Multiple sequence alignment - TraesCS5D01G141400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G141400 chr5D 100.000 5224 0 0 1 5224 225580717 225585940 0.000000e+00 9648.0
1 TraesCS5D01G141400 chr5A 92.427 2826 144 36 573 3363 300114524 300117314 0.000000e+00 3969.0
2 TraesCS5D01G141400 chr5A 93.057 749 30 7 3444 4192 300117699 300118425 0.000000e+00 1075.0
3 TraesCS5D01G141400 chr5A 82.898 421 41 14 165 561 300110798 300111211 2.990000e-92 350.0
4 TraesCS5D01G141400 chr5A 88.889 162 17 1 7 168 300110600 300110760 1.150000e-46 198.0
5 TraesCS5D01G141400 chr5A 95.652 92 4 0 3359 3450 526875313 526875404 1.170000e-31 148.0
6 TraesCS5D01G141400 chr5B 92.047 1031 39 19 819 1839 245831114 245830117 0.000000e+00 1410.0
7 TraesCS5D01G141400 chr5B 94.181 842 32 9 1832 2663 245829931 245829097 0.000000e+00 1267.0
8 TraesCS5D01G141400 chr5B 92.829 753 42 4 3443 4195 245828533 245827793 0.000000e+00 1081.0
9 TraesCS5D01G141400 chr5B 93.007 572 33 5 2798 3363 245829100 245828530 0.000000e+00 828.0
10 TraesCS5D01G141400 chr5B 82.998 447 41 12 4281 4705 245825276 245824843 6.390000e-99 372.0
11 TraesCS5D01G141400 chr5B 84.034 357 47 5 4829 5185 245824848 245824502 8.380000e-88 335.0
12 TraesCS5D01G141400 chr5B 92.233 103 7 1 3354 3455 62940416 62940314 1.520000e-30 145.0
13 TraesCS5D01G141400 chr5B 100.000 29 0 0 450 478 245962689 245962661 3.000000e-03 54.7
14 TraesCS5D01G141400 chr7D 97.849 93 2 0 3354 3446 498226660 498226568 1.510000e-35 161.0
15 TraesCS5D01G141400 chr1B 84.615 156 22 2 5 159 160307911 160308065 2.520000e-33 154.0
16 TraesCS5D01G141400 chr1B 94.737 95 3 2 3362 3455 406341761 406341854 4.220000e-31 147.0
17 TraesCS5D01G141400 chr7B 95.652 92 3 1 3359 3449 701408268 701408177 4.220000e-31 147.0
18 TraesCS5D01G141400 chr7B 91.589 107 5 2 3344 3447 405051425 405051320 1.520000e-30 145.0
19 TraesCS5D01G141400 chr7B 100.000 28 0 0 4243 4270 87410975 87411002 9.000000e-03 52.8
20 TraesCS5D01G141400 chr4A 92.929 99 7 0 3354 3452 743442945 743443043 1.520000e-30 145.0
21 TraesCS5D01G141400 chr3D 88.034 117 11 3 3330 3446 402465328 402465441 9.120000e-28 135.0
22 TraesCS5D01G141400 chr3B 88.034 117 11 3 3330 3446 527901637 527901750 9.120000e-28 135.0
23 TraesCS5D01G141400 chr2B 80.576 139 26 1 1319 1457 776991644 776991781 7.150000e-19 106.0
24 TraesCS5D01G141400 chr1A 88.158 76 6 3 72 146 216413435 216413362 2.590000e-13 87.9
25 TraesCS5D01G141400 chr7A 90.000 60 4 2 4342 4401 721062566 721062623 5.610000e-10 76.8
26 TraesCS5D01G141400 chr6A 95.455 44 2 0 4226 4269 519690323 519690366 2.610000e-08 71.3
27 TraesCS5D01G141400 chr4D 83.871 62 8 2 4342 4402 41214738 41214798 2.030000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G141400 chr5D 225580717 225585940 5223 False 9648.000000 9648 100.000000 1 5224 1 chr5D.!!$F1 5223
1 TraesCS5D01G141400 chr5A 300110600 300118425 7825 False 1398.000000 3969 89.317750 7 4192 4 chr5A.!!$F2 4185
2 TraesCS5D01G141400 chr5B 245824502 245831114 6612 True 882.166667 1410 89.849333 819 5185 6 chr5B.!!$R3 4366

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
649 4015 0.041238 TCGATGGGGTCAGAGGAGTT 59.959 55.0 0.00 0.00 0.00 3.01 F
1146 4527 0.031585 GGGACAAAAGCGGAAACCAC 59.968 55.0 0.00 0.00 0.00 4.16 F
1681 5066 0.473117 AGTCTCCTCGGGGGTGAAAA 60.473 55.0 0.00 0.00 39.03 2.29 F
2670 6273 1.454572 TTGTGCTGAATGCTTGGCGT 61.455 50.0 0.00 0.00 43.37 5.68 F
3544 7463 1.177401 GGGCCTTCATTGAAGACACC 58.823 55.0 24.71 20.72 41.71 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1529 4912 1.043116 CGCTACCTCCCATGACAGGA 61.043 60.000 14.97 3.30 33.52 3.86 R
2825 6429 1.265095 CACCACACATGTTCTGAGCAC 59.735 52.381 0.00 0.00 0.00 4.40 R
2830 6434 3.002656 GTCTTGACACCACACATGTTCTG 59.997 47.826 0.00 0.00 0.00 3.02 R
3709 7628 0.247655 AACTGCGCGCAAATACATCG 60.248 50.000 35.50 22.26 0.00 3.84 R
5187 11554 0.103208 CTTCCTCCTCCGGATTCACG 59.897 60.000 3.57 0.00 32.02 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 3.809832 GCACTACTCACAATCACACAAGT 59.190 43.478 0.00 0.00 0.00 3.16
39 40 1.866601 TCACAATCACACAAGTGCGAG 59.133 47.619 0.00 0.00 45.49 5.03
43 44 2.238942 ATCACACAAGTGCGAGTTCA 57.761 45.000 0.00 0.00 45.49 3.18
87 88 4.947147 AGGTTTGCGCCGCCAAGA 62.947 61.111 6.63 0.00 0.00 3.02
105 106 1.135083 AGACGGACGATACAAAGCCAG 60.135 52.381 0.00 0.00 0.00 4.85
108 109 1.429148 GGACGATACAAAGCCAGCCG 61.429 60.000 0.00 0.00 0.00 5.52
109 110 1.429148 GACGATACAAAGCCAGCCGG 61.429 60.000 0.00 0.00 0.00 6.13
126 127 2.183555 GAACACGACGGCCTAGGG 59.816 66.667 11.72 0.00 0.00 3.53
155 156 5.944007 ACCCTATTACAAGTTAGTTGCCTTG 59.056 40.000 0.00 0.00 42.91 3.61
161 162 2.457366 AGTTAGTTGCCTTGTCTCGG 57.543 50.000 0.00 0.00 0.00 4.63
171 212 1.001378 CCTTGTCTCGGCCAAACAAAG 60.001 52.381 13.65 6.19 32.89 2.77
180 221 3.697045 TCGGCCAAACAAAGAGAAGAAAA 59.303 39.130 2.24 0.00 0.00 2.29
181 222 4.158764 TCGGCCAAACAAAGAGAAGAAAAA 59.841 37.500 2.24 0.00 0.00 1.94
182 223 4.504097 CGGCCAAACAAAGAGAAGAAAAAG 59.496 41.667 2.24 0.00 0.00 2.27
185 226 6.036083 GGCCAAACAAAGAGAAGAAAAAGAAC 59.964 38.462 0.00 0.00 0.00 3.01
202 243 3.123050 AGAACAATGCTTTTGCCGAAAC 58.877 40.909 0.60 0.00 46.87 2.78
203 244 2.593346 ACAATGCTTTTGCCGAAACA 57.407 40.000 0.60 0.00 46.87 2.83
204 245 2.898705 ACAATGCTTTTGCCGAAACAA 58.101 38.095 0.60 0.00 46.87 2.83
205 246 2.607180 ACAATGCTTTTGCCGAAACAAC 59.393 40.909 0.60 0.00 46.87 3.32
206 247 1.486439 ATGCTTTTGCCGAAACAACG 58.514 45.000 0.00 0.00 46.87 4.10
208 249 1.066303 TGCTTTTGCCGAAACAACGAT 59.934 42.857 0.00 0.00 46.87 3.73
210 251 3.057876 TGCTTTTGCCGAAACAACGATAT 60.058 39.130 0.00 0.00 46.87 1.63
211 252 3.300590 GCTTTTGCCGAAACAACGATATG 59.699 43.478 0.00 0.00 40.15 1.78
212 253 4.717991 CTTTTGCCGAAACAACGATATGA 58.282 39.130 0.00 0.00 35.09 2.15
213 254 3.733024 TTGCCGAAACAACGATATGAC 57.267 42.857 0.00 0.00 35.09 3.06
214 255 2.689646 TGCCGAAACAACGATATGACA 58.310 42.857 0.00 0.00 35.09 3.58
216 257 3.124466 TGCCGAAACAACGATATGACAAG 59.876 43.478 0.00 0.00 35.09 3.16
241 289 4.744795 ACTAGCCGTTTGATCTGAGATT 57.255 40.909 0.00 0.00 0.00 2.40
245 293 2.029728 GCCGTTTGATCTGAGATTGACG 59.970 50.000 14.83 14.83 0.00 4.35
248 296 3.920412 CGTTTGATCTGAGATTGACGTCA 59.080 43.478 15.76 15.76 0.00 4.35
297 345 5.698741 ATAAGTGAGTGTCCCAATCATCA 57.301 39.130 0.00 0.00 40.47 3.07
298 346 3.623906 AGTGAGTGTCCCAATCATCAG 57.376 47.619 0.00 0.00 40.47 2.90
302 350 3.776417 TGAGTGTCCCAATCATCAGATGA 59.224 43.478 15.69 15.69 44.55 2.92
311 359 6.062749 CCCAATCATCAGATGAAGATCTTGT 58.937 40.000 17.24 0.64 43.50 3.16
312 360 6.017026 CCCAATCATCAGATGAAGATCTTGTG 60.017 42.308 17.24 4.74 43.50 3.33
313 361 6.017026 CCAATCATCAGATGAAGATCTTGTGG 60.017 42.308 17.24 10.13 43.50 4.17
314 362 4.449131 TCATCAGATGAAGATCTTGTGGC 58.551 43.478 14.00 0.00 36.75 5.01
315 363 4.163649 TCATCAGATGAAGATCTTGTGGCT 59.836 41.667 14.00 1.90 36.75 4.75
335 383 4.931601 GGCTGAATTTGAATTCCCTTGAAC 59.068 41.667 12.51 0.00 43.19 3.18
343 391 3.325425 TGAATTCCCTTGAACTGGTACGA 59.675 43.478 2.27 0.00 32.13 3.43
353 401 0.108945 ACTGGTACGAGGCGCTTAAC 60.109 55.000 7.64 0.00 0.00 2.01
354 402 0.804933 CTGGTACGAGGCGCTTAACC 60.805 60.000 7.64 9.29 0.00 2.85
355 403 1.216178 GGTACGAGGCGCTTAACCA 59.784 57.895 7.64 0.00 0.00 3.67
357 405 1.648504 GTACGAGGCGCTTAACCAAT 58.351 50.000 7.64 0.00 0.00 3.16
367 415 3.425193 GCGCTTAACCAATGAAGTGTTTG 59.575 43.478 0.00 0.00 35.93 2.93
372 420 6.198966 GCTTAACCAATGAAGTGTTTGAAGTG 59.801 38.462 0.00 0.00 0.00 3.16
374 422 5.248870 ACCAATGAAGTGTTTGAAGTGTC 57.751 39.130 0.00 0.00 0.00 3.67
377 425 4.558538 ATGAAGTGTTTGAAGTGTCTGC 57.441 40.909 0.00 0.00 0.00 4.26
393 441 2.303311 GTCTGCTTCTTCAGTTAGGGGT 59.697 50.000 0.00 0.00 35.63 4.95
400 448 2.897969 TCTTCAGTTAGGGGTCTGACAC 59.102 50.000 10.38 5.69 32.58 3.67
402 450 1.968493 TCAGTTAGGGGTCTGACACAC 59.032 52.381 12.80 1.50 32.58 3.82
408 456 2.430367 GGTCTGACACACCCCCAC 59.570 66.667 10.38 0.00 0.00 4.61
424 472 1.976474 CACCCCACCCCATTTGTCG 60.976 63.158 0.00 0.00 0.00 4.35
426 474 1.677633 CCCCACCCCATTTGTCGAC 60.678 63.158 9.11 9.11 0.00 4.20
427 475 1.677633 CCCACCCCATTTGTCGACC 60.678 63.158 14.12 0.00 0.00 4.79
428 476 1.677633 CCACCCCATTTGTCGACCC 60.678 63.158 14.12 0.00 0.00 4.46
431 479 1.677633 CCCCATTTGTCGACCCACC 60.678 63.158 14.12 0.00 0.00 4.61
432 480 1.677633 CCCATTTGTCGACCCACCC 60.678 63.158 14.12 0.00 0.00 4.61
433 481 1.074072 CCATTTGTCGACCCACCCA 59.926 57.895 14.12 0.00 0.00 4.51
502 567 6.478673 TGATAGCAACAAACATACGACATAGG 59.521 38.462 0.00 0.00 0.00 2.57
506 571 7.217200 AGCAACAAACATACGACATAGGATAT 58.783 34.615 0.00 0.00 0.00 1.63
509 574 9.208022 CAACAAACATACGACATAGGATATGAT 57.792 33.333 3.87 0.00 0.00 2.45
510 575 9.778741 AACAAACATACGACATAGGATATGATT 57.221 29.630 3.87 0.00 0.00 2.57
512 577 8.659491 CAAACATACGACATAGGATATGATTGG 58.341 37.037 3.87 0.00 35.66 3.16
514 579 7.548097 ACATACGACATAGGATATGATTGGAC 58.452 38.462 3.87 0.00 0.00 4.02
561 626 8.651589 TCATCACTACTTTATACTATGAGGGG 57.348 38.462 0.00 0.00 0.00 4.79
562 627 7.674348 TCATCACTACTTTATACTATGAGGGGG 59.326 40.741 0.00 0.00 0.00 5.40
565 630 8.069356 TCACTACTTTATACTATGAGGGGGAAA 58.931 37.037 0.00 0.00 0.00 3.13
566 631 8.881262 CACTACTTTATACTATGAGGGGGAAAT 58.119 37.037 0.00 0.00 0.00 2.17
567 632 8.881262 ACTACTTTATACTATGAGGGGGAAATG 58.119 37.037 0.00 0.00 0.00 2.32
570 635 8.657712 ACTTTATACTATGAGGGGGAAATGTAC 58.342 37.037 0.00 0.00 0.00 2.90
571 636 8.808240 TTTATACTATGAGGGGGAAATGTACT 57.192 34.615 0.00 0.00 0.00 2.73
594 3960 5.622346 TTGCCTTTTCCCTTTGTATTTGT 57.378 34.783 0.00 0.00 0.00 2.83
608 3974 8.124823 CCTTTGTATTTGTCGTCGTAGTAGATA 58.875 37.037 0.00 0.00 0.00 1.98
640 4006 2.550208 GGTATGGATTGTCGATGGGGTC 60.550 54.545 0.00 0.00 0.00 4.46
649 4015 0.041238 TCGATGGGGTCAGAGGAGTT 59.959 55.000 0.00 0.00 0.00 3.01
650 4016 0.176680 CGATGGGGTCAGAGGAGTTG 59.823 60.000 0.00 0.00 0.00 3.16
666 4032 3.008485 GGAGTTGAAGGAGATGACAAGGT 59.992 47.826 0.00 0.00 0.00 3.50
672 4038 4.838423 TGAAGGAGATGACAAGGTGTAGAA 59.162 41.667 0.00 0.00 0.00 2.10
678 4044 2.412870 TGACAAGGTGTAGAATGTGCG 58.587 47.619 0.00 0.00 0.00 5.34
685 4051 0.447406 TGTAGAATGTGCGTGCATGC 59.553 50.000 24.20 24.20 0.00 4.06
686 4052 0.587242 GTAGAATGTGCGTGCATGCG 60.587 55.000 25.05 9.47 37.81 4.73
717 4083 4.142138 GGTTGAGTGTATCGAAGGAGATGT 60.142 45.833 0.00 0.00 32.39 3.06
718 4084 5.067413 GGTTGAGTGTATCGAAGGAGATGTA 59.933 44.000 0.00 0.00 32.39 2.29
722 4088 5.593010 AGTGTATCGAAGGAGATGTAAAGC 58.407 41.667 0.00 0.00 32.39 3.51
723 4089 4.441415 GTGTATCGAAGGAGATGTAAAGCG 59.559 45.833 0.00 0.00 32.39 4.68
724 4090 2.579207 TCGAAGGAGATGTAAAGCGG 57.421 50.000 0.00 0.00 0.00 5.52
727 4093 3.444742 TCGAAGGAGATGTAAAGCGGTAA 59.555 43.478 0.00 0.00 0.00 2.85
734 4100 3.435671 AGATGTAAAGCGGTAAAGTGTGC 59.564 43.478 0.00 0.00 0.00 4.57
740 4106 1.083015 CGGTAAAGTGTGCGTGCAC 60.083 57.895 17.72 17.72 46.33 4.57
757 4123 4.634004 CGTGCACATCTTTATAGGGTTGAA 59.366 41.667 18.64 0.00 0.00 2.69
764 4130 8.292448 CACATCTTTATAGGGTTGAATGTATGC 58.708 37.037 0.00 0.00 0.00 3.14
767 4133 6.929049 TCTTTATAGGGTTGAATGTATGCTCG 59.071 38.462 0.00 0.00 0.00 5.03
768 4134 4.689612 ATAGGGTTGAATGTATGCTCGT 57.310 40.909 0.00 0.00 0.00 4.18
769 4135 2.632377 AGGGTTGAATGTATGCTCGTG 58.368 47.619 0.00 0.00 0.00 4.35
770 4136 2.027192 AGGGTTGAATGTATGCTCGTGT 60.027 45.455 0.00 0.00 0.00 4.49
771 4137 2.095853 GGGTTGAATGTATGCTCGTGTG 59.904 50.000 0.00 0.00 0.00 3.82
789 4155 3.189080 GTGTGTGAGCATCTGCAATTGTA 59.811 43.478 7.40 0.89 45.16 2.41
801 4167 7.463648 GCATCTGCAATTGTATTGTGTTCAATC 60.464 37.037 7.40 0.00 41.39 2.67
885 4254 1.137086 ACGAGAGATCCGGTTCCATTG 59.863 52.381 8.95 4.86 0.00 2.82
886 4255 1.137086 CGAGAGATCCGGTTCCATTGT 59.863 52.381 8.95 0.00 0.00 2.71
887 4256 2.555199 GAGAGATCCGGTTCCATTGTG 58.445 52.381 8.95 0.00 0.00 3.33
888 4257 2.168521 GAGAGATCCGGTTCCATTGTGA 59.831 50.000 8.95 0.00 0.00 3.58
889 4258 2.169352 AGAGATCCGGTTCCATTGTGAG 59.831 50.000 8.95 0.00 0.00 3.51
928 4299 1.079405 TTTCGTGCCCGTCTCATCC 60.079 57.895 0.00 0.00 35.01 3.51
966 4337 3.071479 CCAGCCACGTTAACTTACATGT 58.929 45.455 2.69 2.69 0.00 3.21
1146 4527 0.031585 GGGACAAAAGCGGAAACCAC 59.968 55.000 0.00 0.00 0.00 4.16
1362 4745 4.095185 TGTTAGTTGTGTCCAAAGTTTCCG 59.905 41.667 0.00 0.00 30.94 4.30
1629 5014 6.473455 GTGTTTCTTGTTTGATTCTTGTGAGG 59.527 38.462 0.00 0.00 0.00 3.86
1634 5019 2.099141 TTGATTCTTGTGAGGAGCGG 57.901 50.000 0.00 0.00 0.00 5.52
1647 5032 3.500680 TGAGGAGCGGTTGAAATTAACAC 59.499 43.478 0.00 0.00 32.22 3.32
1681 5066 0.473117 AGTCTCCTCGGGGGTGAAAA 60.473 55.000 0.00 0.00 39.03 2.29
1708 5093 8.150296 CCTTAACTGGGAACAAAAATTTGATCT 58.850 33.333 12.54 0.00 42.06 2.75
1710 5095 5.299949 ACTGGGAACAAAAATTTGATCTGC 58.700 37.500 12.54 2.59 42.06 4.26
1724 5109 8.757982 AATTTGATCTGCTTTATATGACCTGT 57.242 30.769 0.00 0.00 0.00 4.00
2040 5622 8.755696 TCATTTAAACCTACATGAATTGCAAC 57.244 30.769 0.00 0.00 0.00 4.17
2076 5659 8.267183 AGATTTTGTTGGGAAACATCTTTTCTT 58.733 29.630 0.00 0.00 32.01 2.52
2089 5672 7.109006 ACATCTTTTCTTTTTAAAGCATGCG 57.891 32.000 13.01 0.00 35.99 4.73
2106 5689 7.363205 AGCATGCGCATTTTAACTTTTTATT 57.637 28.000 22.81 0.00 42.27 1.40
2163 5761 5.582689 TCATCACGTGAATGATCTGTACT 57.417 39.130 24.13 0.00 37.20 2.73
2164 5762 5.343249 TCATCACGTGAATGATCTGTACTG 58.657 41.667 24.13 11.49 37.20 2.74
2165 5763 5.125417 TCATCACGTGAATGATCTGTACTGA 59.875 40.000 24.13 13.72 37.20 3.41
2166 5764 5.385509 TCACGTGAATGATCTGTACTGAA 57.614 39.130 17.62 0.00 0.00 3.02
2167 5765 5.161358 TCACGTGAATGATCTGTACTGAAC 58.839 41.667 17.62 4.87 0.00 3.18
2168 5766 5.048013 TCACGTGAATGATCTGTACTGAACT 60.048 40.000 17.62 0.00 0.00 3.01
2169 5767 6.150474 TCACGTGAATGATCTGTACTGAACTA 59.850 38.462 17.62 0.00 0.00 2.24
2264 5862 9.650714 ATTTGGCATAGGCATCAATACATATAT 57.349 29.630 0.15 0.00 43.71 0.86
2328 5926 4.670735 GCATTTGACCAATTTTCTGCATGC 60.671 41.667 11.82 11.82 0.00 4.06
2490 6088 5.806654 ATTAAACCCAAATGCACAGACTT 57.193 34.783 0.00 0.00 0.00 3.01
2516 6114 7.814587 TCAGAGACATATAAAATGTGCCTATCG 59.185 37.037 0.00 0.00 31.52 2.92
2542 6140 6.765915 TTGCCAGTATGTATGCATTGTTAA 57.234 33.333 3.54 0.00 36.58 2.01
2543 6141 6.130298 TGCCAGTATGTATGCATTGTTAAC 57.870 37.500 3.54 0.00 36.58 2.01
2582 6182 5.991933 TGGCAAGTTTTATATTTGCAGGA 57.008 34.783 10.40 0.00 46.74 3.86
2670 6273 1.454572 TTGTGCTGAATGCTTGGCGT 61.455 50.000 0.00 0.00 43.37 5.68
2854 6458 2.838736 ACATGTGTGGTGTCAAGACTC 58.161 47.619 0.00 0.00 0.00 3.36
2865 6469 3.988517 GTGTCAAGACTCGGGAGTAAAAG 59.011 47.826 0.48 0.00 42.66 2.27
2873 6477 7.001099 AGACTCGGGAGTAAAAGTAAAATGA 57.999 36.000 0.48 0.00 42.66 2.57
2949 6554 8.102676 TCATCTATTCTCATCTGTTTGGTTTGA 58.897 33.333 0.00 0.00 0.00 2.69
3031 6639 8.087750 TGGAATCTGATAAATGTTTGTTGAACC 58.912 33.333 0.00 0.00 37.45 3.62
3077 6685 7.879070 ACAATTCATGCACTGCTTATATTAGG 58.121 34.615 1.98 0.00 0.00 2.69
3191 6802 9.178758 GATCAATTTGATTCTACTTAGGGTTGT 57.821 33.333 12.96 0.00 37.20 3.32
3263 6876 5.047519 GGAGTCCTACACTGCTTGTAAGTTA 60.048 44.000 0.41 0.00 40.33 2.24
3371 6986 4.891992 TGGAAAGAAAGTACTCCCTCTG 57.108 45.455 0.00 0.00 0.00 3.35
3372 6987 4.232091 TGGAAAGAAAGTACTCCCTCTGT 58.768 43.478 0.00 0.00 0.00 3.41
3373 6988 5.399991 TGGAAAGAAAGTACTCCCTCTGTA 58.600 41.667 0.00 0.00 0.00 2.74
3375 6990 6.328148 TGGAAAGAAAGTACTCCCTCTGTAAA 59.672 38.462 0.00 0.00 0.00 2.01
3376 6991 6.874664 GGAAAGAAAGTACTCCCTCTGTAAAG 59.125 42.308 0.00 0.00 0.00 1.85
3377 6992 7.256225 GGAAAGAAAGTACTCCCTCTGTAAAGA 60.256 40.741 0.00 0.00 0.00 2.52
3379 6994 7.613551 AGAAAGTACTCCCTCTGTAAAGAAA 57.386 36.000 0.00 0.00 0.00 2.52
3381 6996 9.322769 AGAAAGTACTCCCTCTGTAAAGAAATA 57.677 33.333 0.00 0.00 0.00 1.40
3388 7003 9.495382 ACTCCCTCTGTAAAGAAATATAAGAGT 57.505 33.333 0.00 0.00 0.00 3.24
3389 7004 9.757227 CTCCCTCTGTAAAGAAATATAAGAGTG 57.243 37.037 0.00 0.00 0.00 3.51
3390 7005 9.268282 TCCCTCTGTAAAGAAATATAAGAGTGT 57.732 33.333 0.00 0.00 0.00 3.55
3391 7006 9.892130 CCCTCTGTAAAGAAATATAAGAGTGTT 57.108 33.333 0.00 0.00 0.00 3.32
3419 7034 7.535489 ATCACTATTTTAGTGGTCTAAACGC 57.465 36.000 13.21 0.00 46.78 4.84
3420 7035 7.328737 ATCACTATTTTAGTGGTCTAAACGCT 58.671 34.615 13.21 0.00 46.78 5.07
3421 7036 7.491696 ATCACTATTTTAGTGGTCTAAACGCTC 59.508 37.037 13.21 0.00 46.78 5.03
3423 7038 7.384477 ACTATTTTAGTGGTCTAAACGCTCTT 58.616 34.615 0.74 0.00 43.20 2.85
3425 7040 9.530633 CTATTTTAGTGGTCTAAACGCTCTTAT 57.469 33.333 0.74 0.00 43.20 1.73
3428 7043 9.880157 TTTTAGTGGTCTAAACGCTCTTATATT 57.120 29.630 0.74 0.00 43.20 1.28
3429 7044 9.880157 TTTAGTGGTCTAAACGCTCTTATATTT 57.120 29.630 0.00 0.00 40.05 1.40
3430 7045 7.772332 AGTGGTCTAAACGCTCTTATATTTG 57.228 36.000 0.00 0.00 0.00 2.32
3431 7046 7.328737 AGTGGTCTAAACGCTCTTATATTTGT 58.671 34.615 0.00 0.00 0.00 2.83
3433 7048 8.448615 GTGGTCTAAACGCTCTTATATTTGTTT 58.551 33.333 0.00 0.00 34.32 2.83
3434 7049 9.656040 TGGTCTAAACGCTCTTATATTTGTTTA 57.344 29.630 0.00 0.00 32.41 2.01
3435 7050 9.911980 GGTCTAAACGCTCTTATATTTGTTTAC 57.088 33.333 0.00 0.00 32.41 2.01
3436 7051 9.615779 GTCTAAACGCTCTTATATTTGTTTACG 57.384 33.333 0.00 0.00 32.41 3.18
3440 7055 5.751990 ACGCTCTTATATTTGTTTACGGAGG 59.248 40.000 0.00 0.00 0.00 4.30
3441 7056 5.176958 CGCTCTTATATTTGTTTACGGAGGG 59.823 44.000 0.00 0.00 0.00 4.30
3544 7463 1.177401 GGGCCTTCATTGAAGACACC 58.823 55.000 24.71 20.72 41.71 4.16
3659 7578 5.163713 GCTGTGTAAGATCATCAGTTTTCCC 60.164 44.000 0.00 0.00 0.00 3.97
3660 7579 5.875224 TGTGTAAGATCATCAGTTTTCCCA 58.125 37.500 0.00 0.00 0.00 4.37
3683 7602 4.750941 AGGAAAAAGAACCCAATCCATCA 58.249 39.130 0.00 0.00 0.00 3.07
3709 7628 3.552890 GCAAGGTTCCCAGTTTGAATCAC 60.553 47.826 0.00 0.00 0.00 3.06
3747 7666 5.443261 CAGTTCTACAACGTAACGTCTACA 58.557 41.667 0.00 0.00 39.99 2.74
3760 7679 1.270550 CGTCTACAACCACGGGTACTT 59.729 52.381 0.00 0.00 33.12 2.24
3807 7726 4.142491 ACAACAACAATCAAGAAGCGTTCA 60.142 37.500 1.58 0.00 0.00 3.18
3868 7787 3.192212 CCTGAGAACAAAGAAGAATGGGC 59.808 47.826 0.00 0.00 0.00 5.36
3870 7789 3.181429 TGAGAACAAAGAAGAATGGGCCT 60.181 43.478 4.53 0.00 0.00 5.19
3908 7827 1.777272 ACTGGAAGCCCCATATTCCTC 59.223 52.381 5.63 0.00 45.57 3.71
3913 7832 2.829384 GCCCCATATTCCTCGGCCA 61.829 63.158 2.24 0.00 33.30 5.36
3916 7835 1.633432 CCCCATATTCCTCGGCCAATA 59.367 52.381 2.24 0.00 0.00 1.90
3918 7837 2.039746 CCCATATTCCTCGGCCAATACA 59.960 50.000 2.24 0.00 0.00 2.29
3920 7839 4.141287 CCATATTCCTCGGCCAATACAAA 58.859 43.478 2.24 0.00 0.00 2.83
3921 7840 4.216257 CCATATTCCTCGGCCAATACAAAG 59.784 45.833 2.24 0.00 0.00 2.77
3927 7846 1.349688 TCGGCCAATACAAAGGAGTGT 59.650 47.619 2.24 0.00 35.43 3.55
3938 7857 0.038744 AAGGAGTGTTGGCCATGAGG 59.961 55.000 6.09 0.00 38.23 3.86
4128 8047 1.648116 AACCTTACCTTACCGCCAGA 58.352 50.000 0.00 0.00 0.00 3.86
4144 8063 2.113860 CAGATTACTGGTGGTGGTGG 57.886 55.000 0.00 0.00 40.14 4.61
4185 8104 7.823745 ACTGACTTTTGATTTACATGGTTCT 57.176 32.000 0.00 0.00 0.00 3.01
4200 8167 6.058183 ACATGGTTCTAATGATCCAGCTTAC 58.942 40.000 0.00 0.00 43.08 2.34
4212 8179 1.986378 CCAGCTTACGACGAACTCAAG 59.014 52.381 0.00 0.00 0.00 3.02
4236 8203 1.831736 ACTTCCAATGTACTCCCTCCG 59.168 52.381 0.00 0.00 0.00 4.63
4241 8208 2.027561 CCAATGTACTCCCTCCGTTTCA 60.028 50.000 0.00 0.00 0.00 2.69
4249 8216 4.576879 ACTCCCTCCGTTTCATTTTACTC 58.423 43.478 0.00 0.00 0.00 2.59
4259 8226 8.826710 TCCGTTTCATTTTACTCTGCATATTAG 58.173 33.333 0.00 0.00 0.00 1.73
4275 8242 8.523915 TGCATATTAGATTTGTCTGTCCAAAT 57.476 30.769 7.44 7.44 45.29 2.32
4428 10792 5.812642 TCAAAGAGTTTGACTTCTGACAGAC 59.187 40.000 4.15 0.00 44.21 3.51
4456 10820 3.396260 AAGAAACGAAGACAATCCCGA 57.604 42.857 0.00 0.00 0.00 5.14
4463 10827 2.417379 CGAAGACAATCCCGAGTGACAT 60.417 50.000 0.00 0.00 0.00 3.06
4465 10829 3.802948 AGACAATCCCGAGTGACATAC 57.197 47.619 0.00 0.00 0.00 2.39
4467 10831 3.513912 AGACAATCCCGAGTGACATACAA 59.486 43.478 0.00 0.00 0.00 2.41
4469 10833 4.843728 ACAATCCCGAGTGACATACAAAT 58.156 39.130 0.00 0.00 0.00 2.32
4470 10834 5.253330 ACAATCCCGAGTGACATACAAATT 58.747 37.500 0.00 0.00 0.00 1.82
4471 10835 5.354234 ACAATCCCGAGTGACATACAAATTC 59.646 40.000 0.00 0.00 0.00 2.17
4514 10880 3.190079 TGAATCGAAGATCCGAAGCTTG 58.810 45.455 2.10 0.00 45.12 4.01
4518 10884 2.166459 TCGAAGATCCGAAGCTTGTGAT 59.834 45.455 2.10 5.24 35.42 3.06
4523 10889 3.686726 AGATCCGAAGCTTGTGATTTCAC 59.313 43.478 2.10 3.72 46.59 3.18
4552 10918 1.421410 CGCAGACGGCAACATCCTAC 61.421 60.000 0.00 0.00 45.17 3.18
4553 10919 1.090052 GCAGACGGCAACATCCTACC 61.090 60.000 0.00 0.00 43.97 3.18
4556 10922 2.897207 CGGCAACATCCTACCGGA 59.103 61.111 9.46 0.00 45.16 5.14
4564 10930 2.288992 TCCTACCGGATGGCCCAT 59.711 61.111 9.46 0.00 39.70 4.00
4569 10936 3.208005 TCCTACCGGATGGCCCATATATA 59.792 47.826 9.46 0.00 39.70 0.86
4577 10944 4.447762 GGATGGCCCATATATAATCCACCC 60.448 50.000 0.00 0.00 34.87 4.61
4585 10952 5.391523 CCATATATAATCCACCCAAAACGCG 60.392 44.000 3.53 3.53 0.00 6.01
4587 10954 0.875728 TAATCCACCCAAAACGCGTG 59.124 50.000 14.98 1.17 0.00 5.34
4589 10956 2.969300 ATCCACCCAAAACGCGTGGT 62.969 55.000 14.98 13.66 45.97 4.16
4590 10957 2.330041 CACCCAAAACGCGTGGTC 59.670 61.111 14.98 0.00 34.01 4.02
4591 10958 2.124653 ACCCAAAACGCGTGGTCA 60.125 55.556 14.98 0.00 34.01 4.02
4592 10959 1.527380 ACCCAAAACGCGTGGTCAT 60.527 52.632 14.98 0.00 34.01 3.06
4593 10960 1.081509 CCCAAAACGCGTGGTCATG 60.082 57.895 14.98 7.77 34.01 3.07
4594 10961 1.511318 CCCAAAACGCGTGGTCATGA 61.511 55.000 14.98 0.00 34.01 3.07
4595 10962 0.521291 CCAAAACGCGTGGTCATGAT 59.479 50.000 14.98 0.00 0.00 2.45
4596 10963 1.068610 CCAAAACGCGTGGTCATGATT 60.069 47.619 14.98 0.00 0.00 2.57
4597 10964 2.606795 CCAAAACGCGTGGTCATGATTT 60.607 45.455 14.98 3.61 0.00 2.17
4598 10965 3.365465 CCAAAACGCGTGGTCATGATTTA 60.365 43.478 14.98 0.00 0.00 1.40
4599 10966 3.740044 AAACGCGTGGTCATGATTTAG 57.260 42.857 14.98 0.00 0.00 1.85
4614 10981 8.778358 GTCATGATTTAGTGACCCAATCTTATC 58.222 37.037 0.00 0.00 38.98 1.75
4633 11000 2.170166 TCTGGTCATGATTTTGCCACC 58.830 47.619 0.00 0.00 0.00 4.61
4642 11009 0.391228 ATTTTGCCACCCAACCGAAC 59.609 50.000 0.00 0.00 31.97 3.95
4643 11010 2.005960 TTTTGCCACCCAACCGAACG 62.006 55.000 0.00 0.00 31.97 3.95
4653 11020 1.454295 AACCGAACGGGGCAAACTT 60.454 52.632 17.44 0.00 41.60 2.66
4663 11030 2.931246 GGCAAACTTGGCCCAAATG 58.069 52.632 0.00 0.00 46.85 2.32
4664 11031 1.236616 GGCAAACTTGGCCCAAATGC 61.237 55.000 16.23 16.23 46.85 3.56
4674 11041 2.124320 CCAAATGCCCGGACGGAT 60.124 61.111 13.13 0.00 37.50 4.18
4676 11043 1.451207 CAAATGCCCGGACGGATCA 60.451 57.895 13.13 9.97 37.50 2.92
4695 11062 2.241176 TCAGTAATCCCCATGTCCAACC 59.759 50.000 0.00 0.00 0.00 3.77
4696 11063 1.569072 AGTAATCCCCATGTCCAACCC 59.431 52.381 0.00 0.00 0.00 4.11
4702 11069 0.971959 CCCATGTCCAACCCCACATG 60.972 60.000 5.26 5.26 46.46 3.21
4705 11072 0.323725 ATGTCCAACCCCACATGAGC 60.324 55.000 0.00 0.00 31.80 4.26
4706 11073 2.040544 GTCCAACCCCACATGAGCG 61.041 63.158 0.00 0.00 0.00 5.03
4707 11074 3.443045 CCAACCCCACATGAGCGC 61.443 66.667 0.00 0.00 0.00 5.92
4708 11075 3.443045 CAACCCCACATGAGCGCC 61.443 66.667 2.29 0.00 0.00 6.53
4709 11076 3.650950 AACCCCACATGAGCGCCT 61.651 61.111 2.29 0.00 0.00 5.52
4710 11077 3.925630 AACCCCACATGAGCGCCTG 62.926 63.158 2.29 1.55 0.00 4.85
4711 11078 4.100084 CCCCACATGAGCGCCTGA 62.100 66.667 2.29 0.00 0.00 3.86
4712 11079 2.046023 CCCACATGAGCGCCTGAA 60.046 61.111 2.29 0.00 0.00 3.02
4713 11080 1.452651 CCCACATGAGCGCCTGAAT 60.453 57.895 2.29 0.00 0.00 2.57
4714 11081 1.721664 CCCACATGAGCGCCTGAATG 61.722 60.000 2.29 5.69 0.00 2.67
4715 11082 1.063649 CACATGAGCGCCTGAATGC 59.936 57.895 2.29 0.00 0.00 3.56
4723 11090 2.747460 GCCTGAATGCGCCTGACA 60.747 61.111 4.18 0.00 0.00 3.58
4724 11091 3.044059 GCCTGAATGCGCCTGACAC 62.044 63.158 4.18 0.00 0.00 3.67
4725 11092 2.743752 CCTGAATGCGCCTGACACG 61.744 63.158 4.18 0.00 0.00 4.49
4726 11093 2.029288 CTGAATGCGCCTGACACGT 61.029 57.895 4.18 0.00 0.00 4.49
4727 11094 1.959899 CTGAATGCGCCTGACACGTC 61.960 60.000 4.18 0.00 0.00 4.34
4728 11095 3.071459 GAATGCGCCTGACACGTCG 62.071 63.158 4.18 0.00 0.00 5.12
4732 11099 4.039357 CGCCTGACACGTCGGACT 62.039 66.667 7.60 0.00 38.21 3.85
4733 11100 2.430921 GCCTGACACGTCGGACTG 60.431 66.667 7.60 6.34 38.21 3.51
4734 11101 2.916052 GCCTGACACGTCGGACTGA 61.916 63.158 7.60 0.00 38.21 3.41
4735 11102 1.883732 CCTGACACGTCGGACTGAT 59.116 57.895 7.60 0.00 38.21 2.90
4736 11103 1.092348 CCTGACACGTCGGACTGATA 58.908 55.000 7.60 0.00 38.21 2.15
4737 11104 1.064208 CCTGACACGTCGGACTGATAG 59.936 57.143 7.60 7.41 38.21 2.08
4738 11105 0.450583 TGACACGTCGGACTGATAGC 59.549 55.000 6.57 0.00 0.00 2.97
4739 11106 0.450583 GACACGTCGGACTGATAGCA 59.549 55.000 6.57 0.00 0.00 3.49
4740 11107 1.065701 GACACGTCGGACTGATAGCAT 59.934 52.381 6.57 0.00 0.00 3.79
4741 11108 2.289820 GACACGTCGGACTGATAGCATA 59.710 50.000 6.57 0.00 0.00 3.14
4742 11109 2.290916 ACACGTCGGACTGATAGCATAG 59.709 50.000 6.57 0.00 0.00 2.23
4743 11110 2.548480 CACGTCGGACTGATAGCATAGA 59.452 50.000 6.57 0.00 0.00 1.98
4744 11111 2.548904 ACGTCGGACTGATAGCATAGAC 59.451 50.000 6.57 0.00 0.00 2.59
4745 11112 2.095668 CGTCGGACTGATAGCATAGACC 60.096 54.545 6.57 0.00 0.00 3.85
4746 11113 2.229302 GTCGGACTGATAGCATAGACCC 59.771 54.545 0.00 0.00 0.00 4.46
4747 11114 2.158519 TCGGACTGATAGCATAGACCCA 60.159 50.000 0.00 0.00 0.00 4.51
4748 11115 2.828520 CGGACTGATAGCATAGACCCAT 59.171 50.000 0.00 0.00 0.00 4.00
4749 11116 3.367806 CGGACTGATAGCATAGACCCATG 60.368 52.174 0.00 0.00 0.00 3.66
4759 11126 4.311816 CATAGACCCATGCAAAATGACC 57.688 45.455 0.00 0.00 0.00 4.02
4760 11127 2.307496 AGACCCATGCAAAATGACCA 57.693 45.000 0.00 0.00 0.00 4.02
4761 11128 2.173519 AGACCCATGCAAAATGACCAG 58.826 47.619 0.00 0.00 0.00 4.00
4762 11129 1.205417 GACCCATGCAAAATGACCAGG 59.795 52.381 0.00 0.00 0.00 4.45
4763 11130 0.108041 CCCATGCAAAATGACCAGGC 60.108 55.000 0.00 0.00 0.00 4.85
4764 11131 0.899720 CCATGCAAAATGACCAGGCT 59.100 50.000 0.00 0.00 0.00 4.58
4765 11132 1.404986 CCATGCAAAATGACCAGGCTG 60.405 52.381 7.75 7.75 0.00 4.85
4766 11133 1.546923 CATGCAAAATGACCAGGCTGA 59.453 47.619 17.94 0.00 0.00 4.26
4767 11134 0.961019 TGCAAAATGACCAGGCTGAC 59.039 50.000 17.94 10.29 0.00 3.51
4768 11135 0.244721 GCAAAATGACCAGGCTGACC 59.755 55.000 17.94 7.62 0.00 4.02
4769 11136 0.523072 CAAAATGACCAGGCTGACCG 59.477 55.000 17.94 1.26 42.76 4.79
4770 11137 0.609131 AAAATGACCAGGCTGACCGG 60.609 55.000 17.94 0.00 42.76 5.28
4771 11138 1.779061 AAATGACCAGGCTGACCGGT 61.779 55.000 17.94 6.92 42.95 5.28
4772 11139 0.907704 AATGACCAGGCTGACCGGTA 60.908 55.000 17.94 0.00 41.17 4.02
4773 11140 0.907704 ATGACCAGGCTGACCGGTAA 60.908 55.000 17.94 0.00 41.17 2.85
4774 11141 0.907704 TGACCAGGCTGACCGGTAAT 60.908 55.000 17.94 0.00 41.17 1.89
4775 11142 0.179081 GACCAGGCTGACCGGTAATC 60.179 60.000 17.94 0.00 41.17 1.75
4776 11143 1.146263 CCAGGCTGACCGGTAATCC 59.854 63.158 17.94 5.02 42.76 3.01
4777 11144 1.338136 CCAGGCTGACCGGTAATCCT 61.338 60.000 17.94 8.70 42.76 3.24
4778 11145 0.105039 CAGGCTGACCGGTAATCCTC 59.895 60.000 11.76 0.00 42.76 3.71
4779 11146 1.049289 AGGCTGACCGGTAATCCTCC 61.049 60.000 8.70 4.28 42.76 4.30
4780 11147 1.067582 GCTGACCGGTAATCCTCCG 59.932 63.158 7.34 0.00 46.49 4.63
4786 11153 3.588277 CGGTAATCCTCCGGATGTG 57.412 57.895 3.57 0.00 42.27 3.21
4787 11154 0.600255 CGGTAATCCTCCGGATGTGC 60.600 60.000 3.57 0.00 42.27 4.57
4788 11155 0.250338 GGTAATCCTCCGGATGTGCC 60.250 60.000 3.57 0.00 42.27 5.01
4789 11156 0.468226 GTAATCCTCCGGATGTGCCA 59.532 55.000 3.57 0.00 42.27 4.92
4790 11157 0.758734 TAATCCTCCGGATGTGCCAG 59.241 55.000 3.57 0.00 42.27 4.85
4791 11158 0.982852 AATCCTCCGGATGTGCCAGA 60.983 55.000 3.57 0.00 42.27 3.86
4792 11159 1.690219 ATCCTCCGGATGTGCCAGAC 61.690 60.000 3.57 0.00 41.43 3.51
4793 11160 2.659063 CCTCCGGATGTGCCAGACA 61.659 63.158 3.57 0.00 39.53 3.41
4801 11168 3.712881 GTGCCAGACACGCCGAAC 61.713 66.667 0.00 0.00 40.07 3.95
4802 11169 3.923864 TGCCAGACACGCCGAACT 61.924 61.111 0.00 0.00 0.00 3.01
4803 11170 3.414700 GCCAGACACGCCGAACTG 61.415 66.667 0.00 0.00 0.00 3.16
4804 11171 2.338620 CCAGACACGCCGAACTGA 59.661 61.111 0.00 0.00 32.90 3.41
4805 11172 2.022129 CCAGACACGCCGAACTGAC 61.022 63.158 0.00 0.00 32.90 3.51
4806 11173 2.022129 CAGACACGCCGAACTGACC 61.022 63.158 0.00 0.00 32.90 4.02
4807 11174 2.028484 GACACGCCGAACTGACCA 59.972 61.111 0.00 0.00 0.00 4.02
4808 11175 2.279918 ACACGCCGAACTGACCAC 60.280 61.111 0.00 0.00 0.00 4.16
4809 11176 2.279851 CACGCCGAACTGACCACA 60.280 61.111 0.00 0.00 0.00 4.17
4810 11177 1.667830 CACGCCGAACTGACCACAT 60.668 57.895 0.00 0.00 0.00 3.21
4811 11178 0.389296 CACGCCGAACTGACCACATA 60.389 55.000 0.00 0.00 0.00 2.29
4812 11179 0.108804 ACGCCGAACTGACCACATAG 60.109 55.000 0.00 0.00 0.00 2.23
4813 11180 0.172578 CGCCGAACTGACCACATAGA 59.827 55.000 0.00 0.00 0.00 1.98
4814 11181 1.641577 GCCGAACTGACCACATAGAC 58.358 55.000 0.00 0.00 0.00 2.59
4815 11182 1.739371 GCCGAACTGACCACATAGACC 60.739 57.143 0.00 0.00 0.00 3.85
4816 11183 1.134788 CCGAACTGACCACATAGACCC 60.135 57.143 0.00 0.00 0.00 4.46
4817 11184 1.548719 CGAACTGACCACATAGACCCA 59.451 52.381 0.00 0.00 0.00 4.51
4818 11185 2.674177 CGAACTGACCACATAGACCCAC 60.674 54.545 0.00 0.00 0.00 4.61
4819 11186 0.895530 ACTGACCACATAGACCCACG 59.104 55.000 0.00 0.00 0.00 4.94
4820 11187 0.460284 CTGACCACATAGACCCACGC 60.460 60.000 0.00 0.00 0.00 5.34
4821 11188 1.188871 TGACCACATAGACCCACGCA 61.189 55.000 0.00 0.00 0.00 5.24
4822 11189 0.460284 GACCACATAGACCCACGCAG 60.460 60.000 0.00 0.00 0.00 5.18
4823 11190 0.902984 ACCACATAGACCCACGCAGA 60.903 55.000 0.00 0.00 0.00 4.26
4824 11191 0.249120 CCACATAGACCCACGCAGAA 59.751 55.000 0.00 0.00 0.00 3.02
4825 11192 1.338674 CCACATAGACCCACGCAGAAA 60.339 52.381 0.00 0.00 0.00 2.52
4826 11193 1.732259 CACATAGACCCACGCAGAAAC 59.268 52.381 0.00 0.00 0.00 2.78
4827 11194 1.338769 ACATAGACCCACGCAGAAACC 60.339 52.381 0.00 0.00 0.00 3.27
4828 11195 0.252197 ATAGACCCACGCAGAAACCC 59.748 55.000 0.00 0.00 0.00 4.11
4829 11196 1.122632 TAGACCCACGCAGAAACCCA 61.123 55.000 0.00 0.00 0.00 4.51
4830 11197 1.303317 GACCCACGCAGAAACCCAT 60.303 57.895 0.00 0.00 0.00 4.00
4831 11198 1.303317 ACCCACGCAGAAACCCATC 60.303 57.895 0.00 0.00 0.00 3.51
4832 11199 1.303236 CCCACGCAGAAACCCATCA 60.303 57.895 0.00 0.00 0.00 3.07
4833 11200 1.308069 CCCACGCAGAAACCCATCAG 61.308 60.000 0.00 0.00 0.00 2.90
4834 11201 0.606401 CCACGCAGAAACCCATCAGT 60.606 55.000 0.00 0.00 0.00 3.41
4835 11202 1.238439 CACGCAGAAACCCATCAGTT 58.762 50.000 0.00 0.00 0.00 3.16
4839 11206 1.734465 GCAGAAACCCATCAGTTCGAG 59.266 52.381 0.00 0.00 0.00 4.04
4841 11208 3.664107 CAGAAACCCATCAGTTCGAGAA 58.336 45.455 0.00 0.00 0.00 2.87
4848 11215 0.179124 ATCAGTTCGAGAAGCGCCTC 60.179 55.000 2.29 0.00 40.61 4.70
4875 11242 4.457603 TGTTTTTCGGTGAGGGTATTCATG 59.542 41.667 0.00 0.00 0.00 3.07
4876 11243 4.561500 TTTTCGGTGAGGGTATTCATGA 57.438 40.909 0.00 0.00 0.00 3.07
4879 11246 2.368548 TCGGTGAGGGTATTCATGATGG 59.631 50.000 0.00 0.00 0.00 3.51
4880 11247 2.104792 CGGTGAGGGTATTCATGATGGT 59.895 50.000 0.00 0.00 0.00 3.55
4882 11249 3.117888 GGTGAGGGTATTCATGATGGTGT 60.118 47.826 0.00 0.00 0.00 4.16
4883 11250 4.102524 GGTGAGGGTATTCATGATGGTGTA 59.897 45.833 0.00 0.00 0.00 2.90
4894 11261 1.134128 TGATGGTGTATCATGCCGCTT 60.134 47.619 0.00 0.00 40.82 4.68
4928 11295 0.044855 AGGGACCCAAGTCTGGCTAT 59.955 55.000 14.60 0.00 43.05 2.97
4934 11301 3.628032 GACCCAAGTCTGGCTATTTAAGC 59.372 47.826 0.00 0.00 44.29 3.09
4947 11314 3.950794 TTAAGCTGGACGGCGGCAG 62.951 63.158 17.61 11.66 37.29 4.85
4961 11328 3.561241 GCAGCCCTACCCTAGCCC 61.561 72.222 0.00 0.00 0.00 5.19
4966 11333 2.607602 CCTACCCTAGCCCGTCCT 59.392 66.667 0.00 0.00 0.00 3.85
4975 11342 2.555199 CTAGCCCGTCCTCATTTCTTG 58.445 52.381 0.00 0.00 0.00 3.02
4976 11343 0.678048 AGCCCGTCCTCATTTCTTGC 60.678 55.000 0.00 0.00 0.00 4.01
4983 11350 2.026822 GTCCTCATTTCTTGCCTCTCCA 60.027 50.000 0.00 0.00 0.00 3.86
4990 11357 0.692419 TCTTGCCTCTCCATCCCCTC 60.692 60.000 0.00 0.00 0.00 4.30
4994 11361 3.237741 CTCTCCATCCCCTCCGCC 61.238 72.222 0.00 0.00 0.00 6.13
5013 11380 0.532862 CGCCGCCACATTCTAATCCT 60.533 55.000 0.00 0.00 0.00 3.24
5020 11387 1.140852 CACATTCTAATCCTCCCGCCA 59.859 52.381 0.00 0.00 0.00 5.69
5021 11388 1.141053 ACATTCTAATCCTCCCGCCAC 59.859 52.381 0.00 0.00 0.00 5.01
5029 11396 1.837051 CCTCCCGCCACTAGCCATA 60.837 63.158 0.00 0.00 38.78 2.74
5031 11398 2.100879 CTCCCGCCACTAGCCATACC 62.101 65.000 0.00 0.00 38.78 2.73
5037 11404 0.674534 CCACTAGCCATACCGAGGTC 59.325 60.000 0.00 0.00 0.00 3.85
5038 11405 1.693627 CACTAGCCATACCGAGGTCT 58.306 55.000 0.00 0.00 0.00 3.85
5041 11408 1.883275 CTAGCCATACCGAGGTCTCAG 59.117 57.143 0.00 0.00 0.00 3.35
5044 11411 1.689273 GCCATACCGAGGTCTCAGATT 59.311 52.381 0.00 0.00 0.00 2.40
5045 11412 2.891580 GCCATACCGAGGTCTCAGATTA 59.108 50.000 0.00 0.00 0.00 1.75
5046 11413 3.305471 GCCATACCGAGGTCTCAGATTAC 60.305 52.174 0.00 0.00 0.00 1.89
5047 11414 3.058155 CCATACCGAGGTCTCAGATTACG 60.058 52.174 0.00 0.00 0.00 3.18
5048 11415 2.414994 ACCGAGGTCTCAGATTACGA 57.585 50.000 0.00 0.00 0.00 3.43
5049 11416 2.933573 ACCGAGGTCTCAGATTACGAT 58.066 47.619 0.00 0.00 0.00 3.73
5050 11417 4.082665 ACCGAGGTCTCAGATTACGATA 57.917 45.455 0.00 0.00 0.00 2.92
5051 11418 4.653868 ACCGAGGTCTCAGATTACGATAT 58.346 43.478 0.00 0.00 0.00 1.63
5052 11419 5.802465 ACCGAGGTCTCAGATTACGATATA 58.198 41.667 0.00 0.00 0.00 0.86
5059 11426 6.323266 GTCTCAGATTACGATATACGCCATT 58.677 40.000 0.00 0.00 46.94 3.16
5064 11431 6.975197 CAGATTACGATATACGCCATTCTCAT 59.025 38.462 0.00 0.00 46.94 2.90
5067 11434 2.604914 CGATATACGCCATTCTCATGCC 59.395 50.000 0.00 0.00 34.51 4.40
5072 11439 1.153086 GCCATTCTCATGCCGGAGT 60.153 57.895 5.05 0.00 36.30 3.85
5149 11516 3.204827 CTGCCTCCAATTCGCCGG 61.205 66.667 0.00 0.00 0.00 6.13
5172 11539 1.317613 CAGAGTCGGATGAGGAGGAG 58.682 60.000 0.00 0.00 0.00 3.69
5177 11544 2.828145 GGATGAGGAGGAGCAGGC 59.172 66.667 0.00 0.00 0.00 4.85
5178 11545 2.068821 GGATGAGGAGGAGCAGGCA 61.069 63.158 0.00 0.00 0.00 4.75
5185 11552 1.381056 GAGGAGCAGGCAGAGGAGA 60.381 63.158 0.00 0.00 0.00 3.71
5186 11553 0.975040 GAGGAGCAGGCAGAGGAGAA 60.975 60.000 0.00 0.00 0.00 2.87
5187 11554 1.220477 GGAGCAGGCAGAGGAGAAC 59.780 63.158 0.00 0.00 0.00 3.01
5188 11555 1.153667 GAGCAGGCAGAGGAGAACG 60.154 63.158 0.00 0.00 0.00 3.95
5189 11556 1.882989 GAGCAGGCAGAGGAGAACGT 61.883 60.000 0.00 0.00 0.00 3.99
5190 11557 1.739562 GCAGGCAGAGGAGAACGTG 60.740 63.158 0.00 0.00 0.00 4.49
5191 11558 1.967535 CAGGCAGAGGAGAACGTGA 59.032 57.895 0.00 0.00 0.00 4.35
5192 11559 0.318441 CAGGCAGAGGAGAACGTGAA 59.682 55.000 0.00 0.00 0.00 3.18
5193 11560 1.066573 CAGGCAGAGGAGAACGTGAAT 60.067 52.381 0.00 0.00 0.00 2.57
5194 11561 1.205893 AGGCAGAGGAGAACGTGAATC 59.794 52.381 0.00 0.00 0.00 2.52
5195 11562 1.646189 GCAGAGGAGAACGTGAATCC 58.354 55.000 5.95 5.95 0.00 3.01
5196 11563 1.914634 CAGAGGAGAACGTGAATCCG 58.085 55.000 7.96 0.00 38.20 4.18
5197 11564 0.818296 AGAGGAGAACGTGAATCCGG 59.182 55.000 0.00 0.00 38.20 5.14
5198 11565 0.815734 GAGGAGAACGTGAATCCGGA 59.184 55.000 6.61 6.61 38.20 5.14
5199 11566 0.818296 AGGAGAACGTGAATCCGGAG 59.182 55.000 11.34 0.00 38.20 4.63
5213 11580 2.977578 CGGAGGAGGAAGAGGTTGA 58.022 57.895 0.00 0.00 0.00 3.18
5214 11581 1.267121 CGGAGGAGGAAGAGGTTGAA 58.733 55.000 0.00 0.00 0.00 2.69
5215 11582 1.834263 CGGAGGAGGAAGAGGTTGAAT 59.166 52.381 0.00 0.00 0.00 2.57
5216 11583 2.419297 CGGAGGAGGAAGAGGTTGAATG 60.419 54.545 0.00 0.00 0.00 2.67
5217 11584 2.637947 GAGGAGGAAGAGGTTGAATGC 58.362 52.381 0.00 0.00 0.00 3.56
5218 11585 1.065854 AGGAGGAAGAGGTTGAATGCG 60.066 52.381 0.00 0.00 0.00 4.73
5219 11586 1.066143 GGAGGAAGAGGTTGAATGCGA 60.066 52.381 0.00 0.00 0.00 5.10
5220 11587 2.275318 GAGGAAGAGGTTGAATGCGAG 58.725 52.381 0.00 0.00 0.00 5.03
5221 11588 1.065854 AGGAAGAGGTTGAATGCGAGG 60.066 52.381 0.00 0.00 0.00 4.63
5222 11589 0.729690 GAAGAGGTTGAATGCGAGGC 59.270 55.000 0.00 0.00 0.00 4.70
5223 11590 0.326264 AAGAGGTTGAATGCGAGGCT 59.674 50.000 0.00 0.00 0.00 4.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 3.606886 GTTCTTCCCTGAACTCGCA 57.393 52.632 0.00 0.00 42.03 5.10
39 40 1.423921 TCCCCAAGTTCTTCCCTGAAC 59.576 52.381 0.00 0.00 44.67 3.18
43 44 3.510459 CAAATTCCCCAAGTTCTTCCCT 58.490 45.455 0.00 0.00 0.00 4.20
87 88 0.739813 GCTGGCTTTGTATCGTCCGT 60.740 55.000 0.00 0.00 0.00 4.69
90 91 1.429148 CCGGCTGGCTTTGTATCGTC 61.429 60.000 0.00 0.00 0.00 4.20
91 92 1.449601 CCGGCTGGCTTTGTATCGT 60.450 57.895 0.00 0.00 0.00 3.73
92 93 0.742990 TTCCGGCTGGCTTTGTATCG 60.743 55.000 6.73 0.00 34.14 2.92
108 109 2.183555 CCTAGGCCGTCGTGTTCC 59.816 66.667 0.00 0.00 0.00 3.62
109 110 2.163601 AACCCTAGGCCGTCGTGTTC 62.164 60.000 2.05 0.00 0.00 3.18
126 127 8.239314 GGCAACTAACTTGTAATAGGGTTAAAC 58.761 37.037 0.00 0.00 31.73 2.01
155 156 1.878953 TCTCTTTGTTTGGCCGAGAC 58.121 50.000 0.00 0.00 0.00 3.36
156 157 2.104111 TCTTCTCTTTGTTTGGCCGAGA 59.896 45.455 0.00 0.00 0.00 4.04
161 162 6.589907 TGTTCTTTTTCTTCTCTTTGTTTGGC 59.410 34.615 0.00 0.00 0.00 4.52
163 164 9.962759 CATTGTTCTTTTTCTTCTCTTTGTTTG 57.037 29.630 0.00 0.00 0.00 2.93
171 212 7.121911 GCAAAAGCATTGTTCTTTTTCTTCTC 58.878 34.615 4.47 0.00 40.57 2.87
180 221 3.451141 TTCGGCAAAAGCATTGTTCTT 57.549 38.095 4.47 0.00 0.00 2.52
181 222 3.123050 GTTTCGGCAAAAGCATTGTTCT 58.877 40.909 4.47 0.00 0.00 3.01
182 223 2.863137 TGTTTCGGCAAAAGCATTGTTC 59.137 40.909 4.47 0.00 0.00 3.18
185 226 2.347476 CGTTGTTTCGGCAAAAGCATTG 60.347 45.455 0.00 0.00 0.00 2.82
202 243 4.681942 GCTAGTAGCCTTGTCATATCGTTG 59.318 45.833 11.33 0.00 34.48 4.10
203 244 4.872664 GCTAGTAGCCTTGTCATATCGTT 58.127 43.478 11.33 0.00 34.48 3.85
204 245 4.506886 GCTAGTAGCCTTGTCATATCGT 57.493 45.455 11.33 0.00 34.48 3.73
227 275 4.201666 GCTGACGTCAATCTCAGATCAAAC 60.202 45.833 20.49 0.00 36.75 2.93
229 277 3.056607 TGCTGACGTCAATCTCAGATCAA 60.057 43.478 20.49 0.00 36.75 2.57
297 345 4.564782 TTCAGCCACAAGATCTTCATCT 57.435 40.909 4.57 0.00 41.59 2.90
298 346 5.831702 AATTCAGCCACAAGATCTTCATC 57.168 39.130 4.57 0.00 0.00 2.92
302 350 6.600882 ATTCAAATTCAGCCACAAGATCTT 57.399 33.333 0.88 0.88 0.00 2.40
311 359 4.158786 TCAAGGGAATTCAAATTCAGCCA 58.841 39.130 15.35 0.00 45.10 4.75
312 360 4.806640 TCAAGGGAATTCAAATTCAGCC 57.193 40.909 15.35 9.32 45.10 4.85
313 361 5.636543 CAGTTCAAGGGAATTCAAATTCAGC 59.363 40.000 15.35 1.73 45.10 4.26
314 362 6.161381 CCAGTTCAAGGGAATTCAAATTCAG 58.839 40.000 15.35 4.67 45.10 3.02
315 363 5.602145 ACCAGTTCAAGGGAATTCAAATTCA 59.398 36.000 15.35 0.00 45.10 2.57
335 383 0.804933 GGTTAAGCGCCTCGTACCAG 60.805 60.000 2.29 0.00 0.00 4.00
343 391 1.812571 CACTTCATTGGTTAAGCGCCT 59.187 47.619 2.29 0.00 0.00 5.52
353 401 5.276270 CAGACACTTCAAACACTTCATTGG 58.724 41.667 0.00 0.00 0.00 3.16
354 402 4.736793 GCAGACACTTCAAACACTTCATTG 59.263 41.667 0.00 0.00 0.00 2.82
355 403 4.641989 AGCAGACACTTCAAACACTTCATT 59.358 37.500 0.00 0.00 0.00 2.57
357 405 3.609853 AGCAGACACTTCAAACACTTCA 58.390 40.909 0.00 0.00 0.00 3.02
367 415 4.688413 CCTAACTGAAGAAGCAGACACTTC 59.312 45.833 0.00 0.00 45.29 3.01
372 420 2.303311 ACCCCTAACTGAAGAAGCAGAC 59.697 50.000 0.00 0.00 39.20 3.51
374 422 2.569404 AGACCCCTAACTGAAGAAGCAG 59.431 50.000 0.00 0.00 41.63 4.24
377 425 3.578716 TGTCAGACCCCTAACTGAAGAAG 59.421 47.826 0.00 0.00 43.29 2.85
393 441 2.852075 GGGTGGGGGTGTGTCAGA 60.852 66.667 0.00 0.00 0.00 3.27
403 451 3.610479 AAATGGGGTGGGGTGGGG 61.610 66.667 0.00 0.00 0.00 4.96
408 456 1.677633 GTCGACAAATGGGGTGGGG 60.678 63.158 11.55 0.00 0.00 4.96
424 472 2.291282 TGTATGGATTTGTGGGTGGGTC 60.291 50.000 0.00 0.00 0.00 4.46
426 474 2.099405 GTGTATGGATTTGTGGGTGGG 58.901 52.381 0.00 0.00 0.00 4.61
427 475 2.801483 TGTGTATGGATTTGTGGGTGG 58.199 47.619 0.00 0.00 0.00 4.61
428 476 3.429272 GCATGTGTATGGATTTGTGGGTG 60.429 47.826 0.00 0.00 34.79 4.61
431 479 4.364860 CATGCATGTGTATGGATTTGTGG 58.635 43.478 18.91 0.00 41.91 4.17
432 480 3.799963 GCATGCATGTGTATGGATTTGTG 59.200 43.478 26.79 0.00 41.91 3.33
433 481 3.447944 TGCATGCATGTGTATGGATTTGT 59.552 39.130 26.79 0.00 41.91 2.83
471 536 9.158364 GTCGTATGTTTGTTGCTATCAAATATG 57.842 33.333 15.14 7.60 37.27 1.78
494 559 7.776107 AGTATGTCCAATCATATCCTATGTCG 58.224 38.462 0.00 0.00 33.68 4.35
506 571 9.696572 ACTAGTACTTTCTAGTATGTCCAATCA 57.303 33.333 0.00 0.00 45.71 2.57
509 574 9.524496 TGAACTAGTACTTTCTAGTATGTCCAA 57.476 33.333 0.00 0.00 46.49 3.53
510 575 9.696572 ATGAACTAGTACTTTCTAGTATGTCCA 57.303 33.333 0.00 0.00 46.49 4.02
548 613 8.656806 CAAAGTACATTTCCCCCTCATAGTATA 58.343 37.037 0.00 0.00 0.00 1.47
561 626 4.283467 AGGGAAAAGGCAAAGTACATTTCC 59.717 41.667 6.55 6.55 43.11 3.13
562 627 5.468540 AGGGAAAAGGCAAAGTACATTTC 57.531 39.130 0.00 0.00 0.00 2.17
565 630 4.653801 ACAAAGGGAAAAGGCAAAGTACAT 59.346 37.500 0.00 0.00 0.00 2.29
566 631 4.027437 ACAAAGGGAAAAGGCAAAGTACA 58.973 39.130 0.00 0.00 0.00 2.90
567 632 4.665833 ACAAAGGGAAAAGGCAAAGTAC 57.334 40.909 0.00 0.00 0.00 2.73
570 635 6.054941 ACAAATACAAAGGGAAAAGGCAAAG 58.945 36.000 0.00 0.00 0.00 2.77
571 636 5.995446 ACAAATACAAAGGGAAAAGGCAAA 58.005 33.333 0.00 0.00 0.00 3.68
577 3943 4.575645 ACGACGACAAATACAAAGGGAAAA 59.424 37.500 0.00 0.00 0.00 2.29
581 3947 4.240096 ACTACGACGACAAATACAAAGGG 58.760 43.478 0.00 0.00 0.00 3.95
582 3948 6.317088 TCTACTACGACGACAAATACAAAGG 58.683 40.000 0.00 0.00 0.00 3.11
594 3960 5.523369 TGTCTTCGATATCTACTACGACGA 58.477 41.667 0.00 0.00 34.59 4.20
608 3974 5.359194 ACAATCCATACCTTGTCTTCGAT 57.641 39.130 0.00 0.00 29.85 3.59
631 3997 0.176680 CAACTCCTCTGACCCCATCG 59.823 60.000 0.00 0.00 0.00 3.84
633 3999 1.912043 CTTCAACTCCTCTGACCCCAT 59.088 52.381 0.00 0.00 0.00 4.00
640 4006 3.513119 TGTCATCTCCTTCAACTCCTCTG 59.487 47.826 0.00 0.00 0.00 3.35
649 4015 4.416516 TCTACACCTTGTCATCTCCTTCA 58.583 43.478 0.00 0.00 0.00 3.02
650 4016 5.407407 TTCTACACCTTGTCATCTCCTTC 57.593 43.478 0.00 0.00 0.00 3.46
666 4032 0.447406 GCATGCACGCACATTCTACA 59.553 50.000 14.21 0.00 0.00 2.74
672 4038 0.451383 ATAAACGCATGCACGCACAT 59.549 45.000 19.57 0.00 36.19 3.21
678 4044 2.680841 TCAACCCTATAAACGCATGCAC 59.319 45.455 19.57 0.00 0.00 4.57
685 4051 5.824429 TCGATACACTCAACCCTATAAACG 58.176 41.667 0.00 0.00 0.00 3.60
686 4052 6.700520 CCTTCGATACACTCAACCCTATAAAC 59.299 42.308 0.00 0.00 0.00 2.01
717 4083 1.527736 CACGCACACTTTACCGCTTTA 59.472 47.619 0.00 0.00 0.00 1.85
718 4084 0.306533 CACGCACACTTTACCGCTTT 59.693 50.000 0.00 0.00 0.00 3.51
722 4088 1.083015 GTGCACGCACACTTTACCG 60.083 57.895 17.03 0.00 45.53 4.02
723 4089 4.914291 GTGCACGCACACTTTACC 57.086 55.556 17.03 0.00 45.53 2.85
734 4100 4.188462 TCAACCCTATAAAGATGTGCACG 58.812 43.478 13.13 0.00 0.00 5.34
740 4106 8.627208 AGCATACATTCAACCCTATAAAGATG 57.373 34.615 0.00 0.00 0.00 2.90
741 4107 7.604164 CGAGCATACATTCAACCCTATAAAGAT 59.396 37.037 0.00 0.00 0.00 2.40
742 4108 6.929049 CGAGCATACATTCAACCCTATAAAGA 59.071 38.462 0.00 0.00 0.00 2.52
747 4113 4.141711 ACACGAGCATACATTCAACCCTAT 60.142 41.667 0.00 0.00 0.00 2.57
764 4130 0.668401 TGCAGATGCTCACACACGAG 60.668 55.000 6.35 0.00 42.66 4.18
767 4133 2.030540 ACAATTGCAGATGCTCACACAC 60.031 45.455 5.05 0.00 42.66 3.82
768 4134 2.232399 ACAATTGCAGATGCTCACACA 58.768 42.857 5.05 0.00 42.66 3.72
769 4135 4.627611 ATACAATTGCAGATGCTCACAC 57.372 40.909 5.05 0.00 42.66 3.82
770 4136 4.460034 ACAATACAATTGCAGATGCTCACA 59.540 37.500 5.05 0.00 42.66 3.58
771 4137 4.796830 CACAATACAATTGCAGATGCTCAC 59.203 41.667 5.05 0.00 42.66 3.51
809 4175 9.611284 GTTGCTTGTTTTCTTTTTCTTTTGAAT 57.389 25.926 0.00 0.00 38.37 2.57
810 4176 8.073167 GGTTGCTTGTTTTCTTTTTCTTTTGAA 58.927 29.630 0.00 0.00 36.52 2.69
811 4177 7.443879 AGGTTGCTTGTTTTCTTTTTCTTTTGA 59.556 29.630 0.00 0.00 0.00 2.69
812 4178 7.584108 AGGTTGCTTGTTTTCTTTTTCTTTTG 58.416 30.769 0.00 0.00 0.00 2.44
817 4186 6.147000 TGACAAGGTTGCTTGTTTTCTTTTTC 59.853 34.615 0.00 0.00 46.25 2.29
888 4257 2.560542 GAGATGGAGTGGATATGCGACT 59.439 50.000 0.00 0.29 38.36 4.18
889 4258 2.560542 AGAGATGGAGTGGATATGCGAC 59.439 50.000 0.00 0.00 0.00 5.19
928 4299 1.376037 GGCTCGGGGACTTGTTGAG 60.376 63.158 0.00 0.00 0.00 3.02
954 4325 2.797786 GTGGGCCCACATGTAAGTTAA 58.202 47.619 43.88 7.90 45.53 2.01
966 4337 2.655090 CATACATATGTGTGGGCCCA 57.345 50.000 24.45 24.45 39.39 5.36
1146 4527 1.000896 AATCGAGGCTTGGGTTGGG 60.001 57.895 0.97 0.00 0.00 4.12
1219 4601 0.670546 ATGGTTGAGTCCTTCACGCG 60.671 55.000 3.53 3.53 34.94 6.01
1362 4745 3.305335 CCAGGAAAAGTGCACCACATTAC 60.305 47.826 14.63 4.44 36.74 1.89
1529 4912 1.043116 CGCTACCTCCCATGACAGGA 61.043 60.000 14.97 3.30 33.52 3.86
1530 4913 1.443407 CGCTACCTCCCATGACAGG 59.557 63.158 8.07 8.07 35.69 4.00
1531 4914 1.227380 GCGCTACCTCCCATGACAG 60.227 63.158 0.00 0.00 0.00 3.51
1567 4952 7.308951 CCATTTACACTCGTATTTCCAACCTTT 60.309 37.037 0.00 0.00 0.00 3.11
1629 5014 4.213482 AGTCTGTGTTAATTTCAACCGCTC 59.787 41.667 0.00 0.00 0.00 5.03
1634 5019 5.587289 TGGCAAGTCTGTGTTAATTTCAAC 58.413 37.500 0.00 0.00 0.00 3.18
1681 5066 7.189079 TCAAATTTTTGTTCCCAGTTAAGGT 57.811 32.000 3.18 0.00 39.18 3.50
1710 5095 9.864034 CGCATAAAAGTAACAGGTCATATAAAG 57.136 33.333 0.00 0.00 0.00 1.85
1765 5151 9.366216 CATAACGTGCTTAATCATATAGCCTTA 57.634 33.333 0.00 0.00 34.03 2.69
2040 5622 3.574614 CCAACAAAATCTAAACCGCCTG 58.425 45.455 0.00 0.00 0.00 4.85
2076 5659 6.777526 AGTTAAAATGCGCATGCTTTAAAA 57.222 29.167 28.48 15.79 43.34 1.52
2106 5689 4.540359 AGTTAACGCCATAACACTACCA 57.460 40.909 0.00 0.00 38.07 3.25
2147 5745 6.470556 CAGTAGTTCAGTACAGATCATTCACG 59.529 42.308 0.00 0.00 0.00 4.35
2162 5760 4.627467 CCACGGAAAGAATCAGTAGTTCAG 59.373 45.833 0.00 0.00 34.49 3.02
2163 5761 4.566004 CCACGGAAAGAATCAGTAGTTCA 58.434 43.478 0.00 0.00 34.49 3.18
2164 5762 3.371285 GCCACGGAAAGAATCAGTAGTTC 59.629 47.826 0.00 0.00 34.49 3.01
2165 5763 3.244422 TGCCACGGAAAGAATCAGTAGTT 60.244 43.478 0.00 0.00 34.49 2.24
2166 5764 2.301870 TGCCACGGAAAGAATCAGTAGT 59.698 45.455 0.00 0.00 34.49 2.73
2167 5765 2.972625 TGCCACGGAAAGAATCAGTAG 58.027 47.619 0.00 0.00 34.49 2.57
2168 5766 3.270027 CATGCCACGGAAAGAATCAGTA 58.730 45.455 0.00 0.00 34.49 2.74
2169 5767 2.086869 CATGCCACGGAAAGAATCAGT 58.913 47.619 0.00 0.00 36.88 3.41
2490 6088 7.814587 CGATAGGCACATTTTATATGTCTCTGA 59.185 37.037 0.00 0.00 29.39 3.27
2516 6114 6.317789 ACAATGCATACATACTGGCAATAC 57.682 37.500 0.00 0.00 40.02 1.89
2542 6140 3.200605 TGCCAAGTGTCATGGATCTATGT 59.799 43.478 17.55 0.00 40.56 2.29
2543 6141 3.812262 TGCCAAGTGTCATGGATCTATG 58.188 45.455 12.62 12.62 40.56 2.23
2582 6182 6.686630 TGTTTCATCCGTTGCATAAATCTTT 58.313 32.000 0.00 0.00 0.00 2.52
2615 6218 7.606858 TCATTCACAAGATTCTTCTGCTTAG 57.393 36.000 0.00 0.00 30.72 2.18
2616 6219 7.879677 TCTTCATTCACAAGATTCTTCTGCTTA 59.120 33.333 0.00 0.00 30.72 3.09
2617 6220 6.713903 TCTTCATTCACAAGATTCTTCTGCTT 59.286 34.615 0.00 0.00 30.72 3.91
2670 6273 5.972935 TCTCTTGTTTGGCAATCTATACGA 58.027 37.500 0.00 0.00 36.36 3.43
2825 6429 1.265095 CACCACACATGTTCTGAGCAC 59.735 52.381 0.00 0.00 0.00 4.40
2830 6434 3.002656 GTCTTGACACCACACATGTTCTG 59.997 47.826 0.00 0.00 0.00 3.02
2854 6458 9.813446 ACTAGTATCATTTTACTTTTACTCCCG 57.187 33.333 0.00 0.00 34.35 5.14
2930 6535 6.773976 AACTTCAAACCAAACAGATGAGAA 57.226 33.333 0.00 0.00 0.00 2.87
2949 6554 3.620488 TGTGCTCAGAGTTCCAAAACTT 58.380 40.909 0.00 0.00 45.80 2.66
3031 6639 6.592798 TGTTGGTTTTAACTACTGAACTCG 57.407 37.500 0.00 0.00 0.00 4.18
3077 6685 5.459110 TCGGCGTACATAATTTGAACTTC 57.541 39.130 6.85 0.00 0.00 3.01
3096 6704 3.685139 ACTCATACATAAGCCCATCGG 57.315 47.619 0.00 0.00 0.00 4.18
3352 6967 7.668492 TCTTTACAGAGGGAGTACTTTCTTTC 58.332 38.462 0.00 0.00 0.00 2.62
3363 6978 9.757227 CACTCTTATATTTCTTTACAGAGGGAG 57.243 37.037 0.00 0.00 32.92 4.30
3364 6979 9.268282 ACACTCTTATATTTCTTTACAGAGGGA 57.732 33.333 2.59 0.00 34.50 4.20
3365 6980 9.892130 AACACTCTTATATTTCTTTACAGAGGG 57.108 33.333 0.00 0.00 36.55 4.30
3398 7013 6.932947 AGAGCGTTTAGACCACTAAAATAGT 58.067 36.000 0.00 0.00 45.97 2.12
3399 7014 7.829378 AAGAGCGTTTAGACCACTAAAATAG 57.171 36.000 0.00 0.00 45.97 1.73
3402 7017 9.880157 AATATAAGAGCGTTTAGACCACTAAAA 57.120 29.630 0.00 0.00 45.97 1.52
3403 7018 9.880157 AAATATAAGAGCGTTTAGACCACTAAA 57.120 29.630 0.00 0.00 43.52 1.85
3404 7019 9.309516 CAAATATAAGAGCGTTTAGACCACTAA 57.690 33.333 0.00 0.00 36.90 2.24
3405 7020 8.472413 ACAAATATAAGAGCGTTTAGACCACTA 58.528 33.333 0.00 0.00 0.00 2.74
3406 7021 7.328737 ACAAATATAAGAGCGTTTAGACCACT 58.671 34.615 0.00 0.00 0.00 4.00
3407 7022 7.535489 ACAAATATAAGAGCGTTTAGACCAC 57.465 36.000 0.00 0.00 0.00 4.16
3408 7023 8.556213 AAACAAATATAAGAGCGTTTAGACCA 57.444 30.769 0.00 0.00 0.00 4.02
3409 7024 9.911980 GTAAACAAATATAAGAGCGTTTAGACC 57.088 33.333 0.00 0.00 31.53 3.85
3410 7025 9.615779 CGTAAACAAATATAAGAGCGTTTAGAC 57.384 33.333 0.00 0.00 31.53 2.59
3411 7026 8.810427 CCGTAAACAAATATAAGAGCGTTTAGA 58.190 33.333 0.00 0.00 31.53 2.10
3412 7027 8.810427 TCCGTAAACAAATATAAGAGCGTTTAG 58.190 33.333 0.00 0.00 31.53 1.85
3413 7028 8.700722 TCCGTAAACAAATATAAGAGCGTTTA 57.299 30.769 0.00 0.00 0.00 2.01
3414 7029 7.201582 CCTCCGTAAACAAATATAAGAGCGTTT 60.202 37.037 0.00 0.00 0.00 3.60
3417 7032 5.176958 CCCTCCGTAAACAAATATAAGAGCG 59.823 44.000 0.00 0.00 0.00 5.03
3418 7033 6.285990 TCCCTCCGTAAACAAATATAAGAGC 58.714 40.000 0.00 0.00 0.00 4.09
3419 7034 7.498443 ACTCCCTCCGTAAACAAATATAAGAG 58.502 38.462 0.00 0.00 0.00 2.85
3420 7035 7.427989 ACTCCCTCCGTAAACAAATATAAGA 57.572 36.000 0.00 0.00 0.00 2.10
3425 7040 9.592196 AGTATATACTCCCTCCGTAAACAAATA 57.408 33.333 9.71 0.00 0.00 1.40
3427 7042 7.902920 AGTATATACTCCCTCCGTAAACAAA 57.097 36.000 9.71 0.00 0.00 2.83
3428 7043 7.342799 ACAAGTATATACTCCCTCCGTAAACAA 59.657 37.037 15.72 0.00 34.99 2.83
3429 7044 6.835488 ACAAGTATATACTCCCTCCGTAAACA 59.165 38.462 15.72 0.00 34.99 2.83
3430 7045 7.230309 AGACAAGTATATACTCCCTCCGTAAAC 59.770 40.741 15.72 0.00 34.99 2.01
3431 7046 7.293073 AGACAAGTATATACTCCCTCCGTAAA 58.707 38.462 15.72 0.00 34.99 2.01
3433 7048 6.445451 AGACAAGTATATACTCCCTCCGTA 57.555 41.667 15.72 0.00 34.99 4.02
3434 7049 5.321934 AGACAAGTATATACTCCCTCCGT 57.678 43.478 15.72 6.76 34.99 4.69
3435 7050 9.275398 GATATAGACAAGTATATACTCCCTCCG 57.725 40.741 15.72 3.95 34.99 4.63
3470 7389 5.964887 TTGCAATCTTAAACAACAGCAAC 57.035 34.783 0.00 0.00 36.01 4.17
3544 7463 5.618056 ACACAAGCACATCTTTATCAGTG 57.382 39.130 0.00 0.00 32.86 3.66
3659 7578 4.953940 TGGATTGGGTTCTTTTTCCTTG 57.046 40.909 0.00 0.00 0.00 3.61
3660 7579 5.154418 TGATGGATTGGGTTCTTTTTCCTT 58.846 37.500 0.00 0.00 0.00 3.36
3709 7628 0.247655 AACTGCGCGCAAATACATCG 60.248 50.000 35.50 22.26 0.00 3.84
3747 7666 1.134037 TCTTGCAAAGTACCCGTGGTT 60.134 47.619 0.00 0.00 46.34 3.67
3760 7679 0.597568 CACGGCTTTCCATCTTGCAA 59.402 50.000 0.00 0.00 0.00 4.08
3908 7827 1.821216 ACACTCCTTTGTATTGGCCG 58.179 50.000 0.00 0.00 0.00 6.13
3913 7832 3.237268 TGGCCAACACTCCTTTGTATT 57.763 42.857 0.61 0.00 0.00 1.89
3916 7835 1.133513 TCATGGCCAACACTCCTTTGT 60.134 47.619 10.96 0.00 0.00 2.83
3918 7837 1.548582 CCTCATGGCCAACACTCCTTT 60.549 52.381 10.96 0.00 0.00 3.11
3920 7839 1.687612 CCTCATGGCCAACACTCCT 59.312 57.895 10.96 0.00 0.00 3.69
3921 7840 4.326255 CCTCATGGCCAACACTCC 57.674 61.111 10.96 0.00 0.00 3.85
3938 7857 2.642425 CCAGGAGCATGATCATGGC 58.358 57.895 29.24 23.94 43.50 4.40
4128 8047 0.480690 TTGCCACCACCACCAGTAAT 59.519 50.000 0.00 0.00 0.00 1.89
4185 8104 4.097437 AGTTCGTCGTAAGCTGGATCATTA 59.903 41.667 0.00 0.00 37.18 1.90
4193 8160 1.986378 CCTTGAGTTCGTCGTAAGCTG 59.014 52.381 0.00 0.00 37.18 4.24
4200 8167 2.985139 GGAAGTTACCTTGAGTTCGTCG 59.015 50.000 0.00 0.00 0.00 5.12
4212 8179 4.383880 GGAGGGAGTACATTGGAAGTTACC 60.384 50.000 0.00 0.00 0.00 2.85
4249 8216 7.558161 TTGGACAGACAAATCTAATATGCAG 57.442 36.000 0.00 0.00 32.25 4.41
4437 10801 2.299297 ACTCGGGATTGTCTTCGTTTCT 59.701 45.455 0.00 0.00 0.00 2.52
4447 10811 3.973206 TTGTATGTCACTCGGGATTGT 57.027 42.857 0.00 0.00 0.00 2.71
4449 10813 5.745227 AGAATTTGTATGTCACTCGGGATT 58.255 37.500 0.00 0.00 0.00 3.01
4450 10814 5.359194 AGAATTTGTATGTCACTCGGGAT 57.641 39.130 0.00 0.00 0.00 3.85
4452 10816 6.761242 TGATTAGAATTTGTATGTCACTCGGG 59.239 38.462 0.00 0.00 0.00 5.14
4456 10820 9.725019 TGAACTGATTAGAATTTGTATGTCACT 57.275 29.630 0.00 0.00 0.00 3.41
4463 10827 8.375506 AGTGGAGTGAACTGATTAGAATTTGTA 58.624 33.333 0.00 0.00 0.00 2.41
4465 10829 7.678947 AGTGGAGTGAACTGATTAGAATTTG 57.321 36.000 0.00 0.00 0.00 2.32
4467 10831 8.160106 AGAAAGTGGAGTGAACTGATTAGAATT 58.840 33.333 0.00 0.00 0.00 2.17
4469 10833 6.931281 CAGAAAGTGGAGTGAACTGATTAGAA 59.069 38.462 0.00 0.00 0.00 2.10
4470 10834 6.267699 TCAGAAAGTGGAGTGAACTGATTAGA 59.732 38.462 0.00 0.00 0.00 2.10
4471 10835 6.459066 TCAGAAAGTGGAGTGAACTGATTAG 58.541 40.000 0.00 0.00 0.00 1.73
4514 10880 2.534939 GCGTCTATGCACGTGAAATCAC 60.535 50.000 22.23 8.46 42.04 3.06
4518 10884 1.067693 CTGCGTCTATGCACGTGAAA 58.932 50.000 22.23 6.81 40.62 2.69
4523 10889 2.224217 CCGTCTGCGTCTATGCACG 61.224 63.158 0.00 0.00 40.62 5.34
4552 10918 3.394274 TGGATTATATATGGGCCATCCGG 59.606 47.826 25.07 0.00 38.76 5.14
4553 10919 4.389374 GTGGATTATATATGGGCCATCCG 58.611 47.826 25.07 0.00 38.76 4.18
4554 10920 4.447762 GGGTGGATTATATATGGGCCATCC 60.448 50.000 25.07 17.65 39.29 3.51
4555 10921 4.167892 TGGGTGGATTATATATGGGCCATC 59.832 45.833 25.07 7.48 0.00 3.51
4556 10922 4.126052 TGGGTGGATTATATATGGGCCAT 58.874 43.478 24.69 24.69 0.00 4.40
4557 10923 3.546840 TGGGTGGATTATATATGGGCCA 58.453 45.455 9.61 9.61 0.00 5.36
4559 10925 5.105917 CGTTTTGGGTGGATTATATATGGGC 60.106 44.000 0.00 0.00 0.00 5.36
4560 10926 5.105917 GCGTTTTGGGTGGATTATATATGGG 60.106 44.000 0.00 0.00 0.00 4.00
4561 10927 5.391523 CGCGTTTTGGGTGGATTATATATGG 60.392 44.000 0.00 0.00 0.00 2.74
4563 10929 5.310451 ACGCGTTTTGGGTGGATTATATAT 58.690 37.500 5.58 0.00 42.99 0.86
4564 10930 4.706035 ACGCGTTTTGGGTGGATTATATA 58.294 39.130 5.58 0.00 42.99 0.86
4569 10936 4.167597 ACGCGTTTTGGGTGGATT 57.832 50.000 5.58 0.00 42.99 3.01
4577 10944 2.330231 AATCATGACCACGCGTTTTG 57.670 45.000 10.22 3.39 0.00 2.44
4589 10956 8.717717 AGATAAGATTGGGTCACTAAATCATGA 58.282 33.333 0.00 0.00 33.61 3.07
4590 10957 8.781196 CAGATAAGATTGGGTCACTAAATCATG 58.219 37.037 5.98 0.00 33.61 3.07
4591 10958 7.941238 CCAGATAAGATTGGGTCACTAAATCAT 59.059 37.037 5.98 0.00 33.61 2.45
4592 10959 7.092444 ACCAGATAAGATTGGGTCACTAAATCA 60.092 37.037 5.98 0.00 38.82 2.57
4593 10960 7.283329 ACCAGATAAGATTGGGTCACTAAATC 58.717 38.462 0.00 0.00 38.82 2.17
4594 10961 7.213178 ACCAGATAAGATTGGGTCACTAAAT 57.787 36.000 0.00 0.00 38.82 1.40
4595 10962 6.636454 ACCAGATAAGATTGGGTCACTAAA 57.364 37.500 0.00 0.00 38.82 1.85
4596 10963 6.235231 GACCAGATAAGATTGGGTCACTAA 57.765 41.667 0.00 0.00 45.70 2.24
4597 10964 5.871396 GACCAGATAAGATTGGGTCACTA 57.129 43.478 0.00 0.00 45.70 2.74
4598 10965 4.762289 GACCAGATAAGATTGGGTCACT 57.238 45.455 0.00 0.00 45.70 3.41
4614 10981 1.205417 GGGTGGCAAAATCATGACCAG 59.795 52.381 0.00 0.00 30.62 4.00
4633 11000 2.907917 TTTGCCCCGTTCGGTTGG 60.908 61.111 10.36 6.36 0.00 3.77
4662 11029 1.046472 ATTACTGATCCGTCCGGGCA 61.046 55.000 6.96 4.18 34.94 5.36
4663 11030 0.319641 GATTACTGATCCGTCCGGGC 60.320 60.000 0.00 0.00 34.94 6.13
4664 11031 0.317479 GGATTACTGATCCGTCCGGG 59.683 60.000 0.00 0.00 44.73 5.73
4674 11041 2.241176 GGTTGGACATGGGGATTACTGA 59.759 50.000 0.00 0.00 0.00 3.41
4676 11043 1.569072 GGGTTGGACATGGGGATTACT 59.431 52.381 0.00 0.00 0.00 2.24
4688 11055 2.040544 CGCTCATGTGGGGTTGGAC 61.041 63.158 4.04 0.00 0.00 4.02
4695 11062 1.452651 ATTCAGGCGCTCATGTGGG 60.453 57.895 7.64 7.42 0.00 4.61
4696 11063 1.725665 CATTCAGGCGCTCATGTGG 59.274 57.895 7.64 0.00 0.00 4.17
4706 11073 2.747460 TGTCAGGCGCATTCAGGC 60.747 61.111 10.83 0.00 0.00 4.85
4707 11074 2.743752 CGTGTCAGGCGCATTCAGG 61.744 63.158 10.83 6.02 0.00 3.86
4708 11075 1.959899 GACGTGTCAGGCGCATTCAG 61.960 60.000 10.83 0.00 0.00 3.02
4709 11076 2.027073 GACGTGTCAGGCGCATTCA 61.027 57.895 10.83 0.29 0.00 2.57
4710 11077 2.778679 GACGTGTCAGGCGCATTC 59.221 61.111 10.83 0.00 0.00 2.67
4711 11078 3.112075 CGACGTGTCAGGCGCATT 61.112 61.111 10.83 0.00 0.00 3.56
4715 11082 4.039357 AGTCCGACGTGTCAGGCG 62.039 66.667 0.00 0.00 0.00 5.52
4716 11083 2.214181 ATCAGTCCGACGTGTCAGGC 62.214 60.000 0.00 0.00 0.00 4.85
4717 11084 1.064208 CTATCAGTCCGACGTGTCAGG 59.936 57.143 0.00 3.10 0.00 3.86
4718 11085 1.532090 GCTATCAGTCCGACGTGTCAG 60.532 57.143 0.00 0.00 0.00 3.51
4719 11086 0.450583 GCTATCAGTCCGACGTGTCA 59.549 55.000 0.00 0.00 0.00 3.58
4720 11087 0.450583 TGCTATCAGTCCGACGTGTC 59.549 55.000 0.00 0.00 0.00 3.67
4721 11088 1.103803 ATGCTATCAGTCCGACGTGT 58.896 50.000 0.00 0.00 0.00 4.49
4722 11089 2.548480 TCTATGCTATCAGTCCGACGTG 59.452 50.000 0.00 0.00 0.00 4.49
4723 11090 2.548904 GTCTATGCTATCAGTCCGACGT 59.451 50.000 0.00 0.00 0.00 4.34
4724 11091 2.095668 GGTCTATGCTATCAGTCCGACG 60.096 54.545 0.00 0.00 0.00 5.12
4725 11092 2.229302 GGGTCTATGCTATCAGTCCGAC 59.771 54.545 0.00 0.00 0.00 4.79
4726 11093 2.158519 TGGGTCTATGCTATCAGTCCGA 60.159 50.000 0.00 0.00 0.00 4.55
4727 11094 2.239400 TGGGTCTATGCTATCAGTCCG 58.761 52.381 0.00 0.00 0.00 4.79
4728 11095 4.199432 CATGGGTCTATGCTATCAGTCC 57.801 50.000 0.00 0.00 0.00 3.85
4738 11105 3.700539 TGGTCATTTTGCATGGGTCTATG 59.299 43.478 0.00 0.00 0.00 2.23
4739 11106 3.956199 CTGGTCATTTTGCATGGGTCTAT 59.044 43.478 0.00 0.00 0.00 1.98
4740 11107 3.355378 CTGGTCATTTTGCATGGGTCTA 58.645 45.455 0.00 0.00 0.00 2.59
4741 11108 2.173519 CTGGTCATTTTGCATGGGTCT 58.826 47.619 0.00 0.00 0.00 3.85
4742 11109 1.205417 CCTGGTCATTTTGCATGGGTC 59.795 52.381 0.00 0.00 0.00 4.46
4743 11110 1.269012 CCTGGTCATTTTGCATGGGT 58.731 50.000 0.00 0.00 0.00 4.51
4744 11111 0.108041 GCCTGGTCATTTTGCATGGG 60.108 55.000 0.00 0.00 0.00 4.00
4745 11112 0.899720 AGCCTGGTCATTTTGCATGG 59.100 50.000 0.00 0.00 0.00 3.66
4746 11113 1.546923 TCAGCCTGGTCATTTTGCATG 59.453 47.619 0.00 0.00 0.00 4.06
4747 11114 1.547372 GTCAGCCTGGTCATTTTGCAT 59.453 47.619 0.00 0.00 0.00 3.96
4748 11115 0.961019 GTCAGCCTGGTCATTTTGCA 59.039 50.000 0.00 0.00 0.00 4.08
4749 11116 0.244721 GGTCAGCCTGGTCATTTTGC 59.755 55.000 0.00 0.00 0.00 3.68
4750 11117 0.523072 CGGTCAGCCTGGTCATTTTG 59.477 55.000 0.00 0.00 0.00 2.44
4751 11118 0.609131 CCGGTCAGCCTGGTCATTTT 60.609 55.000 0.00 0.00 0.00 1.82
4752 11119 1.002134 CCGGTCAGCCTGGTCATTT 60.002 57.895 0.00 0.00 0.00 2.32
4753 11120 0.907704 TACCGGTCAGCCTGGTCATT 60.908 55.000 12.40 0.00 40.40 2.57
4754 11121 0.907704 TTACCGGTCAGCCTGGTCAT 60.908 55.000 12.40 0.00 40.40 3.06
4755 11122 0.907704 ATTACCGGTCAGCCTGGTCA 60.908 55.000 12.40 0.00 40.40 4.02
4756 11123 0.179081 GATTACCGGTCAGCCTGGTC 60.179 60.000 12.40 0.00 40.40 4.02
4757 11124 1.623542 GGATTACCGGTCAGCCTGGT 61.624 60.000 15.87 0.00 41.84 4.00
4758 11125 1.146263 GGATTACCGGTCAGCCTGG 59.854 63.158 15.87 0.00 35.52 4.45
4759 11126 0.105039 GAGGATTACCGGTCAGCCTG 59.895 60.000 29.49 0.00 41.83 4.85
4760 11127 1.049289 GGAGGATTACCGGTCAGCCT 61.049 60.000 25.19 25.19 41.83 4.58
4761 11128 1.446366 GGAGGATTACCGGTCAGCC 59.554 63.158 15.38 15.38 41.83 4.85
4762 11129 1.067582 CGGAGGATTACCGGTCAGC 59.932 63.158 12.40 1.48 45.65 4.26
4784 11151 3.712881 GTTCGGCGTGTCTGGCAC 61.713 66.667 6.85 1.45 44.36 5.01
4785 11152 3.923864 AGTTCGGCGTGTCTGGCA 61.924 61.111 6.85 0.00 0.00 4.92
4786 11153 3.414700 CAGTTCGGCGTGTCTGGC 61.415 66.667 6.85 0.00 0.00 4.85
4787 11154 2.022129 GTCAGTTCGGCGTGTCTGG 61.022 63.158 20.53 4.87 0.00 3.86
4788 11155 2.022129 GGTCAGTTCGGCGTGTCTG 61.022 63.158 6.85 13.67 0.00 3.51
4789 11156 2.338984 GGTCAGTTCGGCGTGTCT 59.661 61.111 6.85 0.85 0.00 3.41
4790 11157 2.028484 TGGTCAGTTCGGCGTGTC 59.972 61.111 6.85 0.00 0.00 3.67
4791 11158 2.279918 GTGGTCAGTTCGGCGTGT 60.280 61.111 6.85 0.00 0.00 4.49
4792 11159 0.389296 TATGTGGTCAGTTCGGCGTG 60.389 55.000 6.85 0.00 0.00 5.34
4793 11160 0.108804 CTATGTGGTCAGTTCGGCGT 60.109 55.000 6.85 0.00 0.00 5.68
4794 11161 0.172578 TCTATGTGGTCAGTTCGGCG 59.827 55.000 0.00 0.00 0.00 6.46
4795 11162 1.641577 GTCTATGTGGTCAGTTCGGC 58.358 55.000 0.00 0.00 0.00 5.54
4796 11163 1.134788 GGGTCTATGTGGTCAGTTCGG 60.135 57.143 0.00 0.00 0.00 4.30
4797 11164 1.548719 TGGGTCTATGTGGTCAGTTCG 59.451 52.381 0.00 0.00 0.00 3.95
4798 11165 2.674177 CGTGGGTCTATGTGGTCAGTTC 60.674 54.545 0.00 0.00 0.00 3.01
4799 11166 1.275291 CGTGGGTCTATGTGGTCAGTT 59.725 52.381 0.00 0.00 0.00 3.16
4800 11167 0.895530 CGTGGGTCTATGTGGTCAGT 59.104 55.000 0.00 0.00 0.00 3.41
4801 11168 0.460284 GCGTGGGTCTATGTGGTCAG 60.460 60.000 0.00 0.00 0.00 3.51
4802 11169 1.188871 TGCGTGGGTCTATGTGGTCA 61.189 55.000 0.00 0.00 0.00 4.02
4803 11170 0.460284 CTGCGTGGGTCTATGTGGTC 60.460 60.000 0.00 0.00 0.00 4.02
4804 11171 0.902984 TCTGCGTGGGTCTATGTGGT 60.903 55.000 0.00 0.00 0.00 4.16
4805 11172 0.249120 TTCTGCGTGGGTCTATGTGG 59.751 55.000 0.00 0.00 0.00 4.17
4806 11173 1.732259 GTTTCTGCGTGGGTCTATGTG 59.268 52.381 0.00 0.00 0.00 3.21
4807 11174 1.338769 GGTTTCTGCGTGGGTCTATGT 60.339 52.381 0.00 0.00 0.00 2.29
4808 11175 1.369625 GGTTTCTGCGTGGGTCTATG 58.630 55.000 0.00 0.00 0.00 2.23
4809 11176 0.252197 GGGTTTCTGCGTGGGTCTAT 59.748 55.000 0.00 0.00 0.00 1.98
4810 11177 1.122632 TGGGTTTCTGCGTGGGTCTA 61.123 55.000 0.00 0.00 0.00 2.59
4811 11178 1.779061 ATGGGTTTCTGCGTGGGTCT 61.779 55.000 0.00 0.00 0.00 3.85
4812 11179 1.303317 ATGGGTTTCTGCGTGGGTC 60.303 57.895 0.00 0.00 0.00 4.46
4813 11180 1.303317 GATGGGTTTCTGCGTGGGT 60.303 57.895 0.00 0.00 0.00 4.51
4814 11181 1.303236 TGATGGGTTTCTGCGTGGG 60.303 57.895 0.00 0.00 0.00 4.61
4815 11182 0.606401 ACTGATGGGTTTCTGCGTGG 60.606 55.000 0.00 0.00 0.00 4.94
4816 11183 1.197721 GAACTGATGGGTTTCTGCGTG 59.802 52.381 0.00 0.00 0.00 5.34
4817 11184 1.523758 GAACTGATGGGTTTCTGCGT 58.476 50.000 0.00 0.00 0.00 5.24
4818 11185 0.443869 CGAACTGATGGGTTTCTGCG 59.556 55.000 0.00 0.00 0.00 5.18
4819 11186 1.734465 CTCGAACTGATGGGTTTCTGC 59.266 52.381 0.00 0.00 0.00 4.26
4820 11187 3.319137 TCTCGAACTGATGGGTTTCTG 57.681 47.619 0.00 0.00 0.00 3.02
4821 11188 3.866449 GCTTCTCGAACTGATGGGTTTCT 60.866 47.826 0.00 0.00 0.00 2.52
4822 11189 2.416893 GCTTCTCGAACTGATGGGTTTC 59.583 50.000 0.00 0.00 0.00 2.78
4823 11190 2.427506 GCTTCTCGAACTGATGGGTTT 58.572 47.619 0.00 0.00 0.00 3.27
4824 11191 1.673033 CGCTTCTCGAACTGATGGGTT 60.673 52.381 0.00 0.00 41.67 4.11
4825 11192 0.108615 CGCTTCTCGAACTGATGGGT 60.109 55.000 0.00 0.00 41.67 4.51
4826 11193 1.424493 GCGCTTCTCGAACTGATGGG 61.424 60.000 0.00 0.00 41.67 4.00
4827 11194 1.424493 GGCGCTTCTCGAACTGATGG 61.424 60.000 7.64 0.00 41.67 3.51
4828 11195 0.459237 AGGCGCTTCTCGAACTGATG 60.459 55.000 7.64 0.00 41.67 3.07
4829 11196 0.179124 GAGGCGCTTCTCGAACTGAT 60.179 55.000 12.94 0.00 41.67 2.90
4830 11197 1.213013 GAGGCGCTTCTCGAACTGA 59.787 57.895 12.94 0.00 41.67 3.41
4831 11198 1.807573 GGAGGCGCTTCTCGAACTG 60.808 63.158 19.65 0.00 41.67 3.16
4832 11199 1.939769 GAGGAGGCGCTTCTCGAACT 61.940 60.000 19.65 7.22 41.67 3.01
4833 11200 1.517475 GAGGAGGCGCTTCTCGAAC 60.517 63.158 19.65 1.89 41.67 3.95
4834 11201 1.679305 AGAGGAGGCGCTTCTCGAA 60.679 57.895 19.65 0.00 40.82 3.71
4835 11202 2.044848 AGAGGAGGCGCTTCTCGA 60.045 61.111 19.65 0.00 40.82 4.04
4839 11206 1.197949 GAAAAACAGAGGAGGCGCTTC 59.802 52.381 11.69 11.69 0.00 3.86
4841 11208 0.951040 CGAAAAACAGAGGAGGCGCT 60.951 55.000 7.64 0.00 0.00 5.92
4848 11215 1.202770 ACCCTCACCGAAAAACAGAGG 60.203 52.381 0.00 0.00 44.26 3.69
4875 11242 1.532868 GAAGCGGCATGATACACCATC 59.467 52.381 1.45 0.00 0.00 3.51
4876 11243 1.597742 GAAGCGGCATGATACACCAT 58.402 50.000 1.45 0.00 0.00 3.55
4879 11246 1.934463 CCGAAGCGGCATGATACAC 59.066 57.895 1.45 0.00 41.17 2.90
4880 11247 4.436515 CCGAAGCGGCATGATACA 57.563 55.556 1.45 0.00 41.17 2.29
4904 11271 4.097361 GACTTGGGTCCCTCGGGC 62.097 72.222 10.00 0.00 36.53 6.13
4906 11273 2.660064 CCAGACTTGGGTCCCTCGG 61.660 68.421 10.00 0.00 43.05 4.63
4928 11295 2.744709 GCCGCCGTCCAGCTTAAA 60.745 61.111 0.00 0.00 0.00 1.52
4947 11314 3.232483 GACGGGCTAGGGTAGGGC 61.232 72.222 0.00 0.00 0.00 5.19
4951 11318 0.263765 AATGAGGACGGGCTAGGGTA 59.736 55.000 0.00 0.00 0.00 3.69
4955 11322 2.555199 CAAGAAATGAGGACGGGCTAG 58.445 52.381 0.00 0.00 0.00 3.42
4961 11328 2.275318 GAGAGGCAAGAAATGAGGACG 58.725 52.381 0.00 0.00 0.00 4.79
4966 11333 2.092212 GGGATGGAGAGGCAAGAAATGA 60.092 50.000 0.00 0.00 0.00 2.57
4975 11342 3.237741 CGGAGGGGATGGAGAGGC 61.238 72.222 0.00 0.00 0.00 4.70
4976 11343 3.237741 GCGGAGGGGATGGAGAGG 61.238 72.222 0.00 0.00 0.00 3.69
4994 11361 0.532862 AGGATTAGAATGTGGCGGCG 60.533 55.000 0.51 0.51 0.00 6.46
5013 11380 2.138179 GGTATGGCTAGTGGCGGGA 61.138 63.158 0.00 0.00 42.94 5.14
5020 11387 1.214673 TGAGACCTCGGTATGGCTAGT 59.785 52.381 0.00 0.00 0.00 2.57
5021 11388 1.883275 CTGAGACCTCGGTATGGCTAG 59.117 57.143 0.00 0.00 0.00 3.42
5029 11396 2.414994 TCGTAATCTGAGACCTCGGT 57.585 50.000 5.82 0.00 37.27 4.69
5031 11398 5.724496 GCGTATATCGTAATCTGAGACCTCG 60.724 48.000 0.00 0.00 42.13 4.63
5037 11404 6.556212 AGAATGGCGTATATCGTAATCTGAG 58.444 40.000 0.00 0.00 42.13 3.35
5038 11405 6.150474 TGAGAATGGCGTATATCGTAATCTGA 59.850 38.462 0.00 0.00 42.13 3.27
5041 11408 6.291849 GCATGAGAATGGCGTATATCGTAATC 60.292 42.308 0.00 0.00 42.13 1.75
5044 11411 4.421058 GCATGAGAATGGCGTATATCGTA 58.579 43.478 0.00 0.00 42.13 3.43
5045 11412 3.254060 GCATGAGAATGGCGTATATCGT 58.746 45.455 0.00 0.00 42.13 3.73
5046 11413 2.604914 GGCATGAGAATGGCGTATATCG 59.395 50.000 0.00 0.00 43.12 2.92
5054 11421 1.153086 ACTCCGGCATGAGAATGGC 60.153 57.895 8.55 2.39 42.85 4.40
5072 11439 2.759973 AAGGATCTCGAGCCGCCA 60.760 61.111 7.81 0.00 42.82 5.69
5077 11444 1.299773 CCGCTCAAGGATCTCGAGC 60.300 63.158 7.81 16.65 46.91 5.03
5149 11516 0.753479 TCCTCATCCGACTCTGGCTC 60.753 60.000 0.00 0.00 0.00 4.70
5162 11529 1.002662 TCTGCCTGCTCCTCCTCAT 59.997 57.895 0.00 0.00 0.00 2.90
5172 11539 1.739562 CACGTTCTCCTCTGCCTGC 60.740 63.158 0.00 0.00 0.00 4.85
5177 11544 1.469940 CCGGATTCACGTTCTCCTCTG 60.470 57.143 0.00 0.00 0.00 3.35
5178 11545 0.818296 CCGGATTCACGTTCTCCTCT 59.182 55.000 0.00 0.00 0.00 3.69
5185 11552 0.613853 TCCTCCTCCGGATTCACGTT 60.614 55.000 3.57 0.00 0.00 3.99
5186 11553 0.613853 TTCCTCCTCCGGATTCACGT 60.614 55.000 3.57 0.00 32.02 4.49
5187 11554 0.103208 CTTCCTCCTCCGGATTCACG 59.897 60.000 3.57 0.00 32.02 4.35
5188 11555 1.410882 CTCTTCCTCCTCCGGATTCAC 59.589 57.143 3.57 0.00 32.02 3.18
5189 11556 1.689575 CCTCTTCCTCCTCCGGATTCA 60.690 57.143 3.57 0.00 32.02 2.57
5190 11557 1.044611 CCTCTTCCTCCTCCGGATTC 58.955 60.000 3.57 0.00 32.02 2.52
5191 11558 0.340208 ACCTCTTCCTCCTCCGGATT 59.660 55.000 3.57 0.00 32.02 3.01
5192 11559 0.340208 AACCTCTTCCTCCTCCGGAT 59.660 55.000 3.57 0.00 32.02 4.18
5193 11560 0.614979 CAACCTCTTCCTCCTCCGGA 60.615 60.000 2.93 2.93 0.00 5.14
5194 11561 0.614979 TCAACCTCTTCCTCCTCCGG 60.615 60.000 0.00 0.00 0.00 5.14
5195 11562 1.267121 TTCAACCTCTTCCTCCTCCG 58.733 55.000 0.00 0.00 0.00 4.63
5196 11563 2.682269 GCATTCAACCTCTTCCTCCTCC 60.682 54.545 0.00 0.00 0.00 4.30
5197 11564 2.637947 GCATTCAACCTCTTCCTCCTC 58.362 52.381 0.00 0.00 0.00 3.71
5198 11565 1.065854 CGCATTCAACCTCTTCCTCCT 60.066 52.381 0.00 0.00 0.00 3.69
5199 11566 1.066143 TCGCATTCAACCTCTTCCTCC 60.066 52.381 0.00 0.00 0.00 4.30
5200 11567 2.275318 CTCGCATTCAACCTCTTCCTC 58.725 52.381 0.00 0.00 0.00 3.71
5201 11568 1.065854 CCTCGCATTCAACCTCTTCCT 60.066 52.381 0.00 0.00 0.00 3.36
5202 11569 1.373570 CCTCGCATTCAACCTCTTCC 58.626 55.000 0.00 0.00 0.00 3.46
5203 11570 0.729690 GCCTCGCATTCAACCTCTTC 59.270 55.000 0.00 0.00 0.00 2.87
5204 11571 0.326264 AGCCTCGCATTCAACCTCTT 59.674 50.000 0.00 0.00 0.00 2.85
5205 11572 1.986413 AGCCTCGCATTCAACCTCT 59.014 52.632 0.00 0.00 0.00 3.69
5206 11573 4.625800 AGCCTCGCATTCAACCTC 57.374 55.556 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.