20
726 733 7.728580 TTATTCGTTTGTTTGTCAAGTTCAC 57.271 32.000 0.00 0.00 37.35 3.18
738 745 9.678247 GTTTTGTTCGAATTTTATTCGTTTGTT 57.322 25.926 18.03 0.00 42.09 2.83
744 751 6.183359 GGGACGTTTTGTTCGAATTTTATTCG 60.183 38.462 13.93 13.93 42.74 3.34
746 753 6.996562 GGGACGTTTTGTTCGAATTTTATT 57.003 33.333 0.00 0.00 0.00 1.40
765 772 4.174762 GTCAACTATCTCAAACTCGGGAC 58.825 47.826 0.00 0.00 0.00 4.46
766 773 3.194968 GGTCAACTATCTCAAACTCGGGA 59.805 47.826 0.00 0.00 0.00 5.14
767 774 3.195825 AGGTCAACTATCTCAAACTCGGG 59.804 47.826 0.00 0.00 0.00 5.14
771 778 7.540474 TCACTTAGGTCAACTATCTCAAACT 57.460 36.000 0.00 0.00 0.00 2.66
772 779 8.779354 AATCACTTAGGTCAACTATCTCAAAC 57.221 34.615 0.00 0.00 0.00 2.93
773 780 9.219603 CAAATCACTTAGGTCAACTATCTCAAA 57.780 33.333 0.00 0.00 0.00 2.69
775 782 7.331026 CCAAATCACTTAGGTCAACTATCTCA 58.669 38.462 0.00 0.00 0.00 3.27
776 783 6.763610 CCCAAATCACTTAGGTCAACTATCTC 59.236 42.308 0.00 0.00 0.00 2.75
778 785 5.297029 GCCCAAATCACTTAGGTCAACTATC 59.703 44.000 0.00 0.00 0.00 2.08
780 787 4.585879 GCCCAAATCACTTAGGTCAACTA 58.414 43.478 0.00 0.00 0.00 2.24
781 788 3.421844 GCCCAAATCACTTAGGTCAACT 58.578 45.455 0.00 0.00 0.00 3.16
783 790 2.224670 ACGCCCAAATCACTTAGGTCAA 60.225 45.455 0.00 0.00 0.00 3.18
785 792 1.737793 CACGCCCAAATCACTTAGGTC 59.262 52.381 0.00 0.00 0.00 3.85
787 794 1.737793 GTCACGCCCAAATCACTTAGG 59.262 52.381 0.00 0.00 0.00 2.69
788 795 2.159627 GTGTCACGCCCAAATCACTTAG 59.840 50.000 0.00 0.00 0.00 2.18
789 796 2.147958 GTGTCACGCCCAAATCACTTA 58.852 47.619 0.00 0.00 0.00 2.24
937 951 2.203938 GGATCTATGGGGGCGGGA 60.204 66.667 0.00 0.00 0.00 5.14
1146 1167 1.064314 CGAAGGGAGGAGAAGAGGAGA 60.064 57.143 0.00 0.00 0.00 3.71
1159 1180 1.835531 GGGTGGAACTAATCGAAGGGA 59.164 52.381 0.00 0.00 36.74 4.20
1181 1203 1.334243 CGGCTAGGAGTAACGAGAAGG 59.666 57.143 0.00 0.00 0.00 3.46
1195 1217 0.384309 TCGAACACATAGGCGGCTAG 59.616 55.000 23.89 17.12 0.00 3.42
1206 1228 0.724549 GGCGCATTACATCGAACACA 59.275 50.000 10.83 0.00 0.00 3.72
1243 1265 2.541588 GCATTACATCGAACACATGGGC 60.542 50.000 0.00 0.00 0.00 5.36
1290 1312 0.246635 ATCAGTCGAAGTGGAACGGG 59.753 55.000 0.00 0.00 45.86 5.28
1346 1368 6.494666 TCTACTGAGAAGGAAAGGTTTTGA 57.505 37.500 0.00 0.00 0.00 2.69
1368 1390 2.722094 TGCACCCCACATAAACTCATC 58.278 47.619 0.00 0.00 0.00 2.92
1381 1403 4.799564 TGATCAATTAAAGTTGCACCCC 57.200 40.909 0.00 0.00 0.00 4.95
1382 1404 5.581874 CCAATGATCAATTAAAGTTGCACCC 59.418 40.000 0.00 0.00 0.00 4.61
1387 1409 8.689061 TGATCCTCCAATGATCAATTAAAGTTG 58.311 33.333 0.00 0.00 44.12 3.16
1399 1683 2.242965 TGGCAGTTGATCCTCCAATGAT 59.757 45.455 0.00 0.00 0.00 2.45
1403 1687 2.041485 TGAATGGCAGTTGATCCTCCAA 59.959 45.455 0.00 0.00 0.00 3.53
1425 1709 2.159099 AGACGCAATCTTCAGCCGATTA 60.159 45.455 0.00 0.00 31.62 1.75
1429 1713 2.460330 AAGACGCAATCTTCAGCCG 58.540 52.632 0.00 0.00 44.99 5.52
1438 1722 3.930336 TGAGACAATCAGAAGACGCAAT 58.070 40.909 0.00 0.00 32.77 3.56
1443 1727 7.763172 ACGATTATTGAGACAATCAGAAGAC 57.237 36.000 0.00 0.00 39.68 3.01
1461 1745 8.560374 TGATATCAAACACACACAAAACGATTA 58.440 29.630 1.98 0.00 0.00 1.75
1499 1799 0.038744 CCAGCCAACCAGGTCTCAAT 59.961 55.000 0.00 0.00 40.61 2.57
1561 1861 4.292186 AGGCAATAATATGGTCGCTGAT 57.708 40.909 0.00 0.00 0.00 2.90
2007 2308 0.601576 TGGTTGTCAATCCGGACGTG 60.602 55.000 6.12 8.72 40.72 4.49
2307 2608 2.762887 ACACATCATGACTCGTCCATCT 59.237 45.455 0.00 0.00 0.00 2.90
2339 2640 2.408271 TCAGCAGATACAAAGCAGGG 57.592 50.000 0.00 0.00 0.00 4.45
2481 2782 8.244113 GTCTTTTCCTTTTGAGAGAACAAGAAA 58.756 33.333 0.00 0.00 0.00 2.52
2550 2851 3.987594 AAGACCAATCTTGCCCTCC 57.012 52.632 0.00 0.00 43.86 4.30
2659 2960 9.558396 TGCAATATCATAGTAATCACACATCAA 57.442 29.630 0.00 0.00 0.00 2.57
2924 3225 4.389077 AGATAAGTTAGCAAACAGTGACGC 59.611 41.667 0.00 0.00 38.12 5.19
2926 3227 5.179368 TGCAGATAAGTTAGCAAACAGTGAC 59.821 40.000 0.00 0.00 38.12 3.67
2930 3231 5.611796 TGTGCAGATAAGTTAGCAAACAG 57.388 39.130 0.28 0.00 38.91 3.16
2960 3261 0.832135 ACTGGGGACAAGCTCTCGAA 60.832 55.000 0.00 0.00 42.06 3.71
2984 3285 1.609239 CTGCTGGGGCCATTCAGTA 59.391 57.895 17.45 13.58 37.74 2.74
3195 3496 1.136984 GCTGTGAAGCATCTGCAGC 59.863 57.895 17.91 17.91 45.16 5.25
3314 3649 2.005451 CTTCTTCAGAAGGACCGCATG 58.995 52.381 10.42 0.00 45.79 4.06
3315 3650 2.393271 CTTCTTCAGAAGGACCGCAT 57.607 50.000 10.42 0.00 45.79 4.73
3316 3651 3.914984 CTTCTTCAGAAGGACCGCA 57.085 52.632 10.42 0.00 45.79 5.69
3324 3659 5.717178 AGTGATACCAGCTACTTCTTCAGAA 59.283 40.000 0.00 0.00 0.00 3.02
3325 3660 5.265191 AGTGATACCAGCTACTTCTTCAGA 58.735 41.667 0.00 0.00 0.00 3.27
3326 3661 5.590530 AGTGATACCAGCTACTTCTTCAG 57.409 43.478 0.00 0.00 0.00 3.02
3327 3662 6.461648 GCATAGTGATACCAGCTACTTCTTCA 60.462 42.308 0.00 0.00 0.00 3.02
3328 3663 5.923684 GCATAGTGATACCAGCTACTTCTTC 59.076 44.000 0.00 0.00 0.00 2.87
3329 3664 5.600484 AGCATAGTGATACCAGCTACTTCTT 59.400 40.000 0.00 0.00 0.00 2.52
3330 3665 5.010516 CAGCATAGTGATACCAGCTACTTCT 59.989 44.000 0.00 0.00 0.00 2.85
3331 3666 5.226396 CAGCATAGTGATACCAGCTACTTC 58.774 45.833 0.00 0.00 0.00 3.01
3332 3667 4.039730 CCAGCATAGTGATACCAGCTACTT 59.960 45.833 0.00 0.00 0.00 2.24
3333 3668 3.576118 CCAGCATAGTGATACCAGCTACT 59.424 47.826 0.00 0.00 0.00 2.57
3334 3669 3.322254 ACCAGCATAGTGATACCAGCTAC 59.678 47.826 0.00 0.00 0.00 3.58
3335 3670 3.321968 CACCAGCATAGTGATACCAGCTA 59.678 47.826 0.00 0.00 37.42 3.32
3336 3671 2.103771 CACCAGCATAGTGATACCAGCT 59.896 50.000 0.00 0.00 37.42 4.24
3337 3672 2.487934 CACCAGCATAGTGATACCAGC 58.512 52.381 0.00 0.00 37.42 4.85
3338 3673 2.435805 ACCACCAGCATAGTGATACCAG 59.564 50.000 2.67 0.00 37.42 4.00
3339 3674 2.477245 ACCACCAGCATAGTGATACCA 58.523 47.619 2.67 0.00 37.42 3.25
3340 3675 3.560636 AACCACCAGCATAGTGATACC 57.439 47.619 2.67 0.00 37.42 2.73
3341 3676 4.572389 CAGAAACCACCAGCATAGTGATAC 59.428 45.833 2.67 0.00 37.42 2.24
3342 3677 4.769688 CAGAAACCACCAGCATAGTGATA 58.230 43.478 2.67 0.00 37.42 2.15
3343 3678 3.614092 CAGAAACCACCAGCATAGTGAT 58.386 45.455 2.67 0.00 37.42 3.06
3344 3679 2.875672 GCAGAAACCACCAGCATAGTGA 60.876 50.000 2.67 0.00 37.42 3.41
3345 3680 1.470098 GCAGAAACCACCAGCATAGTG 59.530 52.381 0.00 0.00 34.91 2.74
3346 3681 1.614317 GGCAGAAACCACCAGCATAGT 60.614 52.381 0.00 0.00 0.00 2.12
3347 3682 1.098050 GGCAGAAACCACCAGCATAG 58.902 55.000 0.00 0.00 0.00 2.23
3391 3726 2.260869 GCAAACGGGCAAGCAGAGA 61.261 57.895 0.00 0.00 0.00 3.10
3661 4002 2.223433 GCTGTATGCCACTTCAGATTGC 60.223 50.000 0.00 0.00 35.15 3.56
3997 4574 0.108585 TGTCCTGTTGCCTCCTCAAC 59.891 55.000 0.14 0.14 44.80 3.18
4005 4582 1.968540 GCTGGTCTGTCCTGTTGCC 60.969 63.158 0.54 0.00 37.45 4.52
4011 4588 1.265236 CTCTGAAGCTGGTCTGTCCT 58.735 55.000 0.00 0.00 37.07 3.85
4206 4792 2.816777 TGGGCATGCCATTTGTACTA 57.183 45.000 36.56 9.11 37.98 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.