Multiple sequence alignment - TraesCS5D01G150400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G150400 chr5D 100.000 5268 0 0 1 5268 239272418 239277685 0.000000e+00 9729.0
1 TraesCS5D01G150400 chr5D 77.492 311 56 11 1 309 531899002 531898704 1.950000e-39 174.0
2 TraesCS5D01G150400 chr5B 96.284 2341 55 9 599 2932 264291172 264288857 0.000000e+00 3812.0
3 TraesCS5D01G150400 chr5B 97.672 1074 23 2 3329 4401 264288506 264287434 0.000000e+00 1844.0
4 TraesCS5D01G150400 chr5B 95.363 496 20 2 4776 5268 264286830 264286335 0.000000e+00 785.0
5 TraesCS5D01G150400 chr5B 96.466 283 10 0 3050 3332 264288855 264288573 7.990000e-128 468.0
6 TraesCS5D01G150400 chr5B 89.045 356 17 13 4432 4777 264287436 264287093 6.310000e-114 422.0
7 TraesCS5D01G150400 chr5B 79.125 297 49 10 17 313 682421496 682421213 5.380000e-45 193.0
8 TraesCS5D01G150400 chr5B 91.379 58 4 1 3329 3385 408958068 408958125 1.570000e-10 78.7
9 TraesCS5D01G150400 chr5B 92.000 50 4 0 3332 3381 331973184 331973233 2.630000e-08 71.3
10 TraesCS5D01G150400 chr5B 100.000 28 0 0 4412 4439 391810213 391810186 1.000000e-02 52.8
11 TraesCS5D01G150400 chr5A 95.965 1809 49 7 1525 3332 314671807 314670022 0.000000e+00 2915.0
12 TraesCS5D01G150400 chr5A 96.372 1075 33 4 3332 4401 314669951 314668878 0.000000e+00 1764.0
13 TraesCS5D01G150400 chr5A 91.863 848 36 16 4432 5268 314668880 314668055 0.000000e+00 1153.0
14 TraesCS5D01G150400 chr5A 93.822 437 21 3 653 1087 314672682 314672250 0.000000e+00 652.0
15 TraesCS5D01G150400 chr5A 94.353 425 15 4 1112 1528 314672270 314671847 1.240000e-180 643.0
16 TraesCS5D01G150400 chr5A 95.455 66 3 0 595 660 314674315 314674250 7.220000e-19 106.0
17 TraesCS5D01G150400 chrUn 100.000 407 0 0 3362 3768 477999196 477999602 0.000000e+00 752.0
18 TraesCS5D01G150400 chr2B 81.250 272 41 9 7 277 63263465 63263203 1.490000e-50 211.0
19 TraesCS5D01G150400 chr2B 78.548 303 49 9 12 313 772719861 772719574 9.010000e-43 185.0
20 TraesCS5D01G150400 chr2B 88.235 119 13 1 3196 3313 254290647 254290529 1.980000e-29 141.0
21 TraesCS5D01G150400 chr2B 85.484 124 13 3 3207 3330 217933306 217933188 1.990000e-24 124.0
22 TraesCS5D01G150400 chr7A 79.487 312 48 14 7 317 189713059 189712763 1.920000e-49 207.0
23 TraesCS5D01G150400 chr1A 79.180 317 45 18 7 319 299426733 299426434 3.220000e-47 200.0
24 TraesCS5D01G150400 chr1A 87.838 74 8 1 1209 1281 99002542 99002615 9.400000e-13 86.1
25 TraesCS5D01G150400 chr6D 78.667 300 54 6 16 314 7041049 7040759 1.940000e-44 191.0
26 TraesCS5D01G150400 chr6D 77.636 313 54 12 7 316 401694914 401694615 5.420000e-40 176.0
27 TraesCS5D01G150400 chr2D 78.165 316 54 8 1 315 531205255 531205556 2.500000e-43 187.0
28 TraesCS5D01G150400 chr2D 94.828 58 2 1 3328 3385 507261315 507261371 7.270000e-14 89.8
29 TraesCS5D01G150400 chr2D 90.476 63 4 2 3329 3389 585675329 585675267 1.220000e-11 82.4
30 TraesCS5D01G150400 chr4A 89.781 137 13 1 3196 3332 352481754 352481889 1.950000e-39 174.0
31 TraesCS5D01G150400 chr4A 81.364 220 25 9 1161 1380 215251077 215251280 1.170000e-36 165.0
32 TraesCS5D01G150400 chr7D 80.569 211 27 9 1158 1367 143976646 143976843 3.290000e-32 150.0
33 TraesCS5D01G150400 chr7D 81.868 182 26 3 1199 1380 623646394 623646220 4.250000e-31 147.0
34 TraesCS5D01G150400 chr7B 79.621 211 32 6 1158 1367 107821166 107820966 1.980000e-29 141.0
35 TraesCS5D01G150400 chr7B 88.073 109 13 0 3224 3332 107645344 107645236 4.280000e-26 130.0
36 TraesCS5D01G150400 chr1D 86.667 120 13 3 3196 3313 7582572 7582690 4.280000e-26 130.0
37 TraesCS5D01G150400 chr1D 82.482 137 18 3 3196 3332 398867799 398867669 1.200000e-21 115.0
38 TraesCS5D01G150400 chr1D 88.889 54 6 0 1191 1244 67141984 67142037 3.400000e-07 67.6
39 TraesCS5D01G150400 chr1B 83.582 134 17 5 3192 3325 3976354 3976226 2.580000e-23 121.0
40 TraesCS5D01G150400 chr1B 91.379 58 4 1 3329 3385 263784467 263784410 1.570000e-10 78.7
41 TraesCS5D01G150400 chr3A 92.188 64 4 1 3329 3391 749234543 749234606 7.270000e-14 89.8
42 TraesCS5D01G150400 chr3D 93.220 59 3 1 3329 3386 19063450 19063392 9.400000e-13 86.1
43 TraesCS5D01G150400 chr3B 87.931 58 6 1 1191 1247 239783827 239783884 3.400000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G150400 chr5D 239272418 239277685 5267 False 9729.0 9729 100.000000 1 5268 1 chr5D.!!$F1 5267
1 TraesCS5D01G150400 chr5B 264286335 264291172 4837 True 1466.2 3812 94.966000 599 5268 5 chr5B.!!$R3 4669
2 TraesCS5D01G150400 chr5A 314668055 314674315 6260 True 1205.5 2915 94.638333 595 5268 6 chr5A.!!$R1 4673

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
46 47 0.033504 TTCTCTTTCGTGAAGGCGCT 59.966 50.0 7.64 0.00 35.98 5.92 F
175 176 0.036388 TGGTTTGGGTCGAGCATCTC 60.036 55.0 17.59 3.94 0.00 2.75 F
184 185 0.103755 TCGAGCATCTCATGTCTGCC 59.896 55.0 11.45 5.07 36.56 4.85 F
185 186 0.104487 CGAGCATCTCATGTCTGCCT 59.896 55.0 11.45 2.63 36.56 4.75 F
395 396 0.179161 CTAGCTGCGTACTTGCGACT 60.179 55.0 0.00 0.00 37.81 4.18 F
584 585 0.247934 CGCGCCGGAAAAGGAAATAC 60.248 55.0 5.05 0.00 0.00 1.89 F
2115 3747 0.521735 GTTGTTCCGTGATTCAGCCC 59.478 55.0 0.00 0.00 0.00 5.19 F
2914 4550 0.246360 TACATATCCCCTCGCATGCG 59.754 55.0 33.61 33.61 41.35 4.73 F
3120 4756 0.101759 GCGCGTATGTCAGGACCTTA 59.898 55.0 8.43 0.00 0.00 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2011 3643 1.135575 GGAGAAAAGTGCAGCATTCCG 60.136 52.381 0.00 0.0 0.00 4.30 R
2108 3740 0.038166 GAATCACTGGTGGGGCTGAA 59.962 55.000 0.70 0.0 0.00 3.02 R
2119 3751 0.251297 TTGGTGGGGCTGAATCACTG 60.251 55.000 0.00 0.0 0.00 3.66 R
2120 3752 0.706433 ATTGGTGGGGCTGAATCACT 59.294 50.000 0.00 0.0 0.00 3.41 R
2465 4097 7.858052 ATAGAAGTGCAAAATGAAAAACGAG 57.142 32.000 0.00 0.0 0.00 4.18 R
2559 4191 2.781923 TGCTTATGCTTGCAGTTCTCA 58.218 42.857 0.87 0.0 40.48 3.27 R
2996 4632 0.461548 ACATCATCATCGACTGCGGT 59.538 50.000 0.00 0.0 38.28 5.68 R
4091 5803 0.535780 TCGTCGGGTATATCGTGCCT 60.536 55.000 0.00 0.0 32.37 4.75 R
5115 7107 1.082690 GCTTCTTGTAGGCTGTCTGC 58.917 55.000 0.00 0.0 41.94 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 2.126071 CGACGGCGTCTTGGTGAT 60.126 61.111 33.90 0.00 0.00 3.06
26 27 2.444624 CGACGGCGTCTTGGTGATG 61.445 63.158 33.90 14.79 34.89 3.07
27 28 1.374252 GACGGCGTCTTGGTGATGT 60.374 57.895 31.15 0.00 34.29 3.06
28 29 0.949105 GACGGCGTCTTGGTGATGTT 60.949 55.000 31.15 0.00 34.29 2.71
29 30 0.949105 ACGGCGTCTTGGTGATGTTC 60.949 55.000 6.77 0.00 34.29 3.18
30 31 0.670546 CGGCGTCTTGGTGATGTTCT 60.671 55.000 0.00 0.00 34.29 3.01
31 32 1.079503 GGCGTCTTGGTGATGTTCTC 58.920 55.000 0.00 0.00 34.29 2.87
32 33 1.338200 GGCGTCTTGGTGATGTTCTCT 60.338 52.381 0.00 0.00 34.29 3.10
33 34 2.417719 GCGTCTTGGTGATGTTCTCTT 58.582 47.619 0.00 0.00 34.29 2.85
34 35 2.808543 GCGTCTTGGTGATGTTCTCTTT 59.191 45.455 0.00 0.00 34.29 2.52
35 36 3.120511 GCGTCTTGGTGATGTTCTCTTTC 60.121 47.826 0.00 0.00 34.29 2.62
36 37 3.121944 CGTCTTGGTGATGTTCTCTTTCG 59.878 47.826 0.00 0.00 0.00 3.46
37 38 4.058817 GTCTTGGTGATGTTCTCTTTCGT 58.941 43.478 0.00 0.00 0.00 3.85
38 39 4.058124 TCTTGGTGATGTTCTCTTTCGTG 58.942 43.478 0.00 0.00 0.00 4.35
39 40 3.744238 TGGTGATGTTCTCTTTCGTGA 57.256 42.857 0.00 0.00 0.00 4.35
40 41 4.066646 TGGTGATGTTCTCTTTCGTGAA 57.933 40.909 0.00 0.00 0.00 3.18
41 42 4.058124 TGGTGATGTTCTCTTTCGTGAAG 58.942 43.478 0.00 0.00 36.67 3.02
42 43 3.433615 GGTGATGTTCTCTTTCGTGAAGG 59.566 47.826 2.40 0.00 35.98 3.46
43 44 3.067106 TGATGTTCTCTTTCGTGAAGGC 58.933 45.455 2.40 0.00 35.98 4.35
44 45 1.497991 TGTTCTCTTTCGTGAAGGCG 58.502 50.000 2.40 0.00 35.98 5.52
45 46 0.164002 GTTCTCTTTCGTGAAGGCGC 59.836 55.000 0.00 0.00 35.98 6.53
46 47 0.033504 TTCTCTTTCGTGAAGGCGCT 59.966 50.000 7.64 0.00 35.98 5.92
47 48 0.667487 TCTCTTTCGTGAAGGCGCTG 60.667 55.000 7.64 0.00 35.98 5.18
48 49 0.946221 CTCTTTCGTGAAGGCGCTGT 60.946 55.000 7.64 0.00 35.98 4.40
49 50 0.944311 TCTTTCGTGAAGGCGCTGTC 60.944 55.000 7.64 5.56 35.98 3.51
50 51 0.946221 CTTTCGTGAAGGCGCTGTCT 60.946 55.000 7.64 0.00 0.00 3.41
51 52 0.531974 TTTCGTGAAGGCGCTGTCTT 60.532 50.000 7.64 1.33 0.00 3.01
52 53 1.221466 TTCGTGAAGGCGCTGTCTTG 61.221 55.000 7.64 2.28 0.00 3.02
53 54 1.956170 CGTGAAGGCGCTGTCTTGT 60.956 57.895 7.64 0.00 0.00 3.16
54 55 0.666274 CGTGAAGGCGCTGTCTTGTA 60.666 55.000 7.64 0.00 0.00 2.41
55 56 1.726853 GTGAAGGCGCTGTCTTGTAT 58.273 50.000 7.64 0.00 0.00 2.29
56 57 2.076863 GTGAAGGCGCTGTCTTGTATT 58.923 47.619 7.64 0.00 0.00 1.89
57 58 2.094417 GTGAAGGCGCTGTCTTGTATTC 59.906 50.000 7.64 0.00 0.00 1.75
58 59 2.028112 TGAAGGCGCTGTCTTGTATTCT 60.028 45.455 7.64 0.00 0.00 2.40
59 60 2.301577 AGGCGCTGTCTTGTATTCTC 57.698 50.000 7.64 0.00 0.00 2.87
60 61 0.924090 GGCGCTGTCTTGTATTCTCG 59.076 55.000 7.64 0.00 0.00 4.04
61 62 0.299003 GCGCTGTCTTGTATTCTCGC 59.701 55.000 0.00 0.00 34.61 5.03
62 63 0.567968 CGCTGTCTTGTATTCTCGCG 59.432 55.000 0.00 0.00 0.00 5.87
63 64 1.794076 CGCTGTCTTGTATTCTCGCGA 60.794 52.381 9.26 9.26 41.62 5.87
64 65 2.464865 GCTGTCTTGTATTCTCGCGAT 58.535 47.619 10.36 0.00 0.00 4.58
65 66 2.217393 GCTGTCTTGTATTCTCGCGATG 59.783 50.000 10.36 3.99 0.00 3.84
66 67 3.439293 CTGTCTTGTATTCTCGCGATGT 58.561 45.455 10.36 0.64 0.00 3.06
67 68 3.435566 TGTCTTGTATTCTCGCGATGTC 58.564 45.455 10.36 0.00 0.00 3.06
68 69 2.789893 GTCTTGTATTCTCGCGATGTCC 59.210 50.000 10.36 0.00 0.00 4.02
69 70 2.688446 TCTTGTATTCTCGCGATGTCCT 59.312 45.455 10.36 0.00 0.00 3.85
70 71 2.776312 TGTATTCTCGCGATGTCCTC 57.224 50.000 10.36 0.00 0.00 3.71
78 79 2.573869 CGATGTCCTCGGTGCTGT 59.426 61.111 0.00 0.00 43.82 4.40
79 80 1.517257 CGATGTCCTCGGTGCTGTC 60.517 63.158 0.00 0.00 43.82 3.51
80 81 1.893786 GATGTCCTCGGTGCTGTCT 59.106 57.895 0.00 0.00 0.00 3.41
81 82 0.247736 GATGTCCTCGGTGCTGTCTT 59.752 55.000 0.00 0.00 0.00 3.01
82 83 0.687354 ATGTCCTCGGTGCTGTCTTT 59.313 50.000 0.00 0.00 0.00 2.52
83 84 0.249868 TGTCCTCGGTGCTGTCTTTG 60.250 55.000 0.00 0.00 0.00 2.77
84 85 0.951040 GTCCTCGGTGCTGTCTTTGG 60.951 60.000 0.00 0.00 0.00 3.28
85 86 1.118965 TCCTCGGTGCTGTCTTTGGA 61.119 55.000 0.00 0.00 0.00 3.53
86 87 0.671781 CCTCGGTGCTGTCTTTGGAG 60.672 60.000 0.00 0.00 0.00 3.86
87 88 0.318441 CTCGGTGCTGTCTTTGGAGA 59.682 55.000 0.00 0.00 0.00 3.71
88 89 0.976641 TCGGTGCTGTCTTTGGAGAT 59.023 50.000 0.00 0.00 33.70 2.75
89 90 1.081892 CGGTGCTGTCTTTGGAGATG 58.918 55.000 0.00 0.00 33.70 2.90
90 91 1.609061 CGGTGCTGTCTTTGGAGATGT 60.609 52.381 0.00 0.00 33.70 3.06
91 92 2.508526 GGTGCTGTCTTTGGAGATGTT 58.491 47.619 0.00 0.00 33.70 2.71
92 93 2.227388 GGTGCTGTCTTTGGAGATGTTG 59.773 50.000 0.00 0.00 33.70 3.33
93 94 2.227388 GTGCTGTCTTTGGAGATGTTGG 59.773 50.000 0.00 0.00 33.70 3.77
94 95 2.158623 TGCTGTCTTTGGAGATGTTGGT 60.159 45.455 0.00 0.00 33.70 3.67
95 96 2.485814 GCTGTCTTTGGAGATGTTGGTC 59.514 50.000 0.00 0.00 33.70 4.02
96 97 2.738846 CTGTCTTTGGAGATGTTGGTCG 59.261 50.000 0.00 0.00 33.70 4.79
97 98 2.104111 TGTCTTTGGAGATGTTGGTCGT 59.896 45.455 0.00 0.00 33.70 4.34
98 99 2.737252 GTCTTTGGAGATGTTGGTCGTC 59.263 50.000 0.00 0.00 33.70 4.20
99 100 2.632996 TCTTTGGAGATGTTGGTCGTCT 59.367 45.455 0.00 0.00 44.18 4.18
100 101 3.830178 TCTTTGGAGATGTTGGTCGTCTA 59.170 43.478 0.00 0.00 41.88 2.59
101 102 3.868757 TTGGAGATGTTGGTCGTCTAG 57.131 47.619 0.00 0.00 41.88 2.43
102 103 2.803956 TGGAGATGTTGGTCGTCTAGT 58.196 47.619 0.00 0.00 41.88 2.57
103 104 3.162666 TGGAGATGTTGGTCGTCTAGTT 58.837 45.455 0.00 0.00 41.88 2.24
104 105 3.056821 TGGAGATGTTGGTCGTCTAGTTG 60.057 47.826 0.00 0.00 41.88 3.16
105 106 3.056749 GGAGATGTTGGTCGTCTAGTTGT 60.057 47.826 0.00 0.00 41.88 3.32
106 107 4.557205 GAGATGTTGGTCGTCTAGTTGTT 58.443 43.478 0.00 0.00 41.88 2.83
107 108 4.307432 AGATGTTGGTCGTCTAGTTGTTG 58.693 43.478 0.00 0.00 40.25 3.33
108 109 2.206750 TGTTGGTCGTCTAGTTGTTGC 58.793 47.619 0.00 0.00 0.00 4.17
109 110 2.159014 TGTTGGTCGTCTAGTTGTTGCT 60.159 45.455 0.00 0.00 0.00 3.91
110 111 2.870411 GTTGGTCGTCTAGTTGTTGCTT 59.130 45.455 0.00 0.00 0.00 3.91
111 112 2.479837 TGGTCGTCTAGTTGTTGCTTG 58.520 47.619 0.00 0.00 0.00 4.01
112 113 1.798813 GGTCGTCTAGTTGTTGCTTGG 59.201 52.381 0.00 0.00 0.00 3.61
113 114 2.547218 GGTCGTCTAGTTGTTGCTTGGA 60.547 50.000 0.00 0.00 0.00 3.53
114 115 2.475487 GTCGTCTAGTTGTTGCTTGGAC 59.525 50.000 0.00 0.00 0.00 4.02
115 116 2.364324 TCGTCTAGTTGTTGCTTGGACT 59.636 45.455 0.00 0.00 0.00 3.85
116 117 2.476619 CGTCTAGTTGTTGCTTGGACTG 59.523 50.000 0.00 0.00 0.00 3.51
117 118 3.467803 GTCTAGTTGTTGCTTGGACTGT 58.532 45.455 0.00 0.00 0.00 3.55
118 119 3.877508 GTCTAGTTGTTGCTTGGACTGTT 59.122 43.478 0.00 0.00 0.00 3.16
119 120 4.335594 GTCTAGTTGTTGCTTGGACTGTTT 59.664 41.667 0.00 0.00 0.00 2.83
120 121 3.782889 AGTTGTTGCTTGGACTGTTTC 57.217 42.857 0.00 0.00 0.00 2.78
121 122 3.356290 AGTTGTTGCTTGGACTGTTTCT 58.644 40.909 0.00 0.00 0.00 2.52
122 123 3.129287 AGTTGTTGCTTGGACTGTTTCTG 59.871 43.478 0.00 0.00 0.00 3.02
123 124 2.722094 TGTTGCTTGGACTGTTTCTGT 58.278 42.857 0.00 0.00 0.00 3.41
124 125 2.423185 TGTTGCTTGGACTGTTTCTGTG 59.577 45.455 0.00 0.00 0.00 3.66
125 126 1.679139 TGCTTGGACTGTTTCTGTGG 58.321 50.000 0.00 0.00 0.00 4.17
126 127 1.064758 TGCTTGGACTGTTTCTGTGGT 60.065 47.619 0.00 0.00 0.00 4.16
127 128 1.604278 GCTTGGACTGTTTCTGTGGTC 59.396 52.381 0.00 0.00 0.00 4.02
128 129 1.867233 CTTGGACTGTTTCTGTGGTCG 59.133 52.381 0.00 0.00 0.00 4.79
129 130 0.105964 TGGACTGTTTCTGTGGTCGG 59.894 55.000 0.00 0.00 0.00 4.79
130 131 1.228657 GGACTGTTTCTGTGGTCGGC 61.229 60.000 0.00 0.00 0.00 5.54
131 132 1.557443 GACTGTTTCTGTGGTCGGCG 61.557 60.000 0.00 0.00 0.00 6.46
132 133 1.300620 CTGTTTCTGTGGTCGGCGA 60.301 57.895 4.99 4.99 0.00 5.54
133 134 1.284982 CTGTTTCTGTGGTCGGCGAG 61.285 60.000 11.20 0.00 0.00 5.03
134 135 1.300697 GTTTCTGTGGTCGGCGAGT 60.301 57.895 11.20 0.00 0.00 4.18
135 136 0.878961 GTTTCTGTGGTCGGCGAGTT 60.879 55.000 11.20 0.00 0.00 3.01
136 137 0.179067 TTTCTGTGGTCGGCGAGTTT 60.179 50.000 11.20 0.00 0.00 2.66
137 138 0.675083 TTCTGTGGTCGGCGAGTTTA 59.325 50.000 11.20 0.00 0.00 2.01
138 139 0.242825 TCTGTGGTCGGCGAGTTTAG 59.757 55.000 11.20 7.34 0.00 1.85
139 140 0.038526 CTGTGGTCGGCGAGTTTAGT 60.039 55.000 11.20 0.00 0.00 2.24
140 141 0.390124 TGTGGTCGGCGAGTTTAGTT 59.610 50.000 11.20 0.00 0.00 2.24
141 142 1.202557 TGTGGTCGGCGAGTTTAGTTT 60.203 47.619 11.20 0.00 0.00 2.66
142 143 1.193874 GTGGTCGGCGAGTTTAGTTTG 59.806 52.381 11.20 0.00 0.00 2.93
143 144 1.202557 TGGTCGGCGAGTTTAGTTTGT 60.203 47.619 11.20 0.00 0.00 2.83
144 145 1.193874 GGTCGGCGAGTTTAGTTTGTG 59.806 52.381 11.20 0.00 0.00 3.33
145 146 1.862827 GTCGGCGAGTTTAGTTTGTGT 59.137 47.619 11.20 0.00 0.00 3.72
146 147 2.286025 GTCGGCGAGTTTAGTTTGTGTT 59.714 45.455 11.20 0.00 0.00 3.32
147 148 2.937799 TCGGCGAGTTTAGTTTGTGTTT 59.062 40.909 4.99 0.00 0.00 2.83
148 149 3.374678 TCGGCGAGTTTAGTTTGTGTTTT 59.625 39.130 4.99 0.00 0.00 2.43
149 150 3.722289 CGGCGAGTTTAGTTTGTGTTTTC 59.278 43.478 0.00 0.00 0.00 2.29
150 151 4.495184 CGGCGAGTTTAGTTTGTGTTTTCT 60.495 41.667 0.00 0.00 0.00 2.52
151 152 5.276963 CGGCGAGTTTAGTTTGTGTTTTCTA 60.277 40.000 0.00 0.00 0.00 2.10
152 153 6.565247 CGGCGAGTTTAGTTTGTGTTTTCTAT 60.565 38.462 0.00 0.00 0.00 1.98
153 154 6.577427 GGCGAGTTTAGTTTGTGTTTTCTATG 59.423 38.462 0.00 0.00 0.00 2.23
154 155 7.130269 GCGAGTTTAGTTTGTGTTTTCTATGT 58.870 34.615 0.00 0.00 0.00 2.29
155 156 7.642586 GCGAGTTTAGTTTGTGTTTTCTATGTT 59.357 33.333 0.00 0.00 0.00 2.71
156 157 9.498307 CGAGTTTAGTTTGTGTTTTCTATGTTT 57.502 29.630 0.00 0.00 0.00 2.83
158 159 9.581099 AGTTTAGTTTGTGTTTTCTATGTTTGG 57.419 29.630 0.00 0.00 0.00 3.28
159 160 9.361315 GTTTAGTTTGTGTTTTCTATGTTTGGT 57.639 29.630 0.00 0.00 0.00 3.67
160 161 9.930693 TTTAGTTTGTGTTTTCTATGTTTGGTT 57.069 25.926 0.00 0.00 0.00 3.67
161 162 9.930693 TTAGTTTGTGTTTTCTATGTTTGGTTT 57.069 25.926 0.00 0.00 0.00 3.27
162 163 8.250538 AGTTTGTGTTTTCTATGTTTGGTTTG 57.749 30.769 0.00 0.00 0.00 2.93
163 164 7.333174 AGTTTGTGTTTTCTATGTTTGGTTTGG 59.667 33.333 0.00 0.00 0.00 3.28
164 165 5.665459 TGTGTTTTCTATGTTTGGTTTGGG 58.335 37.500 0.00 0.00 0.00 4.12
165 166 5.187967 TGTGTTTTCTATGTTTGGTTTGGGT 59.812 36.000 0.00 0.00 0.00 4.51
166 167 5.751509 GTGTTTTCTATGTTTGGTTTGGGTC 59.248 40.000 0.00 0.00 0.00 4.46
167 168 4.839668 TTTCTATGTTTGGTTTGGGTCG 57.160 40.909 0.00 0.00 0.00 4.79
168 169 3.773418 TCTATGTTTGGTTTGGGTCGA 57.227 42.857 0.00 0.00 0.00 4.20
169 170 3.670625 TCTATGTTTGGTTTGGGTCGAG 58.329 45.455 0.00 0.00 0.00 4.04
170 171 0.958822 ATGTTTGGTTTGGGTCGAGC 59.041 50.000 5.93 5.93 0.00 5.03
171 172 0.394488 TGTTTGGTTTGGGTCGAGCA 60.394 50.000 17.59 0.00 0.00 4.26
172 173 0.958822 GTTTGGTTTGGGTCGAGCAT 59.041 50.000 17.59 0.00 0.00 3.79
173 174 1.068541 GTTTGGTTTGGGTCGAGCATC 60.069 52.381 17.59 0.00 0.00 3.91
174 175 0.400213 TTGGTTTGGGTCGAGCATCT 59.600 50.000 17.59 0.00 0.00 2.90
175 176 0.036388 TGGTTTGGGTCGAGCATCTC 60.036 55.000 17.59 3.94 0.00 2.75
176 177 0.036388 GGTTTGGGTCGAGCATCTCA 60.036 55.000 17.59 1.79 0.00 3.27
177 178 1.407437 GGTTTGGGTCGAGCATCTCAT 60.407 52.381 17.59 0.00 0.00 2.90
178 179 1.667724 GTTTGGGTCGAGCATCTCATG 59.332 52.381 17.59 0.00 0.00 3.07
179 180 0.904649 TTGGGTCGAGCATCTCATGT 59.095 50.000 17.59 0.00 0.00 3.21
180 181 0.461548 TGGGTCGAGCATCTCATGTC 59.538 55.000 17.59 0.00 0.00 3.06
181 182 0.749649 GGGTCGAGCATCTCATGTCT 59.250 55.000 17.59 0.00 0.00 3.41
182 183 1.537776 GGGTCGAGCATCTCATGTCTG 60.538 57.143 17.59 0.00 0.00 3.51
183 184 1.207390 GTCGAGCATCTCATGTCTGC 58.793 55.000 8.27 8.27 36.15 4.26
184 185 0.103755 TCGAGCATCTCATGTCTGCC 59.896 55.000 11.45 5.07 36.56 4.85
185 186 0.104487 CGAGCATCTCATGTCTGCCT 59.896 55.000 11.45 2.63 36.56 4.75
186 187 1.339291 CGAGCATCTCATGTCTGCCTA 59.661 52.381 11.45 0.00 36.56 3.93
187 188 2.753296 GAGCATCTCATGTCTGCCTAC 58.247 52.381 11.45 3.47 36.56 3.18
188 189 2.364970 GAGCATCTCATGTCTGCCTACT 59.635 50.000 11.45 0.00 36.56 2.57
189 190 2.770802 AGCATCTCATGTCTGCCTACTT 59.229 45.455 11.45 0.00 36.56 2.24
190 191 3.129871 GCATCTCATGTCTGCCTACTTC 58.870 50.000 0.00 0.00 0.00 3.01
191 192 3.379240 CATCTCATGTCTGCCTACTTCG 58.621 50.000 0.00 0.00 0.00 3.79
192 193 2.447443 TCTCATGTCTGCCTACTTCGT 58.553 47.619 0.00 0.00 0.00 3.85
193 194 2.164422 TCTCATGTCTGCCTACTTCGTG 59.836 50.000 0.00 0.00 0.00 4.35
194 195 1.002366 CATGTCTGCCTACTTCGTGC 58.998 55.000 0.00 0.00 0.00 5.34
195 196 0.608130 ATGTCTGCCTACTTCGTGCA 59.392 50.000 0.00 0.00 0.00 4.57
196 197 0.319555 TGTCTGCCTACTTCGTGCAC 60.320 55.000 6.82 6.82 0.00 4.57
197 198 1.014564 GTCTGCCTACTTCGTGCACC 61.015 60.000 12.15 0.00 0.00 5.01
198 199 1.005037 CTGCCTACTTCGTGCACCA 60.005 57.895 12.15 0.00 0.00 4.17
199 200 1.291877 CTGCCTACTTCGTGCACCAC 61.292 60.000 12.15 0.00 0.00 4.16
208 209 4.307908 GTGCACCACGTTCACGCC 62.308 66.667 5.22 0.00 44.43 5.68
209 210 4.539083 TGCACCACGTTCACGCCT 62.539 61.111 0.00 0.00 44.43 5.52
210 211 3.712881 GCACCACGTTCACGCCTC 61.713 66.667 0.00 0.00 44.43 4.70
211 212 2.029073 CACCACGTTCACGCCTCT 59.971 61.111 0.00 0.00 44.43 3.69
212 213 1.594293 CACCACGTTCACGCCTCTT 60.594 57.895 0.00 0.00 44.43 2.85
213 214 0.319211 CACCACGTTCACGCCTCTTA 60.319 55.000 0.00 0.00 44.43 2.10
214 215 0.390124 ACCACGTTCACGCCTCTTAA 59.610 50.000 0.00 0.00 44.43 1.85
215 216 1.068474 CCACGTTCACGCCTCTTAAG 58.932 55.000 0.00 0.00 44.43 1.85
216 217 1.604693 CCACGTTCACGCCTCTTAAGT 60.605 52.381 1.63 0.00 44.43 2.24
217 218 1.455786 CACGTTCACGCCTCTTAAGTG 59.544 52.381 1.63 0.00 44.43 3.16
218 219 0.438830 CGTTCACGCCTCTTAAGTGC 59.561 55.000 1.63 6.07 35.97 4.40
226 227 4.631133 CGCCTCTTAAGTGCGTTATATG 57.369 45.455 24.20 4.84 43.12 1.78
227 228 4.049186 CGCCTCTTAAGTGCGTTATATGT 58.951 43.478 24.20 0.00 43.12 2.29
228 229 4.085055 CGCCTCTTAAGTGCGTTATATGTG 60.085 45.833 24.20 4.08 43.12 3.21
229 230 4.809426 GCCTCTTAAGTGCGTTATATGTGT 59.191 41.667 1.63 0.00 0.00 3.72
230 231 5.293569 GCCTCTTAAGTGCGTTATATGTGTT 59.706 40.000 1.63 0.00 0.00 3.32
231 232 6.705782 CCTCTTAAGTGCGTTATATGTGTTG 58.294 40.000 1.63 0.00 0.00 3.33
232 233 6.312918 CCTCTTAAGTGCGTTATATGTGTTGT 59.687 38.462 1.63 0.00 0.00 3.32
233 234 7.490079 CCTCTTAAGTGCGTTATATGTGTTGTA 59.510 37.037 1.63 0.00 0.00 2.41
234 235 8.936070 TCTTAAGTGCGTTATATGTGTTGTAT 57.064 30.769 1.63 0.00 0.00 2.29
235 236 9.027129 TCTTAAGTGCGTTATATGTGTTGTATC 57.973 33.333 1.63 0.00 0.00 2.24
236 237 8.705048 TTAAGTGCGTTATATGTGTTGTATCA 57.295 30.769 0.00 0.00 0.00 2.15
237 238 7.786178 AAGTGCGTTATATGTGTTGTATCAT 57.214 32.000 0.00 0.00 0.00 2.45
238 239 7.408132 AGTGCGTTATATGTGTTGTATCATC 57.592 36.000 0.00 0.00 0.00 2.92
239 240 7.210174 AGTGCGTTATATGTGTTGTATCATCT 58.790 34.615 0.00 0.00 0.00 2.90
240 241 8.357402 AGTGCGTTATATGTGTTGTATCATCTA 58.643 33.333 0.00 0.00 0.00 1.98
241 242 8.425491 GTGCGTTATATGTGTTGTATCATCTAC 58.575 37.037 0.00 0.00 0.00 2.59
242 243 8.357402 TGCGTTATATGTGTTGTATCATCTACT 58.643 33.333 0.00 0.00 0.00 2.57
243 244 8.639428 GCGTTATATGTGTTGTATCATCTACTG 58.361 37.037 0.00 0.00 0.00 2.74
244 245 9.678941 CGTTATATGTGTTGTATCATCTACTGT 57.321 33.333 0.00 0.00 0.00 3.55
249 250 7.696992 TGTGTTGTATCATCTACTGTACTCA 57.303 36.000 0.00 0.00 0.00 3.41
250 251 8.117813 TGTGTTGTATCATCTACTGTACTCAA 57.882 34.615 0.00 0.00 0.00 3.02
251 252 8.749354 TGTGTTGTATCATCTACTGTACTCAAT 58.251 33.333 0.00 0.00 0.00 2.57
252 253 9.239002 GTGTTGTATCATCTACTGTACTCAATC 57.761 37.037 0.00 0.00 0.00 2.67
253 254 9.190317 TGTTGTATCATCTACTGTACTCAATCT 57.810 33.333 0.00 0.00 0.00 2.40
254 255 9.457110 GTTGTATCATCTACTGTACTCAATCTG 57.543 37.037 0.00 0.00 0.00 2.90
255 256 8.980481 TGTATCATCTACTGTACTCAATCTGA 57.020 34.615 0.00 0.00 0.00 3.27
256 257 8.841300 TGTATCATCTACTGTACTCAATCTGAC 58.159 37.037 0.00 0.00 0.00 3.51
257 258 9.062524 GTATCATCTACTGTACTCAATCTGACT 57.937 37.037 0.00 0.00 0.00 3.41
258 259 7.946381 TCATCTACTGTACTCAATCTGACTT 57.054 36.000 0.00 0.00 0.00 3.01
259 260 7.990917 TCATCTACTGTACTCAATCTGACTTC 58.009 38.462 0.00 0.00 0.00 3.01
260 261 7.831690 TCATCTACTGTACTCAATCTGACTTCT 59.168 37.037 0.00 0.00 0.00 2.85
261 262 8.465999 CATCTACTGTACTCAATCTGACTTCTT 58.534 37.037 0.00 0.00 0.00 2.52
262 263 8.046294 TCTACTGTACTCAATCTGACTTCTTC 57.954 38.462 0.00 0.00 0.00 2.87
263 264 6.909550 ACTGTACTCAATCTGACTTCTTCT 57.090 37.500 0.00 0.00 0.00 2.85
264 265 9.168451 CTACTGTACTCAATCTGACTTCTTCTA 57.832 37.037 0.00 0.00 0.00 2.10
265 266 8.588290 ACTGTACTCAATCTGACTTCTTCTAT 57.412 34.615 0.00 0.00 0.00 1.98
266 267 9.030452 ACTGTACTCAATCTGACTTCTTCTATT 57.970 33.333 0.00 0.00 0.00 1.73
292 293 8.958119 AATGAAATGAAATGATATGCAAGCTT 57.042 26.923 0.00 0.00 0.00 3.74
293 294 8.958119 ATGAAATGAAATGATATGCAAGCTTT 57.042 26.923 0.00 0.00 0.00 3.51
294 295 8.415192 TGAAATGAAATGATATGCAAGCTTTC 57.585 30.769 0.00 0.00 0.00 2.62
295 296 7.493320 TGAAATGAAATGATATGCAAGCTTTCC 59.507 33.333 0.00 0.00 0.00 3.13
296 297 5.266733 TGAAATGATATGCAAGCTTTCCC 57.733 39.130 0.00 0.00 0.00 3.97
297 298 4.957954 TGAAATGATATGCAAGCTTTCCCT 59.042 37.500 0.00 0.00 0.00 4.20
298 299 6.128486 TGAAATGATATGCAAGCTTTCCCTA 58.872 36.000 0.00 0.00 0.00 3.53
299 300 6.779049 TGAAATGATATGCAAGCTTTCCCTAT 59.221 34.615 0.00 0.00 0.00 2.57
300 301 7.288389 TGAAATGATATGCAAGCTTTCCCTATT 59.712 33.333 0.00 0.00 0.00 1.73
301 302 7.607615 AATGATATGCAAGCTTTCCCTATTT 57.392 32.000 0.00 0.00 0.00 1.40
302 303 6.395426 TGATATGCAAGCTTTCCCTATTTG 57.605 37.500 0.00 0.00 0.00 2.32
303 304 3.531934 ATGCAAGCTTTCCCTATTTGC 57.468 42.857 0.00 0.00 43.21 3.68
304 305 1.202114 TGCAAGCTTTCCCTATTTGCG 59.798 47.619 0.00 0.00 45.20 4.85
305 306 1.472480 GCAAGCTTTCCCTATTTGCGA 59.528 47.619 0.00 0.00 35.39 5.10
306 307 2.094752 GCAAGCTTTCCCTATTTGCGAA 60.095 45.455 0.00 0.00 35.39 4.70
307 308 3.613910 GCAAGCTTTCCCTATTTGCGAAA 60.614 43.478 0.00 0.00 35.39 3.46
308 309 4.555262 CAAGCTTTCCCTATTTGCGAAAA 58.445 39.130 0.00 0.00 0.00 2.29
309 310 4.864704 AGCTTTCCCTATTTGCGAAAAA 57.135 36.364 0.00 0.00 0.00 1.94
310 311 5.405935 AGCTTTCCCTATTTGCGAAAAAT 57.594 34.783 0.00 0.00 0.00 1.82
311 312 6.524101 AGCTTTCCCTATTTGCGAAAAATA 57.476 33.333 0.00 0.00 0.00 1.40
312 313 6.930731 AGCTTTCCCTATTTGCGAAAAATAA 58.069 32.000 0.00 0.00 0.00 1.40
313 314 7.555965 AGCTTTCCCTATTTGCGAAAAATAAT 58.444 30.769 0.00 0.00 0.00 1.28
314 315 8.691797 AGCTTTCCCTATTTGCGAAAAATAATA 58.308 29.630 0.00 0.00 0.00 0.98
315 316 9.308318 GCTTTCCCTATTTGCGAAAAATAATAA 57.692 29.630 0.00 0.00 0.00 1.40
319 320 9.255304 TCCCTATTTGCGAAAAATAATAATTGC 57.745 29.630 0.00 0.00 0.00 3.56
320 321 9.260002 CCCTATTTGCGAAAAATAATAATTGCT 57.740 29.630 0.00 0.00 0.00 3.91
362 363 8.856490 ATTCTTAAATTAATCGTGACATTGCC 57.144 30.769 0.00 0.00 0.00 4.52
363 364 7.624360 TCTTAAATTAATCGTGACATTGCCT 57.376 32.000 0.00 0.00 0.00 4.75
364 365 7.471721 TCTTAAATTAATCGTGACATTGCCTG 58.528 34.615 0.00 0.00 0.00 4.85
365 366 5.895636 AAATTAATCGTGACATTGCCTGA 57.104 34.783 0.00 0.00 0.00 3.86
366 367 6.455360 AAATTAATCGTGACATTGCCTGAT 57.545 33.333 0.00 0.00 0.00 2.90
367 368 6.455360 AATTAATCGTGACATTGCCTGATT 57.545 33.333 0.00 0.00 0.00 2.57
368 369 7.566760 AATTAATCGTGACATTGCCTGATTA 57.433 32.000 0.00 0.00 0.00 1.75
369 370 7.750229 ATTAATCGTGACATTGCCTGATTAT 57.250 32.000 0.00 0.00 30.86 1.28
370 371 7.566760 TTAATCGTGACATTGCCTGATTATT 57.433 32.000 0.00 0.00 30.86 1.40
371 372 5.679734 ATCGTGACATTGCCTGATTATTC 57.320 39.130 0.00 0.00 0.00 1.75
372 373 4.512484 TCGTGACATTGCCTGATTATTCA 58.488 39.130 0.00 0.00 0.00 2.57
373 374 4.940654 TCGTGACATTGCCTGATTATTCAA 59.059 37.500 0.00 0.00 0.00 2.69
374 375 5.030295 CGTGACATTGCCTGATTATTCAAC 58.970 41.667 0.00 0.00 0.00 3.18
375 376 5.030295 GTGACATTGCCTGATTATTCAACG 58.970 41.667 0.00 0.00 0.00 4.10
376 377 4.032703 ACATTGCCTGATTATTCAACGC 57.967 40.909 0.00 1.30 0.00 4.84
377 378 3.696051 ACATTGCCTGATTATTCAACGCT 59.304 39.130 7.48 0.00 31.53 5.07
378 379 4.881273 ACATTGCCTGATTATTCAACGCTA 59.119 37.500 7.48 2.32 31.53 4.26
379 380 5.008019 ACATTGCCTGATTATTCAACGCTAG 59.992 40.000 7.48 0.00 31.53 3.42
380 381 2.872245 TGCCTGATTATTCAACGCTAGC 59.128 45.455 4.06 4.06 31.53 3.42
381 382 3.134458 GCCTGATTATTCAACGCTAGCT 58.866 45.455 13.93 0.00 0.00 3.32
382 383 3.059325 GCCTGATTATTCAACGCTAGCTG 60.059 47.826 13.93 9.03 0.00 4.24
383 384 3.059325 CCTGATTATTCAACGCTAGCTGC 60.059 47.826 13.93 0.00 38.57 5.25
392 393 2.998667 GCTAGCTGCGTACTTGCG 59.001 61.111 7.70 0.00 37.81 4.85
393 394 1.516386 GCTAGCTGCGTACTTGCGA 60.516 57.895 7.70 0.00 37.81 5.10
394 395 1.743855 GCTAGCTGCGTACTTGCGAC 61.744 60.000 7.70 0.00 37.81 5.19
395 396 0.179161 CTAGCTGCGTACTTGCGACT 60.179 55.000 0.00 0.00 37.81 4.18
396 397 0.456142 TAGCTGCGTACTTGCGACTG 60.456 55.000 0.00 0.00 37.81 3.51
397 398 2.772189 CTGCGTACTTGCGACTGC 59.228 61.111 0.00 0.00 43.20 4.40
420 421 4.767255 CTGGCCTGGGTGAGCGAC 62.767 72.222 3.32 0.00 0.00 5.19
440 441 2.493973 GCAGAGGAGCCAGACGAG 59.506 66.667 0.00 0.00 0.00 4.18
441 442 3.074999 GCAGAGGAGCCAGACGAGG 62.075 68.421 0.00 0.00 0.00 4.63
480 481 4.773117 GTGGAGACGACGACGCCC 62.773 72.222 16.19 10.37 43.96 6.13
483 484 4.808238 GAGACGACGACGCCCGAC 62.808 72.222 15.53 10.11 43.96 4.79
501 502 4.421479 AGCTCCGTCCGCTGTTCG 62.421 66.667 0.00 0.00 36.15 3.95
502 503 4.415332 GCTCCGTCCGCTGTTCGA 62.415 66.667 0.00 0.00 41.67 3.71
503 504 2.504244 CTCCGTCCGCTGTTCGAC 60.504 66.667 0.00 0.00 41.67 4.20
504 505 3.966026 CTCCGTCCGCTGTTCGACC 62.966 68.421 0.00 0.00 41.67 4.79
505 506 4.052229 CCGTCCGCTGTTCGACCT 62.052 66.667 0.00 0.00 41.67 3.85
506 507 2.504244 CGTCCGCTGTTCGACCTC 60.504 66.667 0.00 0.00 41.67 3.85
507 508 2.504244 GTCCGCTGTTCGACCTCG 60.504 66.667 0.00 0.00 41.67 4.63
516 517 2.903855 TCGACCTCGATACGGGCC 60.904 66.667 0.00 0.00 44.22 5.80
517 518 4.323843 CGACCTCGATACGGGCCG 62.324 72.222 27.06 27.06 43.02 6.13
518 519 4.642542 GACCTCGATACGGGCCGC 62.643 72.222 28.71 9.18 0.00 6.53
520 521 4.215742 CCTCGATACGGGCCGCAA 62.216 66.667 28.71 15.79 0.00 4.85
521 522 2.029073 CTCGATACGGGCCGCAAT 59.971 61.111 28.71 20.35 0.00 3.56
522 523 2.022129 CTCGATACGGGCCGCAATC 61.022 63.158 28.71 26.07 0.00 2.67
523 524 3.041940 CGATACGGGCCGCAATCC 61.042 66.667 28.71 10.04 0.00 3.01
524 525 2.668550 GATACGGGCCGCAATCCC 60.669 66.667 28.71 5.34 40.43 3.85
535 536 4.460683 CAATCCCGACCGCCCGAA 62.461 66.667 0.00 0.00 0.00 4.30
536 537 3.476419 AATCCCGACCGCCCGAAT 61.476 61.111 0.00 0.00 0.00 3.34
537 538 3.456105 AATCCCGACCGCCCGAATC 62.456 63.158 0.00 0.00 0.00 2.52
582 583 2.874751 CGCGCCGGAAAAGGAAAT 59.125 55.556 5.05 0.00 0.00 2.17
583 584 2.091533 CGCGCCGGAAAAGGAAATA 58.908 52.632 5.05 0.00 0.00 1.40
584 585 0.247934 CGCGCCGGAAAAGGAAATAC 60.248 55.000 5.05 0.00 0.00 1.89
585 586 1.092348 GCGCCGGAAAAGGAAATACT 58.908 50.000 5.05 0.00 0.00 2.12
586 587 1.063616 GCGCCGGAAAAGGAAATACTC 59.936 52.381 5.05 0.00 0.00 2.59
587 588 2.629051 CGCCGGAAAAGGAAATACTCT 58.371 47.619 5.05 0.00 0.00 3.24
588 589 2.608090 CGCCGGAAAAGGAAATACTCTC 59.392 50.000 5.05 0.00 0.00 3.20
589 590 3.679083 CGCCGGAAAAGGAAATACTCTCT 60.679 47.826 5.05 0.00 0.00 3.10
590 591 4.441079 CGCCGGAAAAGGAAATACTCTCTA 60.441 45.833 5.05 0.00 0.00 2.43
591 592 5.425630 GCCGGAAAAGGAAATACTCTCTAA 58.574 41.667 5.05 0.00 0.00 2.10
592 593 5.878669 GCCGGAAAAGGAAATACTCTCTAAA 59.121 40.000 5.05 0.00 0.00 1.85
593 594 6.542735 GCCGGAAAAGGAAATACTCTCTAAAT 59.457 38.462 5.05 0.00 0.00 1.40
690 2266 2.098607 TGTCAGGCTCCGTAATCGTTAG 59.901 50.000 0.00 0.00 35.01 2.34
1021 2599 1.022451 GGCCGTGATAAAGGTGCGAA 61.022 55.000 0.00 0.00 0.00 4.70
1339 2921 9.575868 TGTATTTGGTGTTTTAGATCTTACCAA 57.424 29.630 17.10 17.10 43.99 3.67
1365 2947 4.955925 TTGTACAGTGTTGGTCAAACTG 57.044 40.909 0.00 16.65 45.46 3.16
1457 3043 8.911247 AAAATGTGACTACAGAAAACAACTTC 57.089 30.769 0.00 0.00 40.79 3.01
1670 3302 8.528044 TTAACTAGTTCCCAGATTTTGTGTTT 57.472 30.769 12.39 0.00 0.00 2.83
1696 3328 0.535335 TGCTGGTCTACTTAAGCCCG 59.465 55.000 1.29 0.00 34.70 6.13
1806 3438 3.334691 TCTACAATCAAGTTTCAGCGGG 58.665 45.455 0.00 0.00 0.00 6.13
1948 3580 6.999272 ACAGGTATTGGTTGTGTAATGTTGTA 59.001 34.615 0.00 0.00 0.00 2.41
1949 3581 7.040961 ACAGGTATTGGTTGTGTAATGTTGTAC 60.041 37.037 0.00 0.00 0.00 2.90
1950 3582 7.174253 CAGGTATTGGTTGTGTAATGTTGTACT 59.826 37.037 0.00 0.00 0.00 2.73
1991 3623 4.778534 AGCAACAGATTCCATGTTTCTG 57.221 40.909 12.65 12.65 38.80 3.02
2011 3643 6.072112 TCTGCAACCAAACTAATGAAACTC 57.928 37.500 0.00 0.00 0.00 3.01
2030 3662 1.806542 TCGGAATGCTGCACTTTTCTC 59.193 47.619 3.57 0.00 0.00 2.87
2103 3735 4.894784 TCACTATGTCCAGAAGTTGTTCC 58.105 43.478 0.00 0.00 32.48 3.62
2104 3736 3.679980 CACTATGTCCAGAAGTTGTTCCG 59.320 47.826 0.00 0.00 32.48 4.30
2105 3737 2.930826 ATGTCCAGAAGTTGTTCCGT 57.069 45.000 0.00 0.00 32.48 4.69
2106 3738 1.948104 TGTCCAGAAGTTGTTCCGTG 58.052 50.000 0.00 0.00 32.48 4.94
2107 3739 1.483004 TGTCCAGAAGTTGTTCCGTGA 59.517 47.619 0.00 0.00 32.48 4.35
2108 3740 2.104111 TGTCCAGAAGTTGTTCCGTGAT 59.896 45.455 0.00 0.00 32.48 3.06
2109 3741 3.139077 GTCCAGAAGTTGTTCCGTGATT 58.861 45.455 0.00 0.00 32.48 2.57
2110 3742 3.186613 GTCCAGAAGTTGTTCCGTGATTC 59.813 47.826 0.00 0.00 32.48 2.52
2111 3743 3.138304 CCAGAAGTTGTTCCGTGATTCA 58.862 45.455 0.00 0.00 32.48 2.57
2112 3744 3.187227 CCAGAAGTTGTTCCGTGATTCAG 59.813 47.826 0.00 0.00 32.48 3.02
2113 3745 2.808543 AGAAGTTGTTCCGTGATTCAGC 59.191 45.455 0.00 0.00 32.48 4.26
2114 3746 1.523758 AGTTGTTCCGTGATTCAGCC 58.476 50.000 0.00 0.00 0.00 4.85
2115 3747 0.521735 GTTGTTCCGTGATTCAGCCC 59.478 55.000 0.00 0.00 0.00 5.19
2116 3748 0.608035 TTGTTCCGTGATTCAGCCCC 60.608 55.000 0.00 0.00 0.00 5.80
2117 3749 1.002624 GTTCCGTGATTCAGCCCCA 60.003 57.895 0.00 0.00 0.00 4.96
2118 3750 1.002624 TTCCGTGATTCAGCCCCAC 60.003 57.895 0.00 0.00 0.00 4.61
2119 3751 2.438434 CCGTGATTCAGCCCCACC 60.438 66.667 0.00 0.00 0.00 4.61
2120 3752 2.350895 CGTGATTCAGCCCCACCA 59.649 61.111 0.00 0.00 0.00 4.17
2559 4191 7.039722 TCAGGAAAAGGGGTTATATTTCTGT 57.960 36.000 0.00 0.00 33.42 3.41
2716 4348 8.728337 TTATGTCAGAAGAGATGAAGAAATGG 57.272 34.615 0.00 0.00 0.00 3.16
2883 4516 2.159707 AGAAATTTTGACGATCGTGCCG 60.160 45.455 28.12 0.00 0.00 5.69
2912 4548 5.282055 ACATATACATATCCCCTCGCATG 57.718 43.478 0.00 0.00 0.00 4.06
2914 4550 0.246360 TACATATCCCCTCGCATGCG 59.754 55.000 33.61 33.61 41.35 4.73
2932 4568 3.669536 TGCGAACCATCTGTGTCAAATA 58.330 40.909 0.00 0.00 0.00 1.40
2996 4632 0.105778 TGACATCGAGCACACCAACA 59.894 50.000 0.00 0.00 0.00 3.33
3002 4638 2.896801 GAGCACACCAACACCGCAG 61.897 63.158 0.00 0.00 0.00 5.18
3026 4662 4.023792 TCGATGATGATGTGCTTATTTGCC 60.024 41.667 0.00 0.00 0.00 4.52
3029 4665 6.128090 CGATGATGATGTGCTTATTTGCCTAT 60.128 38.462 0.00 0.00 0.00 2.57
3035 4671 3.871006 TGTGCTTATTTGCCTATCTGTCG 59.129 43.478 0.00 0.00 0.00 4.35
3053 4689 1.210967 TCGGGAAAGGTGTTGTTGAGT 59.789 47.619 0.00 0.00 0.00 3.41
3118 4754 1.676678 ATGCGCGTATGTCAGGACCT 61.677 55.000 9.48 0.00 0.00 3.85
3120 4756 0.101759 GCGCGTATGTCAGGACCTTA 59.898 55.000 8.43 0.00 0.00 2.69
3221 4857 7.699878 ACTCCCTCCATTTTTATTTACTCTGT 58.300 34.615 0.00 0.00 0.00 3.41
3768 5480 7.278646 GTCCCATTGCAGAAAATAAGAATTTCC 59.721 37.037 0.00 0.00 37.47 3.13
3783 5495 4.227527 AGAATTTCCGGTCCTCACCTTTAT 59.772 41.667 0.00 0.00 41.17 1.40
3883 5595 7.697691 ACCTGATCAAATTTTAATCTACTGCG 58.302 34.615 0.00 0.00 0.00 5.18
3912 5624 7.009179 TGTTGATTCTCCTACTTTGATCAGT 57.991 36.000 0.00 0.00 0.00 3.41
3953 5665 2.627699 TCCATTTGTCTTGGTTTCTGGC 59.372 45.455 0.00 0.00 35.64 4.85
4176 5888 1.004560 CTCAGCCGGCAGAAACAGA 60.005 57.895 31.54 12.84 0.00 3.41
4181 5893 2.664851 CGGCAGAAACAGACCGCA 60.665 61.111 0.00 0.00 39.08 5.69
4237 5949 1.671054 CTTGTTCCCGCGTCCACAT 60.671 57.895 4.92 0.00 0.00 3.21
4307 6020 2.489971 CACCTTGCCGTGTAGAGAAAA 58.510 47.619 0.00 0.00 0.00 2.29
4316 6029 2.921754 CGTGTAGAGAAAACCATCGGTC 59.078 50.000 0.00 0.00 33.12 4.79
4361 6074 5.405797 TCATGTCATCTCGAGAAGAACAAG 58.594 41.667 20.99 18.79 37.61 3.16
4375 6088 7.150783 AGAAGAACAAGAGGAAATGTTATGC 57.849 36.000 0.00 0.00 39.73 3.14
4381 6094 1.683385 GAGGAAATGTTATGCAGCCCC 59.317 52.381 0.00 0.00 0.00 5.80
4390 6103 1.762708 TATGCAGCCCCTTGTTAAGC 58.237 50.000 0.00 0.00 0.00 3.09
4398 6111 4.035208 CAGCCCCTTGTTAAGCTTAATACG 59.965 45.833 21.28 15.72 31.93 3.06
4399 6112 3.943381 GCCCCTTGTTAAGCTTAATACGT 59.057 43.478 21.28 0.00 0.00 3.57
4400 6113 5.104817 AGCCCCTTGTTAAGCTTAATACGTA 60.105 40.000 21.28 0.00 29.27 3.57
4401 6114 5.007039 GCCCCTTGTTAAGCTTAATACGTAC 59.993 44.000 21.28 9.22 0.00 3.67
4402 6115 6.343703 CCCCTTGTTAAGCTTAATACGTACT 58.656 40.000 21.28 0.00 0.00 2.73
4403 6116 6.478016 CCCCTTGTTAAGCTTAATACGTACTC 59.522 42.308 21.28 7.15 0.00 2.59
4404 6117 6.478016 CCCTTGTTAAGCTTAATACGTACTCC 59.522 42.308 21.28 6.48 0.00 3.85
4405 6118 6.478016 CCTTGTTAAGCTTAATACGTACTCCC 59.522 42.308 21.28 5.80 0.00 4.30
4406 6119 6.780457 TGTTAAGCTTAATACGTACTCCCT 57.220 37.500 21.28 0.00 0.00 4.20
4407 6120 6.799512 TGTTAAGCTTAATACGTACTCCCTC 58.200 40.000 21.28 5.14 0.00 4.30
4408 6121 4.933505 AAGCTTAATACGTACTCCCTCC 57.066 45.455 0.00 0.00 0.00 4.30
4409 6122 2.883386 AGCTTAATACGTACTCCCTCCG 59.117 50.000 0.00 0.00 0.00 4.63
4410 6123 2.620585 GCTTAATACGTACTCCCTCCGT 59.379 50.000 0.00 0.00 38.53 4.69
4411 6124 3.067320 GCTTAATACGTACTCCCTCCGTT 59.933 47.826 0.00 0.00 36.12 4.44
4412 6125 4.791088 GCTTAATACGTACTCCCTCCGTTC 60.791 50.000 0.00 0.00 36.12 3.95
4413 6126 2.725221 ATACGTACTCCCTCCGTTCT 57.275 50.000 0.00 0.00 36.12 3.01
4414 6127 3.845781 ATACGTACTCCCTCCGTTCTA 57.154 47.619 0.00 0.00 36.12 2.10
4415 6128 2.725221 ACGTACTCCCTCCGTTCTAT 57.275 50.000 0.00 0.00 0.00 1.98
4416 6129 3.010200 ACGTACTCCCTCCGTTCTATT 57.990 47.619 0.00 0.00 0.00 1.73
4417 6130 3.359950 ACGTACTCCCTCCGTTCTATTT 58.640 45.455 0.00 0.00 0.00 1.40
4418 6131 3.766051 ACGTACTCCCTCCGTTCTATTTT 59.234 43.478 0.00 0.00 0.00 1.82
4419 6132 4.110482 CGTACTCCCTCCGTTCTATTTTG 58.890 47.826 0.00 0.00 0.00 2.44
4420 6133 4.142315 CGTACTCCCTCCGTTCTATTTTGA 60.142 45.833 0.00 0.00 0.00 2.69
4421 6134 4.903045 ACTCCCTCCGTTCTATTTTGAA 57.097 40.909 0.00 0.00 0.00 2.69
4422 6135 5.237236 ACTCCCTCCGTTCTATTTTGAAA 57.763 39.130 0.00 0.00 0.00 2.69
4423 6136 5.001874 ACTCCCTCCGTTCTATTTTGAAAC 58.998 41.667 0.00 0.00 0.00 2.78
4424 6137 3.998341 TCCCTCCGTTCTATTTTGAAACG 59.002 43.478 0.00 0.00 0.00 3.60
4425 6138 3.126343 CCCTCCGTTCTATTTTGAAACGG 59.874 47.826 17.31 17.31 39.53 4.44
4426 6139 3.998341 CCTCCGTTCTATTTTGAAACGGA 59.002 43.478 22.61 22.61 41.90 4.69
4427 6140 5.204673 CTCCGTTCTATTTTGAAACGGAG 57.795 43.478 29.95 29.95 46.81 4.63
4428 6141 3.998341 TCCGTTCTATTTTGAAACGGAGG 59.002 43.478 20.88 0.96 40.71 4.30
4429 6142 3.126343 CCGTTCTATTTTGAAACGGAGGG 59.874 47.826 18.29 0.00 40.02 4.30
4430 6143 3.998341 CGTTCTATTTTGAAACGGAGGGA 59.002 43.478 0.00 0.00 0.00 4.20
4468 6181 2.254546 TTGGTTGGCTAGACACACTG 57.745 50.000 0.00 0.00 0.00 3.66
4469 6182 1.128200 TGGTTGGCTAGACACACTGT 58.872 50.000 0.00 0.00 0.00 3.55
4487 6200 5.874810 ACACTGTATAACATGACAATTCGCT 59.125 36.000 0.00 0.00 0.00 4.93
4532 6245 4.466726 GGAAACCCGCTCTATATATCCTGT 59.533 45.833 0.00 0.00 0.00 4.00
4533 6246 5.046520 GGAAACCCGCTCTATATATCCTGTT 60.047 44.000 0.00 0.00 0.00 3.16
4534 6247 6.435292 AAACCCGCTCTATATATCCTGTTT 57.565 37.500 0.00 0.00 0.00 2.83
4588 6305 4.525912 AAAATGCCATGACAGGAACTTC 57.474 40.909 0.00 0.00 34.60 3.01
4593 6310 4.922206 TGCCATGACAGGAACTTCTATTT 58.078 39.130 0.00 0.00 34.60 1.40
4616 6333 5.774878 AACTATTTCTACGGCGAAAACTC 57.225 39.130 16.62 0.00 36.57 3.01
4692 6415 4.809958 TGCCATTTGTGTTGAATGAAAGTG 59.190 37.500 0.00 0.00 36.78 3.16
4712 6435 9.388506 GAAAGTGAAGATTCTTCCATCAAGATA 57.611 33.333 20.87 0.00 41.02 1.98
4769 6493 3.165071 AGCGGGAATTTCCAAATCAAGT 58.835 40.909 17.08 0.00 38.64 3.16
4770 6494 4.340617 AGCGGGAATTTCCAAATCAAGTA 58.659 39.130 17.08 0.00 38.64 2.24
4803 6791 8.836268 ACTGTAATACGTCCTCAAACAAATAA 57.164 30.769 0.00 0.00 0.00 1.40
4843 6831 8.233349 AGGGAGTAGTATATTAGGATCACAGA 57.767 38.462 0.00 0.00 0.00 3.41
4847 6835 9.796120 GAGTAGTATATTAGGATCACAGAATGC 57.204 37.037 0.00 0.00 42.53 3.56
5021 7012 6.471233 AACTTTCAAGGAGAAGAAAAAGGG 57.529 37.500 0.00 0.00 37.57 3.95
5107 7099 3.372206 CACATGAATTTCTCCGACCTGAC 59.628 47.826 0.00 0.00 0.00 3.51
5142 7134 4.116238 CAGCCTACAAGAAGCTAGCTAAC 58.884 47.826 19.70 15.17 34.38 2.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.126071 ATCACCAAGACGCCGTCG 60.126 61.111 12.13 0.00 37.67 5.12
9 10 0.949105 AACATCACCAAGACGCCGTC 60.949 55.000 9.71 9.71 0.00 4.79
10 11 0.949105 GAACATCACCAAGACGCCGT 60.949 55.000 0.00 0.00 0.00 5.68
11 12 0.670546 AGAACATCACCAAGACGCCG 60.671 55.000 0.00 0.00 0.00 6.46
12 13 1.079503 GAGAACATCACCAAGACGCC 58.920 55.000 0.00 0.00 0.00 5.68
13 14 2.086054 AGAGAACATCACCAAGACGC 57.914 50.000 0.00 0.00 0.00 5.19
14 15 3.121944 CGAAAGAGAACATCACCAAGACG 59.878 47.826 0.00 0.00 0.00 4.18
15 16 4.058817 ACGAAAGAGAACATCACCAAGAC 58.941 43.478 0.00 0.00 0.00 3.01
16 17 4.058124 CACGAAAGAGAACATCACCAAGA 58.942 43.478 0.00 0.00 0.00 3.02
17 18 4.058124 TCACGAAAGAGAACATCACCAAG 58.942 43.478 0.00 0.00 0.00 3.61
18 19 4.066646 TCACGAAAGAGAACATCACCAA 57.933 40.909 0.00 0.00 0.00 3.67
19 20 3.744238 TCACGAAAGAGAACATCACCA 57.256 42.857 0.00 0.00 0.00 4.17
20 21 3.433615 CCTTCACGAAAGAGAACATCACC 59.566 47.826 0.00 0.00 35.78 4.02
21 22 3.120511 GCCTTCACGAAAGAGAACATCAC 60.121 47.826 0.00 0.00 35.78 3.06
22 23 3.067106 GCCTTCACGAAAGAGAACATCA 58.933 45.455 0.00 0.00 35.78 3.07
23 24 2.092838 CGCCTTCACGAAAGAGAACATC 59.907 50.000 0.00 0.00 35.78 3.06
24 25 2.069273 CGCCTTCACGAAAGAGAACAT 58.931 47.619 0.00 0.00 35.78 2.71
25 26 1.497991 CGCCTTCACGAAAGAGAACA 58.502 50.000 0.00 0.00 35.78 3.18
26 27 0.164002 GCGCCTTCACGAAAGAGAAC 59.836 55.000 0.00 0.00 35.78 3.01
27 28 0.033504 AGCGCCTTCACGAAAGAGAA 59.966 50.000 2.29 0.00 38.36 2.87
28 29 0.667487 CAGCGCCTTCACGAAAGAGA 60.667 55.000 2.29 0.00 37.12 3.10
29 30 0.946221 ACAGCGCCTTCACGAAAGAG 60.946 55.000 2.29 0.00 37.12 2.85
30 31 0.944311 GACAGCGCCTTCACGAAAGA 60.944 55.000 2.29 0.00 37.12 2.52
31 32 0.946221 AGACAGCGCCTTCACGAAAG 60.946 55.000 2.29 0.00 34.06 2.62
32 33 0.531974 AAGACAGCGCCTTCACGAAA 60.532 50.000 2.29 0.00 34.06 3.46
33 34 1.069090 AAGACAGCGCCTTCACGAA 59.931 52.632 2.29 0.00 34.06 3.85
34 35 1.664649 CAAGACAGCGCCTTCACGA 60.665 57.895 2.29 0.00 34.06 4.35
35 36 0.666274 TACAAGACAGCGCCTTCACG 60.666 55.000 2.29 0.00 0.00 4.35
36 37 1.726853 ATACAAGACAGCGCCTTCAC 58.273 50.000 2.29 0.00 0.00 3.18
37 38 2.028112 AGAATACAAGACAGCGCCTTCA 60.028 45.455 2.29 0.00 0.00 3.02
38 39 2.605366 GAGAATACAAGACAGCGCCTTC 59.395 50.000 2.29 0.00 0.00 3.46
39 40 2.622436 GAGAATACAAGACAGCGCCTT 58.378 47.619 2.29 0.00 0.00 4.35
40 41 1.469940 CGAGAATACAAGACAGCGCCT 60.470 52.381 2.29 0.00 0.00 5.52
41 42 0.924090 CGAGAATACAAGACAGCGCC 59.076 55.000 2.29 0.00 0.00 6.53
42 43 0.299003 GCGAGAATACAAGACAGCGC 59.701 55.000 0.00 0.00 36.35 5.92
43 44 0.567968 CGCGAGAATACAAGACAGCG 59.432 55.000 0.00 0.00 40.37 5.18
44 45 1.909376 TCGCGAGAATACAAGACAGC 58.091 50.000 3.71 0.00 37.03 4.40
48 49 6.545130 CGAGGACATCGCGAGAATACAAGA 62.545 50.000 16.66 0.00 45.98 3.02
49 50 4.387077 CGAGGACATCGCGAGAATACAAG 61.387 52.174 16.66 0.00 45.98 3.16
50 51 2.540973 CGAGGACATCGCGAGAATACAA 60.541 50.000 16.66 0.00 45.98 2.41
51 52 1.002792 CGAGGACATCGCGAGAATACA 60.003 52.381 16.66 0.00 45.98 2.29
52 53 1.676057 CGAGGACATCGCGAGAATAC 58.324 55.000 16.66 2.67 45.98 1.89
62 63 0.247736 AAGACAGCACCGAGGACATC 59.752 55.000 0.00 0.00 0.00 3.06
63 64 0.687354 AAAGACAGCACCGAGGACAT 59.313 50.000 0.00 0.00 0.00 3.06
64 65 0.249868 CAAAGACAGCACCGAGGACA 60.250 55.000 0.00 0.00 0.00 4.02
65 66 0.951040 CCAAAGACAGCACCGAGGAC 60.951 60.000 0.00 0.00 0.00 3.85
66 67 1.118965 TCCAAAGACAGCACCGAGGA 61.119 55.000 0.00 0.00 0.00 3.71
67 68 0.671781 CTCCAAAGACAGCACCGAGG 60.672 60.000 0.00 0.00 0.00 4.63
68 69 0.318441 TCTCCAAAGACAGCACCGAG 59.682 55.000 0.00 0.00 0.00 4.63
69 70 0.976641 ATCTCCAAAGACAGCACCGA 59.023 50.000 0.00 0.00 33.32 4.69
70 71 1.081892 CATCTCCAAAGACAGCACCG 58.918 55.000 0.00 0.00 33.32 4.94
71 72 2.191128 ACATCTCCAAAGACAGCACC 57.809 50.000 0.00 0.00 33.32 5.01
72 73 2.227388 CCAACATCTCCAAAGACAGCAC 59.773 50.000 0.00 0.00 33.32 4.40
73 74 2.158623 ACCAACATCTCCAAAGACAGCA 60.159 45.455 0.00 0.00 33.32 4.41
74 75 2.485814 GACCAACATCTCCAAAGACAGC 59.514 50.000 0.00 0.00 33.32 4.40
75 76 2.738846 CGACCAACATCTCCAAAGACAG 59.261 50.000 0.00 0.00 33.32 3.51
76 77 2.104111 ACGACCAACATCTCCAAAGACA 59.896 45.455 0.00 0.00 33.32 3.41
77 78 2.737252 GACGACCAACATCTCCAAAGAC 59.263 50.000 0.00 0.00 33.32 3.01
78 79 2.632996 AGACGACCAACATCTCCAAAGA 59.367 45.455 0.00 0.00 35.54 2.52
79 80 3.045601 AGACGACCAACATCTCCAAAG 57.954 47.619 0.00 0.00 0.00 2.77
80 81 3.576982 ACTAGACGACCAACATCTCCAAA 59.423 43.478 0.00 0.00 0.00 3.28
81 82 3.162666 ACTAGACGACCAACATCTCCAA 58.837 45.455 0.00 0.00 0.00 3.53
82 83 2.803956 ACTAGACGACCAACATCTCCA 58.196 47.619 0.00 0.00 0.00 3.86
83 84 3.056749 ACAACTAGACGACCAACATCTCC 60.057 47.826 0.00 0.00 0.00 3.71
84 85 4.175787 ACAACTAGACGACCAACATCTC 57.824 45.455 0.00 0.00 0.00 2.75
85 86 4.307432 CAACAACTAGACGACCAACATCT 58.693 43.478 0.00 0.00 0.00 2.90
86 87 3.120649 GCAACAACTAGACGACCAACATC 60.121 47.826 0.00 0.00 0.00 3.06
87 88 2.806244 GCAACAACTAGACGACCAACAT 59.194 45.455 0.00 0.00 0.00 2.71
88 89 2.159014 AGCAACAACTAGACGACCAACA 60.159 45.455 0.00 0.00 0.00 3.33
89 90 2.480845 AGCAACAACTAGACGACCAAC 58.519 47.619 0.00 0.00 0.00 3.77
90 91 2.869801 CAAGCAACAACTAGACGACCAA 59.130 45.455 0.00 0.00 0.00 3.67
91 92 2.479837 CAAGCAACAACTAGACGACCA 58.520 47.619 0.00 0.00 0.00 4.02
92 93 1.798813 CCAAGCAACAACTAGACGACC 59.201 52.381 0.00 0.00 0.00 4.79
93 94 2.475487 GTCCAAGCAACAACTAGACGAC 59.525 50.000 0.00 0.00 0.00 4.34
94 95 2.364324 AGTCCAAGCAACAACTAGACGA 59.636 45.455 0.00 0.00 31.57 4.20
95 96 2.476619 CAGTCCAAGCAACAACTAGACG 59.523 50.000 0.00 0.00 31.57 4.18
96 97 3.467803 ACAGTCCAAGCAACAACTAGAC 58.532 45.455 0.00 0.00 0.00 2.59
97 98 3.838244 ACAGTCCAAGCAACAACTAGA 57.162 42.857 0.00 0.00 0.00 2.43
98 99 4.576463 AGAAACAGTCCAAGCAACAACTAG 59.424 41.667 0.00 0.00 0.00 2.57
99 100 4.335315 CAGAAACAGTCCAAGCAACAACTA 59.665 41.667 0.00 0.00 0.00 2.24
100 101 3.129287 CAGAAACAGTCCAAGCAACAACT 59.871 43.478 0.00 0.00 0.00 3.16
101 102 3.119495 ACAGAAACAGTCCAAGCAACAAC 60.119 43.478 0.00 0.00 0.00 3.32
102 103 3.088532 ACAGAAACAGTCCAAGCAACAA 58.911 40.909 0.00 0.00 0.00 2.83
103 104 2.423185 CACAGAAACAGTCCAAGCAACA 59.577 45.455 0.00 0.00 0.00 3.33
104 105 2.223572 CCACAGAAACAGTCCAAGCAAC 60.224 50.000 0.00 0.00 0.00 4.17
105 106 2.023673 CCACAGAAACAGTCCAAGCAA 58.976 47.619 0.00 0.00 0.00 3.91
106 107 1.064758 ACCACAGAAACAGTCCAAGCA 60.065 47.619 0.00 0.00 0.00 3.91
107 108 1.604278 GACCACAGAAACAGTCCAAGC 59.396 52.381 0.00 0.00 0.00 4.01
108 109 1.867233 CGACCACAGAAACAGTCCAAG 59.133 52.381 0.00 0.00 0.00 3.61
109 110 1.474320 CCGACCACAGAAACAGTCCAA 60.474 52.381 0.00 0.00 0.00 3.53
110 111 0.105964 CCGACCACAGAAACAGTCCA 59.894 55.000 0.00 0.00 0.00 4.02
111 112 1.228657 GCCGACCACAGAAACAGTCC 61.229 60.000 0.00 0.00 0.00 3.85
112 113 1.557443 CGCCGACCACAGAAACAGTC 61.557 60.000 0.00 0.00 0.00 3.51
113 114 1.594293 CGCCGACCACAGAAACAGT 60.594 57.895 0.00 0.00 0.00 3.55
114 115 1.284982 CTCGCCGACCACAGAAACAG 61.285 60.000 0.00 0.00 0.00 3.16
115 116 1.300620 CTCGCCGACCACAGAAACA 60.301 57.895 0.00 0.00 0.00 2.83
116 117 0.878961 AACTCGCCGACCACAGAAAC 60.879 55.000 0.00 0.00 0.00 2.78
117 118 0.179067 AAACTCGCCGACCACAGAAA 60.179 50.000 0.00 0.00 0.00 2.52
118 119 0.675083 TAAACTCGCCGACCACAGAA 59.325 50.000 0.00 0.00 0.00 3.02
119 120 0.242825 CTAAACTCGCCGACCACAGA 59.757 55.000 0.00 0.00 0.00 3.41
120 121 0.038526 ACTAAACTCGCCGACCACAG 60.039 55.000 0.00 0.00 0.00 3.66
121 122 0.390124 AACTAAACTCGCCGACCACA 59.610 50.000 0.00 0.00 0.00 4.17
122 123 1.193874 CAAACTAAACTCGCCGACCAC 59.806 52.381 0.00 0.00 0.00 4.16
123 124 1.202557 ACAAACTAAACTCGCCGACCA 60.203 47.619 0.00 0.00 0.00 4.02
124 125 1.193874 CACAAACTAAACTCGCCGACC 59.806 52.381 0.00 0.00 0.00 4.79
125 126 1.862827 ACACAAACTAAACTCGCCGAC 59.137 47.619 0.00 0.00 0.00 4.79
126 127 2.228138 ACACAAACTAAACTCGCCGA 57.772 45.000 0.00 0.00 0.00 5.54
127 128 3.328237 AAACACAAACTAAACTCGCCG 57.672 42.857 0.00 0.00 0.00 6.46
128 129 4.916870 AGAAAACACAAACTAAACTCGCC 58.083 39.130 0.00 0.00 0.00 5.54
129 130 7.130269 ACATAGAAAACACAAACTAAACTCGC 58.870 34.615 0.00 0.00 0.00 5.03
130 131 9.498307 AAACATAGAAAACACAAACTAAACTCG 57.502 29.630 0.00 0.00 0.00 4.18
132 133 9.581099 CCAAACATAGAAAACACAAACTAAACT 57.419 29.630 0.00 0.00 0.00 2.66
133 134 9.361315 ACCAAACATAGAAAACACAAACTAAAC 57.639 29.630 0.00 0.00 0.00 2.01
134 135 9.930693 AACCAAACATAGAAAACACAAACTAAA 57.069 25.926 0.00 0.00 0.00 1.85
135 136 9.930693 AAACCAAACATAGAAAACACAAACTAA 57.069 25.926 0.00 0.00 0.00 2.24
136 137 9.360093 CAAACCAAACATAGAAAACACAAACTA 57.640 29.630 0.00 0.00 0.00 2.24
137 138 7.333174 CCAAACCAAACATAGAAAACACAAACT 59.667 33.333 0.00 0.00 0.00 2.66
138 139 7.413548 CCCAAACCAAACATAGAAAACACAAAC 60.414 37.037 0.00 0.00 0.00 2.93
139 140 6.595716 CCCAAACCAAACATAGAAAACACAAA 59.404 34.615 0.00 0.00 0.00 2.83
140 141 6.109359 CCCAAACCAAACATAGAAAACACAA 58.891 36.000 0.00 0.00 0.00 3.33
141 142 5.187967 ACCCAAACCAAACATAGAAAACACA 59.812 36.000 0.00 0.00 0.00 3.72
142 143 5.666462 ACCCAAACCAAACATAGAAAACAC 58.334 37.500 0.00 0.00 0.00 3.32
143 144 5.450688 CGACCCAAACCAAACATAGAAAACA 60.451 40.000 0.00 0.00 0.00 2.83
144 145 4.979815 CGACCCAAACCAAACATAGAAAAC 59.020 41.667 0.00 0.00 0.00 2.43
145 146 4.888239 TCGACCCAAACCAAACATAGAAAA 59.112 37.500 0.00 0.00 0.00 2.29
146 147 4.462133 TCGACCCAAACCAAACATAGAAA 58.538 39.130 0.00 0.00 0.00 2.52
147 148 4.069304 CTCGACCCAAACCAAACATAGAA 58.931 43.478 0.00 0.00 0.00 2.10
148 149 3.670625 CTCGACCCAAACCAAACATAGA 58.329 45.455 0.00 0.00 0.00 1.98
149 150 2.161609 GCTCGACCCAAACCAAACATAG 59.838 50.000 0.00 0.00 0.00 2.23
150 151 2.156098 GCTCGACCCAAACCAAACATA 58.844 47.619 0.00 0.00 0.00 2.29
151 152 0.958822 GCTCGACCCAAACCAAACAT 59.041 50.000 0.00 0.00 0.00 2.71
152 153 0.394488 TGCTCGACCCAAACCAAACA 60.394 50.000 0.00 0.00 0.00 2.83
153 154 0.958822 ATGCTCGACCCAAACCAAAC 59.041 50.000 0.00 0.00 0.00 2.93
154 155 1.202879 AGATGCTCGACCCAAACCAAA 60.203 47.619 0.00 0.00 0.00 3.28
155 156 0.400213 AGATGCTCGACCCAAACCAA 59.600 50.000 0.00 0.00 0.00 3.67
156 157 0.036388 GAGATGCTCGACCCAAACCA 60.036 55.000 0.00 0.00 0.00 3.67
157 158 0.036388 TGAGATGCTCGACCCAAACC 60.036 55.000 0.00 0.00 32.35 3.27
158 159 1.667724 CATGAGATGCTCGACCCAAAC 59.332 52.381 0.00 0.00 32.35 2.93
159 160 1.278985 ACATGAGATGCTCGACCCAAA 59.721 47.619 0.00 0.00 32.35 3.28
160 161 0.904649 ACATGAGATGCTCGACCCAA 59.095 50.000 0.00 0.00 32.35 4.12
161 162 0.461548 GACATGAGATGCTCGACCCA 59.538 55.000 0.00 0.00 32.35 4.51
162 163 0.749649 AGACATGAGATGCTCGACCC 59.250 55.000 0.00 0.00 32.35 4.46
163 164 1.850377 CAGACATGAGATGCTCGACC 58.150 55.000 0.00 0.00 32.35 4.79
164 165 1.207390 GCAGACATGAGATGCTCGAC 58.793 55.000 0.00 0.00 37.00 4.20
165 166 0.103755 GGCAGACATGAGATGCTCGA 59.896 55.000 16.82 0.00 39.88 4.04
166 167 0.104487 AGGCAGACATGAGATGCTCG 59.896 55.000 16.82 0.00 39.88 5.03
167 168 2.364970 AGTAGGCAGACATGAGATGCTC 59.635 50.000 16.82 9.94 39.88 4.26
168 169 2.396608 AGTAGGCAGACATGAGATGCT 58.603 47.619 16.82 8.88 39.88 3.79
169 170 2.906691 AGTAGGCAGACATGAGATGC 57.093 50.000 0.00 6.35 39.25 3.91
170 171 3.181482 ACGAAGTAGGCAGACATGAGATG 60.181 47.826 0.00 0.00 41.94 2.90
171 172 3.027412 ACGAAGTAGGCAGACATGAGAT 58.973 45.455 0.00 0.00 41.94 2.75
172 173 2.164422 CACGAAGTAGGCAGACATGAGA 59.836 50.000 0.00 0.00 41.61 3.27
173 174 2.534298 CACGAAGTAGGCAGACATGAG 58.466 52.381 0.00 0.00 41.61 2.90
174 175 1.404181 GCACGAAGTAGGCAGACATGA 60.404 52.381 0.00 0.00 41.61 3.07
175 176 1.002366 GCACGAAGTAGGCAGACATG 58.998 55.000 0.00 0.00 41.61 3.21
176 177 0.608130 TGCACGAAGTAGGCAGACAT 59.392 50.000 0.00 0.00 41.61 3.06
177 178 0.319555 GTGCACGAAGTAGGCAGACA 60.320 55.000 0.00 0.00 41.61 3.41
178 179 1.014564 GGTGCACGAAGTAGGCAGAC 61.015 60.000 11.45 0.00 41.61 3.51
179 180 1.292223 GGTGCACGAAGTAGGCAGA 59.708 57.895 11.45 0.00 41.61 4.26
180 181 1.005037 TGGTGCACGAAGTAGGCAG 60.005 57.895 11.45 0.00 41.61 4.85
181 182 1.301401 GTGGTGCACGAAGTAGGCA 60.301 57.895 11.45 0.00 41.61 4.75
182 183 3.562635 GTGGTGCACGAAGTAGGC 58.437 61.111 11.45 0.00 41.61 3.93
191 192 4.307908 GGCGTGAACGTGGTGCAC 62.308 66.667 8.80 8.80 38.64 4.57
192 193 4.539083 AGGCGTGAACGTGGTGCA 62.539 61.111 4.59 0.00 42.22 4.57
193 194 3.712881 GAGGCGTGAACGTGGTGC 61.713 66.667 4.59 0.00 42.22 5.01
194 195 0.319211 TAAGAGGCGTGAACGTGGTG 60.319 55.000 4.59 0.00 42.22 4.17
195 196 0.390124 TTAAGAGGCGTGAACGTGGT 59.610 50.000 4.59 0.00 42.22 4.16
196 197 1.068474 CTTAAGAGGCGTGAACGTGG 58.932 55.000 4.59 0.00 42.22 4.94
197 198 1.455786 CACTTAAGAGGCGTGAACGTG 59.544 52.381 10.09 0.00 42.22 4.49
198 199 1.779569 CACTTAAGAGGCGTGAACGT 58.220 50.000 10.09 0.00 42.22 3.99
199 200 0.438830 GCACTTAAGAGGCGTGAACG 59.561 55.000 10.09 0.00 43.27 3.95
200 201 0.438830 CGCACTTAAGAGGCGTGAAC 59.561 55.000 26.55 1.25 45.27 3.18
201 202 2.822306 CGCACTTAAGAGGCGTGAA 58.178 52.632 26.55 0.00 45.27 3.18
202 203 4.571250 CGCACTTAAGAGGCGTGA 57.429 55.556 26.55 0.00 45.27 4.35
206 207 4.809426 ACACATATAACGCACTTAAGAGGC 59.191 41.667 10.09 11.28 0.00 4.70
207 208 6.312918 ACAACACATATAACGCACTTAAGAGG 59.687 38.462 10.09 1.93 0.00 3.69
208 209 7.290857 ACAACACATATAACGCACTTAAGAG 57.709 36.000 10.09 1.84 0.00 2.85
209 210 8.936070 ATACAACACATATAACGCACTTAAGA 57.064 30.769 10.09 0.00 0.00 2.10
210 211 8.813282 TGATACAACACATATAACGCACTTAAG 58.187 33.333 0.00 0.00 0.00 1.85
211 212 8.705048 TGATACAACACATATAACGCACTTAA 57.295 30.769 0.00 0.00 0.00 1.85
212 213 8.880878 ATGATACAACACATATAACGCACTTA 57.119 30.769 0.00 0.00 0.00 2.24
213 214 7.710907 AGATGATACAACACATATAACGCACTT 59.289 33.333 0.00 0.00 0.00 3.16
214 215 7.210174 AGATGATACAACACATATAACGCACT 58.790 34.615 0.00 0.00 0.00 4.40
215 216 7.408132 AGATGATACAACACATATAACGCAC 57.592 36.000 0.00 0.00 0.00 5.34
216 217 8.357402 AGTAGATGATACAACACATATAACGCA 58.643 33.333 0.00 0.00 0.00 5.24
217 218 8.639428 CAGTAGATGATACAACACATATAACGC 58.361 37.037 0.00 0.00 0.00 4.84
218 219 9.678941 ACAGTAGATGATACAACACATATAACG 57.321 33.333 0.00 0.00 0.00 3.18
223 224 9.403583 TGAGTACAGTAGATGATACAACACATA 57.596 33.333 0.00 0.00 0.00 2.29
224 225 8.293699 TGAGTACAGTAGATGATACAACACAT 57.706 34.615 0.00 0.00 0.00 3.21
225 226 7.696992 TGAGTACAGTAGATGATACAACACA 57.303 36.000 0.00 0.00 0.00 3.72
226 227 9.239002 GATTGAGTACAGTAGATGATACAACAC 57.761 37.037 0.00 0.00 0.00 3.32
227 228 9.190317 AGATTGAGTACAGTAGATGATACAACA 57.810 33.333 0.00 0.00 0.00 3.33
228 229 9.457110 CAGATTGAGTACAGTAGATGATACAAC 57.543 37.037 0.00 0.00 0.00 3.32
229 230 9.408648 TCAGATTGAGTACAGTAGATGATACAA 57.591 33.333 0.00 0.00 0.00 2.41
230 231 8.841300 GTCAGATTGAGTACAGTAGATGATACA 58.159 37.037 0.00 0.00 0.00 2.29
231 232 9.062524 AGTCAGATTGAGTACAGTAGATGATAC 57.937 37.037 0.00 0.00 0.00 2.24
232 233 9.634021 AAGTCAGATTGAGTACAGTAGATGATA 57.366 33.333 0.00 0.00 28.24 2.15
233 234 8.532186 AAGTCAGATTGAGTACAGTAGATGAT 57.468 34.615 0.00 0.00 28.24 2.45
234 235 7.831690 AGAAGTCAGATTGAGTACAGTAGATGA 59.168 37.037 0.00 0.00 28.24 2.92
235 236 7.995289 AGAAGTCAGATTGAGTACAGTAGATG 58.005 38.462 0.00 0.00 28.24 2.90
236 237 8.588290 AAGAAGTCAGATTGAGTACAGTAGAT 57.412 34.615 0.00 0.00 28.24 1.98
237 238 7.885922 AGAAGAAGTCAGATTGAGTACAGTAGA 59.114 37.037 0.00 0.00 28.24 2.59
238 239 8.050778 AGAAGAAGTCAGATTGAGTACAGTAG 57.949 38.462 0.00 0.00 28.24 2.57
239 240 9.688091 ATAGAAGAAGTCAGATTGAGTACAGTA 57.312 33.333 0.00 0.00 28.24 2.74
240 241 6.909550 AGAAGAAGTCAGATTGAGTACAGT 57.090 37.500 0.00 0.00 28.24 3.55
267 268 8.958119 AAGCTTGCATATCATTTCATTTCATT 57.042 26.923 0.00 0.00 0.00 2.57
268 269 8.958119 AAAGCTTGCATATCATTTCATTTCAT 57.042 26.923 0.00 0.00 0.00 2.57
269 270 7.493320 GGAAAGCTTGCATATCATTTCATTTCA 59.507 33.333 6.80 0.00 0.00 2.69
270 271 7.042254 GGGAAAGCTTGCATATCATTTCATTTC 60.042 37.037 6.80 0.00 0.00 2.17
271 272 6.764560 GGGAAAGCTTGCATATCATTTCATTT 59.235 34.615 6.80 0.00 0.00 2.32
272 273 6.099269 AGGGAAAGCTTGCATATCATTTCATT 59.901 34.615 6.80 0.00 0.00 2.57
273 274 5.601313 AGGGAAAGCTTGCATATCATTTCAT 59.399 36.000 6.80 0.00 0.00 2.57
274 275 4.957954 AGGGAAAGCTTGCATATCATTTCA 59.042 37.500 6.80 0.00 0.00 2.69
275 276 5.526506 AGGGAAAGCTTGCATATCATTTC 57.473 39.130 6.80 0.00 0.00 2.17
276 277 7.607615 AATAGGGAAAGCTTGCATATCATTT 57.392 32.000 6.80 0.00 27.78 2.32
277 278 7.439381 CAAATAGGGAAAGCTTGCATATCATT 58.561 34.615 6.80 0.00 27.78 2.57
278 279 6.517864 GCAAATAGGGAAAGCTTGCATATCAT 60.518 38.462 6.80 0.00 41.55 2.45
279 280 5.221303 GCAAATAGGGAAAGCTTGCATATCA 60.221 40.000 6.80 0.00 41.55 2.15
280 281 5.225642 GCAAATAGGGAAAGCTTGCATATC 58.774 41.667 6.80 0.00 41.55 1.63
281 282 4.261741 CGCAAATAGGGAAAGCTTGCATAT 60.262 41.667 6.80 1.16 41.92 1.78
282 283 3.066621 CGCAAATAGGGAAAGCTTGCATA 59.933 43.478 6.80 0.00 41.92 3.14
283 284 2.159198 CGCAAATAGGGAAAGCTTGCAT 60.159 45.455 6.80 0.00 41.92 3.96
284 285 1.202114 CGCAAATAGGGAAAGCTTGCA 59.798 47.619 6.80 0.00 41.92 4.08
285 286 1.472480 TCGCAAATAGGGAAAGCTTGC 59.528 47.619 0.00 0.00 39.16 4.01
286 287 3.848272 TTCGCAAATAGGGAAAGCTTG 57.152 42.857 0.00 0.00 45.00 4.01
293 294 9.255304 GCAATTATTATTTTTCGCAAATAGGGA 57.745 29.630 0.00 0.00 37.42 4.20
294 295 9.260002 AGCAATTATTATTTTTCGCAAATAGGG 57.740 29.630 0.00 0.00 0.00 3.53
336 337 9.944663 GGCAATGTCACGATTAATTTAAGAATA 57.055 29.630 0.00 0.00 0.00 1.75
337 338 8.686334 AGGCAATGTCACGATTAATTTAAGAAT 58.314 29.630 0.00 0.00 0.00 2.40
338 339 7.967854 CAGGCAATGTCACGATTAATTTAAGAA 59.032 33.333 0.00 0.00 0.00 2.52
339 340 7.335673 TCAGGCAATGTCACGATTAATTTAAGA 59.664 33.333 0.00 0.00 0.00 2.10
340 341 7.471721 TCAGGCAATGTCACGATTAATTTAAG 58.528 34.615 0.00 0.00 0.00 1.85
341 342 7.384439 TCAGGCAATGTCACGATTAATTTAA 57.616 32.000 0.00 0.00 0.00 1.52
342 343 6.993786 TCAGGCAATGTCACGATTAATTTA 57.006 33.333 0.00 0.00 0.00 1.40
343 344 5.895636 TCAGGCAATGTCACGATTAATTT 57.104 34.783 0.00 0.00 0.00 1.82
344 345 6.455360 AATCAGGCAATGTCACGATTAATT 57.545 33.333 1.46 0.00 0.00 1.40
345 346 7.750229 ATAATCAGGCAATGTCACGATTAAT 57.250 32.000 11.78 0.00 31.28 1.40
346 347 7.281999 TGAATAATCAGGCAATGTCACGATTAA 59.718 33.333 11.78 0.00 31.28 1.40
347 348 6.765512 TGAATAATCAGGCAATGTCACGATTA 59.234 34.615 10.64 10.64 31.86 1.75
348 349 5.589855 TGAATAATCAGGCAATGTCACGATT 59.410 36.000 7.49 7.49 0.00 3.34
349 350 5.125356 TGAATAATCAGGCAATGTCACGAT 58.875 37.500 0.00 0.00 0.00 3.73
350 351 4.512484 TGAATAATCAGGCAATGTCACGA 58.488 39.130 0.00 0.00 0.00 4.35
351 352 4.880886 TGAATAATCAGGCAATGTCACG 57.119 40.909 0.00 0.00 0.00 4.35
352 353 5.030295 CGTTGAATAATCAGGCAATGTCAC 58.970 41.667 0.00 0.00 36.78 3.67
353 354 4.438608 GCGTTGAATAATCAGGCAATGTCA 60.439 41.667 0.00 0.00 37.02 3.58
354 355 4.037690 GCGTTGAATAATCAGGCAATGTC 58.962 43.478 0.00 0.00 37.02 3.06
355 356 3.696051 AGCGTTGAATAATCAGGCAATGT 59.304 39.130 8.16 0.00 38.54 2.71
356 357 4.297299 AGCGTTGAATAATCAGGCAATG 57.703 40.909 8.16 0.00 38.54 2.82
357 358 4.023707 GCTAGCGTTGAATAATCAGGCAAT 60.024 41.667 0.00 0.00 38.54 3.56
358 359 3.312421 GCTAGCGTTGAATAATCAGGCAA 59.688 43.478 0.00 0.00 38.54 4.52
359 360 2.872245 GCTAGCGTTGAATAATCAGGCA 59.128 45.455 0.00 0.00 38.54 4.75
360 361 3.059325 CAGCTAGCGTTGAATAATCAGGC 60.059 47.826 9.55 0.00 36.78 4.85
361 362 3.059325 GCAGCTAGCGTTGAATAATCAGG 60.059 47.826 9.55 0.00 36.78 3.86
362 363 4.125912 GCAGCTAGCGTTGAATAATCAG 57.874 45.455 9.55 0.00 36.78 2.90
375 376 1.516386 TCGCAAGTACGCAGCTAGC 60.516 57.895 6.62 6.62 38.27 3.42
376 377 0.179161 AGTCGCAAGTACGCAGCTAG 60.179 55.000 0.00 0.00 39.48 3.42
377 378 0.456142 CAGTCGCAAGTACGCAGCTA 60.456 55.000 0.00 0.00 39.48 3.32
378 379 1.734477 CAGTCGCAAGTACGCAGCT 60.734 57.895 5.85 0.00 39.48 4.24
379 380 2.772189 CAGTCGCAAGTACGCAGC 59.228 61.111 0.00 0.00 39.48 5.25
380 381 2.772189 GCAGTCGCAAGTACGCAG 59.228 61.111 0.00 0.00 38.36 5.18
381 382 3.103289 CGCAGTCGCAAGTACGCA 61.103 61.111 0.00 0.00 38.40 5.24
382 383 3.103911 ACGCAGTCGCAAGTACGC 61.104 61.111 0.00 0.00 29.74 4.42
383 384 2.763248 CACGCAGTCGCAAGTACG 59.237 61.111 0.00 0.00 41.61 3.67
384 385 2.470286 GCACGCAGTCGCAAGTAC 59.530 61.111 0.00 0.00 41.61 2.73
385 386 2.736995 GGCACGCAGTCGCAAGTA 60.737 61.111 0.00 0.00 41.61 2.24
403 404 4.767255 GTCGCTCACCCAGGCCAG 62.767 72.222 5.01 0.00 0.00 4.85
411 412 4.803426 CTCTGCCGGTCGCTCACC 62.803 72.222 1.90 0.00 42.69 4.02
412 413 4.803426 CCTCTGCCGGTCGCTCAC 62.803 72.222 1.90 0.00 38.78 3.51
414 415 4.200283 CTCCTCTGCCGGTCGCTC 62.200 72.222 1.90 0.00 38.78 5.03
423 424 2.493973 CTCGTCTGGCTCCTCTGC 59.506 66.667 0.00 0.00 0.00 4.26
424 425 3.205395 CCTCGTCTGGCTCCTCTG 58.795 66.667 0.00 0.00 0.00 3.35
459 460 4.773117 GTCGTCGTCTCCACGGGC 62.773 72.222 0.00 0.00 46.70 6.13
460 461 4.456253 CGTCGTCGTCTCCACGGG 62.456 72.222 0.00 0.00 46.70 5.28
463 464 4.773117 GGGCGTCGTCGTCTCCAC 62.773 72.222 6.62 0.00 41.76 4.02
466 467 4.808238 GTCGGGCGTCGTCGTCTC 62.808 72.222 6.62 0.00 41.76 3.36
485 486 4.415332 TCGAACAGCGGACGGAGC 62.415 66.667 0.00 0.00 41.33 4.70
486 487 2.504244 GTCGAACAGCGGACGGAG 60.504 66.667 0.00 0.00 41.33 4.63
487 488 4.047059 GGTCGAACAGCGGACGGA 62.047 66.667 0.00 0.00 41.33 4.69
488 489 3.966026 GAGGTCGAACAGCGGACGG 62.966 68.421 1.87 0.00 41.33 4.79
489 490 2.504244 GAGGTCGAACAGCGGACG 60.504 66.667 1.87 0.00 41.33 4.79
490 491 2.504244 CGAGGTCGAACAGCGGAC 60.504 66.667 1.87 0.00 43.02 4.79
491 492 2.670592 TCGAGGTCGAACAGCGGA 60.671 61.111 14.38 0.00 46.30 5.54
500 501 4.323843 CGGCCCGTATCGAGGTCG 62.324 72.222 0.78 0.78 45.98 4.79
501 502 4.642542 GCGGCCCGTATCGAGGTC 62.643 72.222 4.45 0.00 0.00 3.85
503 504 3.515316 ATTGCGGCCCGTATCGAGG 62.515 63.158 4.45 0.00 0.00 4.63
504 505 2.022129 GATTGCGGCCCGTATCGAG 61.022 63.158 4.45 0.00 0.00 4.04
505 506 2.028484 GATTGCGGCCCGTATCGA 59.972 61.111 4.45 0.00 0.00 3.59
506 507 3.041940 GGATTGCGGCCCGTATCG 61.042 66.667 4.45 0.00 0.00 2.92
507 508 2.668550 GGGATTGCGGCCCGTATC 60.669 66.667 4.45 8.39 35.50 2.24
518 519 3.750373 ATTCGGGCGGTCGGGATTG 62.750 63.158 0.00 0.00 0.00 2.67
519 520 3.456105 GATTCGGGCGGTCGGGATT 62.456 63.158 0.00 0.00 0.00 3.01
520 521 3.925090 GATTCGGGCGGTCGGGAT 61.925 66.667 0.00 0.00 0.00 3.85
565 566 0.247934 GTATTTCCTTTTCCGGCGCG 60.248 55.000 0.00 0.00 0.00 6.86
566 567 1.063616 GAGTATTTCCTTTTCCGGCGC 59.936 52.381 0.00 0.00 0.00 6.53
567 568 2.608090 GAGAGTATTTCCTTTTCCGGCG 59.392 50.000 0.00 0.00 0.00 6.46
568 569 3.875125 AGAGAGTATTTCCTTTTCCGGC 58.125 45.455 0.00 0.00 0.00 6.13
569 570 7.769044 TCATTTAGAGAGTATTTCCTTTTCCGG 59.231 37.037 0.00 0.00 0.00 5.14
570 571 8.604890 GTCATTTAGAGAGTATTTCCTTTTCCG 58.395 37.037 0.00 0.00 0.00 4.30
571 572 9.449719 TGTCATTTAGAGAGTATTTCCTTTTCC 57.550 33.333 0.00 0.00 0.00 3.13
573 574 9.454859 CCTGTCATTTAGAGAGTATTTCCTTTT 57.545 33.333 0.00 0.00 35.93 2.27
574 575 8.606830 ACCTGTCATTTAGAGAGTATTTCCTTT 58.393 33.333 0.00 0.00 35.93 3.11
575 576 8.043710 CACCTGTCATTTAGAGAGTATTTCCTT 58.956 37.037 0.00 0.00 35.93 3.36
576 577 7.365117 CCACCTGTCATTTAGAGAGTATTTCCT 60.365 40.741 0.00 0.00 35.93 3.36
577 578 6.763610 CCACCTGTCATTTAGAGAGTATTTCC 59.236 42.308 0.00 0.00 35.93 3.13
578 579 6.763610 CCCACCTGTCATTTAGAGAGTATTTC 59.236 42.308 0.00 0.00 35.93 2.17
579 580 6.215636 ACCCACCTGTCATTTAGAGAGTATTT 59.784 38.462 0.00 0.00 35.93 1.40
580 581 5.726793 ACCCACCTGTCATTTAGAGAGTATT 59.273 40.000 0.00 0.00 35.93 1.89
581 582 5.281314 ACCCACCTGTCATTTAGAGAGTAT 58.719 41.667 0.00 0.00 35.93 2.12
582 583 4.684724 ACCCACCTGTCATTTAGAGAGTA 58.315 43.478 0.00 0.00 35.93 2.59
583 584 3.515901 GACCCACCTGTCATTTAGAGAGT 59.484 47.826 0.00 0.00 35.93 3.24
584 585 3.118592 GGACCCACCTGTCATTTAGAGAG 60.119 52.174 0.00 0.00 36.97 3.20
585 586 2.838202 GGACCCACCTGTCATTTAGAGA 59.162 50.000 0.00 0.00 36.97 3.10
586 587 2.571653 TGGACCCACCTGTCATTTAGAG 59.428 50.000 0.00 0.00 39.86 2.43
587 588 2.626785 TGGACCCACCTGTCATTTAGA 58.373 47.619 0.00 0.00 39.86 2.10
588 589 3.081804 GTTGGACCCACCTGTCATTTAG 58.918 50.000 0.00 0.00 39.86 1.85
589 590 2.551287 CGTTGGACCCACCTGTCATTTA 60.551 50.000 0.00 0.00 39.86 1.40
590 591 1.817740 CGTTGGACCCACCTGTCATTT 60.818 52.381 0.00 0.00 39.86 2.32
591 592 0.250727 CGTTGGACCCACCTGTCATT 60.251 55.000 0.00 0.00 39.86 2.57
592 593 1.374947 CGTTGGACCCACCTGTCAT 59.625 57.895 0.00 0.00 39.86 3.06
593 594 2.825982 CGTTGGACCCACCTGTCA 59.174 61.111 0.00 0.00 39.86 3.58
690 2266 1.124462 CGAAATCAGACTCGGATCGC 58.876 55.000 0.00 0.00 0.00 4.58
1021 2599 1.589716 GCCTTGCGGAGTTTGCTCAT 61.590 55.000 0.00 0.00 43.37 2.90
1339 2921 7.330700 CAGTTTGACCAACACTGTACAAAAATT 59.669 33.333 0.00 0.00 37.93 1.82
1365 2947 8.520835 AGTTCAAAAAGAGTCAAACTTGTTTC 57.479 30.769 0.00 0.00 0.00 2.78
1552 3181 1.722034 ACTTGCCTCCAGAGAAGTCA 58.278 50.000 0.00 0.00 0.00 3.41
1670 3302 4.755123 GCTTAAGTAGACCAGCAGAAAACA 59.245 41.667 4.02 0.00 32.17 2.83
1696 3328 9.884465 AATTAGATATGTTAGCTTCGCAAAATC 57.116 29.630 0.00 0.00 0.00 2.17
1806 3438 8.299570 ACAACTGGACATTCATTAAAGATGAAC 58.700 33.333 3.79 0.00 40.37 3.18
1991 3623 4.023536 TCCGAGTTTCATTAGTTTGGTTGC 60.024 41.667 0.00 0.00 0.00 4.17
2011 3643 1.135575 GGAGAAAAGTGCAGCATTCCG 60.136 52.381 0.00 0.00 0.00 4.30
2030 3662 2.101415 TGTGAATGTCAGCTATCCGAGG 59.899 50.000 0.00 0.00 0.00 4.63
2103 3735 1.746615 CTGGTGGGGCTGAATCACG 60.747 63.158 0.00 0.00 32.65 4.35
2104 3736 0.962356 CACTGGTGGGGCTGAATCAC 60.962 60.000 0.00 0.00 0.00 3.06
2105 3737 1.133181 TCACTGGTGGGGCTGAATCA 61.133 55.000 0.70 0.00 0.00 2.57
2106 3738 0.257039 ATCACTGGTGGGGCTGAATC 59.743 55.000 0.70 0.00 0.00 2.52
2107 3739 0.706433 AATCACTGGTGGGGCTGAAT 59.294 50.000 0.70 0.00 0.00 2.57
2108 3740 0.038166 GAATCACTGGTGGGGCTGAA 59.962 55.000 0.70 0.00 0.00 3.02
2109 3741 1.133181 TGAATCACTGGTGGGGCTGA 61.133 55.000 0.70 0.00 0.00 4.26
2110 3742 0.679002 CTGAATCACTGGTGGGGCTG 60.679 60.000 0.70 0.00 0.00 4.85
2111 3743 1.687612 CTGAATCACTGGTGGGGCT 59.312 57.895 0.70 0.00 0.00 5.19
2112 3744 2.048603 GCTGAATCACTGGTGGGGC 61.049 63.158 0.70 0.00 0.00 5.80
2113 3745 1.379044 GGCTGAATCACTGGTGGGG 60.379 63.158 0.70 0.00 0.00 4.96
2114 3746 1.379044 GGGCTGAATCACTGGTGGG 60.379 63.158 0.70 0.00 0.00 4.61
2115 3747 1.379044 GGGGCTGAATCACTGGTGG 60.379 63.158 0.70 0.00 0.00 4.61
2116 3748 0.962356 GTGGGGCTGAATCACTGGTG 60.962 60.000 0.00 0.00 0.00 4.17
2117 3749 1.380302 GTGGGGCTGAATCACTGGT 59.620 57.895 0.00 0.00 0.00 4.00
2118 3750 1.379044 GGTGGGGCTGAATCACTGG 60.379 63.158 0.00 0.00 0.00 4.00
2119 3751 0.251297 TTGGTGGGGCTGAATCACTG 60.251 55.000 0.00 0.00 0.00 3.66
2120 3752 0.706433 ATTGGTGGGGCTGAATCACT 59.294 50.000 0.00 0.00 0.00 3.41
2465 4097 7.858052 ATAGAAGTGCAAAATGAAAAACGAG 57.142 32.000 0.00 0.00 0.00 4.18
2559 4191 2.781923 TGCTTATGCTTGCAGTTCTCA 58.218 42.857 0.87 0.00 40.48 3.27
2883 4516 7.011482 GCGAGGGGATATGTATATGTTTGATTC 59.989 40.741 0.00 0.00 0.00 2.52
2912 4548 4.882671 ATATTTGACACAGATGGTTCGC 57.117 40.909 0.00 0.00 0.00 4.70
2914 4550 7.041098 GGGTGATATATTTGACACAGATGGTTC 60.041 40.741 0.00 0.00 35.33 3.62
2932 4568 4.134563 GCTTTGAATACACCGGGTGATAT 58.865 43.478 32.72 21.31 36.96 1.63
2996 4632 0.461548 ACATCATCATCGACTGCGGT 59.538 50.000 0.00 0.00 38.28 5.68
3002 4638 4.908156 GCAAATAAGCACATCATCATCGAC 59.092 41.667 0.00 0.00 0.00 4.20
3026 4662 3.262420 CAACACCTTTCCCGACAGATAG 58.738 50.000 0.00 0.00 0.00 2.08
3029 4665 0.834612 ACAACACCTTTCCCGACAGA 59.165 50.000 0.00 0.00 0.00 3.41
3035 4671 2.032924 CGAACTCAACAACACCTTTCCC 59.967 50.000 0.00 0.00 0.00 3.97
3118 4754 9.448438 TTTAATTTCACTGCTAAGCTCTGATAA 57.552 29.630 0.00 0.00 0.00 1.75
3120 4756 7.928307 TTTAATTTCACTGCTAAGCTCTGAT 57.072 32.000 0.00 0.00 0.00 2.90
3221 4857 7.661437 AGTTTGACTTGAGACAATGCTAATACA 59.339 33.333 0.00 0.00 30.67 2.29
3290 4926 9.480861 TTCCAATGGTATTGATTTGGTATTGTA 57.519 29.630 0.00 0.00 39.67 2.41
3883 5595 4.828072 AAGTAGGAGAATCAACAGACCC 57.172 45.455 0.00 0.00 36.25 4.46
3912 5624 8.421249 AATGGAAAACAGGAGAAATTATGTGA 57.579 30.769 0.00 0.00 0.00 3.58
3953 5665 6.207417 ACATTTACAGAAATTCACAGAGGGTG 59.793 38.462 0.00 0.00 39.87 4.61
4091 5803 0.535780 TCGTCGGGTATATCGTGCCT 60.536 55.000 0.00 0.00 32.37 4.75
4176 5888 2.663196 GCTTCACCCTACTGCGGT 59.337 61.111 2.42 2.42 0.00 5.68
4307 6020 2.660064 GGAGCCTGTGACCGATGGT 61.660 63.158 0.00 0.00 39.44 3.55
4316 6029 4.696479 AATGTATAAGAGGGAGCCTGTG 57.304 45.455 0.00 0.00 31.76 3.66
4361 6074 1.683385 GGGGCTGCATAACATTTCCTC 59.317 52.381 0.50 0.00 0.00 3.71
4375 6088 4.035208 CGTATTAAGCTTAACAAGGGGCTG 59.965 45.833 20.85 1.10 35.08 4.85
4381 6094 7.263496 AGGGAGTACGTATTAAGCTTAACAAG 58.737 38.462 20.85 14.38 0.00 3.16
4390 6103 4.578105 AGAACGGAGGGAGTACGTATTAAG 59.422 45.833 0.00 0.00 40.31 1.85
4398 6111 5.334724 TCAAAATAGAACGGAGGGAGTAC 57.665 43.478 0.00 0.00 0.00 2.73
4399 6112 6.168389 GTTTCAAAATAGAACGGAGGGAGTA 58.832 40.000 0.00 0.00 0.00 2.59
4400 6113 4.903045 TTCAAAATAGAACGGAGGGAGT 57.097 40.909 0.00 0.00 0.00 3.85
4401 6114 4.092968 CGTTTCAAAATAGAACGGAGGGAG 59.907 45.833 0.00 0.00 0.00 4.30
4402 6115 3.998341 CGTTTCAAAATAGAACGGAGGGA 59.002 43.478 0.00 0.00 0.00 4.20
4403 6116 3.126343 CCGTTTCAAAATAGAACGGAGGG 59.874 47.826 18.90 0.00 40.92 4.30
4404 6117 3.998341 TCCGTTTCAAAATAGAACGGAGG 59.002 43.478 21.39 1.89 41.57 4.30
4406 6119 3.998341 CCTCCGTTTCAAAATAGAACGGA 59.002 43.478 23.05 23.05 42.81 4.69
4407 6120 3.126343 CCCTCCGTTTCAAAATAGAACGG 59.874 47.826 17.91 17.91 40.37 4.44
4408 6121 3.998341 TCCCTCCGTTTCAAAATAGAACG 59.002 43.478 0.00 0.00 0.00 3.95
4409 6122 5.001874 ACTCCCTCCGTTTCAAAATAGAAC 58.998 41.667 0.00 0.00 0.00 3.01
4410 6123 5.237236 ACTCCCTCCGTTTCAAAATAGAA 57.763 39.130 0.00 0.00 0.00 2.10
4411 6124 4.903045 ACTCCCTCCGTTTCAAAATAGA 57.097 40.909 0.00 0.00 0.00 1.98
4412 6125 6.113411 ACATACTCCCTCCGTTTCAAAATAG 58.887 40.000 0.00 0.00 0.00 1.73
4413 6126 6.057321 ACATACTCCCTCCGTTTCAAAATA 57.943 37.500 0.00 0.00 0.00 1.40
4414 6127 4.918588 ACATACTCCCTCCGTTTCAAAAT 58.081 39.130 0.00 0.00 0.00 1.82
4415 6128 4.202377 TGACATACTCCCTCCGTTTCAAAA 60.202 41.667 0.00 0.00 0.00 2.44
4416 6129 3.325425 TGACATACTCCCTCCGTTTCAAA 59.675 43.478 0.00 0.00 0.00 2.69
4417 6130 2.901192 TGACATACTCCCTCCGTTTCAA 59.099 45.455 0.00 0.00 0.00 2.69
4418 6131 2.531771 TGACATACTCCCTCCGTTTCA 58.468 47.619 0.00 0.00 0.00 2.69
4419 6132 3.821421 ATGACATACTCCCTCCGTTTC 57.179 47.619 0.00 0.00 0.00 2.78
4420 6133 4.514401 GAAATGACATACTCCCTCCGTTT 58.486 43.478 0.00 0.00 0.00 3.60
4421 6134 3.118371 GGAAATGACATACTCCCTCCGTT 60.118 47.826 5.51 0.00 0.00 4.44
4422 6135 2.434702 GGAAATGACATACTCCCTCCGT 59.565 50.000 5.51 0.00 0.00 4.69
4423 6136 2.434336 TGGAAATGACATACTCCCTCCG 59.566 50.000 12.00 0.00 0.00 4.63
4424 6137 3.456277 AGTGGAAATGACATACTCCCTCC 59.544 47.826 12.00 3.15 0.00 4.30
4425 6138 4.762289 AGTGGAAATGACATACTCCCTC 57.238 45.455 12.00 7.10 0.00 4.30
4426 6139 6.831664 AATAGTGGAAATGACATACTCCCT 57.168 37.500 12.00 10.90 0.00 4.20
4427 6140 7.264373 CAAATAGTGGAAATGACATACTCCC 57.736 40.000 12.00 5.82 0.00 4.30
4507 6220 4.957327 AGGATATATAGAGCGGGTTTCCTC 59.043 45.833 0.00 0.00 0.00 3.71
4569 6284 3.446442 AGAAGTTCCTGTCATGGCATT 57.554 42.857 0.00 0.00 0.00 3.56
4571 6286 4.574674 AATAGAAGTTCCTGTCATGGCA 57.425 40.909 0.00 0.00 0.00 4.92
4588 6305 9.628983 GTTTTCGCCGTAGAAATAGTTAAATAG 57.371 33.333 3.85 0.00 39.52 1.73
4593 6310 5.512788 CGAGTTTTCGCCGTAGAAATAGTTA 59.487 40.000 3.85 0.00 40.36 2.24
4671 6391 6.979817 TCTTCACTTTCATTCAACACAAATGG 59.020 34.615 0.00 0.00 35.32 3.16
4719 6442 4.041567 TGCAGAATGTCTTAAGTCCCAGAA 59.958 41.667 1.63 0.00 39.31 3.02
4720 6443 3.582647 TGCAGAATGTCTTAAGTCCCAGA 59.417 43.478 1.63 0.00 39.31 3.86
4721 6444 3.942829 TGCAGAATGTCTTAAGTCCCAG 58.057 45.455 1.63 0.00 39.31 4.45
4722 6445 4.574674 ATGCAGAATGTCTTAAGTCCCA 57.425 40.909 1.63 0.00 39.31 4.37
4725 6448 5.786401 ACGAATGCAGAATGTCTTAAGTC 57.214 39.130 1.63 0.00 39.31 3.01
4726 6449 5.292101 GCTACGAATGCAGAATGTCTTAAGT 59.708 40.000 1.63 0.00 39.31 2.24
4769 6493 8.681486 TGAGGACGTATTACAGTATAGCTTTA 57.319 34.615 0.00 0.00 0.00 1.85
4770 6494 7.578310 TGAGGACGTATTACAGTATAGCTTT 57.422 36.000 0.00 0.00 0.00 3.51
4803 6791 7.317722 ACTACTCCCTCTGTAAAACATCTTT 57.682 36.000 0.00 0.00 0.00 2.52
4843 6831 5.978814 ACTTGTTCCTATAGAAGTCGCATT 58.021 37.500 0.00 0.00 34.29 3.56
4913 6903 7.364522 TCACATTGTGATAGCTTACAAGTTC 57.635 36.000 15.41 0.00 39.83 3.01
5021 7012 3.815401 GGTATGGTATGAGTGCCAATGTC 59.185 47.826 0.00 0.00 43.65 3.06
5115 7107 1.082690 GCTTCTTGTAGGCTGTCTGC 58.917 55.000 0.00 0.00 41.94 4.26
5142 7134 6.432783 TCAGGTTTTCATGTTGGGTATACTTG 59.567 38.462 2.25 0.00 33.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.