Multiple sequence alignment - TraesCS5D01G140700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G140700 chr5D 100.000 5169 0 0 1 5169 224329774 224324606 0.000000e+00 9546.0
1 TraesCS5D01G140700 chr5D 85.623 626 90 0 4544 5169 374666891 374666266 0.000000e+00 658.0
2 TraesCS5D01G140700 chr5D 97.255 255 7 0 3 257 224346684 224346430 2.860000e-117 433.0
3 TraesCS5D01G140700 chr5D 85.714 245 28 3 421 661 203067949 203067708 8.590000e-63 252.0
4 TraesCS5D01G140700 chr5B 95.727 2621 76 12 693 3307 247057046 247059636 0.000000e+00 4187.0
5 TraesCS5D01G140700 chr5B 96.627 1186 31 3 3362 4541 247059630 247060812 0.000000e+00 1960.0
6 TraesCS5D01G140700 chr5B 84.897 629 91 4 4544 5169 153892244 153891617 2.630000e-177 632.0
7 TraesCS5D01G140700 chr5A 95.912 2128 63 10 719 2840 299069496 299067387 0.000000e+00 3426.0
8 TraesCS5D01G140700 chr5A 96.568 1719 44 6 2827 4541 299067366 299065659 0.000000e+00 2833.0
9 TraesCS5D01G140700 chr5A 86.364 242 26 4 421 658 526587526 526587764 1.850000e-64 257.0
10 TraesCS5D01G140700 chr3D 93.987 632 37 1 4538 5169 253513731 253513101 0.000000e+00 955.0
11 TraesCS5D01G140700 chr3D 98.039 255 5 0 3 257 396852564 396852818 1.320000e-120 444.0
12 TraesCS5D01G140700 chr3D 96.875 256 8 0 3 258 544455535 544455280 3.700000e-116 429.0
13 TraesCS5D01G140700 chr4B 91.534 626 52 1 4544 5169 74262461 74261837 0.000000e+00 861.0
14 TraesCS5D01G140700 chr4B 85.995 764 96 7 1273 2026 172772309 172773071 0.000000e+00 808.0
15 TraesCS5D01G140700 chr4B 90.805 174 16 0 2395 2568 172773470 172773643 3.110000e-57 233.0
16 TraesCS5D01G140700 chr4B 83.663 202 33 0 3104 3305 172775235 172775436 1.900000e-44 191.0
17 TraesCS5D01G140700 chr3B 91.534 626 51 2 4544 5169 447271077 447270454 0.000000e+00 861.0
18 TraesCS5D01G140700 chr4D 85.901 766 97 7 1271 2026 112192480 112193244 0.000000e+00 806.0
19 TraesCS5D01G140700 chr4D 97.233 253 7 0 3 255 469978241 469977989 3.700000e-116 429.0
20 TraesCS5D01G140700 chr4D 96.863 255 8 0 3 257 67694266 67694012 1.330000e-115 427.0
21 TraesCS5D01G140700 chr4D 88.506 174 20 0 2395 2568 112193682 112193855 1.460000e-50 211.0
22 TraesCS5D01G140700 chr4D 87.356 174 22 0 2656 2829 112194903 112195076 3.160000e-47 200.0
23 TraesCS5D01G140700 chr4D 84.158 202 32 0 3104 3305 112195405 112195606 4.080000e-46 196.0
24 TraesCS5D01G140700 chr4D 85.156 128 19 0 2910 3037 112195192 112195319 1.170000e-26 132.0
25 TraesCS5D01G140700 chr4A 85.264 794 104 9 1271 2053 464994184 464993393 0.000000e+00 806.0
26 TraesCS5D01G140700 chr4A 86.319 614 80 4 4546 5157 35571989 35572600 0.000000e+00 665.0
27 TraesCS5D01G140700 chr4A 86.722 241 25 4 421 657 597946702 597946939 1.430000e-65 261.0
28 TraesCS5D01G140700 chr4A 90.230 174 17 0 2395 2568 464993014 464992841 1.450000e-55 228.0
29 TraesCS5D01G140700 chr4A 87.571 177 22 0 2656 2832 464991639 464991463 6.780000e-49 206.0
30 TraesCS5D01G140700 chr2D 88.661 635 67 5 4536 5169 313761460 313760830 0.000000e+00 769.0
31 TraesCS5D01G140700 chr2D 98.039 255 5 0 3 257 235143313 235143567 1.320000e-120 444.0
32 TraesCS5D01G140700 chr2D 86.179 246 24 6 421 661 643828119 643827879 1.850000e-64 257.0
33 TraesCS5D01G140700 chr2D 89.286 84 9 0 2190 2273 77382274 77382191 7.080000e-19 106.0
34 TraesCS5D01G140700 chr1D 87.700 626 77 0 4544 5169 86515130 86514505 0.000000e+00 730.0
35 TraesCS5D01G140700 chr1D 96.863 255 8 0 3 257 125416968 125417222 1.330000e-115 427.0
36 TraesCS5D01G140700 chr7A 86.762 627 81 2 4544 5169 290623816 290623191 0.000000e+00 697.0
37 TraesCS5D01G140700 chr6D 97.255 255 7 0 3 257 257091963 257092217 2.860000e-117 433.0
38 TraesCS5D01G140700 chr7D 96.109 257 8 2 3 257 232651608 232651864 8.010000e-113 418.0
39 TraesCS5D01G140700 chr7D 86.531 245 26 4 421 661 441858637 441858396 3.970000e-66 263.0
40 TraesCS5D01G140700 chr6B 87.500 240 23 4 422 657 519723390 519723154 2.370000e-68 270.0
41 TraesCS5D01G140700 chr7B 86.122 245 27 5 421 661 498255504 498255263 1.850000e-64 257.0
42 TraesCS5D01G140700 chr7B 97.222 36 1 0 2235 2270 84060371 84060406 1.550000e-05 62.1
43 TraesCS5D01G140700 chr2A 86.122 245 27 3 421 661 216602421 216602180 1.850000e-64 257.0
44 TraesCS5D01G140700 chr6A 86.307 241 26 3 422 658 81124655 81124892 6.640000e-64 255.0
45 TraesCS5D01G140700 chr2B 89.286 84 9 0 2190 2273 119632779 119632696 7.080000e-19 106.0
46 TraesCS5D01G140700 chr2B 84.524 84 11 2 2191 2273 736108953 736109035 1.190000e-11 82.4
47 TraesCS5D01G140700 chr2B 94.872 39 2 0 2235 2273 14598958 14598920 1.550000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G140700 chr5D 224324606 224329774 5168 True 9546.000000 9546 100.000000 1 5169 1 chr5D.!!$R2 5168
1 TraesCS5D01G140700 chr5D 374666266 374666891 625 True 658.000000 658 85.623000 4544 5169 1 chr5D.!!$R4 625
2 TraesCS5D01G140700 chr5B 247057046 247060812 3766 False 3073.500000 4187 96.177000 693 4541 2 chr5B.!!$F1 3848
3 TraesCS5D01G140700 chr5B 153891617 153892244 627 True 632.000000 632 84.897000 4544 5169 1 chr5B.!!$R1 625
4 TraesCS5D01G140700 chr5A 299065659 299069496 3837 True 3129.500000 3426 96.240000 719 4541 2 chr5A.!!$R1 3822
5 TraesCS5D01G140700 chr3D 253513101 253513731 630 True 955.000000 955 93.987000 4538 5169 1 chr3D.!!$R1 631
6 TraesCS5D01G140700 chr4B 74261837 74262461 624 True 861.000000 861 91.534000 4544 5169 1 chr4B.!!$R1 625
7 TraesCS5D01G140700 chr4B 172772309 172775436 3127 False 410.666667 808 86.821000 1273 3305 3 chr4B.!!$F1 2032
8 TraesCS5D01G140700 chr3B 447270454 447271077 623 True 861.000000 861 91.534000 4544 5169 1 chr3B.!!$R1 625
9 TraesCS5D01G140700 chr4D 112192480 112195606 3126 False 309.000000 806 86.215400 1271 3305 5 chr4D.!!$F1 2034
10 TraesCS5D01G140700 chr4A 35571989 35572600 611 False 665.000000 665 86.319000 4546 5157 1 chr4A.!!$F1 611
11 TraesCS5D01G140700 chr4A 464991463 464994184 2721 True 413.333333 806 87.688333 1271 2832 3 chr4A.!!$R1 1561
12 TraesCS5D01G140700 chr2D 313760830 313761460 630 True 769.000000 769 88.661000 4536 5169 1 chr2D.!!$R2 633
13 TraesCS5D01G140700 chr1D 86514505 86515130 625 True 730.000000 730 87.700000 4544 5169 1 chr1D.!!$R1 625
14 TraesCS5D01G140700 chr7A 290623191 290623816 625 True 697.000000 697 86.762000 4544 5169 1 chr7A.!!$R1 625

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
135 136 0.031585 TCGTGTCTCTTTGTGTCCCG 59.968 55.0 0.00 0.0 0.00 5.14 F
136 137 0.031585 CGTGTCTCTTTGTGTCCCGA 59.968 55.0 0.00 0.0 0.00 5.14 F
371 372 0.038166 ACACCGTGCCCAGATCAAAT 59.962 50.0 0.00 0.0 0.00 2.32 F
714 715 0.254178 CACTGCACTGCTCCCCTATT 59.746 55.0 1.98 0.0 0.00 1.73 F
716 717 0.254178 CTGCACTGCTCCCCTATTGT 59.746 55.0 1.98 0.0 0.00 2.71 F
717 718 0.698238 TGCACTGCTCCCCTATTGTT 59.302 50.0 1.98 0.0 0.00 2.83 F
2103 2118 0.956410 CGGACCTCGACAGTCTCACT 60.956 60.0 9.95 0.0 42.43 3.41 F
2856 4568 0.981277 TCCACCTTAGCTAGCCCACC 60.981 60.0 12.13 0.0 0.00 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1296 1302 1.307084 GCCCTGGTAGAAGTCCCCT 60.307 63.158 0.0 0.0 0.00 4.79 R
2293 2380 0.620556 AGTGATGGTGGTAGCCAAGG 59.379 55.000 0.0 0.0 42.48 3.61 R
2581 3817 4.888326 AAGAGAAGCAAGTGAGAGACAT 57.112 40.909 0.0 0.0 0.00 3.06 R
2606 3842 1.711206 GCCGTGTTTGGAGACTACTC 58.289 55.000 0.0 0.0 41.94 2.59 R
2856 4568 6.638063 CAGACATGATTAAAACTTGTGTGTGG 59.362 38.462 0.0 0.0 34.51 4.17 R
3019 4732 5.243730 TGAAAGCATCCTAACCTTTTTCTGG 59.756 40.000 0.0 0.0 0.00 3.86 R
3308 5042 0.462581 GCAATCCGGCAGATGTGAGA 60.463 55.000 0.0 0.0 34.56 3.27 R
4588 6391 0.818445 TTTAGGGCGTTGCGGAAACA 60.818 50.000 0.0 0.0 38.84 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.849294 AACTCAGGAGGCTGTTCTTC 57.151 50.000 0.00 0.00 0.00 2.87
20 21 0.980423 ACTCAGGAGGCTGTTCTTCC 59.020 55.000 0.00 0.00 0.00 3.46
21 22 0.251634 CTCAGGAGGCTGTTCTTCCC 59.748 60.000 0.00 0.00 0.00 3.97
22 23 0.178891 TCAGGAGGCTGTTCTTCCCT 60.179 55.000 0.00 0.00 0.00 4.20
23 24 0.695347 CAGGAGGCTGTTCTTCCCTT 59.305 55.000 0.00 0.00 0.00 3.95
24 25 0.695347 AGGAGGCTGTTCTTCCCTTG 59.305 55.000 0.00 0.00 0.00 3.61
25 26 0.402121 GGAGGCTGTTCTTCCCTTGT 59.598 55.000 0.00 0.00 0.00 3.16
26 27 1.628846 GGAGGCTGTTCTTCCCTTGTA 59.371 52.381 0.00 0.00 0.00 2.41
27 28 2.615747 GGAGGCTGTTCTTCCCTTGTAC 60.616 54.545 0.00 0.00 0.00 2.90
28 29 2.303311 GAGGCTGTTCTTCCCTTGTACT 59.697 50.000 0.00 0.00 0.00 2.73
29 30 2.039084 AGGCTGTTCTTCCCTTGTACTG 59.961 50.000 0.00 0.00 0.00 2.74
30 31 2.224548 GGCTGTTCTTCCCTTGTACTGT 60.225 50.000 0.00 0.00 0.00 3.55
31 32 3.477530 GCTGTTCTTCCCTTGTACTGTT 58.522 45.455 0.00 0.00 0.00 3.16
32 33 3.498777 GCTGTTCTTCCCTTGTACTGTTC 59.501 47.826 0.00 0.00 0.00 3.18
33 34 4.703897 CTGTTCTTCCCTTGTACTGTTCA 58.296 43.478 0.00 0.00 0.00 3.18
34 35 5.304686 TGTTCTTCCCTTGTACTGTTCAT 57.695 39.130 0.00 0.00 0.00 2.57
35 36 5.305585 TGTTCTTCCCTTGTACTGTTCATC 58.694 41.667 0.00 0.00 0.00 2.92
36 37 5.163248 TGTTCTTCCCTTGTACTGTTCATCA 60.163 40.000 0.00 0.00 0.00 3.07
37 38 5.762179 TCTTCCCTTGTACTGTTCATCAT 57.238 39.130 0.00 0.00 0.00 2.45
38 39 5.734720 TCTTCCCTTGTACTGTTCATCATC 58.265 41.667 0.00 0.00 0.00 2.92
39 40 5.248248 TCTTCCCTTGTACTGTTCATCATCA 59.752 40.000 0.00 0.00 0.00 3.07
40 41 5.089970 TCCCTTGTACTGTTCATCATCAG 57.910 43.478 0.00 0.00 37.65 2.90
41 42 3.624861 CCCTTGTACTGTTCATCATCAGC 59.375 47.826 0.00 0.00 35.37 4.26
42 43 3.624861 CCTTGTACTGTTCATCATCAGCC 59.375 47.826 0.00 0.00 35.37 4.85
43 44 3.266510 TGTACTGTTCATCATCAGCCC 57.733 47.619 0.00 0.00 35.37 5.19
44 45 2.840038 TGTACTGTTCATCATCAGCCCT 59.160 45.455 0.00 0.00 35.37 5.19
45 46 4.030216 TGTACTGTTCATCATCAGCCCTA 58.970 43.478 0.00 0.00 35.37 3.53
46 47 3.834489 ACTGTTCATCATCAGCCCTAG 57.166 47.619 0.00 0.00 35.37 3.02
47 48 3.378512 ACTGTTCATCATCAGCCCTAGA 58.621 45.455 0.00 0.00 35.37 2.43
48 49 3.387374 ACTGTTCATCATCAGCCCTAGAG 59.613 47.826 0.00 0.00 35.37 2.43
49 50 2.702478 TGTTCATCATCAGCCCTAGAGG 59.298 50.000 0.00 0.00 39.47 3.69
59 60 2.620234 CCCTAGAGGCAATCCACCA 58.380 57.895 0.00 0.00 33.74 4.17
60 61 0.181350 CCCTAGAGGCAATCCACCAC 59.819 60.000 0.00 0.00 33.74 4.16
61 62 0.181350 CCTAGAGGCAATCCACCACC 59.819 60.000 0.00 0.00 33.74 4.61
62 63 0.911769 CTAGAGGCAATCCACCACCA 59.088 55.000 0.00 0.00 33.74 4.17
63 64 0.618458 TAGAGGCAATCCACCACCAC 59.382 55.000 0.00 0.00 33.74 4.16
64 65 1.678970 GAGGCAATCCACCACCACC 60.679 63.158 0.00 0.00 33.74 4.61
65 66 2.117206 GGCAATCCACCACCACCA 59.883 61.111 0.00 0.00 0.00 4.17
66 67 2.275380 GGCAATCCACCACCACCAC 61.275 63.158 0.00 0.00 0.00 4.16
67 68 1.530419 GCAATCCACCACCACCACA 60.530 57.895 0.00 0.00 0.00 4.17
68 69 1.805428 GCAATCCACCACCACCACAC 61.805 60.000 0.00 0.00 0.00 3.82
69 70 0.178992 CAATCCACCACCACCACACT 60.179 55.000 0.00 0.00 0.00 3.55
70 71 0.178992 AATCCACCACCACCACACTG 60.179 55.000 0.00 0.00 0.00 3.66
71 72 2.067932 ATCCACCACCACCACACTGG 62.068 60.000 0.00 0.00 45.02 4.00
72 73 2.751731 CCACCACCACCACACTGGA 61.752 63.158 0.00 0.00 40.96 3.86
73 74 1.227943 CACCACCACCACACTGGAG 60.228 63.158 0.00 0.00 40.96 3.86
74 75 1.692749 ACCACCACCACACTGGAGT 60.693 57.895 0.00 0.00 40.96 3.85
75 76 0.399376 ACCACCACCACACTGGAGTA 60.399 55.000 0.00 0.00 40.96 2.59
76 77 0.321671 CCACCACCACACTGGAGTAG 59.678 60.000 0.00 0.00 40.96 2.57
77 78 0.321671 CACCACCACACTGGAGTAGG 59.678 60.000 0.00 0.00 40.96 3.18
78 79 0.836400 ACCACCACACTGGAGTAGGG 60.836 60.000 0.00 0.00 40.96 3.53
79 80 0.836400 CCACCACACTGGAGTAGGGT 60.836 60.000 0.00 0.00 46.36 4.34
80 81 1.551560 CCACCACACTGGAGTAGGGTA 60.552 57.143 0.00 0.00 42.52 3.69
81 82 2.467880 CACCACACTGGAGTAGGGTAT 58.532 52.381 0.00 0.00 42.52 2.73
82 83 2.838202 CACCACACTGGAGTAGGGTATT 59.162 50.000 0.00 0.00 42.52 1.89
83 84 4.028131 CACCACACTGGAGTAGGGTATTA 58.972 47.826 0.00 0.00 42.52 0.98
84 85 4.028825 ACCACACTGGAGTAGGGTATTAC 58.971 47.826 0.00 0.00 42.52 1.89
85 86 4.028131 CCACACTGGAGTAGGGTATTACA 58.972 47.826 0.00 0.00 42.52 2.41
86 87 4.142004 CCACACTGGAGTAGGGTATTACAC 60.142 50.000 0.00 0.00 42.52 2.90
87 88 4.028825 ACACTGGAGTAGGGTATTACACC 58.971 47.826 0.00 0.00 42.62 4.16
104 105 2.415426 CACAACGGTGGCCCAAAC 59.585 61.111 4.97 0.00 41.45 2.93
105 106 2.835895 ACAACGGTGGCCCAAACC 60.836 61.111 4.97 0.00 0.00 3.27
106 107 2.835431 CAACGGTGGCCCAAACCA 60.835 61.111 11.10 0.00 37.57 3.67
107 108 2.520741 AACGGTGGCCCAAACCAG 60.521 61.111 11.10 6.35 41.46 4.00
108 109 3.367907 AACGGTGGCCCAAACCAGT 62.368 57.895 11.10 6.91 41.46 4.00
109 110 1.997256 AACGGTGGCCCAAACCAGTA 61.997 55.000 11.10 0.00 41.46 2.74
110 111 1.001393 CGGTGGCCCAAACCAGTAT 60.001 57.895 11.10 0.00 41.46 2.12
111 112 0.253610 CGGTGGCCCAAACCAGTATA 59.746 55.000 11.10 0.00 41.46 1.47
112 113 1.340211 CGGTGGCCCAAACCAGTATAA 60.340 52.381 11.10 0.00 41.46 0.98
113 114 2.810164 GGTGGCCCAAACCAGTATAAA 58.190 47.619 0.00 0.00 41.46 1.40
114 115 3.371034 GGTGGCCCAAACCAGTATAAAT 58.629 45.455 0.00 0.00 41.46 1.40
115 116 3.383505 GGTGGCCCAAACCAGTATAAATC 59.616 47.826 0.00 0.00 41.46 2.17
116 117 4.278310 GTGGCCCAAACCAGTATAAATCT 58.722 43.478 0.00 0.00 41.46 2.40
117 118 4.338400 GTGGCCCAAACCAGTATAAATCTC 59.662 45.833 0.00 0.00 41.46 2.75
118 119 3.564225 GGCCCAAACCAGTATAAATCTCG 59.436 47.826 0.00 0.00 0.00 4.04
119 120 4.196971 GCCCAAACCAGTATAAATCTCGT 58.803 43.478 0.00 0.00 0.00 4.18
120 121 4.035208 GCCCAAACCAGTATAAATCTCGTG 59.965 45.833 0.00 0.00 0.00 4.35
121 122 5.183228 CCCAAACCAGTATAAATCTCGTGT 58.817 41.667 0.00 0.00 0.00 4.49
122 123 5.293569 CCCAAACCAGTATAAATCTCGTGTC 59.706 44.000 0.00 0.00 0.00 3.67
123 124 6.106673 CCAAACCAGTATAAATCTCGTGTCT 58.893 40.000 0.00 0.00 0.00 3.41
124 125 6.255887 CCAAACCAGTATAAATCTCGTGTCTC 59.744 42.308 0.00 0.00 0.00 3.36
125 126 6.777213 AACCAGTATAAATCTCGTGTCTCT 57.223 37.500 0.00 0.00 0.00 3.10
126 127 6.777213 ACCAGTATAAATCTCGTGTCTCTT 57.223 37.500 0.00 0.00 0.00 2.85
127 128 7.171630 ACCAGTATAAATCTCGTGTCTCTTT 57.828 36.000 0.00 0.00 0.00 2.52
128 129 7.036220 ACCAGTATAAATCTCGTGTCTCTTTG 58.964 38.462 0.00 0.00 0.00 2.77
129 130 7.036220 CCAGTATAAATCTCGTGTCTCTTTGT 58.964 38.462 0.00 0.00 0.00 2.83
130 131 7.009631 CCAGTATAAATCTCGTGTCTCTTTGTG 59.990 40.741 0.00 0.00 0.00 3.33
131 132 7.542477 CAGTATAAATCTCGTGTCTCTTTGTGT 59.458 37.037 0.00 0.00 0.00 3.72
132 133 6.952935 ATAAATCTCGTGTCTCTTTGTGTC 57.047 37.500 0.00 0.00 0.00 3.67
133 134 2.795175 TCTCGTGTCTCTTTGTGTCC 57.205 50.000 0.00 0.00 0.00 4.02
134 135 1.340248 TCTCGTGTCTCTTTGTGTCCC 59.660 52.381 0.00 0.00 0.00 4.46
135 136 0.031585 TCGTGTCTCTTTGTGTCCCG 59.968 55.000 0.00 0.00 0.00 5.14
136 137 0.031585 CGTGTCTCTTTGTGTCCCGA 59.968 55.000 0.00 0.00 0.00 5.14
137 138 1.784525 GTGTCTCTTTGTGTCCCGAG 58.215 55.000 0.00 0.00 0.00 4.63
138 139 1.068741 GTGTCTCTTTGTGTCCCGAGT 59.931 52.381 0.00 0.00 0.00 4.18
139 140 1.760613 TGTCTCTTTGTGTCCCGAGTT 59.239 47.619 0.00 0.00 0.00 3.01
140 141 2.223971 TGTCTCTTTGTGTCCCGAGTTC 60.224 50.000 0.00 0.00 0.00 3.01
141 142 1.000607 TCTCTTTGTGTCCCGAGTTCG 60.001 52.381 0.00 0.00 39.44 3.95
142 143 0.748450 TCTTTGTGTCCCGAGTTCGT 59.252 50.000 0.48 0.00 37.74 3.85
143 144 1.137513 CTTTGTGTCCCGAGTTCGTC 58.862 55.000 0.48 0.00 37.74 4.20
153 154 2.998753 GAGTTCGTCGAGTTCGTCC 58.001 57.895 1.07 0.00 40.80 4.79
154 155 0.788645 GAGTTCGTCGAGTTCGTCCG 60.789 60.000 1.07 5.85 40.80 4.79
155 156 2.127118 TTCGTCGAGTTCGTCCGC 60.127 61.111 1.07 0.00 40.80 5.54
156 157 3.916371 TTCGTCGAGTTCGTCCGCG 62.916 63.158 0.00 0.00 40.80 6.46
157 158 4.434938 CGTCGAGTTCGTCCGCGA 62.435 66.667 8.23 0.00 46.36 5.87
166 167 1.647629 TCGTCCGCGAGATCTTAGC 59.352 57.895 8.23 12.46 42.81 3.09
174 175 2.923643 GCGAGATCTTAGCGAGTTAGG 58.076 52.381 6.49 0.00 0.00 2.69
175 176 2.350964 GCGAGATCTTAGCGAGTTAGGG 60.351 54.545 6.49 0.00 0.00 3.53
176 177 2.350964 CGAGATCTTAGCGAGTTAGGGC 60.351 54.545 0.00 0.00 0.00 5.19
177 178 1.609555 AGATCTTAGCGAGTTAGGGCG 59.390 52.381 0.00 0.00 0.00 6.13
178 179 1.337387 GATCTTAGCGAGTTAGGGCGT 59.663 52.381 0.00 0.00 0.00 5.68
179 180 2.042686 TCTTAGCGAGTTAGGGCGTA 57.957 50.000 0.00 0.00 0.00 4.42
180 181 1.945394 TCTTAGCGAGTTAGGGCGTAG 59.055 52.381 0.00 0.00 0.00 3.51
181 182 1.945394 CTTAGCGAGTTAGGGCGTAGA 59.055 52.381 0.00 0.00 0.00 2.59
182 183 2.267174 TAGCGAGTTAGGGCGTAGAT 57.733 50.000 0.00 0.00 0.00 1.98
183 184 0.953003 AGCGAGTTAGGGCGTAGATC 59.047 55.000 0.00 0.00 0.00 2.75
184 185 0.385723 GCGAGTTAGGGCGTAGATCG 60.386 60.000 14.77 14.77 43.12 3.69
185 186 0.237761 CGAGTTAGGGCGTAGATCGG 59.762 60.000 12.49 0.00 40.26 4.18
186 187 1.316651 GAGTTAGGGCGTAGATCGGT 58.683 55.000 0.00 0.00 40.26 4.69
187 188 2.498167 GAGTTAGGGCGTAGATCGGTA 58.502 52.381 0.00 0.00 40.26 4.02
188 189 2.483491 GAGTTAGGGCGTAGATCGGTAG 59.517 54.545 0.00 0.00 40.26 3.18
189 190 1.538950 GTTAGGGCGTAGATCGGTAGG 59.461 57.143 0.00 0.00 40.26 3.18
190 191 1.059098 TAGGGCGTAGATCGGTAGGA 58.941 55.000 0.00 0.00 40.26 2.94
191 192 0.250814 AGGGCGTAGATCGGTAGGAG 60.251 60.000 0.00 0.00 40.26 3.69
192 193 1.242665 GGGCGTAGATCGGTAGGAGG 61.243 65.000 0.00 0.00 40.26 4.30
193 194 1.242665 GGCGTAGATCGGTAGGAGGG 61.243 65.000 0.00 0.00 40.26 4.30
194 195 0.250640 GCGTAGATCGGTAGGAGGGA 60.251 60.000 0.00 0.00 40.26 4.20
195 196 1.816961 GCGTAGATCGGTAGGAGGGAA 60.817 57.143 0.00 0.00 40.26 3.97
196 197 2.579873 CGTAGATCGGTAGGAGGGAAA 58.420 52.381 0.00 0.00 35.71 3.13
197 198 2.553172 CGTAGATCGGTAGGAGGGAAAG 59.447 54.545 0.00 0.00 35.71 2.62
198 199 3.746751 CGTAGATCGGTAGGAGGGAAAGA 60.747 52.174 0.00 0.00 35.71 2.52
199 200 2.668625 AGATCGGTAGGAGGGAAAGAC 58.331 52.381 0.00 0.00 0.00 3.01
200 201 2.245287 AGATCGGTAGGAGGGAAAGACT 59.755 50.000 0.00 0.00 0.00 3.24
201 202 2.617840 TCGGTAGGAGGGAAAGACTT 57.382 50.000 0.00 0.00 0.00 3.01
202 203 2.454538 TCGGTAGGAGGGAAAGACTTC 58.545 52.381 0.00 0.00 0.00 3.01
203 204 1.134560 CGGTAGGAGGGAAAGACTTCG 59.865 57.143 0.00 0.00 31.77 3.79
204 205 1.134759 GGTAGGAGGGAAAGACTTCGC 60.135 57.143 0.00 0.00 43.17 4.70
205 206 0.815734 TAGGAGGGAAAGACTTCGCG 59.184 55.000 0.00 0.00 46.40 5.87
206 207 1.186267 AGGAGGGAAAGACTTCGCGT 61.186 55.000 5.77 0.00 46.40 6.01
207 208 1.014564 GGAGGGAAAGACTTCGCGTG 61.015 60.000 5.77 2.81 46.40 5.34
208 209 1.627550 GAGGGAAAGACTTCGCGTGC 61.628 60.000 5.77 0.00 46.40 5.34
209 210 1.959226 GGGAAAGACTTCGCGTGCA 60.959 57.895 5.77 0.00 35.12 4.57
210 211 1.204312 GGAAAGACTTCGCGTGCAC 59.796 57.895 6.82 6.82 31.77 4.57
211 212 1.204312 GAAAGACTTCGCGTGCACC 59.796 57.895 12.15 3.09 0.00 5.01
212 213 2.171489 GAAAGACTTCGCGTGCACCC 62.171 60.000 12.15 0.07 0.00 4.61
213 214 4.681978 AGACTTCGCGTGCACCCC 62.682 66.667 12.15 1.28 0.00 4.95
214 215 4.980805 GACTTCGCGTGCACCCCA 62.981 66.667 12.15 0.00 0.00 4.96
215 216 4.988598 ACTTCGCGTGCACCCCAG 62.989 66.667 12.15 4.88 0.00 4.45
216 217 4.988598 CTTCGCGTGCACCCCAGT 62.989 66.667 12.15 0.00 0.00 4.00
220 221 3.660111 GCGTGCACCCCAGTGTTC 61.660 66.667 12.15 0.00 46.35 3.18
221 222 3.345808 CGTGCACCCCAGTGTTCG 61.346 66.667 12.15 0.00 46.35 3.95
222 223 2.110213 GTGCACCCCAGTGTTCGA 59.890 61.111 5.22 0.00 46.35 3.71
223 224 1.525077 GTGCACCCCAGTGTTCGAA 60.525 57.895 5.22 0.00 46.35 3.71
224 225 1.525077 TGCACCCCAGTGTTCGAAC 60.525 57.895 21.42 21.42 46.35 3.95
225 226 2.258726 GCACCCCAGTGTTCGAACC 61.259 63.158 24.78 15.84 46.35 3.62
226 227 1.450211 CACCCCAGTGTTCGAACCT 59.550 57.895 24.78 17.73 39.30 3.50
227 228 0.179029 CACCCCAGTGTTCGAACCTT 60.179 55.000 24.78 10.58 39.30 3.50
228 229 1.071071 CACCCCAGTGTTCGAACCTTA 59.929 52.381 24.78 4.16 39.30 2.69
229 230 1.770061 ACCCCAGTGTTCGAACCTTAA 59.230 47.619 24.78 3.77 0.00 1.85
230 231 2.224450 ACCCCAGTGTTCGAACCTTAAG 60.224 50.000 24.78 11.88 0.00 1.85
231 232 2.423577 CCCAGTGTTCGAACCTTAAGG 58.576 52.381 24.78 20.42 42.17 2.69
232 233 2.423577 CCAGTGTTCGAACCTTAAGGG 58.576 52.381 25.31 13.92 40.27 3.95
242 243 3.349879 CCTTAAGGGTTTGCCGGAA 57.650 52.632 14.25 0.00 34.97 4.30
243 244 0.885879 CCTTAAGGGTTTGCCGGAAC 59.114 55.000 14.25 0.29 34.97 3.62
244 245 0.885879 CTTAAGGGTTTGCCGGAACC 59.114 55.000 15.21 15.21 46.70 3.62
248 249 3.299977 GGTTTGCCGGAACCCCAC 61.300 66.667 5.05 0.00 42.63 4.61
249 250 2.519780 GTTTGCCGGAACCCCACA 60.520 61.111 5.05 0.00 0.00 4.17
250 251 1.906333 GTTTGCCGGAACCCCACAT 60.906 57.895 5.05 0.00 0.00 3.21
251 252 1.605165 TTTGCCGGAACCCCACATC 60.605 57.895 5.05 0.00 0.00 3.06
252 253 3.577334 TTGCCGGAACCCCACATCC 62.577 63.158 5.05 0.00 0.00 3.51
256 257 3.074281 GGAACCCCACATCCGACA 58.926 61.111 0.00 0.00 0.00 4.35
257 258 1.376812 GGAACCCCACATCCGACAC 60.377 63.158 0.00 0.00 0.00 3.67
258 259 1.376812 GAACCCCACATCCGACACC 60.377 63.158 0.00 0.00 0.00 4.16
259 260 3.248446 AACCCCACATCCGACACCG 62.248 63.158 0.00 0.00 0.00 4.94
271 272 4.647825 ACACCGGTGTCAGCAAAA 57.352 50.000 34.41 0.00 40.24 2.44
272 273 2.875188 ACACCGGTGTCAGCAAAAA 58.125 47.368 34.41 0.00 40.24 1.94
273 274 1.398692 ACACCGGTGTCAGCAAAAAT 58.601 45.000 34.41 7.89 40.24 1.82
274 275 1.066908 ACACCGGTGTCAGCAAAAATG 59.933 47.619 34.41 6.34 40.24 2.32
275 276 1.066908 CACCGGTGTCAGCAAAAATGT 59.933 47.619 26.95 0.00 0.00 2.71
276 277 1.066908 ACCGGTGTCAGCAAAAATGTG 59.933 47.619 6.12 0.00 0.00 3.21
277 278 1.130955 CGGTGTCAGCAAAAATGTGC 58.869 50.000 2.47 0.00 45.28 4.57
283 284 2.355718 GCAAAAATGTGCGCCGGT 60.356 55.556 4.18 0.00 34.21 5.28
284 285 2.371923 GCAAAAATGTGCGCCGGTC 61.372 57.895 4.18 0.00 34.21 4.79
285 286 2.080062 CAAAAATGTGCGCCGGTCG 61.080 57.895 4.18 12.98 42.12 4.79
295 296 2.746277 GCCGGTCGCAACATCCTT 60.746 61.111 1.90 0.00 37.47 3.36
296 297 3.039202 GCCGGTCGCAACATCCTTG 62.039 63.158 1.90 0.00 37.47 3.61
297 298 1.375396 CCGGTCGCAACATCCTTGA 60.375 57.895 0.00 0.00 0.00 3.02
298 299 1.361668 CCGGTCGCAACATCCTTGAG 61.362 60.000 0.00 0.00 0.00 3.02
299 300 1.361668 CGGTCGCAACATCCTTGAGG 61.362 60.000 0.00 0.00 0.00 3.86
300 301 1.648467 GGTCGCAACATCCTTGAGGC 61.648 60.000 0.00 0.00 34.44 4.70
301 302 1.741401 TCGCAACATCCTTGAGGCG 60.741 57.895 0.00 0.00 44.32 5.52
302 303 2.034879 CGCAACATCCTTGAGGCGT 61.035 57.895 0.00 0.00 40.95 5.68
303 304 1.503542 GCAACATCCTTGAGGCGTG 59.496 57.895 0.00 0.00 34.44 5.34
304 305 1.503542 CAACATCCTTGAGGCGTGC 59.496 57.895 0.00 0.00 34.44 5.34
305 306 0.957395 CAACATCCTTGAGGCGTGCT 60.957 55.000 0.00 0.00 34.44 4.40
306 307 0.674895 AACATCCTTGAGGCGTGCTC 60.675 55.000 0.00 0.00 34.44 4.26
307 308 2.169789 CATCCTTGAGGCGTGCTCG 61.170 63.158 3.31 3.31 40.37 5.03
308 309 3.376935 ATCCTTGAGGCGTGCTCGG 62.377 63.158 10.52 0.00 37.56 4.63
327 328 2.253154 CGTGTGGTGCTCGTCGTA 59.747 61.111 0.00 0.00 0.00 3.43
328 329 1.796355 CGTGTGGTGCTCGTCGTAG 60.796 63.158 0.00 0.00 0.00 3.51
329 330 2.087009 GTGTGGTGCTCGTCGTAGC 61.087 63.158 9.00 9.00 43.08 3.58
330 331 2.265904 TGTGGTGCTCGTCGTAGCT 61.266 57.895 14.74 0.00 43.19 3.32
331 332 1.514443 GTGGTGCTCGTCGTAGCTC 60.514 63.158 14.74 11.82 43.19 4.09
332 333 2.102553 GGTGCTCGTCGTAGCTCC 59.897 66.667 16.42 16.42 45.77 4.70
333 334 2.102553 GTGCTCGTCGTAGCTCCC 59.897 66.667 14.74 0.00 43.19 4.30
334 335 2.045242 TGCTCGTCGTAGCTCCCT 60.045 61.111 14.74 0.00 43.19 4.20
335 336 1.677966 TGCTCGTCGTAGCTCCCTT 60.678 57.895 14.74 0.00 43.19 3.95
336 337 1.248785 TGCTCGTCGTAGCTCCCTTT 61.249 55.000 14.74 0.00 43.19 3.11
337 338 0.802607 GCTCGTCGTAGCTCCCTTTG 60.803 60.000 0.00 0.00 39.50 2.77
338 339 0.526662 CTCGTCGTAGCTCCCTTTGT 59.473 55.000 0.00 0.00 0.00 2.83
339 340 0.524862 TCGTCGTAGCTCCCTTTGTC 59.475 55.000 0.00 0.00 0.00 3.18
340 341 0.797249 CGTCGTAGCTCCCTTTGTCG 60.797 60.000 0.00 0.00 0.00 4.35
341 342 1.077089 GTCGTAGCTCCCTTTGTCGC 61.077 60.000 0.00 0.00 0.00 5.19
342 343 1.810030 CGTAGCTCCCTTTGTCGCC 60.810 63.158 0.00 0.00 0.00 5.54
343 344 1.597461 GTAGCTCCCTTTGTCGCCT 59.403 57.895 0.00 0.00 0.00 5.52
344 345 0.460459 GTAGCTCCCTTTGTCGCCTC 60.460 60.000 0.00 0.00 0.00 4.70
345 346 0.614979 TAGCTCCCTTTGTCGCCTCT 60.615 55.000 0.00 0.00 0.00 3.69
346 347 1.003233 GCTCCCTTTGTCGCCTCTT 60.003 57.895 0.00 0.00 0.00 2.85
347 348 1.301677 GCTCCCTTTGTCGCCTCTTG 61.302 60.000 0.00 0.00 0.00 3.02
348 349 1.301677 CTCCCTTTGTCGCCTCTTGC 61.302 60.000 0.00 0.00 0.00 4.01
349 350 1.600636 CCCTTTGTCGCCTCTTGCA 60.601 57.895 0.00 0.00 41.33 4.08
350 351 1.580845 CCCTTTGTCGCCTCTTGCAG 61.581 60.000 0.00 0.00 41.33 4.41
351 352 1.208614 CTTTGTCGCCTCTTGCAGC 59.791 57.895 0.00 0.00 41.33 5.25
352 353 1.509644 CTTTGTCGCCTCTTGCAGCA 61.510 55.000 0.00 0.00 41.33 4.41
353 354 1.785041 TTTGTCGCCTCTTGCAGCAC 61.785 55.000 0.00 0.00 41.33 4.40
354 355 2.666190 GTCGCCTCTTGCAGCACA 60.666 61.111 0.00 0.00 41.33 4.57
355 356 2.666190 TCGCCTCTTGCAGCACAC 60.666 61.111 0.00 0.00 41.33 3.82
356 357 3.730761 CGCCTCTTGCAGCACACC 61.731 66.667 0.00 0.00 41.33 4.16
357 358 3.730761 GCCTCTTGCAGCACACCG 61.731 66.667 0.00 0.00 40.77 4.94
358 359 2.281070 CCTCTTGCAGCACACCGT 60.281 61.111 0.00 0.00 0.00 4.83
359 360 2.610694 CCTCTTGCAGCACACCGTG 61.611 63.158 0.00 0.00 36.51 4.94
368 369 2.347114 CACACCGTGCCCAGATCA 59.653 61.111 0.00 0.00 0.00 2.92
369 370 1.302431 CACACCGTGCCCAGATCAA 60.302 57.895 0.00 0.00 0.00 2.57
370 371 0.888736 CACACCGTGCCCAGATCAAA 60.889 55.000 0.00 0.00 0.00 2.69
371 372 0.038166 ACACCGTGCCCAGATCAAAT 59.962 50.000 0.00 0.00 0.00 2.32
372 373 0.734889 CACCGTGCCCAGATCAAATC 59.265 55.000 0.00 0.00 0.00 2.17
373 374 0.327924 ACCGTGCCCAGATCAAATCA 59.672 50.000 0.00 0.00 0.00 2.57
374 375 1.064463 ACCGTGCCCAGATCAAATCAT 60.064 47.619 0.00 0.00 0.00 2.45
375 376 2.172505 ACCGTGCCCAGATCAAATCATA 59.827 45.455 0.00 0.00 0.00 2.15
376 377 2.810274 CCGTGCCCAGATCAAATCATAG 59.190 50.000 0.00 0.00 0.00 2.23
377 378 3.494924 CCGTGCCCAGATCAAATCATAGA 60.495 47.826 0.00 0.00 0.00 1.98
378 379 4.129380 CGTGCCCAGATCAAATCATAGAA 58.871 43.478 0.00 0.00 0.00 2.10
379 380 4.758674 CGTGCCCAGATCAAATCATAGAAT 59.241 41.667 0.00 0.00 0.00 2.40
380 381 5.934043 CGTGCCCAGATCAAATCATAGAATA 59.066 40.000 0.00 0.00 0.00 1.75
381 382 6.128445 CGTGCCCAGATCAAATCATAGAATAC 60.128 42.308 0.00 0.00 0.00 1.89
382 383 6.939163 GTGCCCAGATCAAATCATAGAATACT 59.061 38.462 0.00 0.00 0.00 2.12
383 384 7.118971 GTGCCCAGATCAAATCATAGAATACTC 59.881 40.741 0.00 0.00 0.00 2.59
384 385 7.164122 GCCCAGATCAAATCATAGAATACTCA 58.836 38.462 0.00 0.00 0.00 3.41
385 386 7.333921 GCCCAGATCAAATCATAGAATACTCAG 59.666 40.741 0.00 0.00 0.00 3.35
386 387 7.823310 CCCAGATCAAATCATAGAATACTCAGG 59.177 40.741 0.00 0.00 0.00 3.86
387 388 7.823310 CCAGATCAAATCATAGAATACTCAGGG 59.177 40.741 0.00 0.00 0.00 4.45
388 389 8.373981 CAGATCAAATCATAGAATACTCAGGGT 58.626 37.037 0.00 0.00 0.00 4.34
389 390 8.943085 AGATCAAATCATAGAATACTCAGGGTT 58.057 33.333 0.00 0.00 0.00 4.11
392 393 9.213777 TCAAATCATAGAATACTCAGGGTTAGT 57.786 33.333 0.00 0.00 0.00 2.24
393 394 9.482627 CAAATCATAGAATACTCAGGGTTAGTC 57.517 37.037 0.00 0.00 0.00 2.59
394 395 7.784470 ATCATAGAATACTCAGGGTTAGTCC 57.216 40.000 0.00 0.00 0.00 3.85
395 396 6.679542 TCATAGAATACTCAGGGTTAGTCCA 58.320 40.000 0.00 0.00 38.11 4.02
396 397 7.306013 TCATAGAATACTCAGGGTTAGTCCAT 58.694 38.462 0.00 0.00 38.11 3.41
397 398 7.789831 TCATAGAATACTCAGGGTTAGTCCATT 59.210 37.037 0.00 0.00 38.11 3.16
398 399 6.240549 AGAATACTCAGGGTTAGTCCATTG 57.759 41.667 0.00 0.00 38.11 2.82
399 400 5.726793 AGAATACTCAGGGTTAGTCCATTGT 59.273 40.000 0.00 0.00 38.11 2.71
400 401 6.901300 AGAATACTCAGGGTTAGTCCATTGTA 59.099 38.462 0.00 0.00 38.11 2.41
401 402 7.402071 AGAATACTCAGGGTTAGTCCATTGTAA 59.598 37.037 0.00 0.00 38.11 2.41
402 403 5.836024 ACTCAGGGTTAGTCCATTGTAAA 57.164 39.130 0.00 0.00 38.11 2.01
403 404 5.557866 ACTCAGGGTTAGTCCATTGTAAAC 58.442 41.667 0.00 0.00 38.11 2.01
404 405 5.309806 ACTCAGGGTTAGTCCATTGTAAACT 59.690 40.000 0.00 0.00 38.11 2.66
405 406 6.183361 ACTCAGGGTTAGTCCATTGTAAACTT 60.183 38.462 0.00 0.00 38.11 2.66
406 407 6.235664 TCAGGGTTAGTCCATTGTAAACTTC 58.764 40.000 0.00 0.00 38.11 3.01
407 408 5.414765 CAGGGTTAGTCCATTGTAAACTTCC 59.585 44.000 0.00 0.00 38.11 3.46
408 409 5.312443 AGGGTTAGTCCATTGTAAACTTCCT 59.688 40.000 0.00 0.00 38.11 3.36
409 410 6.008331 GGGTTAGTCCATTGTAAACTTCCTT 58.992 40.000 0.00 0.00 38.11 3.36
410 411 7.017850 AGGGTTAGTCCATTGTAAACTTCCTTA 59.982 37.037 0.00 0.00 38.11 2.69
411 412 7.336176 GGGTTAGTCCATTGTAAACTTCCTTAG 59.664 40.741 0.00 0.00 38.11 2.18
412 413 7.336176 GGTTAGTCCATTGTAAACTTCCTTAGG 59.664 40.741 0.00 0.00 35.97 2.69
413 414 5.254115 AGTCCATTGTAAACTTCCTTAGGC 58.746 41.667 0.00 0.00 0.00 3.93
414 415 4.398358 GTCCATTGTAAACTTCCTTAGGCC 59.602 45.833 0.00 0.00 0.00 5.19
415 416 4.291249 TCCATTGTAAACTTCCTTAGGCCT 59.709 41.667 11.78 11.78 0.00 5.19
416 417 4.640647 CCATTGTAAACTTCCTTAGGCCTC 59.359 45.833 9.68 0.00 0.00 4.70
417 418 4.986054 TTGTAAACTTCCTTAGGCCTCA 57.014 40.909 9.68 0.00 0.00 3.86
418 419 5.514500 TTGTAAACTTCCTTAGGCCTCAT 57.486 39.130 9.68 0.00 0.00 2.90
419 420 5.099042 TGTAAACTTCCTTAGGCCTCATC 57.901 43.478 9.68 0.00 0.00 2.92
420 421 2.990066 AACTTCCTTAGGCCTCATCG 57.010 50.000 9.68 0.00 0.00 3.84
421 422 2.160721 ACTTCCTTAGGCCTCATCGA 57.839 50.000 9.68 0.00 0.00 3.59
422 423 2.035632 ACTTCCTTAGGCCTCATCGAG 58.964 52.381 9.68 6.15 0.00 4.04
435 436 4.569761 CTCATCGAGGATTTTCGTAGGA 57.430 45.455 0.00 0.00 41.22 2.94
436 437 4.933330 CTCATCGAGGATTTTCGTAGGAA 58.067 43.478 0.00 0.00 41.22 3.36
437 438 5.333299 TCATCGAGGATTTTCGTAGGAAA 57.667 39.130 6.50 6.50 41.22 3.13
451 452 8.767478 TTTCGTAGGAAAAGTATAGGAACAAG 57.233 34.615 8.10 0.00 39.14 3.16
452 453 7.472334 TCGTAGGAAAAGTATAGGAACAAGT 57.528 36.000 0.00 0.00 0.00 3.16
453 454 8.579850 TCGTAGGAAAAGTATAGGAACAAGTA 57.420 34.615 0.00 0.00 0.00 2.24
454 455 9.193806 TCGTAGGAAAAGTATAGGAACAAGTAT 57.806 33.333 0.00 0.00 0.00 2.12
490 491 8.771920 TTCTATATATGCATTCGGTTTGTAGG 57.228 34.615 3.54 0.00 0.00 3.18
491 492 8.129496 TCTATATATGCATTCGGTTTGTAGGA 57.871 34.615 3.54 0.00 0.00 2.94
492 493 8.590204 TCTATATATGCATTCGGTTTGTAGGAA 58.410 33.333 3.54 0.00 0.00 3.36
493 494 9.214957 CTATATATGCATTCGGTTTGTAGGAAA 57.785 33.333 3.54 0.00 0.00 3.13
494 495 6.959639 ATATGCATTCGGTTTGTAGGAAAT 57.040 33.333 3.54 0.00 0.00 2.17
495 496 9.733556 ATATATGCATTCGGTTTGTAGGAAATA 57.266 29.630 3.54 0.00 0.00 1.40
496 497 5.554822 TGCATTCGGTTTGTAGGAAATAC 57.445 39.130 0.00 0.00 34.72 1.89
497 498 5.004448 TGCATTCGGTTTGTAGGAAATACA 58.996 37.500 0.00 0.00 42.76 2.29
498 499 5.650266 TGCATTCGGTTTGTAGGAAATACAT 59.350 36.000 0.00 0.00 43.87 2.29
499 500 6.824196 TGCATTCGGTTTGTAGGAAATACATA 59.176 34.615 0.00 0.00 43.87 2.29
500 501 7.130269 GCATTCGGTTTGTAGGAAATACATAC 58.870 38.462 1.47 1.47 43.87 2.39
501 502 7.201661 GCATTCGGTTTGTAGGAAATACATACA 60.202 37.037 9.68 0.00 43.93 2.29
502 503 8.836413 CATTCGGTTTGTAGGAAATACATACAT 58.164 33.333 9.68 0.00 43.93 2.29
503 504 7.780008 TCGGTTTGTAGGAAATACATACATG 57.220 36.000 9.68 0.00 43.93 3.21
504 505 7.557724 TCGGTTTGTAGGAAATACATACATGA 58.442 34.615 0.00 5.41 43.93 3.07
505 506 8.041919 TCGGTTTGTAGGAAATACATACATGAA 58.958 33.333 0.00 0.00 43.93 2.57
506 507 8.836413 CGGTTTGTAGGAAATACATACATGAAT 58.164 33.333 0.00 0.00 43.93 2.57
511 512 9.607988 TGTAGGAAATACATACATGAATTTCGT 57.392 29.630 0.00 10.14 40.16 3.85
514 515 9.273016 AGGAAATACATACATGAATTTCGTAGG 57.727 33.333 0.00 0.00 0.00 3.18
515 516 9.268268 GGAAATACATACATGAATTTCGTAGGA 57.732 33.333 0.00 0.00 0.00 2.94
548 549 9.965824 TTCATTTTCTGTATTTCTGAAGGAAAC 57.034 29.630 0.00 0.00 45.29 2.78
549 550 9.354673 TCATTTTCTGTATTTCTGAAGGAAACT 57.645 29.630 0.00 0.00 45.29 2.66
552 553 9.621629 TTTTCTGTATTTCTGAAGGAAACTACA 57.378 29.630 0.00 0.00 45.29 2.74
553 554 9.793259 TTTCTGTATTTCTGAAGGAAACTACAT 57.207 29.630 0.00 0.00 45.29 2.29
557 558 9.832445 TGTATTTCTGAAGGAAACTACATATCC 57.168 33.333 0.00 0.00 45.29 2.59
558 559 9.832445 GTATTTCTGAAGGAAACTACATATCCA 57.168 33.333 0.00 0.00 45.29 3.41
559 560 8.738645 ATTTCTGAAGGAAACTACATATCCAC 57.261 34.615 0.00 0.00 45.29 4.02
560 561 7.496346 TTCTGAAGGAAACTACATATCCACT 57.504 36.000 0.00 0.00 42.68 4.00
561 562 7.113658 TCTGAAGGAAACTACATATCCACTC 57.886 40.000 0.00 0.00 42.68 3.51
562 563 6.667848 TCTGAAGGAAACTACATATCCACTCA 59.332 38.462 0.00 0.00 42.68 3.41
563 564 7.180229 TCTGAAGGAAACTACATATCCACTCAA 59.820 37.037 0.00 0.00 42.68 3.02
564 565 7.685481 TGAAGGAAACTACATATCCACTCAAA 58.315 34.615 0.00 0.00 42.68 2.69
565 566 8.160765 TGAAGGAAACTACATATCCACTCAAAA 58.839 33.333 0.00 0.00 42.68 2.44
566 567 7.923414 AGGAAACTACATATCCACTCAAAAC 57.077 36.000 0.00 0.00 40.61 2.43
567 568 7.458397 AGGAAACTACATATCCACTCAAAACA 58.542 34.615 0.00 0.00 40.61 2.83
568 569 7.390718 AGGAAACTACATATCCACTCAAAACAC 59.609 37.037 0.00 0.00 40.61 3.32
569 570 7.174253 GGAAACTACATATCCACTCAAAACACA 59.826 37.037 0.00 0.00 33.30 3.72
570 571 8.635765 AAACTACATATCCACTCAAAACACAT 57.364 30.769 0.00 0.00 0.00 3.21
571 572 8.635765 AACTACATATCCACTCAAAACACATT 57.364 30.769 0.00 0.00 0.00 2.71
572 573 8.635765 ACTACATATCCACTCAAAACACATTT 57.364 30.769 0.00 0.00 0.00 2.32
573 574 9.077885 ACTACATATCCACTCAAAACACATTTT 57.922 29.630 0.00 0.00 38.61 1.82
576 577 8.855110 ACATATCCACTCAAAACACATTTTACA 58.145 29.630 0.00 0.00 35.79 2.41
577 578 9.128107 CATATCCACTCAAAACACATTTTACAC 57.872 33.333 0.00 0.00 35.79 2.90
578 579 5.574082 TCCACTCAAAACACATTTTACACG 58.426 37.500 0.00 0.00 35.79 4.49
579 580 5.124138 TCCACTCAAAACACATTTTACACGT 59.876 36.000 0.00 0.00 35.79 4.49
580 581 6.315642 TCCACTCAAAACACATTTTACACGTA 59.684 34.615 0.00 0.00 35.79 3.57
581 582 6.631238 CCACTCAAAACACATTTTACACGTAG 59.369 38.462 0.00 0.00 35.79 3.51
582 583 6.631238 CACTCAAAACACATTTTACACGTAGG 59.369 38.462 0.00 0.00 35.79 3.18
583 584 6.539464 ACTCAAAACACATTTTACACGTAGGA 59.461 34.615 0.00 0.00 35.79 2.94
584 585 7.066043 ACTCAAAACACATTTTACACGTAGGAA 59.934 33.333 0.00 0.00 35.79 3.36
585 586 7.188157 TCAAAACACATTTTACACGTAGGAAC 58.812 34.615 0.00 0.00 35.79 3.62
586 587 6.680874 AAACACATTTTACACGTAGGAACA 57.319 33.333 0.00 0.00 0.00 3.18
587 588 6.680874 AACACATTTTACACGTAGGAACAA 57.319 33.333 0.00 0.00 0.00 2.83
588 589 6.295039 ACACATTTTACACGTAGGAACAAG 57.705 37.500 0.00 0.00 0.00 3.16
589 590 5.237779 ACACATTTTACACGTAGGAACAAGG 59.762 40.000 0.00 0.00 0.00 3.61
590 591 4.214758 ACATTTTACACGTAGGAACAAGGC 59.785 41.667 0.00 0.00 0.00 4.35
591 592 3.472283 TTTACACGTAGGAACAAGGCA 57.528 42.857 0.00 0.00 0.00 4.75
592 593 3.472283 TTACACGTAGGAACAAGGCAA 57.528 42.857 0.00 0.00 0.00 4.52
593 594 1.878953 ACACGTAGGAACAAGGCAAG 58.121 50.000 0.00 0.00 0.00 4.01
594 595 1.140252 ACACGTAGGAACAAGGCAAGT 59.860 47.619 0.00 0.00 0.00 3.16
595 596 1.798813 CACGTAGGAACAAGGCAAGTC 59.201 52.381 0.00 0.00 0.00 3.01
596 597 1.414919 ACGTAGGAACAAGGCAAGTCA 59.585 47.619 0.00 0.00 0.00 3.41
597 598 2.158871 ACGTAGGAACAAGGCAAGTCAA 60.159 45.455 0.00 0.00 0.00 3.18
598 599 3.074412 CGTAGGAACAAGGCAAGTCAAT 58.926 45.455 0.00 0.00 0.00 2.57
599 600 3.502211 CGTAGGAACAAGGCAAGTCAATT 59.498 43.478 0.00 0.00 0.00 2.32
600 601 4.023193 CGTAGGAACAAGGCAAGTCAATTT 60.023 41.667 0.00 0.00 0.00 1.82
601 602 4.590850 AGGAACAAGGCAAGTCAATTTC 57.409 40.909 0.00 0.00 0.00 2.17
602 603 4.218312 AGGAACAAGGCAAGTCAATTTCT 58.782 39.130 0.00 0.00 0.00 2.52
603 604 4.651045 AGGAACAAGGCAAGTCAATTTCTT 59.349 37.500 0.00 0.00 0.00 2.52
604 605 5.833131 AGGAACAAGGCAAGTCAATTTCTTA 59.167 36.000 0.00 0.00 0.00 2.10
605 606 6.323739 AGGAACAAGGCAAGTCAATTTCTTAA 59.676 34.615 0.00 0.00 0.00 1.85
606 607 6.983890 GGAACAAGGCAAGTCAATTTCTTAAA 59.016 34.615 0.00 0.00 0.00 1.52
607 608 7.494298 GGAACAAGGCAAGTCAATTTCTTAAAA 59.506 33.333 0.00 0.00 0.00 1.52
608 609 8.962884 AACAAGGCAAGTCAATTTCTTAAAAT 57.037 26.923 0.00 0.00 36.64 1.82
609 610 8.369218 ACAAGGCAAGTCAATTTCTTAAAATG 57.631 30.769 0.00 0.00 35.27 2.32
610 611 7.442062 ACAAGGCAAGTCAATTTCTTAAAATGG 59.558 33.333 0.00 0.00 35.27 3.16
611 612 5.934043 AGGCAAGTCAATTTCTTAAAATGGC 59.066 36.000 0.00 0.00 35.27 4.40
612 613 5.700373 GGCAAGTCAATTTCTTAAAATGGCA 59.300 36.000 0.00 0.00 35.27 4.92
613 614 6.204495 GGCAAGTCAATTTCTTAAAATGGCAA 59.796 34.615 0.00 0.00 35.27 4.52
614 615 7.255070 GGCAAGTCAATTTCTTAAAATGGCAAA 60.255 33.333 0.00 0.00 35.27 3.68
615 616 8.291740 GCAAGTCAATTTCTTAAAATGGCAAAT 58.708 29.630 0.00 0.00 35.27 2.32
616 617 9.601971 CAAGTCAATTTCTTAAAATGGCAAATG 57.398 29.630 0.00 0.00 35.27 2.32
617 618 8.907222 AGTCAATTTCTTAAAATGGCAAATGT 57.093 26.923 0.00 0.00 35.27 2.71
618 619 8.992073 AGTCAATTTCTTAAAATGGCAAATGTC 58.008 29.630 0.00 0.00 35.27 3.06
619 620 8.992073 GTCAATTTCTTAAAATGGCAAATGTCT 58.008 29.630 0.00 0.00 35.27 3.41
623 624 9.822185 ATTTCTTAAAATGGCAAATGTCTATCC 57.178 29.630 0.00 0.00 33.78 2.59
624 625 8.593945 TTCTTAAAATGGCAAATGTCTATCCT 57.406 30.769 0.00 0.00 0.00 3.24
625 626 9.693739 TTCTTAAAATGGCAAATGTCTATCCTA 57.306 29.630 0.00 0.00 0.00 2.94
626 627 9.866655 TCTTAAAATGGCAAATGTCTATCCTAT 57.133 29.630 0.00 0.00 0.00 2.57
628 629 9.639563 TTAAAATGGCAAATGTCTATCCTATCA 57.360 29.630 0.00 0.00 0.00 2.15
629 630 8.537728 AAAATGGCAAATGTCTATCCTATCAA 57.462 30.769 0.00 0.00 0.00 2.57
630 631 8.537728 AAATGGCAAATGTCTATCCTATCAAA 57.462 30.769 0.00 0.00 0.00 2.69
631 632 8.716674 AATGGCAAATGTCTATCCTATCAAAT 57.283 30.769 0.00 0.00 0.00 2.32
632 633 8.716674 ATGGCAAATGTCTATCCTATCAAATT 57.283 30.769 0.00 0.00 0.00 1.82
633 634 8.169977 TGGCAAATGTCTATCCTATCAAATTC 57.830 34.615 0.00 0.00 0.00 2.17
634 635 7.231317 TGGCAAATGTCTATCCTATCAAATTCC 59.769 37.037 0.00 0.00 0.00 3.01
635 636 7.449704 GGCAAATGTCTATCCTATCAAATTCCT 59.550 37.037 0.00 0.00 0.00 3.36
636 637 9.507329 GCAAATGTCTATCCTATCAAATTCCTA 57.493 33.333 0.00 0.00 0.00 2.94
665 666 8.296211 ACTACTTCTAATTCCTACCTTGAGAC 57.704 38.462 0.00 0.00 0.00 3.36
666 667 6.547930 ACTTCTAATTCCTACCTTGAGACC 57.452 41.667 0.00 0.00 0.00 3.85
667 668 6.265304 ACTTCTAATTCCTACCTTGAGACCT 58.735 40.000 0.00 0.00 0.00 3.85
668 669 6.731448 ACTTCTAATTCCTACCTTGAGACCTT 59.269 38.462 0.00 0.00 0.00 3.50
669 670 7.899709 ACTTCTAATTCCTACCTTGAGACCTTA 59.100 37.037 0.00 0.00 0.00 2.69
670 671 7.899648 TCTAATTCCTACCTTGAGACCTTAG 57.100 40.000 0.00 0.00 0.00 2.18
671 672 5.360649 AATTCCTACCTTGAGACCTTAGC 57.639 43.478 0.00 0.00 0.00 3.09
672 673 3.468071 TCCTACCTTGAGACCTTAGCA 57.532 47.619 0.00 0.00 0.00 3.49
673 674 3.786553 TCCTACCTTGAGACCTTAGCAA 58.213 45.455 0.00 0.00 0.00 3.91
674 675 3.769844 TCCTACCTTGAGACCTTAGCAAG 59.230 47.826 0.00 0.00 38.90 4.01
687 688 5.452078 CCTTAGCAAGGTCAATGTTTTGA 57.548 39.130 6.74 0.00 43.95 2.69
711 712 4.341783 GCACTGCACTGCTCCCCT 62.342 66.667 10.68 0.00 34.06 4.79
712 713 2.959484 GCACTGCACTGCTCCCCTA 61.959 63.158 10.68 0.00 34.06 3.53
713 714 1.910722 CACTGCACTGCTCCCCTAT 59.089 57.895 1.98 0.00 0.00 2.57
714 715 0.254178 CACTGCACTGCTCCCCTATT 59.746 55.000 1.98 0.00 0.00 1.73
715 716 0.254178 ACTGCACTGCTCCCCTATTG 59.746 55.000 1.98 0.00 0.00 1.90
716 717 0.254178 CTGCACTGCTCCCCTATTGT 59.746 55.000 1.98 0.00 0.00 2.71
717 718 0.698238 TGCACTGCTCCCCTATTGTT 59.302 50.000 1.98 0.00 0.00 2.83
846 849 4.421554 TCCTCCCAGCCCTCCCTG 62.422 72.222 0.00 0.00 0.00 4.45
1926 1941 3.520402 CTCGAGGAGCTGGAGGTC 58.480 66.667 3.91 0.00 41.50 3.85
2103 2118 0.956410 CGGACCTCGACAGTCTCACT 60.956 60.000 9.95 0.00 42.43 3.41
2293 2380 5.012664 AGGTCTCTTTCCTTTTCCTCTTCTC 59.987 44.000 0.00 0.00 30.18 2.87
2601 3837 3.831333 TGATGTCTCTCACTTGCTTCTCT 59.169 43.478 0.00 0.00 0.00 3.10
2603 3839 5.478332 TGATGTCTCTCACTTGCTTCTCTTA 59.522 40.000 0.00 0.00 0.00 2.10
2604 3840 5.991933 TGTCTCTCACTTGCTTCTCTTAT 57.008 39.130 0.00 0.00 0.00 1.73
2605 3841 5.718146 TGTCTCTCACTTGCTTCTCTTATG 58.282 41.667 0.00 0.00 0.00 1.90
2606 3842 5.108517 GTCTCTCACTTGCTTCTCTTATGG 58.891 45.833 0.00 0.00 0.00 2.74
2856 4568 0.981277 TCCACCTTAGCTAGCCCACC 60.981 60.000 12.13 0.00 0.00 4.61
3019 4732 3.096092 TGTTAAAATCACAGGGGGCATC 58.904 45.455 0.00 0.00 0.00 3.91
3068 4783 6.438425 AGAAATTGGCCAGTGTATTGAGATTT 59.562 34.615 5.11 4.88 0.00 2.17
3070 4785 5.389859 TTGGCCAGTGTATTGAGATTTTG 57.610 39.130 5.11 0.00 0.00 2.44
3306 5040 3.010420 GTTCCAGGAATTCTGCAGGTAC 58.990 50.000 15.13 0.04 42.05 3.34
3307 5041 2.265367 TCCAGGAATTCTGCAGGTACA 58.735 47.619 15.13 0.00 42.05 2.90
3308 5042 2.846206 TCCAGGAATTCTGCAGGTACAT 59.154 45.455 15.13 0.00 42.05 2.29
3309 5043 3.118261 TCCAGGAATTCTGCAGGTACATC 60.118 47.826 15.13 5.69 42.05 3.06
3310 5044 3.118112 CCAGGAATTCTGCAGGTACATCT 60.118 47.826 15.13 2.36 42.05 2.90
3311 5045 4.125703 CAGGAATTCTGCAGGTACATCTC 58.874 47.826 15.13 1.47 36.60 2.75
3312 5046 3.776969 AGGAATTCTGCAGGTACATCTCA 59.223 43.478 15.13 0.00 0.00 3.27
3313 5047 3.873952 GGAATTCTGCAGGTACATCTCAC 59.126 47.826 15.13 0.00 0.00 3.51
3314 5048 4.507710 GAATTCTGCAGGTACATCTCACA 58.492 43.478 15.13 0.00 0.00 3.58
3315 5049 4.767578 ATTCTGCAGGTACATCTCACAT 57.232 40.909 15.13 0.00 0.00 3.21
3316 5050 3.808466 TCTGCAGGTACATCTCACATC 57.192 47.619 15.13 0.00 0.00 3.06
3317 5051 3.369175 TCTGCAGGTACATCTCACATCT 58.631 45.455 15.13 0.00 0.00 2.90
3318 5052 3.131755 TCTGCAGGTACATCTCACATCTG 59.868 47.826 15.13 0.00 0.00 2.90
3319 5053 2.208431 GCAGGTACATCTCACATCTGC 58.792 52.381 0.00 0.00 39.13 4.26
3320 5054 2.831333 CAGGTACATCTCACATCTGCC 58.169 52.381 0.00 0.00 0.00 4.85
3321 5055 1.410517 AGGTACATCTCACATCTGCCG 59.589 52.381 0.00 0.00 0.00 5.69
3322 5056 1.539065 GGTACATCTCACATCTGCCGG 60.539 57.143 0.00 0.00 0.00 6.13
3323 5057 1.409064 GTACATCTCACATCTGCCGGA 59.591 52.381 5.05 0.00 0.00 5.14
3324 5058 1.126488 ACATCTCACATCTGCCGGAT 58.874 50.000 5.05 0.00 34.51 4.18
3325 5059 1.487976 ACATCTCACATCTGCCGGATT 59.512 47.619 5.05 0.00 31.27 3.01
3326 5060 1.871676 CATCTCACATCTGCCGGATTG 59.128 52.381 5.05 0.00 31.27 2.67
3327 5061 0.462581 TCTCACATCTGCCGGATTGC 60.463 55.000 5.05 0.00 31.27 3.56
3328 5062 0.745486 CTCACATCTGCCGGATTGCA 60.745 55.000 5.05 0.00 39.37 4.08
3329 5063 1.026182 TCACATCTGCCGGATTGCAC 61.026 55.000 5.05 0.00 36.04 4.57
3330 5064 1.002257 ACATCTGCCGGATTGCACA 60.002 52.632 5.05 0.00 36.04 4.57
3331 5065 1.028330 ACATCTGCCGGATTGCACAG 61.028 55.000 5.05 0.96 36.04 3.66
3332 5066 1.452651 ATCTGCCGGATTGCACAGG 60.453 57.895 5.05 0.00 36.04 4.00
3333 5067 1.913951 ATCTGCCGGATTGCACAGGA 61.914 55.000 5.05 0.00 36.04 3.86
3334 5068 1.452651 CTGCCGGATTGCACAGGAT 60.453 57.895 5.05 0.00 36.04 3.24
3335 5069 1.001020 TGCCGGATTGCACAGGATT 60.001 52.632 5.05 0.00 36.04 3.01
3336 5070 1.031571 TGCCGGATTGCACAGGATTC 61.032 55.000 5.05 0.00 36.04 2.52
3337 5071 0.749454 GCCGGATTGCACAGGATTCT 60.749 55.000 5.05 0.00 0.00 2.40
3338 5072 1.019673 CCGGATTGCACAGGATTCTG 58.980 55.000 0.00 0.00 46.10 3.02
3352 5086 6.830873 CAGGATTCTGTTTCCTCTCATTTT 57.169 37.500 0.00 0.00 41.78 1.82
3353 5087 6.618811 CAGGATTCTGTTTCCTCTCATTTTG 58.381 40.000 0.00 0.00 41.78 2.44
3354 5088 6.208204 CAGGATTCTGTTTCCTCTCATTTTGT 59.792 38.462 0.00 0.00 41.78 2.83
3355 5089 6.779539 AGGATTCTGTTTCCTCTCATTTTGTT 59.220 34.615 0.00 0.00 39.46 2.83
3356 5090 7.944554 AGGATTCTGTTTCCTCTCATTTTGTTA 59.055 33.333 0.00 0.00 39.46 2.41
3357 5091 8.023706 GGATTCTGTTTCCTCTCATTTTGTTAC 58.976 37.037 0.00 0.00 0.00 2.50
3358 5092 8.697507 ATTCTGTTTCCTCTCATTTTGTTACT 57.302 30.769 0.00 0.00 0.00 2.24
3359 5093 8.519799 TTCTGTTTCCTCTCATTTTGTTACTT 57.480 30.769 0.00 0.00 0.00 2.24
3360 5094 9.621629 TTCTGTTTCCTCTCATTTTGTTACTTA 57.378 29.630 0.00 0.00 0.00 2.24
3361 5095 9.052759 TCTGTTTCCTCTCATTTTGTTACTTAC 57.947 33.333 0.00 0.00 0.00 2.34
3362 5096 8.740123 TGTTTCCTCTCATTTTGTTACTTACA 57.260 30.769 0.00 0.00 34.12 2.41
3363 5097 9.349713 TGTTTCCTCTCATTTTGTTACTTACAT 57.650 29.630 0.00 0.00 36.44 2.29
3364 5098 9.612620 GTTTCCTCTCATTTTGTTACTTACATG 57.387 33.333 0.00 0.00 36.44 3.21
3365 5099 8.918202 TTCCTCTCATTTTGTTACTTACATGT 57.082 30.769 2.69 2.69 36.44 3.21
3366 5100 8.322906 TCCTCTCATTTTGTTACTTACATGTG 57.677 34.615 9.11 0.00 36.44 3.21
3816 5617 3.185246 GCTTAGGCTGCTCACTTCATA 57.815 47.619 0.00 0.00 35.22 2.15
3830 5631 4.040339 TCACTTCATACCAGCAACTTCTGA 59.960 41.667 0.00 0.00 36.19 3.27
3859 5662 7.756272 TGCATTCATCTTGATATTGACAAACAC 59.244 33.333 0.00 0.00 0.00 3.32
3860 5663 7.972277 GCATTCATCTTGATATTGACAAACACT 59.028 33.333 0.00 0.00 0.00 3.55
3867 5670 4.929211 TGATATTGACAAACACTGACCTCG 59.071 41.667 0.00 0.00 0.00 4.63
4030 5833 3.638627 TCATCGACATCCTGCAAGACTAT 59.361 43.478 0.00 0.00 34.07 2.12
4253 6056 1.358787 TCTTCTTTGCCCACCATCCAT 59.641 47.619 0.00 0.00 0.00 3.41
4289 6092 5.585047 AGGTAACATAATCTGTTCTTTCGGC 59.415 40.000 0.00 0.00 44.99 5.54
4478 6281 6.607019 TGTAACCATTCCCTACTTGTTTTCT 58.393 36.000 0.00 0.00 0.00 2.52
4732 6536 7.704047 GCAATGAAGATTGGGATTTAGAGTTTC 59.296 37.037 0.00 0.00 39.62 2.78
4789 6594 1.997874 GATCACTGCCCCCTCCTGT 60.998 63.158 0.00 0.00 0.00 4.00
4808 6613 3.164268 TGTTTGCTAATGATGTTGGCCT 58.836 40.909 3.32 0.00 0.00 5.19
4829 6634 5.755849 CCTAAAGAAGCCTAAATCCTTCCA 58.244 41.667 0.00 0.00 38.53 3.53
4844 6649 7.423844 AATCCTTCCAGTTTGAAAACTTCTT 57.576 32.000 5.70 0.00 46.52 2.52
4847 6652 6.095440 TCCTTCCAGTTTGAAAACTTCTTGAG 59.905 38.462 5.70 1.59 46.52 3.02
4849 6654 6.683974 TCCAGTTTGAAAACTTCTTGAGAG 57.316 37.500 5.70 0.00 46.52 3.20
4856 6661 5.862845 TGAAAACTTCTTGAGAGAGATGCT 58.137 37.500 0.00 0.00 32.44 3.79
4872 6679 2.307496 TGCTGGGATTCCAACATGTT 57.693 45.000 4.92 4.92 43.51 2.71
4877 6684 3.570540 TGGGATTCCAACATGTTGTCAA 58.429 40.909 31.20 24.12 40.73 3.18
5091 6898 3.328050 AGGAAAGGGATCTTCGAACAAGT 59.672 43.478 0.00 0.00 31.82 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.349357 GGAAGAACAGCCTCCTGAGTT 59.651 52.381 0.00 0.00 41.77 3.01
1 2 0.980423 GGAAGAACAGCCTCCTGAGT 59.020 55.000 0.00 0.00 41.77 3.41
2 3 0.251634 GGGAAGAACAGCCTCCTGAG 59.748 60.000 0.00 0.00 41.77 3.35
3 4 0.178891 AGGGAAGAACAGCCTCCTGA 60.179 55.000 0.00 0.00 41.77 3.86
4 5 0.695347 AAGGGAAGAACAGCCTCCTG 59.305 55.000 0.00 0.00 44.80 3.86
5 6 0.695347 CAAGGGAAGAACAGCCTCCT 59.305 55.000 0.00 0.00 0.00 3.69
6 7 0.402121 ACAAGGGAAGAACAGCCTCC 59.598 55.000 0.00 0.00 0.00 4.30
7 8 2.303311 AGTACAAGGGAAGAACAGCCTC 59.697 50.000 0.00 0.00 0.00 4.70
8 9 2.039084 CAGTACAAGGGAAGAACAGCCT 59.961 50.000 0.00 0.00 0.00 4.58
9 10 2.224548 ACAGTACAAGGGAAGAACAGCC 60.225 50.000 0.00 0.00 0.00 4.85
10 11 3.127425 ACAGTACAAGGGAAGAACAGC 57.873 47.619 0.00 0.00 0.00 4.40
11 12 4.703897 TGAACAGTACAAGGGAAGAACAG 58.296 43.478 0.00 0.00 0.00 3.16
12 13 4.764050 TGAACAGTACAAGGGAAGAACA 57.236 40.909 0.00 0.00 0.00 3.18
13 14 5.305585 TGATGAACAGTACAAGGGAAGAAC 58.694 41.667 0.00 0.00 0.00 3.01
14 15 5.560722 TGATGAACAGTACAAGGGAAGAA 57.439 39.130 0.00 0.00 0.00 2.52
15 16 5.248248 TGATGATGAACAGTACAAGGGAAGA 59.752 40.000 0.00 0.00 0.00 2.87
16 17 5.491070 TGATGATGAACAGTACAAGGGAAG 58.509 41.667 0.00 0.00 0.00 3.46
17 18 5.491070 CTGATGATGAACAGTACAAGGGAA 58.509 41.667 0.00 0.00 0.00 3.97
18 19 4.623886 GCTGATGATGAACAGTACAAGGGA 60.624 45.833 0.00 0.00 36.62 4.20
19 20 3.624861 GCTGATGATGAACAGTACAAGGG 59.375 47.826 0.00 0.00 36.62 3.95
20 21 3.624861 GGCTGATGATGAACAGTACAAGG 59.375 47.826 0.00 0.00 36.62 3.61
21 22 3.624861 GGGCTGATGATGAACAGTACAAG 59.375 47.826 0.00 0.00 36.62 3.16
22 23 3.264193 AGGGCTGATGATGAACAGTACAA 59.736 43.478 0.00 0.00 36.62 2.41
23 24 2.840038 AGGGCTGATGATGAACAGTACA 59.160 45.455 0.00 0.00 36.62 2.90
24 25 3.550437 AGGGCTGATGATGAACAGTAC 57.450 47.619 0.00 0.00 36.62 2.73
25 26 4.546674 TCTAGGGCTGATGATGAACAGTA 58.453 43.478 0.00 0.00 36.62 2.74
26 27 3.378512 TCTAGGGCTGATGATGAACAGT 58.621 45.455 0.00 0.00 36.62 3.55
27 28 3.244146 CCTCTAGGGCTGATGATGAACAG 60.244 52.174 0.00 0.00 37.22 3.16
28 29 2.702478 CCTCTAGGGCTGATGATGAACA 59.298 50.000 0.00 0.00 0.00 3.18
29 30 3.399440 CCTCTAGGGCTGATGATGAAC 57.601 52.381 0.00 0.00 0.00 3.18
41 42 0.181350 GTGGTGGATTGCCTCTAGGG 59.819 60.000 0.00 0.00 35.18 3.53
42 43 0.181350 GGTGGTGGATTGCCTCTAGG 59.819 60.000 0.00 0.00 38.53 3.02
43 44 0.911769 TGGTGGTGGATTGCCTCTAG 59.088 55.000 0.00 0.00 34.31 2.43
44 45 0.618458 GTGGTGGTGGATTGCCTCTA 59.382 55.000 0.00 0.00 34.31 2.43
45 46 1.380302 GTGGTGGTGGATTGCCTCT 59.620 57.895 0.00 0.00 34.31 3.69
46 47 1.678970 GGTGGTGGTGGATTGCCTC 60.679 63.158 0.00 0.00 34.31 4.70
47 48 2.440599 GGTGGTGGTGGATTGCCT 59.559 61.111 0.00 0.00 34.31 4.75
48 49 2.117206 TGGTGGTGGTGGATTGCC 59.883 61.111 0.00 0.00 0.00 4.52
49 50 1.530419 TGTGGTGGTGGTGGATTGC 60.530 57.895 0.00 0.00 0.00 3.56
50 51 0.178992 AGTGTGGTGGTGGTGGATTG 60.179 55.000 0.00 0.00 0.00 2.67
51 52 0.178992 CAGTGTGGTGGTGGTGGATT 60.179 55.000 0.00 0.00 0.00 3.01
52 53 1.455849 CAGTGTGGTGGTGGTGGAT 59.544 57.895 0.00 0.00 0.00 3.41
53 54 2.751731 CCAGTGTGGTGGTGGTGGA 61.752 63.158 0.00 0.00 31.35 4.02
54 55 2.203337 CCAGTGTGGTGGTGGTGG 60.203 66.667 0.00 0.00 31.35 4.61
55 56 1.227943 CTCCAGTGTGGTGGTGGTG 60.228 63.158 0.00 0.00 39.03 4.17
56 57 0.399376 TACTCCAGTGTGGTGGTGGT 60.399 55.000 0.47 0.00 39.03 4.16
57 58 0.321671 CTACTCCAGTGTGGTGGTGG 59.678 60.000 0.47 0.00 39.03 4.61
58 59 0.321671 CCTACTCCAGTGTGGTGGTG 59.678 60.000 0.47 0.00 39.03 4.17
59 60 0.836400 CCCTACTCCAGTGTGGTGGT 60.836 60.000 0.47 1.04 39.03 4.16
60 61 0.836400 ACCCTACTCCAGTGTGGTGG 60.836 60.000 2.18 0.00 39.03 4.61
61 62 1.933021 TACCCTACTCCAGTGTGGTG 58.067 55.000 10.66 0.00 39.03 4.17
62 63 2.942604 ATACCCTACTCCAGTGTGGT 57.057 50.000 7.06 7.06 39.03 4.16
63 64 4.028131 TGTAATACCCTACTCCAGTGTGG 58.972 47.826 0.00 0.00 39.43 4.17
64 65 4.142004 GGTGTAATACCCTACTCCAGTGTG 60.142 50.000 0.00 0.00 44.15 3.82
65 66 4.028825 GGTGTAATACCCTACTCCAGTGT 58.971 47.826 0.00 0.00 44.15 3.55
66 67 4.667519 GGTGTAATACCCTACTCCAGTG 57.332 50.000 0.00 0.00 44.15 3.66
87 88 2.415426 GTTTGGGCCACCGTTGTG 59.585 61.111 5.23 0.00 42.39 3.33
88 89 2.835895 GGTTTGGGCCACCGTTGT 60.836 61.111 5.23 0.00 40.75 3.32
89 90 2.835431 TGGTTTGGGCCACCGTTG 60.835 61.111 5.23 0.00 40.75 4.10
90 91 1.997256 TACTGGTTTGGGCCACCGTT 61.997 55.000 5.23 0.00 40.75 4.44
91 92 1.785353 ATACTGGTTTGGGCCACCGT 61.785 55.000 5.23 10.46 40.75 4.83
92 93 0.253610 TATACTGGTTTGGGCCACCG 59.746 55.000 5.23 4.62 40.75 4.94
93 94 2.517998 TTATACTGGTTTGGGCCACC 57.482 50.000 5.23 5.84 34.36 4.61
94 95 4.278310 AGATTTATACTGGTTTGGGCCAC 58.722 43.478 5.23 0.00 34.36 5.01
95 96 4.532834 GAGATTTATACTGGTTTGGGCCA 58.467 43.478 0.00 0.00 36.97 5.36
96 97 3.564225 CGAGATTTATACTGGTTTGGGCC 59.436 47.826 0.00 0.00 0.00 5.80
97 98 4.035208 CACGAGATTTATACTGGTTTGGGC 59.965 45.833 0.00 0.00 0.00 5.36
98 99 5.183228 ACACGAGATTTATACTGGTTTGGG 58.817 41.667 0.00 0.00 0.00 4.12
99 100 6.106673 AGACACGAGATTTATACTGGTTTGG 58.893 40.000 0.00 0.00 0.00 3.28
100 101 7.036220 AGAGACACGAGATTTATACTGGTTTG 58.964 38.462 0.00 0.00 0.00 2.93
101 102 7.171630 AGAGACACGAGATTTATACTGGTTT 57.828 36.000 0.00 0.00 0.00 3.27
102 103 6.777213 AGAGACACGAGATTTATACTGGTT 57.223 37.500 0.00 0.00 0.00 3.67
103 104 6.777213 AAGAGACACGAGATTTATACTGGT 57.223 37.500 0.00 0.00 0.00 4.00
104 105 7.009631 CACAAAGAGACACGAGATTTATACTGG 59.990 40.741 0.00 0.00 0.00 4.00
105 106 7.542477 ACACAAAGAGACACGAGATTTATACTG 59.458 37.037 0.00 0.00 0.00 2.74
106 107 7.603651 ACACAAAGAGACACGAGATTTATACT 58.396 34.615 0.00 0.00 0.00 2.12
107 108 7.009357 GGACACAAAGAGACACGAGATTTATAC 59.991 40.741 0.00 0.00 0.00 1.47
108 109 7.033791 GGACACAAAGAGACACGAGATTTATA 58.966 38.462 0.00 0.00 0.00 0.98
109 110 5.869888 GGACACAAAGAGACACGAGATTTAT 59.130 40.000 0.00 0.00 0.00 1.40
110 111 5.227908 GGACACAAAGAGACACGAGATTTA 58.772 41.667 0.00 0.00 0.00 1.40
111 112 4.058817 GGACACAAAGAGACACGAGATTT 58.941 43.478 0.00 0.00 0.00 2.17
112 113 3.555168 GGGACACAAAGAGACACGAGATT 60.555 47.826 0.00 0.00 0.00 2.40
113 114 2.028930 GGGACACAAAGAGACACGAGAT 60.029 50.000 0.00 0.00 0.00 2.75
114 115 1.340248 GGGACACAAAGAGACACGAGA 59.660 52.381 0.00 0.00 0.00 4.04
115 116 1.784525 GGGACACAAAGAGACACGAG 58.215 55.000 0.00 0.00 0.00 4.18
116 117 0.031585 CGGGACACAAAGAGACACGA 59.968 55.000 0.00 0.00 0.00 4.35
117 118 0.031585 TCGGGACACAAAGAGACACG 59.968 55.000 0.00 0.00 0.00 4.49
118 119 1.068741 ACTCGGGACACAAAGAGACAC 59.931 52.381 0.00 0.00 34.98 3.67
119 120 1.410004 ACTCGGGACACAAAGAGACA 58.590 50.000 0.00 0.00 34.98 3.41
120 121 2.405172 GAACTCGGGACACAAAGAGAC 58.595 52.381 0.00 0.00 34.98 3.36
121 122 1.000607 CGAACTCGGGACACAAAGAGA 60.001 52.381 0.00 0.00 34.98 3.10
122 123 1.269621 ACGAACTCGGGACACAAAGAG 60.270 52.381 3.88 0.00 44.95 2.85
123 124 0.748450 ACGAACTCGGGACACAAAGA 59.252 50.000 3.88 0.00 44.95 2.52
124 125 1.137513 GACGAACTCGGGACACAAAG 58.862 55.000 3.88 0.00 44.95 2.77
125 126 0.595567 CGACGAACTCGGGACACAAA 60.596 55.000 3.88 0.00 44.95 2.83
126 127 1.008194 CGACGAACTCGGGACACAA 60.008 57.895 3.88 0.00 44.95 3.33
127 128 1.848932 CTCGACGAACTCGGGACACA 61.849 60.000 0.00 0.00 46.98 3.72
128 129 1.154263 CTCGACGAACTCGGGACAC 60.154 63.158 0.00 0.00 46.98 3.67
129 130 1.168407 AACTCGACGAACTCGGGACA 61.168 55.000 0.29 0.00 46.98 4.02
130 131 0.454117 GAACTCGACGAACTCGGGAC 60.454 60.000 0.29 0.00 46.98 4.46
131 132 1.871772 GAACTCGACGAACTCGGGA 59.128 57.895 0.29 0.01 46.98 5.14
133 134 0.788645 GACGAACTCGACGAACTCGG 60.789 60.000 23.94 6.39 43.16 4.63
134 135 0.788645 GGACGAACTCGACGAACTCG 60.789 60.000 20.57 20.57 44.44 4.18
135 136 0.788645 CGGACGAACTCGACGAACTC 60.789 60.000 6.05 0.00 42.23 3.01
136 137 1.206072 CGGACGAACTCGACGAACT 59.794 57.895 6.05 0.00 42.23 3.01
137 138 2.423818 GCGGACGAACTCGACGAAC 61.424 63.158 19.23 0.00 42.23 3.95
138 139 2.127118 GCGGACGAACTCGACGAA 60.127 61.111 19.23 0.00 42.23 3.85
139 140 4.434938 CGCGGACGAACTCGACGA 62.435 66.667 19.23 0.00 43.93 4.20
149 150 1.722852 CGCTAAGATCTCGCGGACG 60.723 63.158 23.90 8.29 42.88 4.79
150 151 0.384974 CTCGCTAAGATCTCGCGGAC 60.385 60.000 28.12 4.40 46.23 4.79
151 152 0.814410 ACTCGCTAAGATCTCGCGGA 60.814 55.000 28.12 18.27 46.23 5.54
152 153 0.029567 AACTCGCTAAGATCTCGCGG 59.970 55.000 28.12 22.54 46.23 6.46
154 155 2.350964 CCCTAACTCGCTAAGATCTCGC 60.351 54.545 0.00 0.87 0.00 5.03
155 156 2.350964 GCCCTAACTCGCTAAGATCTCG 60.351 54.545 0.00 0.00 0.00 4.04
156 157 2.350964 CGCCCTAACTCGCTAAGATCTC 60.351 54.545 0.00 0.00 0.00 2.75
157 158 1.609555 CGCCCTAACTCGCTAAGATCT 59.390 52.381 0.00 0.00 0.00 2.75
158 159 1.337387 ACGCCCTAACTCGCTAAGATC 59.663 52.381 0.00 0.00 0.00 2.75
159 160 1.400737 ACGCCCTAACTCGCTAAGAT 58.599 50.000 0.00 0.00 0.00 2.40
160 161 1.945394 CTACGCCCTAACTCGCTAAGA 59.055 52.381 0.00 0.00 0.00 2.10
161 162 1.945394 TCTACGCCCTAACTCGCTAAG 59.055 52.381 0.00 0.00 0.00 2.18
162 163 2.042686 TCTACGCCCTAACTCGCTAA 57.957 50.000 0.00 0.00 0.00 3.09
163 164 2.149578 GATCTACGCCCTAACTCGCTA 58.850 52.381 0.00 0.00 0.00 4.26
164 165 0.953003 GATCTACGCCCTAACTCGCT 59.047 55.000 0.00 0.00 0.00 4.93
165 166 0.385723 CGATCTACGCCCTAACTCGC 60.386 60.000 0.00 0.00 34.51 5.03
166 167 0.237761 CCGATCTACGCCCTAACTCG 59.762 60.000 0.00 0.00 41.07 4.18
167 168 1.316651 ACCGATCTACGCCCTAACTC 58.683 55.000 0.00 0.00 41.07 3.01
168 169 2.502295 CTACCGATCTACGCCCTAACT 58.498 52.381 0.00 0.00 41.07 2.24
169 170 1.538950 CCTACCGATCTACGCCCTAAC 59.461 57.143 0.00 0.00 41.07 2.34
170 171 1.421268 TCCTACCGATCTACGCCCTAA 59.579 52.381 0.00 0.00 41.07 2.69
171 172 1.002888 CTCCTACCGATCTACGCCCTA 59.997 57.143 0.00 0.00 41.07 3.53
172 173 0.250814 CTCCTACCGATCTACGCCCT 60.251 60.000 0.00 0.00 41.07 5.19
173 174 1.242665 CCTCCTACCGATCTACGCCC 61.243 65.000 0.00 0.00 41.07 6.13
174 175 1.242665 CCCTCCTACCGATCTACGCC 61.243 65.000 0.00 0.00 41.07 5.68
175 176 0.250640 TCCCTCCTACCGATCTACGC 60.251 60.000 0.00 0.00 41.07 4.42
176 177 2.267174 TTCCCTCCTACCGATCTACG 57.733 55.000 0.00 0.00 42.18 3.51
177 178 3.569277 GTCTTTCCCTCCTACCGATCTAC 59.431 52.174 0.00 0.00 0.00 2.59
178 179 3.462579 AGTCTTTCCCTCCTACCGATCTA 59.537 47.826 0.00 0.00 0.00 1.98
179 180 2.245287 AGTCTTTCCCTCCTACCGATCT 59.755 50.000 0.00 0.00 0.00 2.75
180 181 2.668625 AGTCTTTCCCTCCTACCGATC 58.331 52.381 0.00 0.00 0.00 3.69
181 182 2.850695 AGTCTTTCCCTCCTACCGAT 57.149 50.000 0.00 0.00 0.00 4.18
182 183 2.454538 GAAGTCTTTCCCTCCTACCGA 58.545 52.381 0.00 0.00 0.00 4.69
183 184 1.134560 CGAAGTCTTTCCCTCCTACCG 59.865 57.143 0.00 0.00 0.00 4.02
184 185 1.134759 GCGAAGTCTTTCCCTCCTACC 60.135 57.143 0.00 0.00 0.00 3.18
185 186 1.469423 CGCGAAGTCTTTCCCTCCTAC 60.469 57.143 0.00 0.00 0.00 3.18
186 187 0.815734 CGCGAAGTCTTTCCCTCCTA 59.184 55.000 0.00 0.00 0.00 2.94
187 188 1.186267 ACGCGAAGTCTTTCCCTCCT 61.186 55.000 15.93 0.00 0.00 3.69
188 189 1.014564 CACGCGAAGTCTTTCCCTCC 61.015 60.000 15.93 0.00 0.00 4.30
189 190 1.627550 GCACGCGAAGTCTTTCCCTC 61.628 60.000 15.93 0.00 0.00 4.30
190 191 1.668151 GCACGCGAAGTCTTTCCCT 60.668 57.895 15.93 0.00 0.00 4.20
191 192 1.959226 TGCACGCGAAGTCTTTCCC 60.959 57.895 15.93 0.00 0.00 3.97
192 193 1.204312 GTGCACGCGAAGTCTTTCC 59.796 57.895 15.93 0.00 0.00 3.13
193 194 1.204312 GGTGCACGCGAAGTCTTTC 59.796 57.895 15.93 0.00 0.00 2.62
194 195 2.251642 GGGTGCACGCGAAGTCTTT 61.252 57.895 18.81 0.00 0.00 2.52
195 196 2.665185 GGGTGCACGCGAAGTCTT 60.665 61.111 18.81 0.00 0.00 3.01
196 197 4.681978 GGGGTGCACGCGAAGTCT 62.682 66.667 25.43 0.00 0.00 3.24
197 198 4.980805 TGGGGTGCACGCGAAGTC 62.981 66.667 25.43 13.06 34.15 3.01
198 199 4.988598 CTGGGGTGCACGCGAAGT 62.989 66.667 25.43 0.00 34.15 3.01
199 200 4.988598 ACTGGGGTGCACGCGAAG 62.989 66.667 25.43 24.95 34.15 3.79
203 204 3.660111 GAACACTGGGGTGCACGC 61.660 66.667 24.66 24.66 46.57 5.34
204 205 3.345808 CGAACACTGGGGTGCACG 61.346 66.667 11.45 0.00 46.57 5.34
205 206 1.525077 TTCGAACACTGGGGTGCAC 60.525 57.895 8.80 8.80 46.57 4.57
206 207 1.525077 GTTCGAACACTGGGGTGCA 60.525 57.895 23.12 0.00 46.57 4.57
207 208 2.258726 GGTTCGAACACTGGGGTGC 61.259 63.158 28.24 5.21 46.57 5.01
209 210 1.426751 TAAGGTTCGAACACTGGGGT 58.573 50.000 28.24 11.07 0.00 4.95
210 211 2.423577 CTTAAGGTTCGAACACTGGGG 58.576 52.381 28.24 10.57 0.00 4.96
211 212 2.423577 CCTTAAGGTTCGAACACTGGG 58.576 52.381 28.24 18.20 0.00 4.45
212 213 2.423577 CCCTTAAGGTTCGAACACTGG 58.576 52.381 28.24 20.01 0.00 4.00
224 225 0.885879 GTTCCGGCAAACCCTTAAGG 59.114 55.000 15.14 15.14 43.78 2.69
225 226 0.885879 GGTTCCGGCAAACCCTTAAG 59.114 55.000 13.01 0.00 42.46 1.85
226 227 3.039452 GGTTCCGGCAAACCCTTAA 57.961 52.632 13.01 0.00 42.46 1.85
227 228 4.826248 GGTTCCGGCAAACCCTTA 57.174 55.556 13.01 0.00 42.46 2.69
231 232 3.299977 GTGGGGTTCCGGCAAACC 61.300 66.667 15.21 15.21 46.66 3.27
232 233 1.873270 GATGTGGGGTTCCGGCAAAC 61.873 60.000 0.00 0.00 35.24 2.93
233 234 1.605165 GATGTGGGGTTCCGGCAAA 60.605 57.895 0.00 0.00 35.24 3.68
234 235 2.034999 GATGTGGGGTTCCGGCAA 59.965 61.111 0.00 0.00 35.24 4.52
235 236 4.041762 GGATGTGGGGTTCCGGCA 62.042 66.667 0.00 0.00 35.24 5.69
239 240 1.376812 GTGTCGGATGTGGGGTTCC 60.377 63.158 0.00 0.00 0.00 3.62
240 241 1.376812 GGTGTCGGATGTGGGGTTC 60.377 63.158 0.00 0.00 0.00 3.62
241 242 2.754375 GGTGTCGGATGTGGGGTT 59.246 61.111 0.00 0.00 0.00 4.11
242 243 3.702048 CGGTGTCGGATGTGGGGT 61.702 66.667 0.00 0.00 0.00 4.95
255 256 1.066908 ACATTTTTGCTGACACCGGTG 59.933 47.619 32.83 32.83 0.00 4.94
256 257 1.066908 CACATTTTTGCTGACACCGGT 59.933 47.619 0.00 0.00 0.00 5.28
257 258 1.769733 CACATTTTTGCTGACACCGG 58.230 50.000 0.00 0.00 0.00 5.28
258 259 1.130955 GCACATTTTTGCTGACACCG 58.869 50.000 0.00 0.00 39.59 4.94
259 260 1.130955 CGCACATTTTTGCTGACACC 58.869 50.000 0.00 0.00 40.62 4.16
260 261 0.503961 GCGCACATTTTTGCTGACAC 59.496 50.000 0.30 0.00 40.62 3.67
261 262 0.597118 GGCGCACATTTTTGCTGACA 60.597 50.000 10.83 0.00 40.62 3.58
262 263 1.608093 CGGCGCACATTTTTGCTGAC 61.608 55.000 10.83 0.00 40.62 3.51
263 264 1.371512 CGGCGCACATTTTTGCTGA 60.372 52.632 10.83 0.00 40.62 4.26
264 265 2.374226 CCGGCGCACATTTTTGCTG 61.374 57.895 10.83 0.00 40.62 4.41
265 266 2.049248 CCGGCGCACATTTTTGCT 60.049 55.556 10.83 0.00 40.62 3.91
266 267 2.355718 ACCGGCGCACATTTTTGC 60.356 55.556 10.83 0.00 39.28 3.68
267 268 2.080062 CGACCGGCGCACATTTTTG 61.080 57.895 10.83 0.00 0.00 2.44
268 269 2.254051 CGACCGGCGCACATTTTT 59.746 55.556 10.83 0.00 0.00 1.94
278 279 2.746277 AAGGATGTTGCGACCGGC 60.746 61.111 0.00 0.00 43.96 6.13
279 280 1.361668 CTCAAGGATGTTGCGACCGG 61.362 60.000 0.00 0.00 0.00 5.28
280 281 1.361668 CCTCAAGGATGTTGCGACCG 61.362 60.000 0.45 0.00 37.39 4.79
281 282 1.648467 GCCTCAAGGATGTTGCGACC 61.648 60.000 0.45 0.00 37.39 4.79
282 283 1.796796 GCCTCAAGGATGTTGCGAC 59.203 57.895 0.00 0.00 37.39 5.19
283 284 1.741401 CGCCTCAAGGATGTTGCGA 60.741 57.895 0.00 0.00 44.45 5.10
284 285 2.034879 ACGCCTCAAGGATGTTGCG 61.035 57.895 0.00 0.00 45.88 4.85
285 286 1.503542 CACGCCTCAAGGATGTTGC 59.496 57.895 0.00 0.00 37.39 4.17
286 287 0.957395 AGCACGCCTCAAGGATGTTG 60.957 55.000 0.00 0.00 37.39 3.33
287 288 0.674895 GAGCACGCCTCAAGGATGTT 60.675 55.000 0.00 0.00 40.45 2.71
288 289 1.078848 GAGCACGCCTCAAGGATGT 60.079 57.895 0.00 0.00 40.45 3.06
289 290 2.169789 CGAGCACGCCTCAAGGATG 61.170 63.158 0.00 0.00 40.78 3.51
290 291 2.185350 CGAGCACGCCTCAAGGAT 59.815 61.111 0.00 0.00 40.78 3.24
291 292 4.069232 CCGAGCACGCCTCAAGGA 62.069 66.667 0.00 0.00 40.78 3.36
309 310 3.884581 TACGACGAGCACCACACGC 62.885 63.158 0.00 0.00 35.59 5.34
310 311 1.796355 CTACGACGAGCACCACACG 60.796 63.158 0.00 0.00 38.43 4.49
311 312 2.087009 GCTACGACGAGCACCACAC 61.087 63.158 0.00 0.00 42.36 3.82
312 313 2.196382 GAGCTACGACGAGCACCACA 62.196 60.000 17.47 0.00 45.43 4.17
313 314 1.514443 GAGCTACGACGAGCACCAC 60.514 63.158 17.47 6.24 45.43 4.16
314 315 2.875485 GAGCTACGACGAGCACCA 59.125 61.111 17.47 0.00 45.43 4.17
315 316 2.102553 GGAGCTACGACGAGCACC 59.897 66.667 17.47 16.49 45.43 5.01
316 317 1.935327 AAGGGAGCTACGACGAGCAC 61.935 60.000 17.47 12.61 45.43 4.40
317 318 1.248785 AAAGGGAGCTACGACGAGCA 61.249 55.000 17.47 0.00 45.43 4.26
318 319 0.802607 CAAAGGGAGCTACGACGAGC 60.803 60.000 0.00 6.52 43.19 5.03
319 320 0.526662 ACAAAGGGAGCTACGACGAG 59.473 55.000 0.00 0.00 0.00 4.18
320 321 0.524862 GACAAAGGGAGCTACGACGA 59.475 55.000 0.00 0.00 0.00 4.20
321 322 0.797249 CGACAAAGGGAGCTACGACG 60.797 60.000 0.00 0.00 0.00 5.12
322 323 1.077089 GCGACAAAGGGAGCTACGAC 61.077 60.000 0.00 0.00 0.00 4.34
323 324 1.214589 GCGACAAAGGGAGCTACGA 59.785 57.895 0.00 0.00 0.00 3.43
324 325 1.810030 GGCGACAAAGGGAGCTACG 60.810 63.158 0.00 0.00 0.00 3.51
325 326 0.460459 GAGGCGACAAAGGGAGCTAC 60.460 60.000 0.00 0.00 0.00 3.58
326 327 0.614979 AGAGGCGACAAAGGGAGCTA 60.615 55.000 0.00 0.00 0.00 3.32
327 328 1.484444 AAGAGGCGACAAAGGGAGCT 61.484 55.000 0.00 0.00 0.00 4.09
328 329 1.003233 AAGAGGCGACAAAGGGAGC 60.003 57.895 0.00 0.00 0.00 4.70
329 330 1.301677 GCAAGAGGCGACAAAGGGAG 61.302 60.000 0.00 0.00 0.00 4.30
330 331 1.302511 GCAAGAGGCGACAAAGGGA 60.303 57.895 0.00 0.00 0.00 4.20
331 332 3.267974 GCAAGAGGCGACAAAGGG 58.732 61.111 0.00 0.00 0.00 3.95
340 341 3.730761 CGGTGTGCTGCAAGAGGC 61.731 66.667 2.77 0.00 45.13 4.70
341 342 2.281070 ACGGTGTGCTGCAAGAGG 60.281 61.111 2.77 0.00 34.07 3.69
342 343 2.941333 CACGGTGTGCTGCAAGAG 59.059 61.111 2.77 0.00 34.07 2.85
351 352 0.888736 TTTGATCTGGGCACGGTGTG 60.889 55.000 10.24 0.00 36.51 3.82
352 353 0.038166 ATTTGATCTGGGCACGGTGT 59.962 50.000 10.24 0.00 0.00 4.16
353 354 0.734889 GATTTGATCTGGGCACGGTG 59.265 55.000 3.15 3.15 0.00 4.94
354 355 0.327924 TGATTTGATCTGGGCACGGT 59.672 50.000 0.00 0.00 0.00 4.83
355 356 1.683943 ATGATTTGATCTGGGCACGG 58.316 50.000 0.00 0.00 0.00 4.94
356 357 3.732212 TCTATGATTTGATCTGGGCACG 58.268 45.455 0.00 0.00 0.00 5.34
357 358 6.939163 AGTATTCTATGATTTGATCTGGGCAC 59.061 38.462 0.00 0.00 0.00 5.01
358 359 7.083062 AGTATTCTATGATTTGATCTGGGCA 57.917 36.000 0.00 0.00 0.00 5.36
359 360 7.164122 TGAGTATTCTATGATTTGATCTGGGC 58.836 38.462 0.00 0.00 0.00 5.36
360 361 7.823310 CCTGAGTATTCTATGATTTGATCTGGG 59.177 40.741 0.00 0.00 0.00 4.45
361 362 7.823310 CCCTGAGTATTCTATGATTTGATCTGG 59.177 40.741 0.00 0.00 0.00 3.86
362 363 8.373981 ACCCTGAGTATTCTATGATTTGATCTG 58.626 37.037 0.00 0.00 0.00 2.90
363 364 8.503428 ACCCTGAGTATTCTATGATTTGATCT 57.497 34.615 0.00 0.00 0.00 2.75
366 367 9.213777 ACTAACCCTGAGTATTCTATGATTTGA 57.786 33.333 0.00 0.00 0.00 2.69
367 368 9.482627 GACTAACCCTGAGTATTCTATGATTTG 57.517 37.037 0.00 0.00 0.00 2.32
368 369 8.652290 GGACTAACCCTGAGTATTCTATGATTT 58.348 37.037 0.00 0.00 0.00 2.17
369 370 7.789831 TGGACTAACCCTGAGTATTCTATGATT 59.210 37.037 0.00 0.00 38.00 2.57
370 371 7.306013 TGGACTAACCCTGAGTATTCTATGAT 58.694 38.462 0.00 0.00 38.00 2.45
371 372 6.679542 TGGACTAACCCTGAGTATTCTATGA 58.320 40.000 0.00 0.00 38.00 2.15
372 373 6.978674 TGGACTAACCCTGAGTATTCTATG 57.021 41.667 0.00 0.00 38.00 2.23
373 374 7.569111 ACAATGGACTAACCCTGAGTATTCTAT 59.431 37.037 0.00 0.00 38.00 1.98
374 375 6.901300 ACAATGGACTAACCCTGAGTATTCTA 59.099 38.462 0.00 0.00 38.00 2.10
375 376 5.726793 ACAATGGACTAACCCTGAGTATTCT 59.273 40.000 0.00 0.00 38.00 2.40
376 377 5.990668 ACAATGGACTAACCCTGAGTATTC 58.009 41.667 0.00 0.00 38.00 1.75
377 378 7.504926 TTACAATGGACTAACCCTGAGTATT 57.495 36.000 0.00 0.00 38.00 1.89
378 379 7.182206 AGTTTACAATGGACTAACCCTGAGTAT 59.818 37.037 0.00 0.00 38.00 2.12
379 380 6.499350 AGTTTACAATGGACTAACCCTGAGTA 59.501 38.462 0.00 0.00 38.00 2.59
380 381 5.309806 AGTTTACAATGGACTAACCCTGAGT 59.690 40.000 0.00 0.00 38.00 3.41
381 382 5.805728 AGTTTACAATGGACTAACCCTGAG 58.194 41.667 0.00 0.00 38.00 3.35
382 383 5.836024 AGTTTACAATGGACTAACCCTGA 57.164 39.130 0.00 0.00 38.00 3.86
383 384 5.414765 GGAAGTTTACAATGGACTAACCCTG 59.585 44.000 0.00 0.00 38.00 4.45
384 385 5.312443 AGGAAGTTTACAATGGACTAACCCT 59.688 40.000 0.00 0.00 38.00 4.34
385 386 5.567430 AGGAAGTTTACAATGGACTAACCC 58.433 41.667 0.00 0.00 38.00 4.11
386 387 7.336176 CCTAAGGAAGTTTACAATGGACTAACC 59.664 40.741 0.00 0.00 39.54 2.85
387 388 7.148289 GCCTAAGGAAGTTTACAATGGACTAAC 60.148 40.741 0.00 0.00 0.00 2.34
388 389 6.882678 GCCTAAGGAAGTTTACAATGGACTAA 59.117 38.462 0.00 0.00 0.00 2.24
389 390 6.412214 GCCTAAGGAAGTTTACAATGGACTA 58.588 40.000 0.00 0.00 0.00 2.59
390 391 5.254115 GCCTAAGGAAGTTTACAATGGACT 58.746 41.667 0.00 0.00 0.00 3.85
391 392 4.398358 GGCCTAAGGAAGTTTACAATGGAC 59.602 45.833 0.00 0.00 0.00 4.02
392 393 4.291249 AGGCCTAAGGAAGTTTACAATGGA 59.709 41.667 1.29 0.00 0.00 3.41
393 394 4.600062 AGGCCTAAGGAAGTTTACAATGG 58.400 43.478 1.29 0.00 0.00 3.16
394 395 5.253330 TGAGGCCTAAGGAAGTTTACAATG 58.747 41.667 4.42 0.00 0.00 2.82
395 396 5.514500 TGAGGCCTAAGGAAGTTTACAAT 57.486 39.130 4.42 0.00 0.00 2.71
396 397 4.986054 TGAGGCCTAAGGAAGTTTACAA 57.014 40.909 4.42 0.00 0.00 2.41
397 398 4.382685 CGATGAGGCCTAAGGAAGTTTACA 60.383 45.833 4.42 0.00 0.00 2.41
398 399 4.120589 CGATGAGGCCTAAGGAAGTTTAC 58.879 47.826 4.42 0.00 0.00 2.01
399 400 4.028131 TCGATGAGGCCTAAGGAAGTTTA 58.972 43.478 4.42 0.00 0.00 2.01
400 401 2.838202 TCGATGAGGCCTAAGGAAGTTT 59.162 45.455 4.42 0.00 0.00 2.66
401 402 2.432510 CTCGATGAGGCCTAAGGAAGTT 59.567 50.000 4.42 0.00 0.00 2.66
402 403 2.035632 CTCGATGAGGCCTAAGGAAGT 58.964 52.381 4.42 0.00 0.00 3.01
403 404 1.342819 CCTCGATGAGGCCTAAGGAAG 59.657 57.143 4.42 0.46 43.29 3.46
404 405 1.414158 CCTCGATGAGGCCTAAGGAA 58.586 55.000 4.42 0.00 43.29 3.36
405 406 3.133437 CCTCGATGAGGCCTAAGGA 57.867 57.895 4.42 0.00 43.29 3.36
413 414 5.681437 TTTCCTACGAAAATCCTCGATGAGG 60.681 44.000 6.51 6.51 41.65 3.86
414 415 4.569761 TCCTACGAAAATCCTCGATGAG 57.430 45.455 0.00 0.00 41.44 2.90
415 416 4.994907 TTCCTACGAAAATCCTCGATGA 57.005 40.909 0.00 0.00 41.44 2.92
416 417 5.581085 ACTTTTCCTACGAAAATCCTCGATG 59.419 40.000 0.00 0.00 44.82 3.84
417 418 5.731591 ACTTTTCCTACGAAAATCCTCGAT 58.268 37.500 0.00 0.00 44.82 3.59
418 419 5.143376 ACTTTTCCTACGAAAATCCTCGA 57.857 39.130 0.00 0.00 44.82 4.04
419 420 7.381678 CCTATACTTTTCCTACGAAAATCCTCG 59.618 40.741 0.00 0.00 44.82 4.63
420 421 8.419442 TCCTATACTTTTCCTACGAAAATCCTC 58.581 37.037 0.00 0.00 44.82 3.71
421 422 8.315220 TCCTATACTTTTCCTACGAAAATCCT 57.685 34.615 0.00 0.00 44.82 3.24
422 423 8.824781 GTTCCTATACTTTTCCTACGAAAATCC 58.175 37.037 0.00 0.00 44.82 3.01
423 424 9.374838 TGTTCCTATACTTTTCCTACGAAAATC 57.625 33.333 0.00 0.00 44.82 2.17
424 425 9.729281 TTGTTCCTATACTTTTCCTACGAAAAT 57.271 29.630 0.00 0.00 44.82 1.82
425 426 9.211485 CTTGTTCCTATACTTTTCCTACGAAAA 57.789 33.333 0.00 0.66 43.97 2.29
426 427 8.370182 ACTTGTTCCTATACTTTTCCTACGAAA 58.630 33.333 0.00 0.00 36.18 3.46
427 428 7.899973 ACTTGTTCCTATACTTTTCCTACGAA 58.100 34.615 0.00 0.00 0.00 3.85
428 429 7.472334 ACTTGTTCCTATACTTTTCCTACGA 57.528 36.000 0.00 0.00 0.00 3.43
464 465 9.214957 CCTACAAACCGAATGCATATATAGAAA 57.785 33.333 0.00 0.00 0.00 2.52
465 466 8.590204 TCCTACAAACCGAATGCATATATAGAA 58.410 33.333 0.00 0.00 0.00 2.10
466 467 8.129496 TCCTACAAACCGAATGCATATATAGA 57.871 34.615 0.00 0.00 0.00 1.98
467 468 8.771920 TTCCTACAAACCGAATGCATATATAG 57.228 34.615 0.00 0.00 0.00 1.31
468 469 9.733556 ATTTCCTACAAACCGAATGCATATATA 57.266 29.630 0.00 0.00 0.00 0.86
469 470 8.635765 ATTTCCTACAAACCGAATGCATATAT 57.364 30.769 0.00 0.00 0.00 0.86
470 471 8.995220 GTATTTCCTACAAACCGAATGCATATA 58.005 33.333 0.00 0.00 0.00 0.86
471 472 6.959639 ATTTCCTACAAACCGAATGCATAT 57.040 33.333 0.00 0.00 0.00 1.78
472 473 6.824196 TGTATTTCCTACAAACCGAATGCATA 59.176 34.615 0.00 0.00 37.40 3.14
473 474 5.650266 TGTATTTCCTACAAACCGAATGCAT 59.350 36.000 0.00 0.00 37.40 3.96
474 475 5.004448 TGTATTTCCTACAAACCGAATGCA 58.996 37.500 0.00 0.00 37.40 3.96
475 476 5.554822 TGTATTTCCTACAAACCGAATGC 57.445 39.130 0.00 0.00 37.40 3.56
476 477 8.203937 TGTATGTATTTCCTACAAACCGAATG 57.796 34.615 0.00 0.00 43.42 2.67
477 478 8.836413 CATGTATGTATTTCCTACAAACCGAAT 58.164 33.333 0.00 0.00 43.42 3.34
478 479 8.041919 TCATGTATGTATTTCCTACAAACCGAA 58.958 33.333 0.00 0.00 43.42 4.30
479 480 7.557724 TCATGTATGTATTTCCTACAAACCGA 58.442 34.615 0.00 0.00 43.42 4.69
480 481 7.780008 TCATGTATGTATTTCCTACAAACCG 57.220 36.000 0.00 0.00 43.42 4.44
485 486 9.607988 ACGAAATTCATGTATGTATTTCCTACA 57.392 29.630 21.11 0.00 44.61 2.74
488 489 9.273016 CCTACGAAATTCATGTATGTATTTCCT 57.727 33.333 21.11 15.79 44.61 3.36
489 490 9.268268 TCCTACGAAATTCATGTATGTATTTCC 57.732 33.333 21.11 10.79 44.61 3.13
522 523 9.965824 GTTTCCTTCAGAAATACAGAAAATGAA 57.034 29.630 0.00 0.00 45.99 2.57
523 524 9.354673 AGTTTCCTTCAGAAATACAGAAAATGA 57.645 29.630 0.00 0.00 45.99 2.57
526 527 9.621629 TGTAGTTTCCTTCAGAAATACAGAAAA 57.378 29.630 0.00 0.00 45.99 2.29
527 528 9.793259 ATGTAGTTTCCTTCAGAAATACAGAAA 57.207 29.630 0.00 0.00 45.99 2.52
531 532 9.832445 GGATATGTAGTTTCCTTCAGAAATACA 57.168 33.333 0.00 0.00 45.99 2.29
532 533 9.832445 TGGATATGTAGTTTCCTTCAGAAATAC 57.168 33.333 0.00 0.00 45.99 1.89
533 534 9.832445 GTGGATATGTAGTTTCCTTCAGAAATA 57.168 33.333 0.00 0.00 45.99 1.40
534 535 8.552296 AGTGGATATGTAGTTTCCTTCAGAAAT 58.448 33.333 0.00 0.00 45.99 2.17
535 536 7.918076 AGTGGATATGTAGTTTCCTTCAGAAA 58.082 34.615 0.00 0.00 42.28 2.52
536 537 7.180229 TGAGTGGATATGTAGTTTCCTTCAGAA 59.820 37.037 0.00 0.00 0.00 3.02
537 538 6.667848 TGAGTGGATATGTAGTTTCCTTCAGA 59.332 38.462 0.00 0.00 0.00 3.27
538 539 6.878317 TGAGTGGATATGTAGTTTCCTTCAG 58.122 40.000 0.00 0.00 0.00 3.02
539 540 6.867519 TGAGTGGATATGTAGTTTCCTTCA 57.132 37.500 0.00 0.00 0.00 3.02
540 541 8.451748 GTTTTGAGTGGATATGTAGTTTCCTTC 58.548 37.037 0.00 0.00 0.00 3.46
541 542 7.942341 TGTTTTGAGTGGATATGTAGTTTCCTT 59.058 33.333 0.00 0.00 0.00 3.36
542 543 7.390718 GTGTTTTGAGTGGATATGTAGTTTCCT 59.609 37.037 0.00 0.00 0.00 3.36
543 544 7.174253 TGTGTTTTGAGTGGATATGTAGTTTCC 59.826 37.037 0.00 0.00 0.00 3.13
544 545 8.094798 TGTGTTTTGAGTGGATATGTAGTTTC 57.905 34.615 0.00 0.00 0.00 2.78
545 546 8.635765 ATGTGTTTTGAGTGGATATGTAGTTT 57.364 30.769 0.00 0.00 0.00 2.66
546 547 8.635765 AATGTGTTTTGAGTGGATATGTAGTT 57.364 30.769 0.00 0.00 0.00 2.24
547 548 8.635765 AAATGTGTTTTGAGTGGATATGTAGT 57.364 30.769 0.00 0.00 0.00 2.73
550 551 8.855110 TGTAAAATGTGTTTTGAGTGGATATGT 58.145 29.630 0.00 0.00 38.01 2.29
551 552 9.128107 GTGTAAAATGTGTTTTGAGTGGATATG 57.872 33.333 0.00 0.00 38.01 1.78
552 553 8.020819 CGTGTAAAATGTGTTTTGAGTGGATAT 58.979 33.333 0.00 0.00 38.01 1.63
553 554 7.012515 ACGTGTAAAATGTGTTTTGAGTGGATA 59.987 33.333 0.00 0.00 38.01 2.59
554 555 6.183360 ACGTGTAAAATGTGTTTTGAGTGGAT 60.183 34.615 0.00 0.00 38.01 3.41
555 556 5.124138 ACGTGTAAAATGTGTTTTGAGTGGA 59.876 36.000 0.00 0.00 38.01 4.02
556 557 5.336744 ACGTGTAAAATGTGTTTTGAGTGG 58.663 37.500 0.00 0.00 38.01 4.00
557 558 6.631238 CCTACGTGTAAAATGTGTTTTGAGTG 59.369 38.462 0.00 0.00 38.01 3.51
558 559 6.539464 TCCTACGTGTAAAATGTGTTTTGAGT 59.461 34.615 0.00 0.00 38.01 3.41
559 560 6.950545 TCCTACGTGTAAAATGTGTTTTGAG 58.049 36.000 0.00 0.00 38.01 3.02
560 561 6.922247 TCCTACGTGTAAAATGTGTTTTGA 57.078 33.333 0.00 0.00 38.01 2.69
561 562 6.967767 TGTTCCTACGTGTAAAATGTGTTTTG 59.032 34.615 0.00 0.00 38.01 2.44
562 563 7.086230 TGTTCCTACGTGTAAAATGTGTTTT 57.914 32.000 0.00 0.00 40.48 2.43
563 564 6.680874 TGTTCCTACGTGTAAAATGTGTTT 57.319 33.333 0.00 0.00 0.00 2.83
564 565 6.238538 CCTTGTTCCTACGTGTAAAATGTGTT 60.239 38.462 0.00 0.00 0.00 3.32
565 566 5.237779 CCTTGTTCCTACGTGTAAAATGTGT 59.762 40.000 0.00 0.00 0.00 3.72
566 567 5.685841 CCTTGTTCCTACGTGTAAAATGTG 58.314 41.667 0.00 0.00 0.00 3.21
567 568 4.214758 GCCTTGTTCCTACGTGTAAAATGT 59.785 41.667 0.00 0.00 0.00 2.71
568 569 4.214545 TGCCTTGTTCCTACGTGTAAAATG 59.785 41.667 0.00 0.00 0.00 2.32
569 570 4.391155 TGCCTTGTTCCTACGTGTAAAAT 58.609 39.130 0.00 0.00 0.00 1.82
570 571 3.806380 TGCCTTGTTCCTACGTGTAAAA 58.194 40.909 0.00 0.00 0.00 1.52
571 572 3.472283 TGCCTTGTTCCTACGTGTAAA 57.528 42.857 0.00 0.00 0.00 2.01
572 573 3.181463 ACTTGCCTTGTTCCTACGTGTAA 60.181 43.478 0.00 0.00 0.00 2.41
573 574 2.366266 ACTTGCCTTGTTCCTACGTGTA 59.634 45.455 0.00 0.00 0.00 2.90
574 575 1.140252 ACTTGCCTTGTTCCTACGTGT 59.860 47.619 0.00 0.00 0.00 4.49
575 576 1.798813 GACTTGCCTTGTTCCTACGTG 59.201 52.381 0.00 0.00 0.00 4.49
576 577 1.414919 TGACTTGCCTTGTTCCTACGT 59.585 47.619 0.00 0.00 0.00 3.57
577 578 2.163818 TGACTTGCCTTGTTCCTACG 57.836 50.000 0.00 0.00 0.00 3.51
578 579 5.241728 AGAAATTGACTTGCCTTGTTCCTAC 59.758 40.000 0.00 0.00 0.00 3.18
579 580 5.385198 AGAAATTGACTTGCCTTGTTCCTA 58.615 37.500 0.00 0.00 0.00 2.94
580 581 4.218312 AGAAATTGACTTGCCTTGTTCCT 58.782 39.130 0.00 0.00 0.00 3.36
581 582 4.590850 AGAAATTGACTTGCCTTGTTCC 57.409 40.909 0.00 0.00 0.00 3.62
582 583 8.419076 TTTTAAGAAATTGACTTGCCTTGTTC 57.581 30.769 7.97 0.00 0.00 3.18
583 584 8.829612 CATTTTAAGAAATTGACTTGCCTTGTT 58.170 29.630 7.97 0.00 33.25 2.83
584 585 7.442062 CCATTTTAAGAAATTGACTTGCCTTGT 59.558 33.333 7.97 0.00 33.25 3.16
585 586 7.571798 GCCATTTTAAGAAATTGACTTGCCTTG 60.572 37.037 7.97 2.94 33.25 3.61
586 587 6.427853 GCCATTTTAAGAAATTGACTTGCCTT 59.572 34.615 7.97 0.00 33.25 4.35
587 588 5.934043 GCCATTTTAAGAAATTGACTTGCCT 59.066 36.000 7.97 0.00 33.25 4.75
588 589 5.700373 TGCCATTTTAAGAAATTGACTTGCC 59.300 36.000 7.97 0.00 33.25 4.52
589 590 6.783892 TGCCATTTTAAGAAATTGACTTGC 57.216 33.333 7.97 3.69 33.25 4.01
590 591 9.601971 CATTTGCCATTTTAAGAAATTGACTTG 57.398 29.630 7.97 0.00 33.25 3.16
591 592 9.341078 ACATTTGCCATTTTAAGAAATTGACTT 57.659 25.926 4.11 4.11 33.25 3.01
592 593 8.907222 ACATTTGCCATTTTAAGAAATTGACT 57.093 26.923 0.00 0.00 33.25 3.41
593 594 8.992073 AGACATTTGCCATTTTAAGAAATTGAC 58.008 29.630 0.00 0.00 33.25 3.18
597 598 9.822185 GGATAGACATTTGCCATTTTAAGAAAT 57.178 29.630 0.00 0.00 35.90 2.17
598 599 9.034800 AGGATAGACATTTGCCATTTTAAGAAA 57.965 29.630 0.00 0.00 0.00 2.52
599 600 8.593945 AGGATAGACATTTGCCATTTTAAGAA 57.406 30.769 0.00 0.00 0.00 2.52
600 601 9.866655 ATAGGATAGACATTTGCCATTTTAAGA 57.133 29.630 0.00 0.00 0.00 2.10
602 603 9.639563 TGATAGGATAGACATTTGCCATTTTAA 57.360 29.630 0.00 0.00 0.00 1.52
603 604 9.639563 TTGATAGGATAGACATTTGCCATTTTA 57.360 29.630 0.00 0.00 0.00 1.52
604 605 8.537728 TTGATAGGATAGACATTTGCCATTTT 57.462 30.769 0.00 0.00 0.00 1.82
605 606 8.537728 TTTGATAGGATAGACATTTGCCATTT 57.462 30.769 0.00 0.00 0.00 2.32
606 607 8.716674 ATTTGATAGGATAGACATTTGCCATT 57.283 30.769 0.00 0.00 0.00 3.16
607 608 8.716674 AATTTGATAGGATAGACATTTGCCAT 57.283 30.769 0.00 0.00 0.00 4.40
608 609 7.231317 GGAATTTGATAGGATAGACATTTGCCA 59.769 37.037 0.00 0.00 0.00 4.92
609 610 7.449704 AGGAATTTGATAGGATAGACATTTGCC 59.550 37.037 0.00 0.00 0.00 4.52
610 611 8.401490 AGGAATTTGATAGGATAGACATTTGC 57.599 34.615 0.00 0.00 0.00 3.68
639 640 9.406113 GTCTCAAGGTAGGAATTAGAAGTAGTA 57.594 37.037 0.00 0.00 0.00 1.82
640 641 7.342541 GGTCTCAAGGTAGGAATTAGAAGTAGT 59.657 40.741 0.00 0.00 0.00 2.73
641 642 7.562088 AGGTCTCAAGGTAGGAATTAGAAGTAG 59.438 40.741 0.00 0.00 0.00 2.57
642 643 7.420029 AGGTCTCAAGGTAGGAATTAGAAGTA 58.580 38.462 0.00 0.00 0.00 2.24
643 644 6.265304 AGGTCTCAAGGTAGGAATTAGAAGT 58.735 40.000 0.00 0.00 0.00 3.01
644 645 6.800072 AGGTCTCAAGGTAGGAATTAGAAG 57.200 41.667 0.00 0.00 0.00 2.85
645 646 7.147707 GCTAAGGTCTCAAGGTAGGAATTAGAA 60.148 40.741 0.00 0.00 0.00 2.10
646 647 6.324254 GCTAAGGTCTCAAGGTAGGAATTAGA 59.676 42.308 0.00 0.00 0.00 2.10
647 648 6.098409 TGCTAAGGTCTCAAGGTAGGAATTAG 59.902 42.308 0.00 0.00 0.00 1.73
648 649 5.962031 TGCTAAGGTCTCAAGGTAGGAATTA 59.038 40.000 0.00 0.00 0.00 1.40
649 650 4.783227 TGCTAAGGTCTCAAGGTAGGAATT 59.217 41.667 0.00 0.00 0.00 2.17
650 651 4.362677 TGCTAAGGTCTCAAGGTAGGAAT 58.637 43.478 0.00 0.00 0.00 3.01
651 652 3.786553 TGCTAAGGTCTCAAGGTAGGAA 58.213 45.455 0.00 0.00 0.00 3.36
652 653 3.468071 TGCTAAGGTCTCAAGGTAGGA 57.532 47.619 0.00 0.00 0.00 2.94
653 654 4.130286 CTTGCTAAGGTCTCAAGGTAGG 57.870 50.000 0.00 0.00 34.98 3.18
676 677 2.622942 GTGCAGAGGGTCAAAACATTGA 59.377 45.455 0.00 0.00 0.00 2.57
677 678 2.624838 AGTGCAGAGGGTCAAAACATTG 59.375 45.455 0.00 0.00 0.00 2.82
678 679 2.624838 CAGTGCAGAGGGTCAAAACATT 59.375 45.455 0.00 0.00 0.00 2.71
679 680 2.233271 CAGTGCAGAGGGTCAAAACAT 58.767 47.619 0.00 0.00 0.00 2.71
680 681 1.679139 CAGTGCAGAGGGTCAAAACA 58.321 50.000 0.00 0.00 0.00 2.83
681 682 0.312102 GCAGTGCAGAGGGTCAAAAC 59.688 55.000 11.09 0.00 0.00 2.43
682 683 0.106769 TGCAGTGCAGAGGGTCAAAA 60.107 50.000 15.37 0.00 33.32 2.44
683 684 0.819259 GTGCAGTGCAGAGGGTCAAA 60.819 55.000 20.42 0.00 40.08 2.69
684 685 1.227943 GTGCAGTGCAGAGGGTCAA 60.228 57.895 20.42 0.00 40.08 3.18
685 686 2.142761 AGTGCAGTGCAGAGGGTCA 61.143 57.895 20.42 0.00 40.08 4.02
686 687 1.670406 CAGTGCAGTGCAGAGGGTC 60.670 63.158 20.42 5.44 40.08 4.46
687 688 2.429058 CAGTGCAGTGCAGAGGGT 59.571 61.111 20.42 0.00 40.08 4.34
688 689 3.054503 GCAGTGCAGTGCAGAGGG 61.055 66.667 35.84 9.38 43.41 4.30
689 690 2.032223 AGCAGTGCAGTGCAGAGG 59.968 61.111 39.87 12.04 46.60 3.69
690 691 2.033755 GGAGCAGTGCAGTGCAGAG 61.034 63.158 39.87 15.09 46.60 3.35
691 692 2.031616 GGAGCAGTGCAGTGCAGA 59.968 61.111 39.87 0.00 46.60 4.26
711 712 9.405587 GTCTTTGCTGCTAAACAATAAACAATA 57.594 29.630 0.00 0.00 0.00 1.90
712 713 7.114811 CGTCTTTGCTGCTAAACAATAAACAAT 59.885 33.333 0.00 0.00 0.00 2.71
713 714 6.416455 CGTCTTTGCTGCTAAACAATAAACAA 59.584 34.615 0.00 0.00 0.00 2.83
714 715 5.912396 CGTCTTTGCTGCTAAACAATAAACA 59.088 36.000 0.00 0.00 0.00 2.83
715 716 5.342259 CCGTCTTTGCTGCTAAACAATAAAC 59.658 40.000 0.00 0.00 0.00 2.01
716 717 5.239744 TCCGTCTTTGCTGCTAAACAATAAA 59.760 36.000 0.00 0.00 0.00 1.40
717 718 4.757657 TCCGTCTTTGCTGCTAAACAATAA 59.242 37.500 0.00 0.00 0.00 1.40
765 768 2.253414 GACATTTGGAAGGACGCGCC 62.253 60.000 5.73 9.03 0.00 6.53
814 817 4.452733 GGAGTTGTCGGGCGGGAG 62.453 72.222 0.00 0.00 0.00 4.30
819 822 3.316573 CTGGGAGGAGTTGTCGGGC 62.317 68.421 0.00 0.00 0.00 6.13
846 849 4.038080 CGCGAGTTTTGGGTGGGC 62.038 66.667 0.00 0.00 0.00 5.36
1131 1134 4.284550 GCAGGGTCAACCAGGCCA 62.285 66.667 5.01 0.00 46.80 5.36
1296 1302 1.307084 GCCCTGGTAGAAGTCCCCT 60.307 63.158 0.00 0.00 0.00 4.79
2293 2380 0.620556 AGTGATGGTGGTAGCCAAGG 59.379 55.000 0.00 0.00 42.48 3.61
2581 3817 4.888326 AAGAGAAGCAAGTGAGAGACAT 57.112 40.909 0.00 0.00 0.00 3.06
2606 3842 1.711206 GCCGTGTTTGGAGACTACTC 58.289 55.000 0.00 0.00 41.94 2.59
2856 4568 6.638063 CAGACATGATTAAAACTTGTGTGTGG 59.362 38.462 0.00 0.00 34.51 4.17
3019 4732 5.243730 TGAAAGCATCCTAACCTTTTTCTGG 59.756 40.000 0.00 0.00 0.00 3.86
3306 5040 1.871676 CAATCCGGCAGATGTGAGATG 59.128 52.381 0.00 0.00 34.56 2.90
3307 5041 1.813092 GCAATCCGGCAGATGTGAGAT 60.813 52.381 0.00 0.00 34.56 2.75
3308 5042 0.462581 GCAATCCGGCAGATGTGAGA 60.463 55.000 0.00 0.00 34.56 3.27
3309 5043 0.745486 TGCAATCCGGCAGATGTGAG 60.745 55.000 0.00 0.00 39.25 3.51
3310 5044 1.026182 GTGCAATCCGGCAGATGTGA 61.026 55.000 0.00 0.00 45.96 3.58
3311 5045 1.307355 TGTGCAATCCGGCAGATGTG 61.307 55.000 0.00 0.00 45.96 3.21
3312 5046 1.002257 TGTGCAATCCGGCAGATGT 60.002 52.632 0.00 0.00 45.96 3.06
3313 5047 1.721664 CCTGTGCAATCCGGCAGATG 61.722 60.000 0.00 0.00 45.96 2.90
3314 5048 1.452651 CCTGTGCAATCCGGCAGAT 60.453 57.895 0.00 0.00 45.96 2.90
3315 5049 1.913951 ATCCTGTGCAATCCGGCAGA 61.914 55.000 0.00 0.00 45.96 4.26
3316 5050 1.033746 AATCCTGTGCAATCCGGCAG 61.034 55.000 0.00 0.00 45.96 4.85
3317 5051 1.001020 AATCCTGTGCAATCCGGCA 60.001 52.632 0.00 0.00 42.53 5.69
3318 5052 0.749454 AGAATCCTGTGCAATCCGGC 60.749 55.000 0.00 0.00 0.00 6.13
3319 5053 1.019673 CAGAATCCTGTGCAATCCGG 58.980 55.000 0.00 0.00 35.70 5.14
3331 5065 6.581171 ACAAAATGAGAGGAAACAGAATCC 57.419 37.500 0.00 0.00 37.22 3.01
3332 5066 8.787852 AGTAACAAAATGAGAGGAAACAGAATC 58.212 33.333 0.00 0.00 0.00 2.52
3333 5067 8.697507 AGTAACAAAATGAGAGGAAACAGAAT 57.302 30.769 0.00 0.00 0.00 2.40
3334 5068 8.519799 AAGTAACAAAATGAGAGGAAACAGAA 57.480 30.769 0.00 0.00 0.00 3.02
3335 5069 9.052759 GTAAGTAACAAAATGAGAGGAAACAGA 57.947 33.333 0.00 0.00 0.00 3.41
3336 5070 8.836413 TGTAAGTAACAAAATGAGAGGAAACAG 58.164 33.333 0.00 0.00 34.29 3.16
3337 5071 8.740123 TGTAAGTAACAAAATGAGAGGAAACA 57.260 30.769 0.00 0.00 34.29 2.83
3338 5072 9.612620 CATGTAAGTAACAAAATGAGAGGAAAC 57.387 33.333 0.00 0.00 42.70 2.78
3339 5073 9.349713 ACATGTAAGTAACAAAATGAGAGGAAA 57.650 29.630 0.00 0.00 42.70 3.13
3340 5074 8.783093 CACATGTAAGTAACAAAATGAGAGGAA 58.217 33.333 0.00 0.00 42.70 3.36
3341 5075 7.094805 GCACATGTAAGTAACAAAATGAGAGGA 60.095 37.037 0.00 0.00 42.70 3.71
3342 5076 7.023575 GCACATGTAAGTAACAAAATGAGAGG 58.976 38.462 0.00 0.00 42.70 3.69
3343 5077 7.810658 AGCACATGTAAGTAACAAAATGAGAG 58.189 34.615 0.00 0.00 42.70 3.20
3344 5078 7.744087 AGCACATGTAAGTAACAAAATGAGA 57.256 32.000 0.00 0.00 42.70 3.27
3408 5203 3.321396 GCATAGTGGGTACTTAGGTCTCC 59.679 52.174 0.00 0.00 38.36 3.71
3773 5574 7.315890 AGCTGAGTAAAGGAAAAATGTAATGC 58.684 34.615 0.00 0.00 0.00 3.56
3778 5579 6.071896 GCCTAAGCTGAGTAAAGGAAAAATGT 60.072 38.462 0.00 0.00 35.50 2.71
3781 5582 5.959618 GCCTAAGCTGAGTAAAGGAAAAA 57.040 39.130 0.00 0.00 35.50 1.94
3830 5631 9.878667 TTTGTCAATATCAAGATGAATGCAATT 57.121 25.926 0.00 0.00 40.93 2.32
4278 6081 1.336517 CCGTCTACAGCCGAAAGAACA 60.337 52.381 0.00 0.00 0.00 3.18
4279 6082 1.347320 CCGTCTACAGCCGAAAGAAC 58.653 55.000 0.00 0.00 0.00 3.01
4289 6092 2.258591 ACGTGCTGCCGTCTACAG 59.741 61.111 9.77 0.00 35.95 2.74
4588 6391 0.818445 TTTAGGGCGTTGCGGAAACA 60.818 50.000 0.00 0.00 38.84 2.83
4732 6536 1.952102 GCATGCAGAATGTGGGTGGG 61.952 60.000 14.21 0.00 38.65 4.61
4789 6594 5.714333 TCTTTAGGCCAACATCATTAGCAAA 59.286 36.000 5.01 0.00 0.00 3.68
4808 6613 6.388619 ACTGGAAGGATTTAGGCTTCTTTA 57.611 37.500 0.00 0.00 39.30 1.85
4844 6649 2.045524 GGAATCCCAGCATCTCTCTCA 58.954 52.381 0.00 0.00 0.00 3.27
4847 6652 2.092753 TGTTGGAATCCCAGCATCTCTC 60.093 50.000 0.00 0.00 46.71 3.20
4849 6654 2.425143 TGTTGGAATCCCAGCATCTC 57.575 50.000 0.00 0.00 46.71 2.75
4856 6661 3.235750 TGACAACATGTTGGAATCCCA 57.764 42.857 35.20 21.34 44.45 4.37
4872 6679 1.271325 ACATTCCATGCCTCGTTGACA 60.271 47.619 0.00 0.00 0.00 3.58
4877 6684 2.425143 ATTCACATTCCATGCCTCGT 57.575 45.000 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.