Multiple sequence alignment - TraesCS5D01G143000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G143000 chr5D 100.000 3521 0 0 1 3521 228961043 228957523 0.000000e+00 6503.0
1 TraesCS5D01G143000 chr5D 83.376 1955 291 20 603 2528 243807177 243809126 0.000000e+00 1779.0
2 TraesCS5D01G143000 chr5D 96.687 332 11 0 3043 3374 243767210 243767541 1.430000e-153 553.0
3 TraesCS5D01G143000 chr5D 96.525 259 9 0 2797 3055 228927424 228927166 2.510000e-116 429.0
4 TraesCS5D01G143000 chr5D 93.805 113 6 1 3378 3490 243791657 243791768 6.040000e-38 169.0
5 TraesCS5D01G143000 chr5D 100.000 30 0 0 2787 2816 345101987 345102016 4.910000e-04 56.5
6 TraesCS5D01G143000 chr5A 94.238 2447 105 13 360 2785 327907695 327910126 0.000000e+00 3705.0
7 TraesCS5D01G143000 chr5A 83.223 1955 294 20 603 2528 327916684 327918633 0.000000e+00 1762.0
8 TraesCS5D01G143000 chr5A 87.174 998 65 18 1850 2785 327910326 327911322 0.000000e+00 1075.0
9 TraesCS5D01G143000 chr5A 85.806 155 18 3 88 240 464635765 464635917 1.010000e-35 161.0
10 TraesCS5D01G143000 chr5A 94.000 100 5 1 2836 2934 327910139 327910238 2.190000e-32 150.0
11 TraesCS5D01G143000 chr5A 100.000 34 0 0 2787 2820 606956425 606956392 2.930000e-06 63.9
12 TraesCS5D01G143000 chr5A 100.000 30 0 0 2787 2816 445766131 445766102 4.910000e-04 56.5
13 TraesCS5D01G143000 chr5A 100.000 30 0 0 2787 2816 445813079 445813108 4.910000e-04 56.5
14 TraesCS5D01G143000 chr5B 94.650 2243 89 8 573 2785 276899433 276901674 0.000000e+00 3448.0
15 TraesCS5D01G143000 chr5B 82.619 1634 254 16 920 2528 276906338 276907966 0.000000e+00 1417.0
16 TraesCS5D01G143000 chr5B 85.154 357 36 7 2950 3298 276901857 276902204 2.010000e-92 350.0
17 TraesCS5D01G143000 chr2D 79.592 245 44 5 1 243 56434421 56434661 1.680000e-38 171.0
18 TraesCS5D01G143000 chr2D 82.192 146 22 3 99 242 271541120 271540977 4.770000e-24 122.0
19 TraesCS5D01G143000 chr2D 79.882 169 28 5 27 194 106362901 106362738 6.170000e-23 119.0
20 TraesCS5D01G143000 chr1D 86.290 124 17 0 119 242 97313650 97313773 6.130000e-28 135.0
21 TraesCS5D01G143000 chr2A 80.240 167 28 4 29 194 102895945 102895783 1.720000e-23 121.0
22 TraesCS5D01G143000 chr2A 100.000 32 0 0 2789 2820 717115132 717115163 3.800000e-05 60.2
23 TraesCS5D01G143000 chr6A 90.769 65 5 1 178 242 47701447 47701510 6.260000e-13 86.1
24 TraesCS5D01G143000 chr4A 93.023 43 3 0 1281 1323 614043364 614043322 2.930000e-06 63.9
25 TraesCS5D01G143000 chr3D 100.000 34 0 0 2787 2820 60821950 60821983 2.930000e-06 63.9
26 TraesCS5D01G143000 chr2B 85.965 57 6 2 2786 2841 784187277 784187222 3.800000e-05 60.2
27 TraesCS5D01G143000 chr4B 100.000 30 0 0 2791 2820 54321788 54321817 4.910000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G143000 chr5D 228957523 228961043 3520 True 6503.000000 6503 100.000 1 3521 1 chr5D.!!$R2 3520
1 TraesCS5D01G143000 chr5D 243807177 243809126 1949 False 1779.000000 1779 83.376 603 2528 1 chr5D.!!$F3 1925
2 TraesCS5D01G143000 chr5A 327916684 327918633 1949 False 1762.000000 1762 83.223 603 2528 1 chr5A.!!$F1 1925
3 TraesCS5D01G143000 chr5A 327907695 327911322 3627 False 1643.333333 3705 91.804 360 2934 3 chr5A.!!$F4 2574
4 TraesCS5D01G143000 chr5B 276899433 276902204 2771 False 1899.000000 3448 89.902 573 3298 2 chr5B.!!$F2 2725
5 TraesCS5D01G143000 chr5B 276906338 276907966 1628 False 1417.000000 1417 82.619 920 2528 1 chr5B.!!$F1 1608

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
33 34 0.028902 CGTGAGATGCATGCACATGG 59.971 55.000 25.37 9.19 39.16 3.66 F
117 118 0.163788 ATGACAACTTTCGCGCTTCG 59.836 50.000 5.56 0.00 40.15 3.79 F
425 426 0.178975 TTTTGGCCCACTGTCGGAAT 60.179 50.000 0.00 0.00 0.00 3.01 F
426 427 0.693622 TTTGGCCCACTGTCGGAATA 59.306 50.000 0.00 0.00 0.00 1.75 F
428 429 0.693622 TGGCCCACTGTCGGAATAAA 59.306 50.000 0.00 0.00 0.00 1.40 F
429 430 1.074084 TGGCCCACTGTCGGAATAAAA 59.926 47.619 0.00 0.00 0.00 1.52 F
2299 3511 1.138661 CTGATGAGGAGAAGGAGCACC 59.861 57.143 0.00 0.00 0.00 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1935 1947 0.179020 CAAGAAGTGCACCCCAGACA 60.179 55.000 14.63 0.0 0.00 3.41 R
2242 2254 3.640029 CCTATGGCTTTCATTTCCATGCT 59.360 43.478 3.46 0.0 40.52 3.79 R
2318 3530 0.665835 AAATGCAACGGCGAGTTTCA 59.334 45.000 16.62 0.0 45.35 2.69 R
2478 3690 3.693085 AGCAACTGCCATATCTGAAACAG 59.307 43.478 0.00 0.0 43.38 3.16 R
2488 3700 4.635765 GTCATTACAAGAGCAACTGCCATA 59.364 41.667 0.00 0.0 43.38 2.74 R
2494 3706 5.012148 ACCAGTAGTCATTACAAGAGCAACT 59.988 40.000 0.00 0.0 34.56 3.16 R
3321 4584 0.102481 GCACGCCGGAGAGAAAGATA 59.898 55.000 13.83 0.0 0.00 1.98 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.993905 TGATAAGTACCACACGTGAGATG 58.006 43.478 25.01 10.31 0.00 2.90
23 24 2.080286 AAGTACCACACGTGAGATGC 57.920 50.000 25.01 4.59 0.00 3.91
24 25 0.966179 AGTACCACACGTGAGATGCA 59.034 50.000 25.01 0.00 0.00 3.96
25 26 1.550524 AGTACCACACGTGAGATGCAT 59.449 47.619 25.01 0.00 0.00 3.96
26 27 1.660607 GTACCACACGTGAGATGCATG 59.339 52.381 25.01 7.88 39.48 4.06
27 28 1.300971 ACCACACGTGAGATGCATGC 61.301 55.000 25.01 11.82 36.99 4.06
28 29 1.300266 CCACACGTGAGATGCATGCA 61.300 55.000 25.04 25.04 36.99 3.96
29 30 0.179207 CACACGTGAGATGCATGCAC 60.179 55.000 25.37 16.77 36.99 4.57
30 31 0.603439 ACACGTGAGATGCATGCACA 60.603 50.000 25.37 14.36 36.99 4.57
31 32 0.730840 CACGTGAGATGCATGCACAT 59.269 50.000 25.37 14.92 36.99 3.21
32 33 0.730840 ACGTGAGATGCATGCACATG 59.269 50.000 25.37 22.78 41.60 3.21
33 34 0.028902 CGTGAGATGCATGCACATGG 59.971 55.000 25.37 9.19 39.16 3.66
34 35 0.248907 GTGAGATGCATGCACATGGC 60.249 55.000 25.37 11.43 45.13 4.40
45 46 1.621107 GCACATGGCAACTTCGAATG 58.379 50.000 0.00 0.00 43.97 2.67
46 47 1.068333 GCACATGGCAACTTCGAATGT 60.068 47.619 0.00 0.00 43.97 2.71
47 48 2.607771 GCACATGGCAACTTCGAATGTT 60.608 45.455 0.00 2.71 43.97 2.71
48 49 3.641648 CACATGGCAACTTCGAATGTTT 58.358 40.909 0.00 0.00 37.61 2.83
49 50 4.050553 CACATGGCAACTTCGAATGTTTT 58.949 39.130 0.00 0.00 37.61 2.43
50 51 4.148696 CACATGGCAACTTCGAATGTTTTC 59.851 41.667 0.00 1.61 37.61 2.29
51 52 2.993545 TGGCAACTTCGAATGTTTTCG 58.006 42.857 0.00 1.86 46.89 3.46
64 65 6.617289 GAATGTTTTCGATGGCAAGTTTAG 57.383 37.500 0.00 0.00 0.00 1.85
65 66 5.705609 ATGTTTTCGATGGCAAGTTTAGT 57.294 34.783 0.00 0.00 0.00 2.24
66 67 5.508200 TGTTTTCGATGGCAAGTTTAGTT 57.492 34.783 0.00 0.00 0.00 2.24
67 68 6.621316 TGTTTTCGATGGCAAGTTTAGTTA 57.379 33.333 0.00 0.00 0.00 2.24
68 69 6.432107 TGTTTTCGATGGCAAGTTTAGTTAC 58.568 36.000 0.00 0.00 0.00 2.50
69 70 6.038382 TGTTTTCGATGGCAAGTTTAGTTACA 59.962 34.615 0.00 0.00 0.00 2.41
70 71 5.600908 TTCGATGGCAAGTTTAGTTACAC 57.399 39.130 0.00 0.00 0.00 2.90
71 72 4.633175 TCGATGGCAAGTTTAGTTACACA 58.367 39.130 0.00 0.00 0.00 3.72
72 73 5.057819 TCGATGGCAAGTTTAGTTACACAA 58.942 37.500 0.00 0.00 0.00 3.33
73 74 5.178623 TCGATGGCAAGTTTAGTTACACAAG 59.821 40.000 0.00 0.00 0.00 3.16
74 75 5.178623 CGATGGCAAGTTTAGTTACACAAGA 59.821 40.000 0.00 0.00 0.00 3.02
75 76 6.293190 CGATGGCAAGTTTAGTTACACAAGAA 60.293 38.462 0.00 0.00 0.00 2.52
76 77 6.952773 TGGCAAGTTTAGTTACACAAGAAT 57.047 33.333 0.00 0.00 0.00 2.40
77 78 8.630054 ATGGCAAGTTTAGTTACACAAGAATA 57.370 30.769 0.00 0.00 0.00 1.75
78 79 8.630054 TGGCAAGTTTAGTTACACAAGAATAT 57.370 30.769 0.00 0.00 0.00 1.28
79 80 8.511321 TGGCAAGTTTAGTTACACAAGAATATG 58.489 33.333 0.00 0.00 0.00 1.78
80 81 7.968405 GGCAAGTTTAGTTACACAAGAATATGG 59.032 37.037 0.00 0.00 0.00 2.74
81 82 8.726988 GCAAGTTTAGTTACACAAGAATATGGA 58.273 33.333 0.00 0.00 0.00 3.41
97 98 9.860898 AAGAATATGGAAAATAAGTTGACAAGC 57.139 29.630 0.00 0.00 0.00 4.01
98 99 9.023962 AGAATATGGAAAATAAGTTGACAAGCA 57.976 29.630 0.00 0.00 0.00 3.91
99 100 9.807649 GAATATGGAAAATAAGTTGACAAGCAT 57.192 29.630 0.00 0.00 0.00 3.79
100 101 9.590451 AATATGGAAAATAAGTTGACAAGCATG 57.410 29.630 0.00 0.00 0.00 4.06
101 102 6.647334 TGGAAAATAAGTTGACAAGCATGA 57.353 33.333 0.00 0.00 0.00 3.07
102 103 6.446318 TGGAAAATAAGTTGACAAGCATGAC 58.554 36.000 0.00 0.00 0.00 3.06
103 104 6.040278 TGGAAAATAAGTTGACAAGCATGACA 59.960 34.615 0.00 0.00 0.00 3.58
104 105 6.922957 GGAAAATAAGTTGACAAGCATGACAA 59.077 34.615 2.79 2.79 38.56 3.18
110 111 3.607422 TGACAAGCATGACAACTTTCG 57.393 42.857 0.00 0.00 0.00 3.46
111 112 2.286950 TGACAAGCATGACAACTTTCGC 60.287 45.455 0.00 0.00 0.00 4.70
112 113 1.321016 CAAGCATGACAACTTTCGCG 58.679 50.000 0.00 0.00 0.00 5.87
113 114 0.385974 AAGCATGACAACTTTCGCGC 60.386 50.000 0.00 0.00 0.00 6.86
114 115 1.207593 GCATGACAACTTTCGCGCT 59.792 52.632 5.56 0.00 0.00 5.92
115 116 0.385974 GCATGACAACTTTCGCGCTT 60.386 50.000 5.56 0.00 0.00 4.68
116 117 1.595609 CATGACAACTTTCGCGCTTC 58.404 50.000 5.56 0.00 0.00 3.86
117 118 0.163788 ATGACAACTTTCGCGCTTCG 59.836 50.000 5.56 0.00 40.15 3.79
118 119 1.154654 GACAACTTTCGCGCTTCGG 60.155 57.895 5.56 0.00 39.05 4.30
119 120 1.828331 GACAACTTTCGCGCTTCGGT 61.828 55.000 5.56 0.00 39.05 4.69
120 121 1.278637 CAACTTTCGCGCTTCGGTT 59.721 52.632 5.56 2.77 39.05 4.44
121 122 0.316689 CAACTTTCGCGCTTCGGTTT 60.317 50.000 5.56 0.00 39.05 3.27
122 123 1.070443 CAACTTTCGCGCTTCGGTTTA 60.070 47.619 5.56 0.00 39.05 2.01
123 124 1.435577 ACTTTCGCGCTTCGGTTTAT 58.564 45.000 5.56 0.00 39.05 1.40
124 125 1.802365 ACTTTCGCGCTTCGGTTTATT 59.198 42.857 5.56 0.00 39.05 1.40
125 126 2.224784 ACTTTCGCGCTTCGGTTTATTT 59.775 40.909 5.56 0.00 39.05 1.40
126 127 2.973419 TTCGCGCTTCGGTTTATTTT 57.027 40.000 5.56 0.00 39.05 1.82
127 128 2.973419 TCGCGCTTCGGTTTATTTTT 57.027 40.000 5.56 0.00 39.05 1.94
128 129 2.576406 TCGCGCTTCGGTTTATTTTTG 58.424 42.857 5.56 0.00 39.05 2.44
129 130 2.223611 TCGCGCTTCGGTTTATTTTTGA 59.776 40.909 5.56 0.00 39.05 2.69
130 131 3.120130 TCGCGCTTCGGTTTATTTTTGAT 60.120 39.130 5.56 0.00 39.05 2.57
131 132 4.093115 TCGCGCTTCGGTTTATTTTTGATA 59.907 37.500 5.56 0.00 39.05 2.15
132 133 4.789119 CGCGCTTCGGTTTATTTTTGATAA 59.211 37.500 5.56 0.00 33.78 1.75
133 134 5.284188 CGCGCTTCGGTTTATTTTTGATAAA 59.716 36.000 5.56 0.00 33.78 1.40
134 135 6.183359 CGCGCTTCGGTTTATTTTTGATAAAA 60.183 34.615 5.56 0.00 34.68 1.52
135 136 7.503165 GCGCTTCGGTTTATTTTTGATAAAAA 58.497 30.769 0.00 2.39 43.76 1.94
136 137 7.473104 GCGCTTCGGTTTATTTTTGATAAAAAC 59.527 33.333 0.00 0.00 42.57 2.43
137 138 8.696175 CGCTTCGGTTTATTTTTGATAAAAACT 58.304 29.630 1.97 0.00 42.57 2.66
141 142 8.766151 TCGGTTTATTTTTGATAAAAACTTGCC 58.234 29.630 1.97 3.20 42.57 4.52
142 143 7.738176 CGGTTTATTTTTGATAAAAACTTGCCG 59.262 33.333 14.12 14.12 42.57 5.69
143 144 8.552865 GGTTTATTTTTGATAAAAACTTGCCGT 58.447 29.630 1.97 0.00 42.57 5.68
144 145 9.364110 GTTTATTTTTGATAAAAACTTGCCGTG 57.636 29.630 1.97 0.00 42.57 4.94
145 146 8.649973 TTATTTTTGATAAAAACTTGCCGTGT 57.350 26.923 1.97 0.00 42.57 4.49
146 147 5.957910 TTTTGATAAAAACTTGCCGTGTG 57.042 34.783 0.00 0.00 0.00 3.82
147 148 4.640789 TTGATAAAAACTTGCCGTGTGT 57.359 36.364 0.00 0.00 0.00 3.72
148 149 4.217754 TGATAAAAACTTGCCGTGTGTC 57.782 40.909 0.00 0.00 0.00 3.67
149 150 2.741122 TAAAAACTTGCCGTGTGTCG 57.259 45.000 0.00 0.00 39.52 4.35
150 151 0.524604 AAAAACTTGCCGTGTGTCGC 60.525 50.000 0.00 0.00 38.35 5.19
151 152 1.373590 AAAACTTGCCGTGTGTCGCT 61.374 50.000 0.00 0.00 38.35 4.93
152 153 2.047151 AAACTTGCCGTGTGTCGCTG 62.047 55.000 0.00 0.00 38.35 5.18
153 154 4.374702 CTTGCCGTGTGTCGCTGC 62.375 66.667 0.00 0.00 38.35 5.25
156 157 3.726517 GCCGTGTGTCGCTGCAAT 61.727 61.111 0.00 0.00 38.35 3.56
157 158 2.945984 CCGTGTGTCGCTGCAATT 59.054 55.556 0.00 0.00 38.35 2.32
158 159 1.282570 CCGTGTGTCGCTGCAATTT 59.717 52.632 0.00 0.00 38.35 1.82
159 160 0.998226 CCGTGTGTCGCTGCAATTTG 60.998 55.000 0.00 0.00 38.35 2.32
160 161 0.316937 CGTGTGTCGCTGCAATTTGT 60.317 50.000 0.00 0.00 0.00 2.83
161 162 1.398595 GTGTGTCGCTGCAATTTGTC 58.601 50.000 0.00 0.00 0.00 3.18
162 163 1.020437 TGTGTCGCTGCAATTTGTCA 58.980 45.000 0.00 0.00 0.00 3.58
163 164 1.608109 TGTGTCGCTGCAATTTGTCAT 59.392 42.857 0.00 0.00 0.00 3.06
164 165 2.245096 GTGTCGCTGCAATTTGTCATC 58.755 47.619 0.00 0.00 0.00 2.92
165 166 1.199789 TGTCGCTGCAATTTGTCATCC 59.800 47.619 0.00 0.00 0.00 3.51
166 167 1.470098 GTCGCTGCAATTTGTCATCCT 59.530 47.619 0.00 0.00 0.00 3.24
167 168 2.095059 GTCGCTGCAATTTGTCATCCTT 60.095 45.455 0.00 0.00 0.00 3.36
168 169 2.095110 TCGCTGCAATTTGTCATCCTTG 60.095 45.455 0.00 0.00 0.00 3.61
169 170 1.997606 GCTGCAATTTGTCATCCTTGC 59.002 47.619 0.00 7.30 43.25 4.01
171 172 3.965379 TGCAATTTGTCATCCTTGCAT 57.035 38.095 11.18 0.00 46.43 3.96
172 173 3.591023 TGCAATTTGTCATCCTTGCATG 58.409 40.909 11.18 0.00 46.43 4.06
173 174 3.258622 TGCAATTTGTCATCCTTGCATGA 59.741 39.130 11.18 0.00 46.43 3.07
180 181 4.978083 GTCATCCTTGCATGACTGAAAT 57.022 40.909 10.29 0.00 46.37 2.17
181 182 5.320549 GTCATCCTTGCATGACTGAAATT 57.679 39.130 10.29 0.00 46.37 1.82
182 183 5.100259 GTCATCCTTGCATGACTGAAATTG 58.900 41.667 10.29 0.00 46.37 2.32
183 184 4.768448 TCATCCTTGCATGACTGAAATTGT 59.232 37.500 0.00 0.00 0.00 2.71
184 185 4.771590 TCCTTGCATGACTGAAATTGTC 57.228 40.909 0.00 0.00 35.21 3.18
185 186 4.143543 TCCTTGCATGACTGAAATTGTCA 58.856 39.130 0.00 0.11 46.58 3.58
195 196 5.906838 TGACTGAAATTGTCATCGAAAAACG 59.093 36.000 0.00 0.00 39.23 3.60
196 197 5.816919 ACTGAAATTGTCATCGAAAAACGT 58.183 33.333 0.00 0.00 35.07 3.99
197 198 6.262601 ACTGAAATTGTCATCGAAAAACGTT 58.737 32.000 0.00 0.00 35.07 3.99
198 199 7.411274 ACTGAAATTGTCATCGAAAAACGTTA 58.589 30.769 0.00 0.00 35.07 3.18
199 200 7.911205 ACTGAAATTGTCATCGAAAAACGTTAA 59.089 29.630 0.00 0.00 35.07 2.01
200 201 8.264022 TGAAATTGTCATCGAAAAACGTTAAG 57.736 30.769 0.00 0.00 43.13 1.85
201 202 7.377397 TGAAATTGTCATCGAAAAACGTTAAGG 59.623 33.333 0.00 0.00 43.13 2.69
202 203 4.136517 TGTCATCGAAAAACGTTAAGGC 57.863 40.909 0.00 0.00 43.13 4.35
203 204 3.058777 TGTCATCGAAAAACGTTAAGGCC 60.059 43.478 0.00 0.00 43.13 5.19
204 205 3.058777 GTCATCGAAAAACGTTAAGGCCA 60.059 43.478 5.01 0.00 43.13 5.36
205 206 3.187637 TCATCGAAAAACGTTAAGGCCAG 59.812 43.478 5.01 0.00 43.13 4.85
206 207 2.836262 TCGAAAAACGTTAAGGCCAGA 58.164 42.857 5.01 0.00 43.13 3.86
207 208 2.803956 TCGAAAAACGTTAAGGCCAGAG 59.196 45.455 5.01 0.00 43.13 3.35
208 209 2.546789 CGAAAAACGTTAAGGCCAGAGT 59.453 45.455 5.01 0.00 37.22 3.24
209 210 3.606153 CGAAAAACGTTAAGGCCAGAGTG 60.606 47.826 5.01 0.00 37.22 3.51
210 211 1.235724 AAACGTTAAGGCCAGAGTGC 58.764 50.000 5.01 0.00 0.00 4.40
231 232 3.319904 GCACCTGACGTGTGACAC 58.680 61.111 5.47 5.47 44.97 3.67
232 233 1.227263 GCACCTGACGTGTGACACT 60.227 57.895 14.42 0.63 44.97 3.55
233 234 0.810031 GCACCTGACGTGTGACACTT 60.810 55.000 14.42 3.90 44.97 3.16
234 235 1.537348 GCACCTGACGTGTGACACTTA 60.537 52.381 14.42 0.00 44.97 2.24
235 236 2.866460 GCACCTGACGTGTGACACTTAT 60.866 50.000 14.42 0.00 44.97 1.73
236 237 3.390135 CACCTGACGTGTGACACTTATT 58.610 45.455 14.42 0.00 37.73 1.40
237 238 4.552355 CACCTGACGTGTGACACTTATTA 58.448 43.478 14.42 0.00 37.73 0.98
238 239 5.168569 CACCTGACGTGTGACACTTATTAT 58.831 41.667 14.42 0.00 37.73 1.28
239 240 5.637810 CACCTGACGTGTGACACTTATTATT 59.362 40.000 14.42 0.00 37.73 1.40
240 241 6.147164 CACCTGACGTGTGACACTTATTATTT 59.853 38.462 14.42 0.00 37.73 1.40
241 242 6.147164 ACCTGACGTGTGACACTTATTATTTG 59.853 38.462 14.42 0.00 31.34 2.32
242 243 6.367695 CCTGACGTGTGACACTTATTATTTGA 59.632 38.462 14.42 0.00 31.34 2.69
243 244 7.095397 CCTGACGTGTGACACTTATTATTTGAA 60.095 37.037 14.42 0.00 31.34 2.69
244 245 8.317891 TGACGTGTGACACTTATTATTTGAAT 57.682 30.769 14.42 0.00 31.34 2.57
245 246 9.425577 TGACGTGTGACACTTATTATTTGAATA 57.574 29.630 14.42 0.00 31.34 1.75
304 305 9.275398 TGTATCGTTTTTCTTTGTATAAGTGGT 57.725 29.630 0.00 0.00 0.00 4.16
305 306 9.750882 GTATCGTTTTTCTTTGTATAAGTGGTC 57.249 33.333 0.00 0.00 0.00 4.02
306 307 7.789273 TCGTTTTTCTTTGTATAAGTGGTCA 57.211 32.000 0.00 0.00 0.00 4.02
307 308 8.211116 TCGTTTTTCTTTGTATAAGTGGTCAA 57.789 30.769 0.00 0.00 0.00 3.18
308 309 8.124199 TCGTTTTTCTTTGTATAAGTGGTCAAC 58.876 33.333 0.00 0.00 0.00 3.18
309 310 7.377662 CGTTTTTCTTTGTATAAGTGGTCAACC 59.622 37.037 0.00 0.00 0.00 3.77
310 311 8.410912 GTTTTTCTTTGTATAAGTGGTCAACCT 58.589 33.333 0.10 0.00 36.82 3.50
311 312 9.629878 TTTTTCTTTGTATAAGTGGTCAACCTA 57.370 29.630 0.10 0.00 36.82 3.08
312 313 8.842358 TTTCTTTGTATAAGTGGTCAACCTAG 57.158 34.615 0.10 0.00 36.82 3.02
313 314 7.549147 TCTTTGTATAAGTGGTCAACCTAGT 57.451 36.000 0.10 0.00 36.82 2.57
314 315 8.654485 TCTTTGTATAAGTGGTCAACCTAGTA 57.346 34.615 0.10 0.00 36.82 1.82
315 316 8.526147 TCTTTGTATAAGTGGTCAACCTAGTAC 58.474 37.037 0.10 0.00 36.82 2.73
316 317 7.779754 TTGTATAAGTGGTCAACCTAGTACA 57.220 36.000 0.10 1.28 36.82 2.90
317 318 7.779754 TGTATAAGTGGTCAACCTAGTACAA 57.220 36.000 0.10 0.00 36.82 2.41
318 319 7.605449 TGTATAAGTGGTCAACCTAGTACAAC 58.395 38.462 0.10 0.00 36.82 3.32
319 320 6.675413 ATAAGTGGTCAACCTAGTACAACA 57.325 37.500 0.10 0.00 36.82 3.33
320 321 5.362105 AAGTGGTCAACCTAGTACAACAA 57.638 39.130 0.10 0.00 36.82 2.83
321 322 5.362105 AGTGGTCAACCTAGTACAACAAA 57.638 39.130 0.10 0.00 36.82 2.83
322 323 5.365619 AGTGGTCAACCTAGTACAACAAAG 58.634 41.667 0.10 0.00 36.82 2.77
323 324 5.129815 AGTGGTCAACCTAGTACAACAAAGA 59.870 40.000 0.10 0.00 36.82 2.52
324 325 5.235831 GTGGTCAACCTAGTACAACAAAGAC 59.764 44.000 0.10 0.00 36.82 3.01
325 326 5.129815 TGGTCAACCTAGTACAACAAAGACT 59.870 40.000 0.10 0.00 36.82 3.24
326 327 6.324512 TGGTCAACCTAGTACAACAAAGACTA 59.675 38.462 0.10 0.00 36.82 2.59
327 328 7.015877 TGGTCAACCTAGTACAACAAAGACTAT 59.984 37.037 0.10 0.00 36.82 2.12
328 329 7.876582 GGTCAACCTAGTACAACAAAGACTATT 59.123 37.037 0.00 0.00 0.00 1.73
329 330 8.923683 GTCAACCTAGTACAACAAAGACTATTC 58.076 37.037 0.00 0.00 0.00 1.75
330 331 8.867097 TCAACCTAGTACAACAAAGACTATTCT 58.133 33.333 0.00 0.00 0.00 2.40
331 332 9.490379 CAACCTAGTACAACAAAGACTATTCTT 57.510 33.333 0.00 0.00 44.53 2.52
352 353 8.608844 TTCTTATGTTTTCTCTCTTTCACCTC 57.391 34.615 0.00 0.00 0.00 3.85
353 354 7.735917 TCTTATGTTTTCTCTCTTTCACCTCA 58.264 34.615 0.00 0.00 0.00 3.86
354 355 7.875041 TCTTATGTTTTCTCTCTTTCACCTCAG 59.125 37.037 0.00 0.00 0.00 3.35
355 356 4.130118 TGTTTTCTCTCTTTCACCTCAGC 58.870 43.478 0.00 0.00 0.00 4.26
356 357 4.130118 GTTTTCTCTCTTTCACCTCAGCA 58.870 43.478 0.00 0.00 0.00 4.41
357 358 4.422073 TTTCTCTCTTTCACCTCAGCAA 57.578 40.909 0.00 0.00 0.00 3.91
358 359 4.630644 TTCTCTCTTTCACCTCAGCAAT 57.369 40.909 0.00 0.00 0.00 3.56
359 360 4.199432 TCTCTCTTTCACCTCAGCAATC 57.801 45.455 0.00 0.00 0.00 2.67
360 361 3.837146 TCTCTCTTTCACCTCAGCAATCT 59.163 43.478 0.00 0.00 0.00 2.40
361 362 5.019470 TCTCTCTTTCACCTCAGCAATCTA 58.981 41.667 0.00 0.00 0.00 1.98
362 363 5.660417 TCTCTCTTTCACCTCAGCAATCTAT 59.340 40.000 0.00 0.00 0.00 1.98
363 364 5.668471 TCTCTTTCACCTCAGCAATCTATG 58.332 41.667 0.00 0.00 0.00 2.23
364 365 5.188555 TCTCTTTCACCTCAGCAATCTATGT 59.811 40.000 0.00 0.00 0.00 2.29
365 366 5.423015 TCTTTCACCTCAGCAATCTATGTC 58.577 41.667 0.00 0.00 0.00 3.06
366 367 5.188555 TCTTTCACCTCAGCAATCTATGTCT 59.811 40.000 0.00 0.00 0.00 3.41
371 372 2.871022 CTCAGCAATCTATGTCTGTGCC 59.129 50.000 0.00 0.00 35.77 5.01
386 387 4.214332 GTCTGTGCCAAGTTAAGAAAGGAG 59.786 45.833 0.00 0.00 0.00 3.69
397 398 9.455847 CAAGTTAAGAAAGGAGAATTTTGTCAG 57.544 33.333 0.00 0.00 0.00 3.51
420 421 2.979814 AAAAGTTTTGGCCCACTGTC 57.020 45.000 0.00 0.00 0.00 3.51
421 422 0.744281 AAAGTTTTGGCCCACTGTCG 59.256 50.000 0.00 0.00 0.00 4.35
422 423 1.106944 AAGTTTTGGCCCACTGTCGG 61.107 55.000 0.00 0.00 0.00 4.79
423 424 1.527380 GTTTTGGCCCACTGTCGGA 60.527 57.895 0.00 0.00 0.00 4.55
424 425 1.104577 GTTTTGGCCCACTGTCGGAA 61.105 55.000 0.00 0.00 0.00 4.30
425 426 0.178975 TTTTGGCCCACTGTCGGAAT 60.179 50.000 0.00 0.00 0.00 3.01
426 427 0.693622 TTTGGCCCACTGTCGGAATA 59.306 50.000 0.00 0.00 0.00 1.75
427 428 0.693622 TTGGCCCACTGTCGGAATAA 59.306 50.000 0.00 0.00 0.00 1.40
428 429 0.693622 TGGCCCACTGTCGGAATAAA 59.306 50.000 0.00 0.00 0.00 1.40
429 430 1.074084 TGGCCCACTGTCGGAATAAAA 59.926 47.619 0.00 0.00 0.00 1.52
430 431 1.471287 GGCCCACTGTCGGAATAAAAC 59.529 52.381 0.00 0.00 0.00 2.43
431 432 2.433436 GCCCACTGTCGGAATAAAACT 58.567 47.619 0.00 0.00 0.00 2.66
432 433 3.602483 GCCCACTGTCGGAATAAAACTA 58.398 45.455 0.00 0.00 0.00 2.24
433 434 4.196971 GCCCACTGTCGGAATAAAACTAT 58.803 43.478 0.00 0.00 0.00 2.12
435 436 4.814771 CCCACTGTCGGAATAAAACTATCC 59.185 45.833 0.00 0.00 0.00 2.59
496 497 2.993449 GAGAGACGTCTCCTTCGTTT 57.007 50.000 35.83 19.65 43.26 3.60
517 528 2.968574 TCTCTCCACAATCCATCCTAGC 59.031 50.000 0.00 0.00 0.00 3.42
523 534 3.370846 CCACAATCCATCCTAGCTTCACA 60.371 47.826 0.00 0.00 0.00 3.58
524 535 3.624861 CACAATCCATCCTAGCTTCACAC 59.375 47.826 0.00 0.00 0.00 3.82
549 561 9.750125 ACTAAAATGGAAGTGTTGAGAAAATTC 57.250 29.630 0.00 0.00 0.00 2.17
722 734 3.209812 CCGTCTCGGCATCCTCGA 61.210 66.667 0.00 0.00 41.17 4.04
924 936 2.284699 CCTTCCGACTCCACCCCT 60.285 66.667 0.00 0.00 0.00 4.79
1197 1209 2.665603 GAGGCAGTGTGGAGGACC 59.334 66.667 0.00 0.00 0.00 4.46
1215 1227 3.934962 GCAGAGCGGGAGGGGATC 61.935 72.222 0.00 0.00 0.00 3.36
1216 1228 2.444706 CAGAGCGGGAGGGGATCA 60.445 66.667 0.00 0.00 0.00 2.92
1258 1270 2.093181 ACTGCAGCGGTGGATTTGTATA 60.093 45.455 15.27 0.00 0.00 1.47
1300 1312 1.179174 GGCAAGGGAGGTGTTTGACC 61.179 60.000 0.00 0.00 46.58 4.02
1713 1725 1.198713 GCCAGATGGAGAAGTCAGGA 58.801 55.000 2.18 0.00 37.39 3.86
1855 1867 3.945981 TTGAGCACTACGGTTGTATGA 57.054 42.857 0.00 0.00 0.00 2.15
1860 1872 3.318275 AGCACTACGGTTGTATGATCGAT 59.682 43.478 0.00 0.00 0.00 3.59
2273 2285 6.909550 AATGAAAGCCATAGGTTACAAACA 57.090 33.333 0.00 0.00 34.45 2.83
2299 3511 1.138661 CTGATGAGGAGAAGGAGCACC 59.861 57.143 0.00 0.00 0.00 5.01
2318 3530 1.478510 CCCTCTAGTTCATCACAGCGT 59.521 52.381 0.00 0.00 0.00 5.07
2325 3537 2.802816 AGTTCATCACAGCGTGAAACTC 59.197 45.455 16.23 9.25 45.96 3.01
2478 3690 3.531538 TCGGGATAACAGCAGATTTCAC 58.468 45.455 0.00 0.00 0.00 3.18
2488 3700 5.068636 ACAGCAGATTTCACTGTTTCAGAT 58.931 37.500 3.70 0.00 41.78 2.90
2493 3705 6.493116 CAGATTTCACTGTTTCAGATATGGC 58.507 40.000 3.70 0.00 35.18 4.40
2494 3706 6.094464 CAGATTTCACTGTTTCAGATATGGCA 59.906 38.462 3.70 0.00 35.18 4.92
2610 3822 9.704098 GTTAGCTAGATTTTTAGTTACACATGC 57.296 33.333 0.00 0.00 0.00 4.06
2611 3823 7.321745 AGCTAGATTTTTAGTTACACATGCC 57.678 36.000 0.00 0.00 0.00 4.40
2612 3824 6.037172 AGCTAGATTTTTAGTTACACATGCCG 59.963 38.462 0.00 0.00 0.00 5.69
2625 3843 3.572255 ACACATGCCGTATTGAGGTTTTT 59.428 39.130 0.00 0.00 0.00 1.94
2667 3885 4.331168 GCTGTAAGTAATCTGAAGGTGCTG 59.669 45.833 0.00 0.00 35.30 4.41
2729 3947 3.827876 TCTCAATGCTGCTGAAATTTCCA 59.172 39.130 15.48 6.17 0.00 3.53
2736 3954 1.197812 GCTGAAATTTCCATGCCCCT 58.802 50.000 15.48 0.00 0.00 4.79
2740 3958 4.323409 GCTGAAATTTCCATGCCCCTTTTA 60.323 41.667 15.48 0.00 0.00 1.52
2757 3975 7.172532 GCCCCTTTTAGTTGTTAAATTTCTTGG 59.827 37.037 0.00 0.00 31.57 3.61
2789 4007 4.069869 CTGGTGTTCAGGCCAGTG 57.930 61.111 5.01 0.00 45.28 3.66
2791 4009 2.113986 GGTGTTCAGGCCAGTGCT 59.886 61.111 5.01 0.00 37.74 4.40
2793 4011 0.674895 GGTGTTCAGGCCAGTGCTAG 60.675 60.000 5.01 0.00 37.74 3.42
2794 4012 0.321671 GTGTTCAGGCCAGTGCTAGA 59.678 55.000 5.01 0.00 37.74 2.43
2795 4013 1.065854 GTGTTCAGGCCAGTGCTAGAT 60.066 52.381 5.01 0.00 37.74 1.98
2796 4014 2.168521 GTGTTCAGGCCAGTGCTAGATA 59.831 50.000 5.01 0.00 37.74 1.98
2798 4016 2.159179 TCAGGCCAGTGCTAGATACA 57.841 50.000 5.01 0.00 37.74 2.29
2800 4018 3.041211 TCAGGCCAGTGCTAGATACATT 58.959 45.455 5.01 0.00 37.74 2.71
2804 4022 4.103785 AGGCCAGTGCTAGATACATTCATT 59.896 41.667 5.01 0.00 37.74 2.57
2805 4023 4.823989 GGCCAGTGCTAGATACATTCATTT 59.176 41.667 0.00 0.00 37.74 2.32
2808 4026 6.293298 GCCAGTGCTAGATACATTCATTTGAG 60.293 42.308 0.00 0.00 33.53 3.02
2809 4027 6.293298 CCAGTGCTAGATACATTCATTTGAGC 60.293 42.308 0.00 0.00 0.00 4.26
2811 4029 6.825213 AGTGCTAGATACATTCATTTGAGCAA 59.175 34.615 0.00 0.00 38.97 3.91
2812 4030 6.909357 GTGCTAGATACATTCATTTGAGCAAC 59.091 38.462 0.00 0.00 38.97 4.17
2814 4032 7.121020 TGCTAGATACATTCATTTGAGCAACAA 59.879 33.333 0.00 0.00 34.66 2.83
2815 4033 7.642978 GCTAGATACATTCATTTGAGCAACAAG 59.357 37.037 0.00 0.00 39.77 3.16
2816 4034 7.458409 AGATACATTCATTTGAGCAACAAGT 57.542 32.000 0.00 0.00 39.77 3.16
2817 4035 8.565896 AGATACATTCATTTGAGCAACAAGTA 57.434 30.769 0.00 0.00 39.77 2.24
2818 4036 9.013229 AGATACATTCATTTGAGCAACAAGTAA 57.987 29.630 0.00 0.00 39.77 2.24
2820 4038 9.793252 ATACATTCATTTGAGCAACAAGTAATC 57.207 29.630 0.00 0.00 39.77 1.75
2821 4039 7.092716 ACATTCATTTGAGCAACAAGTAATCC 58.907 34.615 0.00 0.00 39.77 3.01
2822 4040 5.643379 TCATTTGAGCAACAAGTAATCCC 57.357 39.130 0.00 0.00 39.77 3.85
2823 4041 4.155826 TCATTTGAGCAACAAGTAATCCCG 59.844 41.667 0.00 0.00 39.77 5.14
2824 4042 2.107950 TGAGCAACAAGTAATCCCGG 57.892 50.000 0.00 0.00 0.00 5.73
2825 4043 1.626321 TGAGCAACAAGTAATCCCGGA 59.374 47.619 0.73 0.00 0.00 5.14
2826 4044 2.007608 GAGCAACAAGTAATCCCGGAC 58.992 52.381 0.73 0.00 0.00 4.79
2828 4046 1.365699 CAACAAGTAATCCCGGACGG 58.634 55.000 0.73 3.25 0.00 4.79
2830 4048 0.822164 ACAAGTAATCCCGGACGGAG 59.178 55.000 13.13 2.58 46.60 4.63
2831 4049 0.104304 CAAGTAATCCCGGACGGAGG 59.896 60.000 13.13 0.00 46.60 4.30
2832 4050 0.032813 AAGTAATCCCGGACGGAGGA 60.033 55.000 13.13 2.01 46.60 3.71
2833 4051 0.032813 AGTAATCCCGGACGGAGGAA 60.033 55.000 13.13 0.00 46.60 3.36
2834 4052 0.388294 GTAATCCCGGACGGAGGAAG 59.612 60.000 13.13 0.00 46.60 3.46
2835 4053 0.032813 TAATCCCGGACGGAGGAAGT 60.033 55.000 13.13 0.00 46.60 3.01
2836 4054 0.032813 AATCCCGGACGGAGGAAGTA 60.033 55.000 13.13 0.00 46.60 2.24
2837 4055 0.187851 ATCCCGGACGGAGGAAGTAT 59.812 55.000 13.13 0.00 46.60 2.12
2838 4056 0.754217 TCCCGGACGGAGGAAGTATG 60.754 60.000 13.13 0.00 34.86 2.39
2839 4057 0.754217 CCCGGACGGAGGAAGTATGA 60.754 60.000 13.13 0.00 37.50 2.15
2840 4058 1.329256 CCGGACGGAGGAAGTATGAT 58.671 55.000 4.40 0.00 37.50 2.45
2841 4059 1.000163 CCGGACGGAGGAAGTATGATG 60.000 57.143 4.40 0.00 37.50 3.07
2842 4060 1.603172 CGGACGGAGGAAGTATGATGC 60.603 57.143 0.00 0.00 0.00 3.91
2843 4061 1.412710 GGACGGAGGAAGTATGATGCA 59.587 52.381 0.00 0.00 0.00 3.96
2844 4062 2.037772 GGACGGAGGAAGTATGATGCAT 59.962 50.000 0.00 0.00 0.00 3.96
2845 4063 3.062763 GACGGAGGAAGTATGATGCATG 58.937 50.000 2.46 0.00 0.00 4.06
2846 4064 2.700371 ACGGAGGAAGTATGATGCATGA 59.300 45.455 2.46 0.00 0.00 3.07
2847 4065 3.134623 ACGGAGGAAGTATGATGCATGAA 59.865 43.478 2.46 0.00 0.00 2.57
2848 4066 3.496130 CGGAGGAAGTATGATGCATGAAC 59.504 47.826 2.46 0.00 0.00 3.18
2849 4067 4.712476 GGAGGAAGTATGATGCATGAACT 58.288 43.478 2.46 1.17 0.00 3.01
2852 4070 4.337555 AGGAAGTATGATGCATGAACTTGC 59.662 41.667 20.26 20.26 43.07 4.01
2865 4083 5.922544 GCATGAACTTGCAGAATTAGTTGTT 59.077 36.000 5.48 0.00 42.31 2.83
2866 4084 6.129009 GCATGAACTTGCAGAATTAGTTGTTG 60.129 38.462 5.48 4.59 42.31 3.33
2871 4089 6.980593 ACTTGCAGAATTAGTTGTTGCAATA 58.019 32.000 15.34 0.00 39.54 1.90
2878 4096 8.863049 CAGAATTAGTTGTTGCAATATTTGACC 58.137 33.333 0.59 0.00 0.00 4.02
2883 4101 2.556189 TGTTGCAATATTTGACCTGCGT 59.444 40.909 0.59 0.00 37.62 5.24
2890 4108 0.877071 ATTTGACCTGCGTTGCTCAG 59.123 50.000 0.00 0.00 0.00 3.35
2917 4135 7.706281 CAGTTCATCTGTACATTATCAGGAC 57.294 40.000 0.00 0.00 39.17 3.85
2924 4142 4.430007 TGTACATTATCAGGACGAACTGC 58.570 43.478 0.00 0.00 38.36 4.40
2930 4148 2.941453 TCAGGACGAACTGCAGATAC 57.059 50.000 23.35 9.91 38.36 2.24
2937 4155 4.681942 GGACGAACTGCAGATACATATGAC 59.318 45.833 23.35 0.64 0.00 3.06
2940 4158 5.067805 ACGAACTGCAGATACATATGACTCA 59.932 40.000 23.35 5.79 0.00 3.41
2942 4160 6.143598 CGAACTGCAGATACATATGACTCAAG 59.856 42.308 23.35 7.23 0.00 3.02
2944 4162 5.600069 ACTGCAGATACATATGACTCAAGGA 59.400 40.000 23.35 3.47 0.00 3.36
2945 4163 6.269538 ACTGCAGATACATATGACTCAAGGAT 59.730 38.462 23.35 0.00 0.00 3.24
2947 4165 8.193953 TGCAGATACATATGACTCAAGGATAA 57.806 34.615 10.38 0.00 0.00 1.75
2958 4213 5.428457 TGACTCAAGGATAAGGCTAAATCCA 59.572 40.000 23.52 8.57 43.55 3.41
2990 4245 6.502074 ACCAATGCCTTTTTACCCTTTTTA 57.498 33.333 0.00 0.00 0.00 1.52
2991 4246 7.085476 ACCAATGCCTTTTTACCCTTTTTAT 57.915 32.000 0.00 0.00 0.00 1.40
2992 4247 7.522542 ACCAATGCCTTTTTACCCTTTTTATT 58.477 30.769 0.00 0.00 0.00 1.40
2993 4248 7.446931 ACCAATGCCTTTTTACCCTTTTTATTG 59.553 33.333 0.00 0.00 0.00 1.90
2994 4249 7.446931 CCAATGCCTTTTTACCCTTTTTATTGT 59.553 33.333 0.00 0.00 0.00 2.71
2995 4250 7.977789 ATGCCTTTTTACCCTTTTTATTGTG 57.022 32.000 0.00 0.00 0.00 3.33
2996 4251 7.125792 TGCCTTTTTACCCTTTTTATTGTGA 57.874 32.000 0.00 0.00 0.00 3.58
2998 4253 6.147164 GCCTTTTTACCCTTTTTATTGTGAGC 59.853 38.462 0.00 0.00 0.00 4.26
3039 4295 2.309755 TGCTTTCCAGGAATGTCCATCT 59.690 45.455 14.96 0.00 39.61 2.90
3040 4296 2.686915 GCTTTCCAGGAATGTCCATCTG 59.313 50.000 14.96 0.00 39.61 2.90
3041 4297 2.425143 TTCCAGGAATGTCCATCTGC 57.575 50.000 0.00 0.00 39.61 4.26
3042 4298 1.288188 TCCAGGAATGTCCATCTGCA 58.712 50.000 0.00 0.00 39.61 4.41
3043 4299 1.065199 TCCAGGAATGTCCATCTGCAC 60.065 52.381 0.00 0.00 39.61 4.57
3044 4300 1.064906 CCAGGAATGTCCATCTGCACT 60.065 52.381 0.00 0.00 39.61 4.40
3045 4301 2.619849 CCAGGAATGTCCATCTGCACTT 60.620 50.000 0.00 0.00 39.61 3.16
3046 4302 2.681848 CAGGAATGTCCATCTGCACTTC 59.318 50.000 0.00 0.00 39.61 3.01
3102 4364 4.725790 TTTACTTAGGTAACCGAGCTCC 57.274 45.455 8.47 0.00 37.61 4.70
3109 4371 2.103263 AGGTAACCGAGCTCCATCATTC 59.897 50.000 8.47 0.00 37.17 2.67
3120 4382 3.803021 GCTCCATCATTCAAGATCTCGCT 60.803 47.826 0.00 0.00 0.00 4.93
3134 4396 6.214191 AGATCTCGCTACTTGAAATTCAGA 57.786 37.500 0.00 0.00 0.00 3.27
3138 4400 4.442706 TCGCTACTTGAAATTCAGATCCC 58.557 43.478 0.00 0.00 0.00 3.85
3174 4436 3.961408 GAGTATCTCCAGCAGTTTCCCTA 59.039 47.826 0.00 0.00 0.00 3.53
3175 4437 4.561752 AGTATCTCCAGCAGTTTCCCTAT 58.438 43.478 0.00 0.00 0.00 2.57
3196 4458 7.545965 CCCTATAAAACTTCACCTATAGATGCG 59.454 40.741 0.00 0.00 0.00 4.73
3204 4466 3.576982 TCACCTATAGATGCGTTTAGGGG 59.423 47.826 0.00 9.66 36.71 4.79
3205 4467 2.302157 ACCTATAGATGCGTTTAGGGGC 59.698 50.000 0.00 0.00 36.36 5.80
3210 4472 1.134371 AGATGCGTTTAGGGGCTCTTC 60.134 52.381 0.00 0.00 0.00 2.87
3213 4475 0.744771 GCGTTTAGGGGCTCTTCCTG 60.745 60.000 0.00 0.00 35.92 3.86
3224 4486 5.253096 AGGGGCTCTTCCTGTAAAATTTCTA 59.747 40.000 0.00 0.00 32.53 2.10
3236 4498 7.230712 CCTGTAAAATTTCTAGGTGTGAAAGGT 59.769 37.037 0.00 0.00 36.94 3.50
3245 4507 1.476110 GGTGTGAAAGGTGTGTGGCTA 60.476 52.381 0.00 0.00 0.00 3.93
3248 4510 3.684788 GTGTGAAAGGTGTGTGGCTATAG 59.315 47.826 0.00 0.00 0.00 1.31
3258 4520 0.837272 GTGGCTATAGCAGTTCCCCA 59.163 55.000 25.53 9.98 44.36 4.96
3259 4521 1.131638 TGGCTATAGCAGTTCCCCAG 58.868 55.000 25.53 0.00 44.36 4.45
3275 4537 4.611367 TCCCCAGTAAACCTCTCTCTAAG 58.389 47.826 0.00 0.00 0.00 2.18
3277 4539 4.027437 CCCAGTAAACCTCTCTCTAAGCT 58.973 47.826 0.00 0.00 0.00 3.74
3278 4540 4.142049 CCCAGTAAACCTCTCTCTAAGCTG 60.142 50.000 0.00 0.00 0.00 4.24
3288 4551 2.961741 CTCTCTAAGCTGGCCTGACATA 59.038 50.000 14.77 1.87 0.00 2.29
3298 4561 3.949754 CTGGCCTGACATATGTGTTTCAT 59.050 43.478 14.43 0.00 39.09 2.57
3299 4562 3.695556 TGGCCTGACATATGTGTTTCATG 59.304 43.478 14.43 3.33 39.09 3.07
3300 4563 3.696051 GGCCTGACATATGTGTTTCATGT 59.304 43.478 14.43 0.00 39.09 3.21
3301 4564 4.439153 GGCCTGACATATGTGTTTCATGTG 60.439 45.833 14.43 3.71 46.41 3.21
3306 4569 4.944962 CATATGTGTTTCATGTGTCCGT 57.055 40.909 0.00 0.00 39.65 4.69
3307 4570 4.650985 CATATGTGTTTCATGTGTCCGTG 58.349 43.478 0.00 0.00 39.65 4.94
3308 4571 1.304254 TGTGTTTCATGTGTCCGTGG 58.696 50.000 0.00 0.00 0.00 4.94
3309 4572 0.040425 GTGTTTCATGTGTCCGTGGC 60.040 55.000 0.00 0.00 0.00 5.01
3310 4573 0.179032 TGTTTCATGTGTCCGTGGCT 60.179 50.000 0.00 0.00 0.00 4.75
3311 4574 1.070914 TGTTTCATGTGTCCGTGGCTA 59.929 47.619 0.00 0.00 0.00 3.93
3312 4575 2.147958 GTTTCATGTGTCCGTGGCTAA 58.852 47.619 0.00 0.00 0.00 3.09
3313 4576 2.747446 GTTTCATGTGTCCGTGGCTAAT 59.253 45.455 0.00 0.00 0.00 1.73
3314 4577 2.309528 TCATGTGTCCGTGGCTAATC 57.690 50.000 0.00 0.00 0.00 1.75
3315 4578 1.831106 TCATGTGTCCGTGGCTAATCT 59.169 47.619 0.00 0.00 0.00 2.40
3316 4579 2.159099 TCATGTGTCCGTGGCTAATCTC 60.159 50.000 0.00 0.00 0.00 2.75
3317 4580 1.557099 TGTGTCCGTGGCTAATCTCT 58.443 50.000 0.00 0.00 0.00 3.10
3318 4581 1.476891 TGTGTCCGTGGCTAATCTCTC 59.523 52.381 0.00 0.00 0.00 3.20
3319 4582 1.751924 GTGTCCGTGGCTAATCTCTCT 59.248 52.381 0.00 0.00 0.00 3.10
3320 4583 2.025155 TGTCCGTGGCTAATCTCTCTC 58.975 52.381 0.00 0.00 0.00 3.20
3321 4584 2.303175 GTCCGTGGCTAATCTCTCTCT 58.697 52.381 0.00 0.00 0.00 3.10
3322 4585 3.118000 TGTCCGTGGCTAATCTCTCTCTA 60.118 47.826 0.00 0.00 0.00 2.43
3323 4586 4.076394 GTCCGTGGCTAATCTCTCTCTAT 58.924 47.826 0.00 0.00 0.00 1.98
3324 4587 4.155280 GTCCGTGGCTAATCTCTCTCTATC 59.845 50.000 0.00 0.00 0.00 2.08
3325 4588 4.042311 TCCGTGGCTAATCTCTCTCTATCT 59.958 45.833 0.00 0.00 0.00 1.98
3326 4589 4.764823 CCGTGGCTAATCTCTCTCTATCTT 59.235 45.833 0.00 0.00 0.00 2.40
3327 4590 5.242838 CCGTGGCTAATCTCTCTCTATCTTT 59.757 44.000 0.00 0.00 0.00 2.52
3328 4591 6.378582 CGTGGCTAATCTCTCTCTATCTTTC 58.621 44.000 0.00 0.00 0.00 2.62
3329 4592 6.206634 CGTGGCTAATCTCTCTCTATCTTTCT 59.793 42.308 0.00 0.00 0.00 2.52
3330 4593 7.573096 CGTGGCTAATCTCTCTCTATCTTTCTC 60.573 44.444 0.00 0.00 0.00 2.87
3331 4594 7.448469 GTGGCTAATCTCTCTCTATCTTTCTCT 59.552 40.741 0.00 0.00 0.00 3.10
3332 4595 7.665559 TGGCTAATCTCTCTCTATCTTTCTCTC 59.334 40.741 0.00 0.00 0.00 3.20
3333 4596 7.121315 GGCTAATCTCTCTCTATCTTTCTCTCC 59.879 44.444 0.00 0.00 0.00 3.71
3334 4597 7.148407 GCTAATCTCTCTCTATCTTTCTCTCCG 60.148 44.444 0.00 0.00 0.00 4.63
3335 4598 4.968259 TCTCTCTCTATCTTTCTCTCCGG 58.032 47.826 0.00 0.00 0.00 5.14
3336 4599 3.482436 TCTCTCTATCTTTCTCTCCGGC 58.518 50.000 0.00 0.00 0.00 6.13
3337 4600 2.222886 TCTCTATCTTTCTCTCCGGCG 58.777 52.381 0.00 0.00 0.00 6.46
3338 4601 1.950909 CTCTATCTTTCTCTCCGGCGT 59.049 52.381 6.01 0.00 0.00 5.68
3339 4602 1.676529 TCTATCTTTCTCTCCGGCGTG 59.323 52.381 6.01 0.00 0.00 5.34
3340 4603 0.102481 TATCTTTCTCTCCGGCGTGC 59.898 55.000 6.01 0.00 0.00 5.34
3341 4604 1.888436 ATCTTTCTCTCCGGCGTGCA 61.888 55.000 6.01 0.00 0.00 4.57
3342 4605 2.357034 TTTCTCTCCGGCGTGCAC 60.357 61.111 6.82 6.82 0.00 4.57
3343 4606 4.717629 TTCTCTCCGGCGTGCACG 62.718 66.667 34.01 34.01 43.27 5.34
3345 4608 4.717629 CTCTCCGGCGTGCACGAA 62.718 66.667 41.19 21.29 43.02 3.85
3346 4609 4.717629 TCTCCGGCGTGCACGAAG 62.718 66.667 41.19 30.48 43.02 3.79
3347 4610 4.717629 CTCCGGCGTGCACGAAGA 62.718 66.667 41.19 29.22 43.02 2.87
3350 4613 4.059459 CGGCGTGCACGAAGACAC 62.059 66.667 41.19 22.24 43.02 3.67
3351 4614 3.712881 GGCGTGCACGAAGACACC 61.713 66.667 41.19 26.93 43.02 4.16
3352 4615 4.059459 GCGTGCACGAAGACACCG 62.059 66.667 41.19 13.45 43.02 4.94
3353 4616 2.354188 CGTGCACGAAGACACCGA 60.354 61.111 34.93 0.00 43.02 4.69
3354 4617 1.733041 CGTGCACGAAGACACCGAT 60.733 57.895 34.93 0.00 43.02 4.18
3355 4618 0.455464 CGTGCACGAAGACACCGATA 60.455 55.000 34.93 0.00 43.02 2.92
3356 4619 1.269166 GTGCACGAAGACACCGATAG 58.731 55.000 0.00 0.00 33.45 2.08
3357 4620 1.135489 GTGCACGAAGACACCGATAGA 60.135 52.381 0.00 0.00 39.76 1.98
3358 4621 1.132453 TGCACGAAGACACCGATAGAG 59.868 52.381 0.00 0.00 39.76 2.43
3359 4622 1.828832 CACGAAGACACCGATAGAGC 58.171 55.000 0.00 0.00 39.76 4.09
3360 4623 1.402259 CACGAAGACACCGATAGAGCT 59.598 52.381 0.00 0.00 39.76 4.09
3361 4624 1.671845 ACGAAGACACCGATAGAGCTC 59.328 52.381 5.27 5.27 39.76 4.09
3362 4625 1.002251 CGAAGACACCGATAGAGCTCC 60.002 57.143 10.93 0.00 39.76 4.70
3363 4626 1.002251 GAAGACACCGATAGAGCTCCG 60.002 57.143 10.93 7.01 39.76 4.63
3365 4628 2.336809 CACCGATAGAGCTCCGGC 59.663 66.667 24.36 8.25 46.54 6.13
3366 4629 3.288290 ACCGATAGAGCTCCGGCG 61.288 66.667 24.36 17.97 46.54 6.46
3367 4630 2.978565 CCGATAGAGCTCCGGCGA 60.979 66.667 15.52 0.00 44.37 5.54
3368 4631 2.252855 CGATAGAGCTCCGGCGAC 59.747 66.667 9.30 0.00 44.37 5.19
3369 4632 2.646143 GATAGAGCTCCGGCGACC 59.354 66.667 9.30 0.00 44.37 4.79
3370 4633 1.899534 GATAGAGCTCCGGCGACCT 60.900 63.158 9.30 0.10 44.37 3.85
3371 4634 2.136196 GATAGAGCTCCGGCGACCTG 62.136 65.000 9.30 0.00 44.37 4.00
3381 4644 3.573558 GCGACCTGCGGATTTTGA 58.426 55.556 0.00 0.00 41.29 2.69
3382 4645 2.098293 GCGACCTGCGGATTTTGAT 58.902 52.632 0.00 0.00 41.29 2.57
3383 4646 0.451783 GCGACCTGCGGATTTTGATT 59.548 50.000 0.00 0.00 41.29 2.57
3384 4647 1.135402 GCGACCTGCGGATTTTGATTT 60.135 47.619 0.00 0.00 41.29 2.17
3385 4648 2.671070 GCGACCTGCGGATTTTGATTTT 60.671 45.455 0.00 0.00 41.29 1.82
3386 4649 3.426963 GCGACCTGCGGATTTTGATTTTA 60.427 43.478 0.00 0.00 41.29 1.52
3387 4650 4.342772 CGACCTGCGGATTTTGATTTTAG 58.657 43.478 0.00 0.00 36.03 1.85
3388 4651 4.672409 GACCTGCGGATTTTGATTTTAGG 58.328 43.478 0.00 0.00 0.00 2.69
3389 4652 4.340617 ACCTGCGGATTTTGATTTTAGGA 58.659 39.130 0.00 0.00 0.00 2.94
3390 4653 4.399303 ACCTGCGGATTTTGATTTTAGGAG 59.601 41.667 0.00 0.00 0.00 3.69
3391 4654 4.354587 CTGCGGATTTTGATTTTAGGAGC 58.645 43.478 0.00 0.00 0.00 4.70
3392 4655 3.761218 TGCGGATTTTGATTTTAGGAGCA 59.239 39.130 0.00 0.00 0.00 4.26
3393 4656 4.402155 TGCGGATTTTGATTTTAGGAGCAT 59.598 37.500 0.00 0.00 0.00 3.79
3394 4657 5.105392 TGCGGATTTTGATTTTAGGAGCATT 60.105 36.000 0.00 0.00 0.00 3.56
3395 4658 5.812127 GCGGATTTTGATTTTAGGAGCATTT 59.188 36.000 0.00 0.00 0.00 2.32
3396 4659 6.237915 GCGGATTTTGATTTTAGGAGCATTTG 60.238 38.462 0.00 0.00 0.00 2.32
3397 4660 7.035004 CGGATTTTGATTTTAGGAGCATTTGA 58.965 34.615 0.00 0.00 0.00 2.69
3398 4661 7.545265 CGGATTTTGATTTTAGGAGCATTTGAA 59.455 33.333 0.00 0.00 0.00 2.69
3399 4662 9.387257 GGATTTTGATTTTAGGAGCATTTGAAT 57.613 29.630 0.00 0.00 0.00 2.57
3425 4688 7.835634 TTTTTGACCCAAACATCACTTTTAC 57.164 32.000 0.00 0.00 32.79 2.01
3426 4689 6.783708 TTTGACCCAAACATCACTTTTACT 57.216 33.333 0.00 0.00 0.00 2.24
3427 4690 6.385649 TTGACCCAAACATCACTTTTACTC 57.614 37.500 0.00 0.00 0.00 2.59
3428 4691 5.690865 TGACCCAAACATCACTTTTACTCT 58.309 37.500 0.00 0.00 0.00 3.24
3429 4692 6.126409 TGACCCAAACATCACTTTTACTCTT 58.874 36.000 0.00 0.00 0.00 2.85
3430 4693 6.605594 TGACCCAAACATCACTTTTACTCTTT 59.394 34.615 0.00 0.00 0.00 2.52
3431 4694 7.776030 TGACCCAAACATCACTTTTACTCTTTA 59.224 33.333 0.00 0.00 0.00 1.85
3432 4695 8.528044 ACCCAAACATCACTTTTACTCTTTAA 57.472 30.769 0.00 0.00 0.00 1.52
3433 4696 8.973182 ACCCAAACATCACTTTTACTCTTTAAA 58.027 29.630 0.00 0.00 0.00 1.52
3434 4697 9.981114 CCCAAACATCACTTTTACTCTTTAAAT 57.019 29.630 0.00 0.00 0.00 1.40
3452 4715 9.862149 TCTTTAAATTTGAGTTTTAGGAGACCT 57.138 29.630 0.00 0.00 37.71 3.85
3453 4716 9.899226 CTTTAAATTTGAGTTTTAGGAGACCTG 57.101 33.333 0.00 0.00 34.61 4.00
3454 4717 5.966742 AATTTGAGTTTTAGGAGACCTGC 57.033 39.130 0.00 0.00 34.61 4.85
3455 4718 4.706842 TTTGAGTTTTAGGAGACCTGCT 57.293 40.909 0.00 0.00 34.61 4.24
3456 4719 5.818678 TTTGAGTTTTAGGAGACCTGCTA 57.181 39.130 0.00 0.00 34.61 3.49
3457 4720 5.407407 TTGAGTTTTAGGAGACCTGCTAG 57.593 43.478 0.00 0.00 34.98 3.42
3458 4721 4.673968 TGAGTTTTAGGAGACCTGCTAGA 58.326 43.478 0.00 0.00 34.98 2.43
3459 4722 4.707448 TGAGTTTTAGGAGACCTGCTAGAG 59.293 45.833 0.00 0.00 34.98 2.43
3460 4723 4.936802 AGTTTTAGGAGACCTGCTAGAGA 58.063 43.478 0.00 0.00 34.98 3.10
3461 4724 5.524535 AGTTTTAGGAGACCTGCTAGAGAT 58.475 41.667 0.00 0.00 34.98 2.75
3462 4725 5.362430 AGTTTTAGGAGACCTGCTAGAGATG 59.638 44.000 0.00 0.00 34.98 2.90
3463 4726 2.380064 AGGAGACCTGCTAGAGATGG 57.620 55.000 0.00 0.00 29.57 3.51
3464 4727 1.573376 AGGAGACCTGCTAGAGATGGT 59.427 52.381 0.00 0.00 35.23 3.55
3465 4728 1.960689 GGAGACCTGCTAGAGATGGTC 59.039 57.143 12.80 12.80 46.67 4.02
3468 4731 2.660572 GACCTGCTAGAGATGGTCTGA 58.339 52.381 13.19 0.00 43.91 3.27
3469 4732 2.622942 GACCTGCTAGAGATGGTCTGAG 59.377 54.545 13.19 0.00 43.91 3.35
3470 4733 2.243478 ACCTGCTAGAGATGGTCTGAGA 59.757 50.000 0.00 0.00 36.64 3.27
3471 4734 2.886523 CCTGCTAGAGATGGTCTGAGAG 59.113 54.545 0.00 0.00 36.64 3.20
3472 4735 3.434882 CCTGCTAGAGATGGTCTGAGAGA 60.435 52.174 0.00 0.00 36.64 3.10
3473 4736 3.817084 CTGCTAGAGATGGTCTGAGAGAG 59.183 52.174 0.00 0.00 36.64 3.20
3474 4737 2.554032 GCTAGAGATGGTCTGAGAGAGC 59.446 54.545 0.00 0.00 42.72 4.09
3486 4749 7.418840 GGTCTGAGAGAGCAAACATAATATG 57.581 40.000 0.00 0.00 42.03 1.78
3487 4750 6.989169 GGTCTGAGAGAGCAAACATAATATGT 59.011 38.462 0.00 0.00 42.85 2.29
3488 4751 7.042187 GGTCTGAGAGAGCAAACATAATATGTG 60.042 40.741 6.67 0.00 41.48 3.21
3489 4752 7.493971 GTCTGAGAGAGCAAACATAATATGTGT 59.506 37.037 6.67 0.00 44.07 3.72
3490 4753 7.708322 TCTGAGAGAGCAAACATAATATGTGTC 59.292 37.037 6.67 2.59 44.07 3.67
3491 4754 6.763135 TGAGAGAGCAAACATAATATGTGTCC 59.237 38.462 6.67 0.00 44.07 4.02
3492 4755 6.058183 AGAGAGCAAACATAATATGTGTCCC 58.942 40.000 6.67 0.00 44.07 4.46
3493 4756 6.006275 AGAGCAAACATAATATGTGTCCCT 57.994 37.500 6.67 0.27 44.07 4.20
3494 4757 5.824624 AGAGCAAACATAATATGTGTCCCTG 59.175 40.000 6.67 1.92 44.07 4.45
3495 4758 5.754782 AGCAAACATAATATGTGTCCCTGA 58.245 37.500 6.67 0.00 44.07 3.86
3496 4759 5.824624 AGCAAACATAATATGTGTCCCTGAG 59.175 40.000 6.67 0.00 44.07 3.35
3497 4760 5.822519 GCAAACATAATATGTGTCCCTGAGA 59.177 40.000 6.67 0.00 44.07 3.27
3498 4761 6.318648 GCAAACATAATATGTGTCCCTGAGAA 59.681 38.462 6.67 0.00 44.07 2.87
3499 4762 7.679638 GCAAACATAATATGTGTCCCTGAGAAC 60.680 40.741 6.67 0.00 44.07 3.01
3500 4763 6.560003 ACATAATATGTGTCCCTGAGAACA 57.440 37.500 4.93 0.00 43.01 3.18
3501 4764 7.141758 ACATAATATGTGTCCCTGAGAACAT 57.858 36.000 4.93 0.00 43.01 2.71
3502 4765 7.577303 ACATAATATGTGTCCCTGAGAACATT 58.423 34.615 4.93 0.00 43.01 2.71
3503 4766 7.716998 ACATAATATGTGTCCCTGAGAACATTC 59.283 37.037 4.93 0.00 43.01 2.67
3504 4767 2.859165 TGTGTCCCTGAGAACATTCC 57.141 50.000 0.00 0.00 0.00 3.01
3505 4768 1.001974 TGTGTCCCTGAGAACATTCCG 59.998 52.381 0.00 0.00 0.00 4.30
3506 4769 1.275291 GTGTCCCTGAGAACATTCCGA 59.725 52.381 0.00 0.00 0.00 4.55
3507 4770 1.550524 TGTCCCTGAGAACATTCCGAG 59.449 52.381 0.00 0.00 0.00 4.63
3508 4771 1.825474 GTCCCTGAGAACATTCCGAGA 59.175 52.381 0.00 0.00 0.00 4.04
3509 4772 2.103373 TCCCTGAGAACATTCCGAGAG 58.897 52.381 0.00 0.00 0.00 3.20
3510 4773 2.103373 CCCTGAGAACATTCCGAGAGA 58.897 52.381 0.00 0.00 0.00 3.10
3511 4774 2.100584 CCCTGAGAACATTCCGAGAGAG 59.899 54.545 0.00 0.00 0.00 3.20
3512 4775 2.481104 CCTGAGAACATTCCGAGAGAGC 60.481 54.545 0.00 0.00 0.00 4.09
3513 4776 2.165234 CTGAGAACATTCCGAGAGAGCA 59.835 50.000 0.00 0.00 0.00 4.26
3514 4777 2.562738 TGAGAACATTCCGAGAGAGCAA 59.437 45.455 0.00 0.00 0.00 3.91
3515 4778 3.006859 TGAGAACATTCCGAGAGAGCAAA 59.993 43.478 0.00 0.00 0.00 3.68
3516 4779 3.330267 AGAACATTCCGAGAGAGCAAAC 58.670 45.455 0.00 0.00 0.00 2.93
3517 4780 2.839486 ACATTCCGAGAGAGCAAACA 57.161 45.000 0.00 0.00 0.00 2.83
3518 4781 3.340814 ACATTCCGAGAGAGCAAACAT 57.659 42.857 0.00 0.00 0.00 2.71
3519 4782 4.471904 ACATTCCGAGAGAGCAAACATA 57.528 40.909 0.00 0.00 0.00 2.29
3520 4783 4.832248 ACATTCCGAGAGAGCAAACATAA 58.168 39.130 0.00 0.00 0.00 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.676986 GCATCTCACGTGTGGTACTTATCA 60.677 45.833 16.51 0.00 0.00 2.15
1 2 3.797256 GCATCTCACGTGTGGTACTTATC 59.203 47.826 16.51 0.00 0.00 1.75
4 5 1.343142 TGCATCTCACGTGTGGTACTT 59.657 47.619 16.51 0.00 0.00 2.24
5 6 0.966179 TGCATCTCACGTGTGGTACT 59.034 50.000 16.51 0.00 0.00 2.73
6 7 1.660607 CATGCATCTCACGTGTGGTAC 59.339 52.381 16.51 4.67 0.00 3.34
7 8 2.006552 GCATGCATCTCACGTGTGGTA 61.007 52.381 16.51 1.30 0.00 3.25
8 9 1.300971 GCATGCATCTCACGTGTGGT 61.301 55.000 16.51 6.49 0.00 4.16
9 10 1.300266 TGCATGCATCTCACGTGTGG 61.300 55.000 18.46 10.01 0.00 4.17
10 11 0.179207 GTGCATGCATCTCACGTGTG 60.179 55.000 25.64 13.78 0.00 3.82
11 12 0.603439 TGTGCATGCATCTCACGTGT 60.603 50.000 25.64 0.00 33.69 4.49
12 13 0.730840 ATGTGCATGCATCTCACGTG 59.269 50.000 25.64 9.94 33.69 4.49
13 14 0.730840 CATGTGCATGCATCTCACGT 59.269 50.000 25.64 8.99 33.69 4.49
14 15 0.028902 CCATGTGCATGCATCTCACG 59.971 55.000 25.64 9.83 37.49 4.35
15 16 0.248907 GCCATGTGCATGCATCTCAC 60.249 55.000 25.64 17.38 40.77 3.51
16 17 2.112029 GCCATGTGCATGCATCTCA 58.888 52.632 25.64 17.76 40.77 3.27
26 27 1.068333 ACATTCGAAGTTGCCATGTGC 60.068 47.619 3.35 0.00 41.77 4.57
27 28 2.995466 ACATTCGAAGTTGCCATGTG 57.005 45.000 3.35 0.00 0.00 3.21
28 29 4.298332 GAAAACATTCGAAGTTGCCATGT 58.702 39.130 3.35 0.00 0.00 3.21
29 30 3.361644 CGAAAACATTCGAAGTTGCCATG 59.638 43.478 3.35 0.00 46.52 3.66
30 31 3.564511 CGAAAACATTCGAAGTTGCCAT 58.435 40.909 3.35 0.00 46.52 4.40
31 32 2.993545 CGAAAACATTCGAAGTTGCCA 58.006 42.857 3.35 0.00 46.52 4.92
40 41 3.201726 ACTTGCCATCGAAAACATTCG 57.798 42.857 4.68 4.68 45.09 3.34
41 42 6.149633 ACTAAACTTGCCATCGAAAACATTC 58.850 36.000 0.00 0.00 0.00 2.67
42 43 6.084326 ACTAAACTTGCCATCGAAAACATT 57.916 33.333 0.00 0.00 0.00 2.71
43 44 5.705609 ACTAAACTTGCCATCGAAAACAT 57.294 34.783 0.00 0.00 0.00 2.71
44 45 5.508200 AACTAAACTTGCCATCGAAAACA 57.492 34.783 0.00 0.00 0.00 2.83
45 46 6.358822 GTGTAACTAAACTTGCCATCGAAAAC 59.641 38.462 0.00 0.00 0.00 2.43
46 47 6.038382 TGTGTAACTAAACTTGCCATCGAAAA 59.962 34.615 0.00 0.00 38.04 2.29
47 48 5.527951 TGTGTAACTAAACTTGCCATCGAAA 59.472 36.000 0.00 0.00 38.04 3.46
48 49 5.057819 TGTGTAACTAAACTTGCCATCGAA 58.942 37.500 0.00 0.00 38.04 3.71
49 50 4.633175 TGTGTAACTAAACTTGCCATCGA 58.367 39.130 0.00 0.00 38.04 3.59
50 51 5.178623 TCTTGTGTAACTAAACTTGCCATCG 59.821 40.000 0.00 0.00 38.04 3.84
51 52 6.554334 TCTTGTGTAACTAAACTTGCCATC 57.446 37.500 0.00 0.00 38.04 3.51
52 53 6.952773 TTCTTGTGTAACTAAACTTGCCAT 57.047 33.333 0.00 0.00 38.04 4.40
53 54 6.952773 ATTCTTGTGTAACTAAACTTGCCA 57.047 33.333 0.00 0.00 38.04 4.92
54 55 7.968405 CCATATTCTTGTGTAACTAAACTTGCC 59.032 37.037 0.00 0.00 38.04 4.52
55 56 8.726988 TCCATATTCTTGTGTAACTAAACTTGC 58.273 33.333 0.00 0.00 38.04 4.01
71 72 9.860898 GCTTGTCAACTTATTTTCCATATTCTT 57.139 29.630 0.00 0.00 0.00 2.52
72 73 9.023962 TGCTTGTCAACTTATTTTCCATATTCT 57.976 29.630 0.00 0.00 0.00 2.40
73 74 9.807649 ATGCTTGTCAACTTATTTTCCATATTC 57.192 29.630 0.00 0.00 0.00 1.75
74 75 9.590451 CATGCTTGTCAACTTATTTTCCATATT 57.410 29.630 0.00 0.00 0.00 1.28
75 76 8.970020 TCATGCTTGTCAACTTATTTTCCATAT 58.030 29.630 0.00 0.00 0.00 1.78
76 77 8.243426 GTCATGCTTGTCAACTTATTTTCCATA 58.757 33.333 0.00 0.00 0.00 2.74
77 78 7.092716 GTCATGCTTGTCAACTTATTTTCCAT 58.907 34.615 0.00 0.00 0.00 3.41
78 79 6.040278 TGTCATGCTTGTCAACTTATTTTCCA 59.960 34.615 0.00 0.00 0.00 3.53
79 80 6.446318 TGTCATGCTTGTCAACTTATTTTCC 58.554 36.000 0.00 0.00 0.00 3.13
80 81 7.777425 GTTGTCATGCTTGTCAACTTATTTTC 58.223 34.615 24.93 6.27 43.84 2.29
81 82 7.698836 GTTGTCATGCTTGTCAACTTATTTT 57.301 32.000 24.93 0.00 43.84 1.82
88 89 3.725740 CGAAAGTTGTCATGCTTGTCAAC 59.274 43.478 24.87 24.87 45.99 3.18
89 90 3.791789 GCGAAAGTTGTCATGCTTGTCAA 60.792 43.478 7.92 7.92 0.00 3.18
90 91 2.286950 GCGAAAGTTGTCATGCTTGTCA 60.287 45.455 0.00 0.00 0.00 3.58
91 92 2.310577 GCGAAAGTTGTCATGCTTGTC 58.689 47.619 0.00 0.00 0.00 3.18
92 93 1.334059 CGCGAAAGTTGTCATGCTTGT 60.334 47.619 0.00 0.00 0.00 3.16
93 94 1.321016 CGCGAAAGTTGTCATGCTTG 58.679 50.000 0.00 0.00 0.00 4.01
94 95 0.385974 GCGCGAAAGTTGTCATGCTT 60.386 50.000 12.10 0.00 0.00 3.91
95 96 1.207593 GCGCGAAAGTTGTCATGCT 59.792 52.632 12.10 0.00 0.00 3.79
96 97 0.385974 AAGCGCGAAAGTTGTCATGC 60.386 50.000 12.10 0.00 0.00 4.06
97 98 1.595609 GAAGCGCGAAAGTTGTCATG 58.404 50.000 12.10 0.00 0.00 3.07
98 99 0.163788 CGAAGCGCGAAAGTTGTCAT 59.836 50.000 12.10 0.00 44.57 3.06
99 100 1.562691 CGAAGCGCGAAAGTTGTCA 59.437 52.632 12.10 0.00 44.57 3.58
100 101 1.154654 CCGAAGCGCGAAAGTTGTC 60.155 57.895 12.10 0.00 44.57 3.18
101 102 1.433837 AACCGAAGCGCGAAAGTTGT 61.434 50.000 12.10 0.00 44.57 3.32
102 103 0.316689 AAACCGAAGCGCGAAAGTTG 60.317 50.000 12.10 0.00 44.57 3.16
103 104 1.219646 TAAACCGAAGCGCGAAAGTT 58.780 45.000 12.10 2.04 44.57 2.66
104 105 1.435577 ATAAACCGAAGCGCGAAAGT 58.564 45.000 12.10 0.00 44.57 2.66
105 106 2.520686 AATAAACCGAAGCGCGAAAG 57.479 45.000 12.10 0.00 44.57 2.62
106 107 2.973419 AAATAAACCGAAGCGCGAAA 57.027 40.000 12.10 0.00 44.57 3.46
107 108 2.973419 AAAATAAACCGAAGCGCGAA 57.027 40.000 12.10 0.00 44.57 4.70
108 109 2.223611 TCAAAAATAAACCGAAGCGCGA 59.776 40.909 12.10 0.00 44.57 5.87
109 110 2.576406 TCAAAAATAAACCGAAGCGCG 58.424 42.857 0.00 0.00 40.47 6.86
110 111 6.620253 TTTATCAAAAATAAACCGAAGCGC 57.380 33.333 0.00 0.00 0.00 5.92
111 112 8.696175 AGTTTTTATCAAAAATAAACCGAAGCG 58.304 29.630 0.61 0.00 41.85 4.68
115 116 8.766151 GGCAAGTTTTTATCAAAAATAAACCGA 58.234 29.630 0.61 0.00 41.85 4.69
116 117 7.738176 CGGCAAGTTTTTATCAAAAATAAACCG 59.262 33.333 12.66 12.66 41.85 4.44
117 118 8.552865 ACGGCAAGTTTTTATCAAAAATAAACC 58.447 29.630 0.61 1.43 41.85 3.27
118 119 9.364110 CACGGCAAGTTTTTATCAAAAATAAAC 57.636 29.630 0.61 0.00 41.85 2.01
119 120 9.099454 ACACGGCAAGTTTTTATCAAAAATAAA 57.901 25.926 0.61 0.00 41.85 1.40
120 121 8.543774 CACACGGCAAGTTTTTATCAAAAATAA 58.456 29.630 0.61 0.00 41.85 1.40
121 122 7.707035 ACACACGGCAAGTTTTTATCAAAAATA 59.293 29.630 0.61 0.00 41.85 1.40
122 123 6.536941 ACACACGGCAAGTTTTTATCAAAAAT 59.463 30.769 0.61 0.00 41.85 1.82
123 124 5.869888 ACACACGGCAAGTTTTTATCAAAAA 59.130 32.000 0.00 0.00 37.99 1.94
124 125 5.411781 ACACACGGCAAGTTTTTATCAAAA 58.588 33.333 0.00 0.00 0.00 2.44
125 126 5.000012 ACACACGGCAAGTTTTTATCAAA 58.000 34.783 0.00 0.00 0.00 2.69
126 127 4.602995 GACACACGGCAAGTTTTTATCAA 58.397 39.130 0.00 0.00 0.00 2.57
127 128 3.303461 CGACACACGGCAAGTTTTTATCA 60.303 43.478 0.00 0.00 38.46 2.15
128 129 3.223157 CGACACACGGCAAGTTTTTATC 58.777 45.455 0.00 0.00 38.46 1.75
129 130 2.603652 GCGACACACGGCAAGTTTTTAT 60.604 45.455 0.00 0.00 42.83 1.40
130 131 1.268133 GCGACACACGGCAAGTTTTTA 60.268 47.619 0.00 0.00 42.83 1.52
131 132 0.524604 GCGACACACGGCAAGTTTTT 60.525 50.000 0.00 0.00 42.83 1.94
132 133 1.063488 GCGACACACGGCAAGTTTT 59.937 52.632 0.00 0.00 42.83 2.43
133 134 1.817941 AGCGACACACGGCAAGTTT 60.818 52.632 0.00 0.00 42.83 2.66
134 135 2.203015 AGCGACACACGGCAAGTT 60.203 55.556 0.00 0.00 42.83 2.66
135 136 2.967076 CAGCGACACACGGCAAGT 60.967 61.111 0.00 0.00 42.83 3.16
136 137 4.374702 GCAGCGACACACGGCAAG 62.375 66.667 0.00 0.00 42.83 4.01
139 140 2.731587 AAATTGCAGCGACACACGGC 62.732 55.000 0.00 0.00 42.83 5.68
140 141 0.998226 CAAATTGCAGCGACACACGG 60.998 55.000 0.00 0.00 42.83 4.94
141 142 0.316937 ACAAATTGCAGCGACACACG 60.317 50.000 0.00 0.00 45.66 4.49
142 143 1.268488 TGACAAATTGCAGCGACACAC 60.268 47.619 0.00 0.00 0.00 3.82
143 144 1.020437 TGACAAATTGCAGCGACACA 58.980 45.000 0.00 0.00 0.00 3.72
144 145 2.245096 GATGACAAATTGCAGCGACAC 58.755 47.619 0.00 0.00 0.00 3.67
145 146 1.199789 GGATGACAAATTGCAGCGACA 59.800 47.619 0.00 0.00 0.00 4.35
146 147 1.470098 AGGATGACAAATTGCAGCGAC 59.530 47.619 0.00 0.00 0.00 5.19
147 148 1.825090 AGGATGACAAATTGCAGCGA 58.175 45.000 0.00 0.00 0.00 4.93
148 149 2.256174 CAAGGATGACAAATTGCAGCG 58.744 47.619 0.00 0.00 0.00 5.18
149 150 1.997606 GCAAGGATGACAAATTGCAGC 59.002 47.619 14.33 0.00 45.66 5.25
152 153 3.852286 TCATGCAAGGATGACAAATTGC 58.148 40.909 12.99 12.99 46.36 3.56
160 161 4.768448 ACAATTTCAGTCATGCAAGGATGA 59.232 37.500 0.00 0.00 0.00 2.92
161 162 5.068234 ACAATTTCAGTCATGCAAGGATG 57.932 39.130 0.00 0.00 0.00 3.51
162 163 4.768448 TGACAATTTCAGTCATGCAAGGAT 59.232 37.500 0.00 0.00 40.80 3.24
163 164 4.143543 TGACAATTTCAGTCATGCAAGGA 58.856 39.130 0.00 0.00 40.80 3.36
164 165 4.508461 TGACAATTTCAGTCATGCAAGG 57.492 40.909 0.00 0.00 40.80 3.61
171 172 6.457663 ACGTTTTTCGATGACAATTTCAGTCA 60.458 34.615 0.00 0.00 44.90 3.41
172 173 5.907391 ACGTTTTTCGATGACAATTTCAGTC 59.093 36.000 0.00 0.00 42.86 3.51
173 174 5.816919 ACGTTTTTCGATGACAATTTCAGT 58.183 33.333 0.00 0.00 42.86 3.41
174 175 6.732181 AACGTTTTTCGATGACAATTTCAG 57.268 33.333 0.00 0.00 42.86 3.02
175 176 7.377397 CCTTAACGTTTTTCGATGACAATTTCA 59.623 33.333 5.91 0.00 42.86 2.69
176 177 7.616514 GCCTTAACGTTTTTCGATGACAATTTC 60.617 37.037 5.91 0.00 42.86 2.17
177 178 6.143278 GCCTTAACGTTTTTCGATGACAATTT 59.857 34.615 5.91 0.00 42.86 1.82
178 179 5.627780 GCCTTAACGTTTTTCGATGACAATT 59.372 36.000 5.91 0.00 42.86 2.32
179 180 5.151389 GCCTTAACGTTTTTCGATGACAAT 58.849 37.500 5.91 0.00 42.86 2.71
180 181 4.529446 GCCTTAACGTTTTTCGATGACAA 58.471 39.130 5.91 0.00 42.86 3.18
181 182 3.058777 GGCCTTAACGTTTTTCGATGACA 60.059 43.478 5.91 0.00 42.86 3.58
182 183 3.058777 TGGCCTTAACGTTTTTCGATGAC 60.059 43.478 5.91 0.00 42.86 3.06
183 184 3.139850 TGGCCTTAACGTTTTTCGATGA 58.860 40.909 5.91 0.00 42.86 2.92
184 185 3.187637 TCTGGCCTTAACGTTTTTCGATG 59.812 43.478 5.91 0.00 42.86 3.84
185 186 3.404899 TCTGGCCTTAACGTTTTTCGAT 58.595 40.909 5.91 0.00 42.86 3.59
186 187 2.803956 CTCTGGCCTTAACGTTTTTCGA 59.196 45.455 5.91 0.00 42.86 3.71
187 188 2.546789 ACTCTGGCCTTAACGTTTTTCG 59.453 45.455 5.91 0.00 46.00 3.46
188 189 3.852205 GCACTCTGGCCTTAACGTTTTTC 60.852 47.826 5.91 0.00 0.00 2.29
189 190 2.034179 GCACTCTGGCCTTAACGTTTTT 59.966 45.455 5.91 0.00 0.00 1.94
190 191 1.607148 GCACTCTGGCCTTAACGTTTT 59.393 47.619 5.91 0.00 0.00 2.43
191 192 1.235724 GCACTCTGGCCTTAACGTTT 58.764 50.000 5.91 0.00 0.00 3.60
192 193 2.928416 GCACTCTGGCCTTAACGTT 58.072 52.632 5.88 5.88 0.00 3.99
193 194 4.695560 GCACTCTGGCCTTAACGT 57.304 55.556 3.32 0.00 0.00 3.99
216 217 3.746045 AATAAGTGTCACACGTCAGGT 57.254 42.857 0.00 0.00 39.64 4.00
217 218 6.367695 TCAAATAATAAGTGTCACACGTCAGG 59.632 38.462 0.00 0.00 39.64 3.86
218 219 7.346208 TCAAATAATAAGTGTCACACGTCAG 57.654 36.000 0.00 0.00 39.64 3.51
219 220 7.716768 TTCAAATAATAAGTGTCACACGTCA 57.283 32.000 0.00 0.00 39.64 4.35
278 279 9.275398 ACCACTTATACAAAGAAAAACGATACA 57.725 29.630 0.00 0.00 0.00 2.29
279 280 9.750882 GACCACTTATACAAAGAAAAACGATAC 57.249 33.333 0.00 0.00 0.00 2.24
280 281 9.491675 TGACCACTTATACAAAGAAAAACGATA 57.508 29.630 0.00 0.00 0.00 2.92
281 282 8.385898 TGACCACTTATACAAAGAAAAACGAT 57.614 30.769 0.00 0.00 0.00 3.73
282 283 7.789273 TGACCACTTATACAAAGAAAAACGA 57.211 32.000 0.00 0.00 0.00 3.85
283 284 7.377662 GGTTGACCACTTATACAAAGAAAAACG 59.622 37.037 0.00 0.00 35.64 3.60
284 285 8.410912 AGGTTGACCACTTATACAAAGAAAAAC 58.589 33.333 2.56 0.00 38.89 2.43
285 286 8.528044 AGGTTGACCACTTATACAAAGAAAAA 57.472 30.769 2.56 0.00 38.89 1.94
286 287 9.280174 CTAGGTTGACCACTTATACAAAGAAAA 57.720 33.333 2.56 0.00 38.89 2.29
287 288 8.434392 ACTAGGTTGACCACTTATACAAAGAAA 58.566 33.333 2.56 0.00 38.89 2.52
288 289 7.970102 ACTAGGTTGACCACTTATACAAAGAA 58.030 34.615 2.56 0.00 38.89 2.52
289 290 7.549147 ACTAGGTTGACCACTTATACAAAGA 57.451 36.000 2.56 0.00 38.89 2.52
290 291 8.308931 TGTACTAGGTTGACCACTTATACAAAG 58.691 37.037 2.56 0.00 38.89 2.77
291 292 8.192743 TGTACTAGGTTGACCACTTATACAAA 57.807 34.615 2.56 0.00 38.89 2.83
292 293 7.779754 TGTACTAGGTTGACCACTTATACAA 57.220 36.000 2.56 0.00 38.89 2.41
293 294 7.233144 TGTTGTACTAGGTTGACCACTTATACA 59.767 37.037 2.56 1.75 38.89 2.29
294 295 7.605449 TGTTGTACTAGGTTGACCACTTATAC 58.395 38.462 2.56 0.00 38.89 1.47
295 296 7.779754 TGTTGTACTAGGTTGACCACTTATA 57.220 36.000 2.56 0.00 38.89 0.98
296 297 6.675413 TGTTGTACTAGGTTGACCACTTAT 57.325 37.500 2.56 0.00 38.89 1.73
297 298 6.482898 TTGTTGTACTAGGTTGACCACTTA 57.517 37.500 2.56 0.00 38.89 2.24
298 299 5.362105 TTGTTGTACTAGGTTGACCACTT 57.638 39.130 2.56 0.00 38.89 3.16
299 300 5.129815 TCTTTGTTGTACTAGGTTGACCACT 59.870 40.000 2.56 0.00 38.89 4.00
300 301 5.235831 GTCTTTGTTGTACTAGGTTGACCAC 59.764 44.000 2.56 0.00 38.89 4.16
301 302 5.129815 AGTCTTTGTTGTACTAGGTTGACCA 59.870 40.000 2.56 0.00 38.89 4.02
302 303 5.608449 AGTCTTTGTTGTACTAGGTTGACC 58.392 41.667 0.00 0.00 0.00 4.02
303 304 8.828688 AATAGTCTTTGTTGTACTAGGTTGAC 57.171 34.615 0.00 0.00 0.00 3.18
304 305 8.867097 AGAATAGTCTTTGTTGTACTAGGTTGA 58.133 33.333 0.00 0.00 0.00 3.18
305 306 9.490379 AAGAATAGTCTTTGTTGTACTAGGTTG 57.510 33.333 0.00 0.00 41.55 3.77
326 327 9.225436 GAGGTGAAAGAGAGAAAACATAAGAAT 57.775 33.333 0.00 0.00 0.00 2.40
327 328 8.210946 TGAGGTGAAAGAGAGAAAACATAAGAA 58.789 33.333 0.00 0.00 0.00 2.52
328 329 7.735917 TGAGGTGAAAGAGAGAAAACATAAGA 58.264 34.615 0.00 0.00 0.00 2.10
329 330 7.360776 GCTGAGGTGAAAGAGAGAAAACATAAG 60.361 40.741 0.00 0.00 0.00 1.73
330 331 6.428159 GCTGAGGTGAAAGAGAGAAAACATAA 59.572 38.462 0.00 0.00 0.00 1.90
331 332 5.934625 GCTGAGGTGAAAGAGAGAAAACATA 59.065 40.000 0.00 0.00 0.00 2.29
332 333 4.759183 GCTGAGGTGAAAGAGAGAAAACAT 59.241 41.667 0.00 0.00 0.00 2.71
333 334 4.130118 GCTGAGGTGAAAGAGAGAAAACA 58.870 43.478 0.00 0.00 0.00 2.83
334 335 4.130118 TGCTGAGGTGAAAGAGAGAAAAC 58.870 43.478 0.00 0.00 0.00 2.43
335 336 4.422073 TGCTGAGGTGAAAGAGAGAAAA 57.578 40.909 0.00 0.00 0.00 2.29
336 337 4.422073 TTGCTGAGGTGAAAGAGAGAAA 57.578 40.909 0.00 0.00 0.00 2.52
337 338 4.285517 AGATTGCTGAGGTGAAAGAGAGAA 59.714 41.667 0.00 0.00 0.00 2.87
338 339 3.837146 AGATTGCTGAGGTGAAAGAGAGA 59.163 43.478 0.00 0.00 0.00 3.10
339 340 4.205065 AGATTGCTGAGGTGAAAGAGAG 57.795 45.455 0.00 0.00 0.00 3.20
340 341 5.188555 ACATAGATTGCTGAGGTGAAAGAGA 59.811 40.000 0.00 0.00 0.00 3.10
341 342 5.426504 ACATAGATTGCTGAGGTGAAAGAG 58.573 41.667 0.00 0.00 0.00 2.85
342 343 5.188555 AGACATAGATTGCTGAGGTGAAAGA 59.811 40.000 0.00 0.00 0.00 2.52
343 344 5.293814 CAGACATAGATTGCTGAGGTGAAAG 59.706 44.000 0.00 0.00 33.78 2.62
344 345 5.181009 CAGACATAGATTGCTGAGGTGAAA 58.819 41.667 0.00 0.00 33.78 2.69
345 346 4.223700 ACAGACATAGATTGCTGAGGTGAA 59.776 41.667 0.00 0.00 35.08 3.18
346 347 3.771479 ACAGACATAGATTGCTGAGGTGA 59.229 43.478 0.00 0.00 35.08 4.02
347 348 3.869832 CACAGACATAGATTGCTGAGGTG 59.130 47.826 0.00 0.00 35.08 4.00
348 349 3.681034 GCACAGACATAGATTGCTGAGGT 60.681 47.826 0.00 0.00 35.08 3.85
349 350 2.871022 GCACAGACATAGATTGCTGAGG 59.129 50.000 0.00 0.00 35.08 3.86
350 351 2.871022 GGCACAGACATAGATTGCTGAG 59.129 50.000 0.00 0.00 35.08 3.35
351 352 2.236893 TGGCACAGACATAGATTGCTGA 59.763 45.455 0.00 0.00 35.08 4.26
352 353 2.635714 TGGCACAGACATAGATTGCTG 58.364 47.619 0.00 0.00 36.30 4.41
353 354 3.276857 CTTGGCACAGACATAGATTGCT 58.723 45.455 0.00 0.00 42.39 3.91
354 355 3.012518 ACTTGGCACAGACATAGATTGC 58.987 45.455 0.00 0.00 42.39 3.56
355 356 6.595326 TCTTAACTTGGCACAGACATAGATTG 59.405 38.462 0.00 0.00 42.39 2.67
356 357 6.711277 TCTTAACTTGGCACAGACATAGATT 58.289 36.000 0.00 0.00 42.39 2.40
357 358 6.299805 TCTTAACTTGGCACAGACATAGAT 57.700 37.500 0.00 0.00 42.39 1.98
358 359 5.738619 TCTTAACTTGGCACAGACATAGA 57.261 39.130 0.00 0.00 42.39 1.98
359 360 6.128172 CCTTTCTTAACTTGGCACAGACATAG 60.128 42.308 0.00 0.00 42.39 2.23
360 361 5.705441 CCTTTCTTAACTTGGCACAGACATA 59.295 40.000 0.00 0.00 42.39 2.29
361 362 4.520492 CCTTTCTTAACTTGGCACAGACAT 59.480 41.667 0.00 0.00 42.39 3.06
362 363 3.882888 CCTTTCTTAACTTGGCACAGACA 59.117 43.478 0.00 0.00 42.39 3.41
363 364 4.134563 TCCTTTCTTAACTTGGCACAGAC 58.865 43.478 0.00 0.00 42.39 3.51
364 365 4.102524 TCTCCTTTCTTAACTTGGCACAGA 59.897 41.667 0.00 0.00 42.39 3.41
365 366 4.389374 TCTCCTTTCTTAACTTGGCACAG 58.611 43.478 0.00 0.00 42.39 3.66
366 367 4.431416 TCTCCTTTCTTAACTTGGCACA 57.569 40.909 0.00 0.00 0.00 4.57
371 372 9.455847 CTGACAAAATTCTCCTTTCTTAACTTG 57.544 33.333 0.00 0.00 0.00 3.16
405 406 1.104577 TTCCGACAGTGGGCCAAAAC 61.105 55.000 8.40 0.00 0.00 2.43
406 407 0.178975 ATTCCGACAGTGGGCCAAAA 60.179 50.000 8.40 0.00 0.00 2.44
409 410 0.693622 TTTATTCCGACAGTGGGCCA 59.306 50.000 0.00 0.00 0.00 5.36
410 411 1.471287 GTTTTATTCCGACAGTGGGCC 59.529 52.381 0.00 0.00 0.00 5.80
412 413 4.814771 GGATAGTTTTATTCCGACAGTGGG 59.185 45.833 0.00 0.00 0.00 4.61
413 414 4.506654 CGGATAGTTTTATTCCGACAGTGG 59.493 45.833 4.65 0.00 45.77 4.00
414 415 5.005394 CACGGATAGTTTTATTCCGACAGTG 59.995 44.000 16.62 1.67 45.77 3.66
415 416 5.107133 CACGGATAGTTTTATTCCGACAGT 58.893 41.667 16.62 0.00 45.77 3.55
416 417 4.025979 GCACGGATAGTTTTATTCCGACAG 60.026 45.833 16.62 7.58 45.77 3.51
417 418 3.866910 GCACGGATAGTTTTATTCCGACA 59.133 43.478 16.62 0.00 45.77 4.35
419 420 3.460103 GGCACGGATAGTTTTATTCCGA 58.540 45.455 16.62 0.00 45.77 4.55
476 477 1.893544 AACGAAGGAGACGTCTCTCA 58.106 50.000 36.98 0.00 44.50 3.27
478 479 2.485038 GAGAAACGAAGGAGACGTCTCT 59.515 50.000 36.98 23.53 42.42 3.10
493 494 4.227864 AGGATGGATTGTGGAGAGAAAC 57.772 45.455 0.00 0.00 0.00 2.78
495 496 3.389329 GCTAGGATGGATTGTGGAGAGAA 59.611 47.826 0.00 0.00 0.00 2.87
496 497 2.968574 GCTAGGATGGATTGTGGAGAGA 59.031 50.000 0.00 0.00 0.00 3.10
523 534 9.750125 GAATTTTCTCAACACTTCCATTTTAGT 57.250 29.630 0.00 0.00 0.00 2.24
524 535 8.905702 CGAATTTTCTCAACACTTCCATTTTAG 58.094 33.333 0.00 0.00 0.00 1.85
549 561 2.127496 CGCAGCTCACTTTGCACG 60.127 61.111 0.00 0.00 40.28 5.34
708 720 2.124860 TCGTCGAGGATGCCGAGA 60.125 61.111 3.17 0.00 36.66 4.04
722 734 1.541588 GGAGGTACGTGTAAAGGTCGT 59.458 52.381 0.00 0.00 40.78 4.34
924 936 0.037326 GCAGGGACGTGAGAATGTGA 60.037 55.000 0.00 0.00 0.00 3.58
1063 1075 2.436109 GGCAACAGCTTCCCTGGA 59.564 61.111 0.00 0.00 46.14 3.86
1162 1174 4.733542 CCCGGTGCCCAAATCCGT 62.734 66.667 0.00 0.00 42.30 4.69
1216 1228 1.714899 GCCACAAACACACTGCTCGT 61.715 55.000 0.00 0.00 0.00 4.18
1258 1270 1.729276 CCATCGCACCGCATTTGAT 59.271 52.632 0.00 0.00 0.00 2.57
1271 1283 3.142838 CCCTTGCCTTGGCCATCG 61.143 66.667 6.09 0.00 0.00 3.84
1346 1358 0.393808 ATGCCCGTTGGAAGCGTATT 60.394 50.000 0.00 0.00 0.00 1.89
1492 1504 1.075482 CCCAGTCCACCACAGCAAT 59.925 57.895 0.00 0.00 0.00 3.56
1713 1725 7.162761 TGAAAGTCATGCCATTCAATTTCATT 58.837 30.769 5.37 0.00 32.24 2.57
1855 1867 0.317436 GCGCGACTGAGAAGATCGAT 60.317 55.000 12.10 0.00 38.10 3.59
1935 1947 0.179020 CAAGAAGTGCACCCCAGACA 60.179 55.000 14.63 0.00 0.00 3.41
2242 2254 3.640029 CCTATGGCTTTCATTTCCATGCT 59.360 43.478 3.46 0.00 40.52 3.79
2273 2285 4.161377 GCTCCTTCTCCTCATCAGTAGTTT 59.839 45.833 0.00 0.00 0.00 2.66
2299 3511 2.164422 TCACGCTGTGATGAACTAGAGG 59.836 50.000 0.00 0.00 37.67 3.69
2318 3530 0.665835 AAATGCAACGGCGAGTTTCA 59.334 45.000 16.62 0.00 45.35 2.69
2478 3690 3.693085 AGCAACTGCCATATCTGAAACAG 59.307 43.478 0.00 0.00 43.38 3.16
2488 3700 4.635765 GTCATTACAAGAGCAACTGCCATA 59.364 41.667 0.00 0.00 43.38 2.74
2493 3705 5.349817 CCAGTAGTCATTACAAGAGCAACTG 59.650 44.000 0.00 0.00 34.56 3.16
2494 3706 5.012148 ACCAGTAGTCATTACAAGAGCAACT 59.988 40.000 0.00 0.00 34.56 3.16
2589 3801 7.303634 ACGGCATGTGTAACTAAAAATCTAG 57.696 36.000 0.00 0.00 38.04 2.43
2630 3848 4.385825 ACTTACAGCCGAAACAATTGAGA 58.614 39.130 13.59 0.00 0.00 3.27
2667 3885 9.983804 GTGATAAATAGTAGCTGTAAACAAACC 57.016 33.333 0.00 0.00 0.00 3.27
2729 3947 7.973402 AGAAATTTAACAACTAAAAGGGGCAT 58.027 30.769 0.00 0.00 33.20 4.40
2740 3958 9.797556 GAAAGTACACCAAGAAATTTAACAACT 57.202 29.630 0.00 0.00 0.00 3.16
2757 3975 4.273148 ACACCAGGATCTGAAAGTACAC 57.727 45.455 0.00 0.00 32.44 2.90
2785 4003 6.259387 TGCTCAAATGAATGTATCTAGCACTG 59.741 38.462 0.00 0.00 32.88 3.66
2786 4004 6.351711 TGCTCAAATGAATGTATCTAGCACT 58.648 36.000 0.00 0.00 32.88 4.40
2787 4005 6.609237 TGCTCAAATGAATGTATCTAGCAC 57.391 37.500 0.00 0.00 32.88 4.40
2788 4006 6.598850 TGTTGCTCAAATGAATGTATCTAGCA 59.401 34.615 0.00 0.00 35.79 3.49
2789 4007 7.019774 TGTTGCTCAAATGAATGTATCTAGC 57.980 36.000 0.00 0.00 0.00 3.42
2791 4009 8.565896 ACTTGTTGCTCAAATGAATGTATCTA 57.434 30.769 0.00 0.00 35.48 1.98
2793 4011 9.793252 ATTACTTGTTGCTCAAATGAATGTATC 57.207 29.630 0.00 0.00 35.48 2.24
2794 4012 9.793252 GATTACTTGTTGCTCAAATGAATGTAT 57.207 29.630 0.00 0.00 35.48 2.29
2795 4013 8.243426 GGATTACTTGTTGCTCAAATGAATGTA 58.757 33.333 0.00 0.00 35.48 2.29
2796 4014 7.092716 GGATTACTTGTTGCTCAAATGAATGT 58.907 34.615 0.00 0.00 35.48 2.71
2798 4016 6.625740 CGGGATTACTTGTTGCTCAAATGAAT 60.626 38.462 0.00 0.00 35.48 2.57
2800 4018 4.155826 CGGGATTACTTGTTGCTCAAATGA 59.844 41.667 0.00 0.00 35.48 2.57
2804 4022 2.039216 TCCGGGATTACTTGTTGCTCAA 59.961 45.455 0.00 0.00 34.61 3.02
2805 4023 1.626321 TCCGGGATTACTTGTTGCTCA 59.374 47.619 0.00 0.00 0.00 4.26
2808 4026 0.725117 CGTCCGGGATTACTTGTTGC 59.275 55.000 0.00 0.00 0.00 4.17
2809 4027 1.066716 TCCGTCCGGGATTACTTGTTG 60.067 52.381 0.00 0.00 40.94 3.33
2811 4029 0.822164 CTCCGTCCGGGATTACTTGT 59.178 55.000 0.00 0.00 46.04 3.16
2812 4030 0.104304 CCTCCGTCCGGGATTACTTG 59.896 60.000 0.00 0.00 46.04 3.16
2814 4032 0.032813 TTCCTCCGTCCGGGATTACT 60.033 55.000 0.00 0.00 46.04 2.24
2815 4033 0.388294 CTTCCTCCGTCCGGGATTAC 59.612 60.000 0.00 0.00 46.04 1.89
2816 4034 0.032813 ACTTCCTCCGTCCGGGATTA 60.033 55.000 0.00 0.00 46.04 1.75
2817 4035 0.032813 TACTTCCTCCGTCCGGGATT 60.033 55.000 0.00 0.00 46.04 3.01
2818 4036 0.187851 ATACTTCCTCCGTCCGGGAT 59.812 55.000 0.00 0.00 46.04 3.85
2820 4038 0.754217 TCATACTTCCTCCGTCCGGG 60.754 60.000 0.00 0.00 35.59 5.73
2821 4039 1.000163 CATCATACTTCCTCCGTCCGG 60.000 57.143 0.00 0.00 0.00 5.14
2822 4040 1.603172 GCATCATACTTCCTCCGTCCG 60.603 57.143 0.00 0.00 0.00 4.79
2823 4041 1.412710 TGCATCATACTTCCTCCGTCC 59.587 52.381 0.00 0.00 0.00 4.79
2824 4042 2.890808 TGCATCATACTTCCTCCGTC 57.109 50.000 0.00 0.00 0.00 4.79
2825 4043 2.700371 TCATGCATCATACTTCCTCCGT 59.300 45.455 0.00 0.00 0.00 4.69
2826 4044 3.391506 TCATGCATCATACTTCCTCCG 57.608 47.619 0.00 0.00 0.00 4.63
2828 4046 5.505324 GCAAGTTCATGCATCATACTTCCTC 60.505 44.000 12.36 4.73 45.70 3.71
2830 4048 4.604976 GCAAGTTCATGCATCATACTTCC 58.395 43.478 12.36 3.45 45.70 3.46
2841 4059 5.464168 ACAACTAATTCTGCAAGTTCATGC 58.536 37.500 0.00 0.00 46.58 4.06
2842 4060 6.129009 GCAACAACTAATTCTGCAAGTTCATG 60.129 38.462 0.00 2.61 31.21 3.07
2843 4061 5.922544 GCAACAACTAATTCTGCAAGTTCAT 59.077 36.000 0.00 0.00 31.21 2.57
2844 4062 5.163571 TGCAACAACTAATTCTGCAAGTTCA 60.164 36.000 0.00 0.00 39.91 3.18
2845 4063 5.280945 TGCAACAACTAATTCTGCAAGTTC 58.719 37.500 0.00 0.00 39.91 3.01
2846 4064 5.261209 TGCAACAACTAATTCTGCAAGTT 57.739 34.783 0.00 0.00 39.91 2.66
2847 4065 4.916983 TGCAACAACTAATTCTGCAAGT 57.083 36.364 0.00 0.00 39.91 3.16
2852 4070 8.863049 GGTCAAATATTGCAACAACTAATTCTG 58.137 33.333 0.00 0.00 0.00 3.02
2865 4083 2.670789 GCAACGCAGGTCAAATATTGCA 60.671 45.455 0.00 0.00 40.46 4.08
2866 4084 1.919918 GCAACGCAGGTCAAATATTGC 59.080 47.619 0.00 0.00 34.77 3.56
2871 4089 0.877071 CTGAGCAACGCAGGTCAAAT 59.123 50.000 10.24 0.00 44.44 2.32
2878 4096 0.940126 AACTGTTCTGAGCAACGCAG 59.060 50.000 0.00 0.00 32.70 5.18
2917 4135 5.523369 TGAGTCATATGTATCTGCAGTTCG 58.477 41.667 14.67 0.00 0.00 3.95
2924 4142 7.763528 GCCTTATCCTTGAGTCATATGTATCTG 59.236 40.741 1.90 1.02 0.00 2.90
2930 4148 9.160496 GATTTAGCCTTATCCTTGAGTCATATG 57.840 37.037 0.00 0.00 0.00 1.78
2937 4155 7.655490 CATTTGGATTTAGCCTTATCCTTGAG 58.345 38.462 9.27 0.00 40.80 3.02
2940 4158 5.898972 TGCATTTGGATTTAGCCTTATCCTT 59.101 36.000 9.27 0.00 40.80 3.36
2942 4160 5.789643 TGCATTTGGATTTAGCCTTATCC 57.210 39.130 0.00 0.00 40.62 2.59
2944 4162 7.289782 TGGTTATGCATTTGGATTTAGCCTTAT 59.710 33.333 3.54 0.00 0.00 1.73
2945 4163 6.609212 TGGTTATGCATTTGGATTTAGCCTTA 59.391 34.615 3.54 0.00 0.00 2.69
2947 4165 4.961730 TGGTTATGCATTTGGATTTAGCCT 59.038 37.500 3.54 0.00 0.00 4.58
2991 4246 8.845227 TCAAGAGTAAAAATGTATTGCTCACAA 58.155 29.630 7.04 0.00 40.60 3.33
2992 4247 8.389779 TCAAGAGTAAAAATGTATTGCTCACA 57.610 30.769 7.04 0.00 40.60 3.58
2993 4248 9.282247 CATCAAGAGTAAAAATGTATTGCTCAC 57.718 33.333 7.04 0.00 40.60 3.51
2994 4249 7.970061 GCATCAAGAGTAAAAATGTATTGCTCA 59.030 33.333 7.04 0.00 40.60 4.26
2995 4250 8.186821 AGCATCAAGAGTAAAAATGTATTGCTC 58.813 33.333 0.00 0.00 39.08 4.26
2996 4251 8.059798 AGCATCAAGAGTAAAAATGTATTGCT 57.940 30.769 0.00 0.00 0.00 3.91
3015 4271 2.041485 TGGACATTCCTGGAAAGCATCA 59.959 45.455 14.03 5.76 37.46 3.07
3041 4297 1.534595 GAGGTTCTTGCTGCAGAAGTG 59.465 52.381 20.43 3.97 33.29 3.16
3042 4298 1.141657 TGAGGTTCTTGCTGCAGAAGT 59.858 47.619 20.43 2.49 33.29 3.01
3043 4299 1.888215 TGAGGTTCTTGCTGCAGAAG 58.112 50.000 20.43 17.37 33.29 2.85
3044 4300 2.346766 TTGAGGTTCTTGCTGCAGAA 57.653 45.000 20.43 2.96 0.00 3.02
3045 4301 2.574006 ATTGAGGTTCTTGCTGCAGA 57.426 45.000 20.43 0.00 0.00 4.26
3046 4302 3.943381 TCATATTGAGGTTCTTGCTGCAG 59.057 43.478 10.11 10.11 0.00 4.41
3087 4349 2.447408 TGATGGAGCTCGGTTACCTA 57.553 50.000 7.83 0.00 0.00 3.08
3098 4360 2.479656 GCGAGATCTTGAATGATGGAGC 59.520 50.000 14.59 0.00 0.00 4.70
3102 4364 5.981915 TCAAGTAGCGAGATCTTGAATGATG 59.018 40.000 14.59 6.65 42.61 3.07
3109 4371 6.533012 TCTGAATTTCAAGTAGCGAGATCTTG 59.467 38.462 5.50 5.50 39.59 3.02
3120 4382 7.749377 TCCTTAGGGATCTGAATTTCAAGTA 57.251 36.000 0.00 0.00 36.57 2.24
3138 4400 7.338449 GCTGGAGATACTCTTAGGTATCCTTAG 59.662 44.444 13.42 10.99 45.29 2.18
3144 4406 5.959512 ACTGCTGGAGATACTCTTAGGTAT 58.040 41.667 2.24 0.00 35.39 2.73
3145 4407 5.390087 ACTGCTGGAGATACTCTTAGGTA 57.610 43.478 2.24 0.00 0.00 3.08
3174 4436 8.732746 AAACGCATCTATAGGTGAAGTTTTAT 57.267 30.769 23.10 10.65 29.78 1.40
3175 4437 9.309516 CTAAACGCATCTATAGGTGAAGTTTTA 57.690 33.333 28.69 18.41 33.32 1.52
3190 4452 0.912486 AAGAGCCCCTAAACGCATCT 59.088 50.000 0.00 0.00 0.00 2.90
3193 4455 1.198759 AGGAAGAGCCCCTAAACGCA 61.199 55.000 0.00 0.00 37.37 5.24
3194 4456 0.744771 CAGGAAGAGCCCCTAAACGC 60.745 60.000 0.00 0.00 37.37 4.84
3196 4458 3.994931 TTACAGGAAGAGCCCCTAAAC 57.005 47.619 0.00 0.00 37.37 2.01
3204 4466 6.655425 ACACCTAGAAATTTTACAGGAAGAGC 59.345 38.462 16.33 0.00 0.00 4.09
3205 4467 7.878127 TCACACCTAGAAATTTTACAGGAAGAG 59.122 37.037 16.33 9.45 0.00 2.85
3210 4472 7.230712 ACCTTTCACACCTAGAAATTTTACAGG 59.769 37.037 10.51 10.51 34.75 4.00
3213 4475 7.860872 CACACCTTTCACACCTAGAAATTTTAC 59.139 37.037 0.00 0.00 34.75 2.01
3224 4486 0.751643 GCCACACACCTTTCACACCT 60.752 55.000 0.00 0.00 0.00 4.00
3236 4498 1.209504 GGGAACTGCTATAGCCACACA 59.790 52.381 21.84 1.82 41.18 3.72
3245 4507 3.190439 AGGTTTACTGGGGAACTGCTAT 58.810 45.455 0.00 0.00 0.00 2.97
3248 4510 1.351350 AGAGGTTTACTGGGGAACTGC 59.649 52.381 0.00 0.00 0.00 4.40
3258 4520 3.449377 GCCAGCTTAGAGAGAGGTTTACT 59.551 47.826 0.00 0.00 0.00 2.24
3259 4521 3.431068 GGCCAGCTTAGAGAGAGGTTTAC 60.431 52.174 0.00 0.00 0.00 2.01
3275 4537 1.755179 AACACATATGTCAGGCCAGC 58.245 50.000 5.01 0.00 38.45 4.85
3277 4539 3.431673 TGAAACACATATGTCAGGCCA 57.568 42.857 5.01 0.00 38.45 5.36
3278 4540 3.696051 ACATGAAACACATATGTCAGGCC 59.304 43.478 5.07 0.00 38.45 5.19
3288 4551 1.879380 CCACGGACACATGAAACACAT 59.121 47.619 0.00 0.00 40.17 3.21
3298 4561 1.476891 GAGAGATTAGCCACGGACACA 59.523 52.381 0.00 0.00 0.00 3.72
3299 4562 1.751924 AGAGAGATTAGCCACGGACAC 59.248 52.381 0.00 0.00 0.00 3.67
3300 4563 2.025155 GAGAGAGATTAGCCACGGACA 58.975 52.381 0.00 0.00 0.00 4.02
3301 4564 2.303175 AGAGAGAGATTAGCCACGGAC 58.697 52.381 0.00 0.00 0.00 4.79
3302 4565 2.738587 AGAGAGAGATTAGCCACGGA 57.261 50.000 0.00 0.00 0.00 4.69
3303 4566 4.331968 AGATAGAGAGAGATTAGCCACGG 58.668 47.826 0.00 0.00 0.00 4.94
3304 4567 5.957842 AAGATAGAGAGAGATTAGCCACG 57.042 43.478 0.00 0.00 0.00 4.94
3305 4568 7.448469 AGAGAAAGATAGAGAGAGATTAGCCAC 59.552 40.741 0.00 0.00 0.00 5.01
3306 4569 7.526041 AGAGAAAGATAGAGAGAGATTAGCCA 58.474 38.462 0.00 0.00 0.00 4.75
3307 4570 7.121315 GGAGAGAAAGATAGAGAGAGATTAGCC 59.879 44.444 0.00 0.00 0.00 3.93
3308 4571 7.148407 CGGAGAGAAAGATAGAGAGAGATTAGC 60.148 44.444 0.00 0.00 0.00 3.09
3309 4572 7.334421 CCGGAGAGAAAGATAGAGAGAGATTAG 59.666 44.444 0.00 0.00 0.00 1.73
3310 4573 7.165485 CCGGAGAGAAAGATAGAGAGAGATTA 58.835 42.308 0.00 0.00 0.00 1.75
3311 4574 6.003950 CCGGAGAGAAAGATAGAGAGAGATT 58.996 44.000 0.00 0.00 0.00 2.40
3312 4575 5.560724 CCGGAGAGAAAGATAGAGAGAGAT 58.439 45.833 0.00 0.00 0.00 2.75
3313 4576 4.745478 GCCGGAGAGAAAGATAGAGAGAGA 60.745 50.000 5.05 0.00 0.00 3.10
3314 4577 3.502211 GCCGGAGAGAAAGATAGAGAGAG 59.498 52.174 5.05 0.00 0.00 3.20
3315 4578 3.482436 GCCGGAGAGAAAGATAGAGAGA 58.518 50.000 5.05 0.00 0.00 3.10
3316 4579 2.225491 CGCCGGAGAGAAAGATAGAGAG 59.775 54.545 5.05 0.00 0.00 3.20
3317 4580 2.222886 CGCCGGAGAGAAAGATAGAGA 58.777 52.381 5.05 0.00 0.00 3.10
3318 4581 1.950909 ACGCCGGAGAGAAAGATAGAG 59.049 52.381 13.83 0.00 0.00 2.43
3319 4582 1.676529 CACGCCGGAGAGAAAGATAGA 59.323 52.381 13.83 0.00 0.00 1.98
3320 4583 1.866063 GCACGCCGGAGAGAAAGATAG 60.866 57.143 13.83 0.00 0.00 2.08
3321 4584 0.102481 GCACGCCGGAGAGAAAGATA 59.898 55.000 13.83 0.00 0.00 1.98
3322 4585 1.153549 GCACGCCGGAGAGAAAGAT 60.154 57.895 13.83 0.00 0.00 2.40
3323 4586 2.261671 GCACGCCGGAGAGAAAGA 59.738 61.111 13.83 0.00 0.00 2.52
3324 4587 2.048222 TGCACGCCGGAGAGAAAG 60.048 61.111 13.83 0.00 0.00 2.62
3325 4588 2.357034 GTGCACGCCGGAGAGAAA 60.357 61.111 13.83 0.00 0.00 2.52
3326 4589 4.717629 CGTGCACGCCGGAGAGAA 62.718 66.667 28.16 0.00 0.00 2.87
3328 4591 4.717629 TTCGTGCACGCCGGAGAG 62.718 66.667 33.63 4.90 39.60 3.20
3329 4592 4.717629 CTTCGTGCACGCCGGAGA 62.718 66.667 33.63 13.42 39.60 3.71
3330 4593 4.717629 TCTTCGTGCACGCCGGAG 62.718 66.667 33.63 24.85 39.60 4.63
3333 4596 4.059459 GTGTCTTCGTGCACGCCG 62.059 66.667 33.63 24.73 39.60 6.46
3334 4597 3.712881 GGTGTCTTCGTGCACGCC 61.713 66.667 33.63 23.18 39.60 5.68
3335 4598 4.059459 CGGTGTCTTCGTGCACGC 62.059 66.667 33.63 20.00 39.60 5.34
3336 4599 0.455464 TATCGGTGTCTTCGTGCACG 60.455 55.000 32.76 32.76 41.45 5.34
3337 4600 1.135489 TCTATCGGTGTCTTCGTGCAC 60.135 52.381 6.82 6.82 35.07 4.57
3338 4601 1.132453 CTCTATCGGTGTCTTCGTGCA 59.868 52.381 0.00 0.00 0.00 4.57
3339 4602 1.828832 CTCTATCGGTGTCTTCGTGC 58.171 55.000 0.00 0.00 0.00 5.34
3340 4603 1.402259 AGCTCTATCGGTGTCTTCGTG 59.598 52.381 0.00 0.00 0.00 4.35
3341 4604 1.671845 GAGCTCTATCGGTGTCTTCGT 59.328 52.381 6.43 0.00 0.00 3.85
3342 4605 1.002251 GGAGCTCTATCGGTGTCTTCG 60.002 57.143 14.64 0.00 0.00 3.79
3343 4606 1.002251 CGGAGCTCTATCGGTGTCTTC 60.002 57.143 14.64 0.00 0.00 2.87
3344 4607 1.025812 CGGAGCTCTATCGGTGTCTT 58.974 55.000 14.64 0.00 0.00 3.01
3345 4608 0.820074 CCGGAGCTCTATCGGTGTCT 60.820 60.000 18.50 0.00 39.04 3.41
3346 4609 1.655329 CCGGAGCTCTATCGGTGTC 59.345 63.158 18.50 0.00 39.04 3.67
3347 4610 2.491022 GCCGGAGCTCTATCGGTGT 61.491 63.158 24.69 0.00 44.97 4.16
3348 4611 2.336809 GCCGGAGCTCTATCGGTG 59.663 66.667 24.69 7.11 44.97 4.94
3349 4612 3.288290 CGCCGGAGCTCTATCGGT 61.288 66.667 24.69 0.00 44.97 4.69
3350 4613 2.978565 TCGCCGGAGCTCTATCGG 60.979 66.667 21.39 21.39 45.84 4.18
3351 4614 2.252855 GTCGCCGGAGCTCTATCG 59.747 66.667 14.64 13.74 36.60 2.92
3352 4615 2.646143 GGTCGCCGGAGCTCTATC 59.354 66.667 14.64 1.73 37.68 2.08
3369 4632 4.142403 TGCTCCTAAAATCAAAATCCGCAG 60.142 41.667 0.00 0.00 0.00 5.18
3370 4633 3.761218 TGCTCCTAAAATCAAAATCCGCA 59.239 39.130 0.00 0.00 0.00 5.69
3371 4634 4.370364 TGCTCCTAAAATCAAAATCCGC 57.630 40.909 0.00 0.00 0.00 5.54
3372 4635 7.035004 TCAAATGCTCCTAAAATCAAAATCCG 58.965 34.615 0.00 0.00 0.00 4.18
3373 4636 8.776376 TTCAAATGCTCCTAAAATCAAAATCC 57.224 30.769 0.00 0.00 0.00 3.01
3401 4664 7.616313 AGTAAAAGTGATGTTTGGGTCAAAAA 58.384 30.769 0.00 0.00 35.03 1.94
3402 4665 7.123547 AGAGTAAAAGTGATGTTTGGGTCAAAA 59.876 33.333 0.00 0.00 35.03 2.44
3403 4666 6.605594 AGAGTAAAAGTGATGTTTGGGTCAAA 59.394 34.615 0.00 0.00 0.00 2.69
3404 4667 6.126409 AGAGTAAAAGTGATGTTTGGGTCAA 58.874 36.000 0.00 0.00 0.00 3.18
3405 4668 5.690865 AGAGTAAAAGTGATGTTTGGGTCA 58.309 37.500 0.00 0.00 0.00 4.02
3406 4669 6.635030 AAGAGTAAAAGTGATGTTTGGGTC 57.365 37.500 0.00 0.00 0.00 4.46
3407 4670 8.528044 TTAAAGAGTAAAAGTGATGTTTGGGT 57.472 30.769 0.00 0.00 0.00 4.51
3408 4671 9.981114 ATTTAAAGAGTAAAAGTGATGTTTGGG 57.019 29.630 0.00 0.00 0.00 4.12
3426 4689 9.862149 AGGTCTCCTAAAACTCAAATTTAAAGA 57.138 29.630 6.73 0.00 28.47 2.52
3427 4690 9.899226 CAGGTCTCCTAAAACTCAAATTTAAAG 57.101 33.333 0.00 0.00 29.64 1.85
3428 4691 8.357402 GCAGGTCTCCTAAAACTCAAATTTAAA 58.643 33.333 0.00 0.00 29.64 1.52
3429 4692 7.724061 AGCAGGTCTCCTAAAACTCAAATTTAA 59.276 33.333 0.00 0.00 29.64 1.52
3430 4693 7.231467 AGCAGGTCTCCTAAAACTCAAATTTA 58.769 34.615 0.00 0.00 29.64 1.40
3431 4694 6.071320 AGCAGGTCTCCTAAAACTCAAATTT 58.929 36.000 0.00 0.00 29.64 1.82
3432 4695 5.635120 AGCAGGTCTCCTAAAACTCAAATT 58.365 37.500 0.00 0.00 29.64 1.82
3433 4696 5.248380 AGCAGGTCTCCTAAAACTCAAAT 57.752 39.130 0.00 0.00 29.64 2.32
3434 4697 4.706842 AGCAGGTCTCCTAAAACTCAAA 57.293 40.909 0.00 0.00 29.64 2.69
3435 4698 5.084519 TCTAGCAGGTCTCCTAAAACTCAA 58.915 41.667 0.00 0.00 29.64 3.02
3436 4699 4.673968 TCTAGCAGGTCTCCTAAAACTCA 58.326 43.478 0.00 0.00 29.64 3.41
3437 4700 4.951094 TCTCTAGCAGGTCTCCTAAAACTC 59.049 45.833 0.00 0.00 29.64 3.01
3438 4701 4.936802 TCTCTAGCAGGTCTCCTAAAACT 58.063 43.478 0.00 0.00 29.64 2.66
3439 4702 5.452636 CCATCTCTAGCAGGTCTCCTAAAAC 60.453 48.000 0.00 0.00 29.64 2.43
3440 4703 4.651503 CCATCTCTAGCAGGTCTCCTAAAA 59.348 45.833 0.00 0.00 29.64 1.52
3441 4704 4.219115 CCATCTCTAGCAGGTCTCCTAAA 58.781 47.826 0.00 0.00 29.64 1.85
3442 4705 3.205507 ACCATCTCTAGCAGGTCTCCTAA 59.794 47.826 0.00 0.00 29.64 2.69
3443 4706 2.786445 ACCATCTCTAGCAGGTCTCCTA 59.214 50.000 0.00 0.00 29.64 2.94
3444 4707 1.573376 ACCATCTCTAGCAGGTCTCCT 59.427 52.381 0.00 0.00 0.00 3.69
3445 4708 1.960689 GACCATCTCTAGCAGGTCTCC 59.039 57.143 12.55 0.00 45.46 3.71
3449 4712 2.243478 TCTCAGACCATCTCTAGCAGGT 59.757 50.000 0.00 0.00 37.00 4.00
3450 4713 2.886523 CTCTCAGACCATCTCTAGCAGG 59.113 54.545 0.00 0.00 0.00 4.85
3451 4714 3.817084 CTCTCTCAGACCATCTCTAGCAG 59.183 52.174 0.00 0.00 0.00 4.24
3452 4715 3.819368 CTCTCTCAGACCATCTCTAGCA 58.181 50.000 0.00 0.00 0.00 3.49
3453 4716 2.554032 GCTCTCTCAGACCATCTCTAGC 59.446 54.545 0.00 0.00 0.00 3.42
3454 4717 3.819368 TGCTCTCTCAGACCATCTCTAG 58.181 50.000 0.00 0.00 0.00 2.43
3455 4718 3.941704 TGCTCTCTCAGACCATCTCTA 57.058 47.619 0.00 0.00 0.00 2.43
3456 4719 2.824689 TGCTCTCTCAGACCATCTCT 57.175 50.000 0.00 0.00 0.00 3.10
3457 4720 3.056250 TGTTTGCTCTCTCAGACCATCTC 60.056 47.826 0.00 0.00 0.00 2.75
3458 4721 2.902486 TGTTTGCTCTCTCAGACCATCT 59.098 45.455 0.00 0.00 0.00 2.90
3459 4722 3.325293 TGTTTGCTCTCTCAGACCATC 57.675 47.619 0.00 0.00 0.00 3.51
3460 4723 3.996921 ATGTTTGCTCTCTCAGACCAT 57.003 42.857 0.00 0.00 0.00 3.55
3461 4724 4.890158 TTATGTTTGCTCTCTCAGACCA 57.110 40.909 0.00 0.00 0.00 4.02
3462 4725 6.989169 ACATATTATGTTTGCTCTCTCAGACC 59.011 38.462 3.40 0.00 41.63 3.85
3463 4726 7.493971 ACACATATTATGTTTGCTCTCTCAGAC 59.506 37.037 6.58 0.00 42.70 3.51
3464 4727 7.559486 ACACATATTATGTTTGCTCTCTCAGA 58.441 34.615 6.58 0.00 42.70 3.27
3465 4728 7.042187 GGACACATATTATGTTTGCTCTCTCAG 60.042 40.741 6.58 0.00 42.70 3.35
3466 4729 6.763135 GGACACATATTATGTTTGCTCTCTCA 59.237 38.462 6.58 0.00 42.70 3.27
3467 4730 6.203723 GGGACACATATTATGTTTGCTCTCTC 59.796 42.308 6.58 0.00 42.70 3.20
3468 4731 6.058183 GGGACACATATTATGTTTGCTCTCT 58.942 40.000 6.58 0.00 42.70 3.10
3469 4732 6.017605 CAGGGACACATATTATGTTTGCTCTC 60.018 42.308 6.58 0.71 42.70 3.20
3470 4733 5.824624 CAGGGACACATATTATGTTTGCTCT 59.175 40.000 6.58 2.46 42.70 4.09
3471 4734 5.822519 TCAGGGACACATATTATGTTTGCTC 59.177 40.000 6.58 0.30 42.70 4.26
3472 4735 5.754782 TCAGGGACACATATTATGTTTGCT 58.245 37.500 6.58 0.00 42.70 3.91
3473 4736 5.822519 TCTCAGGGACACATATTATGTTTGC 59.177 40.000 6.58 6.28 42.70 3.68
3474 4737 7.336679 TGTTCTCAGGGACACATATTATGTTTG 59.663 37.037 6.58 0.24 42.70 2.93
3475 4738 7.402054 TGTTCTCAGGGACACATATTATGTTT 58.598 34.615 6.58 0.77 42.70 2.83
3476 4739 6.957631 TGTTCTCAGGGACACATATTATGTT 58.042 36.000 6.58 0.00 42.70 2.71
3477 4740 6.560003 TGTTCTCAGGGACACATATTATGT 57.440 37.500 3.40 3.40 46.22 2.29
3478 4741 7.173907 GGAATGTTCTCAGGGACACATATTATG 59.826 40.741 2.03 2.03 31.00 1.90
3479 4742 7.227156 GGAATGTTCTCAGGGACACATATTAT 58.773 38.462 0.22 0.00 31.00 1.28
3480 4743 6.591935 GGAATGTTCTCAGGGACACATATTA 58.408 40.000 0.22 0.00 31.00 0.98
3481 4744 5.440610 GGAATGTTCTCAGGGACACATATT 58.559 41.667 0.22 0.00 31.00 1.28
3482 4745 4.443457 CGGAATGTTCTCAGGGACACATAT 60.443 45.833 0.22 0.00 31.00 1.78
3483 4746 3.118775 CGGAATGTTCTCAGGGACACATA 60.119 47.826 0.22 0.00 31.00 2.29
3484 4747 2.355108 CGGAATGTTCTCAGGGACACAT 60.355 50.000 0.00 0.00 31.81 3.21
3485 4748 1.001974 CGGAATGTTCTCAGGGACACA 59.998 52.381 0.00 0.00 0.00 3.72
3486 4749 1.275291 TCGGAATGTTCTCAGGGACAC 59.725 52.381 0.00 0.00 0.00 3.67
3487 4750 1.550524 CTCGGAATGTTCTCAGGGACA 59.449 52.381 0.00 0.00 0.00 4.02
3488 4751 1.825474 TCTCGGAATGTTCTCAGGGAC 59.175 52.381 0.00 0.00 0.00 4.46
3489 4752 2.103373 CTCTCGGAATGTTCTCAGGGA 58.897 52.381 0.00 0.00 0.00 4.20
3490 4753 2.100584 CTCTCTCGGAATGTTCTCAGGG 59.899 54.545 0.00 0.00 0.00 4.45
3491 4754 2.481104 GCTCTCTCGGAATGTTCTCAGG 60.481 54.545 0.00 0.00 0.00 3.86
3492 4755 2.165234 TGCTCTCTCGGAATGTTCTCAG 59.835 50.000 0.00 0.00 0.00 3.35
3493 4756 2.171003 TGCTCTCTCGGAATGTTCTCA 58.829 47.619 0.00 0.00 0.00 3.27
3494 4757 2.949451 TGCTCTCTCGGAATGTTCTC 57.051 50.000 0.00 0.00 0.00 2.87
3495 4758 3.244215 TGTTTGCTCTCTCGGAATGTTCT 60.244 43.478 0.00 0.00 0.00 3.01
3496 4759 3.067106 TGTTTGCTCTCTCGGAATGTTC 58.933 45.455 0.00 0.00 0.00 3.18
3497 4760 3.126001 TGTTTGCTCTCTCGGAATGTT 57.874 42.857 0.00 0.00 0.00 2.71
3498 4761 2.839486 TGTTTGCTCTCTCGGAATGT 57.161 45.000 0.00 0.00 0.00 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.