AutoCloner

Multiple sequence alignment - TraesCS5D01G138800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS5D01G138800	chr5D	100.000	7260	0	0	1	7260	221006265	221013524	0.000000e+00	13407.0
1	TraesCS5D01G138800	chr5D	87.237	619	31	13	2260	2847	118208113	118207512	0.000000e+00	662.0
2	TraesCS5D01G138800	chr5D	86.174	622	33	17	2260	2847	87545975	87545373	2.220000e-174	623.0
3	TraesCS5D01G138800	chr5D	90.582	361	12	3	3328	3666	118207143	118206783	6.640000e-125	459.0
4	TraesCS5D01G138800	chr5D	90.305	361	13	3	3328	3666	87545004	87544644	3.090000e-123	453.0
5	TraesCS5D01G138800	chr5D	88.736	364	16	5	3328	3666	122072634	122072271	8.710000e-114	422.0
6	TraesCS5D01G138800	chr5D	92.857	280	19	1	2850	3129	118207568	118207290	8.770000e-109	405.0
7	TraesCS5D01G138800	chr5D	92.500	280	20	1	2850	3129	87545429	87545151	4.080000e-107	399.0
8	TraesCS5D01G138800	chr5D	92.889	225	11	4	2626	2847	122073177	122072955	9.090000e-84	322.0
9	TraesCS5D01G138800	chr5D	88.623	167	15	4	26	189	455751680	455751515	4.440000e-47	200.0
10	TraesCS5D01G138800	chr5D	89.873	158	12	4	37	190	557042425	557042582	4.440000e-47	200.0
11	TraesCS5D01G138800	chr5D	87.975	158	16	3	37	191	396949979	396950136	4.470000e-42	183.0
12	TraesCS5D01G138800	chr5D	86.029	136	10	2	316	442	72208730	72208595	3.530000e-28	137.0
13	TraesCS5D01G138800	chr5D	84.000	150	14	3	303	442	469406931	469407080	1.270000e-27	135.0
14	TraesCS5D01G138800	chr5D	91.892	74	3	2	3258	3328	118207251	118207178	4.630000e-17	100.0
15	TraesCS5D01G138800	chr5D	91.667	60	4	1	6715	6774	221012926	221012984	1.680000e-11	82.4
16	TraesCS5D01G138800	chr5D	91.667	60	4	1	6662	6720	221012979	221013038	1.680000e-11	82.4
17	TraesCS5D01G138800	chr5D	97.674	43	1	0	539	581	221006719	221006761	2.810000e-09	75.0
18	TraesCS5D01G138800	chr5D	97.674	43	1	0	455	497	221006803	221006845	2.810000e-09	75.0
19	TraesCS5D01G138800	chr5B	95.825	3521	57	27	539	3995	243743323	243746817	0.000000e+00	5605.0
20	TraesCS5D01G138800	chr5B	97.517	1208	26	3	3992	5195	243746939	243748146	0.000000e+00	2061.0
21	TraesCS5D01G138800	chr5B	94.477	1195	22	12	5318	6507	243748144	243749299	0.000000e+00	1801.0
22	TraesCS5D01G138800	chr5B	86.893	618	33	16	2260	2847	117248872	117249471	0.000000e+00	649.0
23	TraesCS5D01G138800	chr5B	89.751	361	14	4	3328	3666	117249842	117250201	2.400000e-119	440.0
24	TraesCS5D01G138800	chr5B	92.527	281	19	2	2850	3129	93476454	93476175	1.130000e-107	401.0
25	TraesCS5D01G138800	chr5B	92.674	273	19	1	2854	3126	128671730	128672001	6.830000e-105	392.0
26	TraesCS5D01G138800	chr5B	91.071	280	23	2	2850	3128	117249415	117249693	1.910000e-100	377.0
27	TraesCS5D01G138800	chr5B	91.544	272	5	4	6742	7000	243749721	243749987	6.930000e-95	359.0
28	TraesCS5D01G138800	chr5B	91.630	227	12	4	2626	2847	93476622	93476398	2.540000e-79	307.0
29	TraesCS5D01G138800	chr5B	89.899	198	5	8	6561	6756	243749299	243749483	2.620000e-59	241.0
30	TraesCS5D01G138800	chr5B	94.815	135	7	0	5190	5324	538274710	538274844	2.050000e-50	211.0
31	TraesCS5D01G138800	chr5B	94.203	138	6	2	5183	5320	476637931	476638066	7.380000e-50	209.0
32	TraesCS5D01G138800	chr5B	87.342	158	17	2	37	191	656237968	656238125	2.080000e-40	178.0
33	TraesCS5D01G138800	chr5B	86.792	159	16	4	37	191	516546057	516546214	9.680000e-39	172.0
34	TraesCS5D01G138800	chr5B	86.709	158	18	2	37	191	669193184	669193341	9.680000e-39	172.0
35	TraesCS5D01G138800	chr5B	88.000	100	8	2	207	302	243743205	243743304	1.660000e-21	115.0
36	TraesCS5D01G138800	chr5B	91.429	70	4	2	3251	3320	128672038	128672105	2.160000e-15	95.3
37	TraesCS5D01G138800	chr5B	92.063	63	5	0	3258	3320	93476136	93476074	1.000000e-13	89.8
38	TraesCS5D01G138800	chr5B	91.667	60	4	1	6715	6774	243749387	243749445	1.680000e-11	82.4
39	TraesCS5D01G138800	chr5A	94.881	2403	62	20	2626	5010	295318428	295320787	0.000000e+00	3699.0
40	TraesCS5D01G138800	chr5A	96.363	2117	34	11	539	2629	295316305	295318404	0.000000e+00	3443.0
41	TraesCS5D01G138800	chr5A	94.931	868	13	8	5870	6716	295321355	295322212	0.000000e+00	1330.0
42	TraesCS5D01G138800	chr5A	90.609	394	12	5	5318	5691	295320931	295321319	3.910000e-137	499.0
43	TraesCS5D01G138800	chr5A	91.429	280	23	1	2850	3129	80515623	80515345	4.110000e-102	383.0
44	TraesCS5D01G138800	chr5A	95.339	236	11	0	6295	6530	295324611	295324846	6.880000e-100	375.0
45	TraesCS5D01G138800	chr5A	91.304	253	13	3	6717	6961	295324116	295324367	3.240000e-88	337.0
46	TraesCS5D01G138800	chr5A	92.609	230	13	3	6695	6922	295324970	295325197	1.950000e-85	327.0
47	TraesCS5D01G138800	chr5A	94.904	157	4	2	5039	5195	295320781	295320933	7.280000e-60	243.0
48	TraesCS5D01G138800	chr5A	91.837	147	6	5	5181	5327	383791476	383791616	4.440000e-47	200.0
49	TraesCS5D01G138800	chr5A	82.589	224	13	16	3322	3520	412224030	412223808	2.690000e-39	174.0
50	TraesCS5D01G138800	chr5A	91.209	91	6	2	7059	7147	692457155	692457245	9.890000e-24	122.0
51	TraesCS5D01G138800	chr5A	93.103	58	3	1	6664	6720	295324991	295325048	4.670000e-12	84.2
52	TraesCS5D01G138800	chr5A	97.059	34	1	0	491	524	295316285	295316318	2.830000e-04	58.4
53	TraesCS5D01G138800	chr5A	100.000	29	0	0	4881	4909	567533905	567533877	4.000000e-03	54.7
54	TraesCS5D01G138800	chr4A	86.205	1950	142	49	3322	5190	9635025	9636928	0.000000e+00	1993.0
55	TraesCS5D01G138800	chr4A	85.087	1663	130	48	3590	5190	554702471	554704077	0.000000e+00	1589.0
56	TraesCS5D01G138800	chr4A	84.318	1473	117	45	3778	5190	557659005	557657587	0.000000e+00	1336.0
57	TraesCS5D01G138800	chr4A	85.599	618	36	18	2260	2847	538719805	538719211	3.750000e-167	599.0
58	TraesCS5D01G138800	chr4A	87.500	360	31	3	2850	3209	9634570	9634915	3.150000e-108	403.0
59	TraesCS5D01G138800	chr4A	94.660	206	8	2	2626	2830	9634406	9634609	4.230000e-82	316.0
60	TraesCS5D01G138800	chr4A	82.597	362	48	10	5365	5723	9637096	9637445	9.150000e-79	305.0
61	TraesCS5D01G138800	chr4A	91.216	148	7	5	5181	5328	33889294	33889153	5.750000e-46	196.0
62	TraesCS5D01G138800	chr4A	93.284	134	8	1	5188	5320	660520592	660520459	5.750000e-46	196.0
63	TraesCS5D01G138800	chr4A	86.250	160	17	4	37	192	352631625	352631783	1.250000e-37	169.0
64	TraesCS5D01G138800	chr4A	84.559	136	12	2	316	442	657488577	657488442	7.650000e-25	126.0
65	TraesCS5D01G138800	chr4A	89.189	74	5	2	3258	3328	538718956	538718883	1.000000e-13	89.8
66	TraesCS5D01G138800	chr3D	87.306	1804	122	42	3442	5190	579691380	579693131	0.000000e+00	1964.0
67	TraesCS5D01G138800	chr3D	82.873	362	47	11	5365	5723	579693285	579693634	1.970000e-80	311.0
68	TraesCS5D01G138800	chr3D	90.833	120	7	1	5745	5860	445035251	445035132	2.710000e-34	158.0
69	TraesCS5D01G138800	chr3A	86.522	1803	132	46	3442	5190	607849041	607850786	0.000000e+00	1881.0
70	TraesCS5D01G138800	chr3A	86.419	1804	138	47	3442	5190	714791778	714793529	0.000000e+00	1875.0
71	TraesCS5D01G138800	chr3A	91.961	311	22	2	5882	6192	607851378	607851685	4.020000e-117	433.0
72	TraesCS5D01G138800	chr3A	92.434	304	20	2	5889	6192	714794123	714794423	1.450000e-116	431.0
73	TraesCS5D01G138800	chr3A	84.416	385	39	10	4818	5190	679872801	679873176	6.930000e-95	359.0
74	TraesCS5D01G138800	chr3A	91.216	148	7	5	5181	5328	218773963	218773822	5.750000e-46	196.0
75	TraesCS5D01G138800	chr3A	90.323	124	11	1	5744	5867	34829401	34829523	2.100000e-35	161.0
76	TraesCS5D01G138800	chr3A	89.916	119	8	1	5746	5860	203993392	203993510	4.540000e-32	150.0
77	TraesCS5D01G138800	chr3A	89.344	122	9	1	5742	5859	522176557	522176678	4.540000e-32	150.0
78	TraesCS5D01G138800	chr3A	96.203	79	3	0	316	394	90298865	90298787	5.910000e-26	130.0
79	TraesCS5D01G138800	chr1B	89.142	1317	81	22	3505	4800	146944612	146943337	0.000000e+00	1583.0
80	TraesCS5D01G138800	chr1B	89.015	1320	85	20	3502	4800	116253711	116254991	0.000000e+00	1580.0
81	TraesCS5D01G138800	chr1B	88.107	1194	81	29	3442	4612	143105456	143106611	0.000000e+00	1362.0
82	TraesCS5D01G138800	chr1B	87.930	1193	81	27	3442	4612	596179454	596180605	0.000000e+00	1347.0
83	TraesCS5D01G138800	chr1B	84.666	613	42	23	2260	2847	640618093	640617508	1.370000e-156	564.0
84	TraesCS5D01G138800	chr1B	89.488	371	14	10	2261	2630	596179010	596179356	5.170000e-121	446.0
85	TraesCS5D01G138800	chr1B	91.640	311	23	2	5882	6192	143107234	143107541	1.870000e-115	427.0
86	TraesCS5D01G138800	chr1B	94.030	134	8	0	5192	5325	102627726	102627859	3.430000e-48	204.0
87	TraesCS5D01G138800	chr1A	88.255	1192	83	29	3442	4612	86041013	86039858	0.000000e+00	1373.0
88	TraesCS5D01G138800	chr1A	90.819	403	13	11	3322	3701	556839513	556839914	1.080000e-142	518.0
89	TraesCS5D01G138800	chr1A	82.143	364	46	12	5365	5723	86039667	86039318	1.980000e-75	294.0
90	TraesCS5D01G138800	chr1A	89.189	74	5	2	3258	3328	556839409	556839482	1.000000e-13	89.8
91	TraesCS5D01G138800	chr1D	87.770	1202	79	27	3442	4612	439407450	439408614	0.000000e+00	1343.0
92	TraesCS5D01G138800	chr1D	89.021	1093	65	18	3532	4605	64340146	64341202	0.000000e+00	1303.0
93	TraesCS5D01G138800	chr1D	89.488	371	15	9	2261	2630	439407005	439407352	1.440000e-121	448.0
94	TraesCS5D01G138800	chr1D	91.987	312	21	3	5882	6192	439409238	439409546	1.120000e-117	435.0
95	TraesCS5D01G138800	chr1D	87.668	373	25	7	2260	2629	464438989	464439343	1.460000e-111	414.0
96	TraesCS5D01G138800	chr1D	82.920	363	45	12	5365	5723	439408805	439409154	1.970000e-80	311.0
97	TraesCS5D01G138800	chr1D	81.717	361	53	9	5365	5723	64341364	64341713	9.220000e-74	289.0
98	TraesCS5D01G138800	chr1D	85.561	187	13	8	2261	2447	64339494	64339666	4.470000e-42	183.0
99	TraesCS5D01G138800	chr6A	87.573	1191	82	34	3442	4612	121721541	121720397	0.000000e+00	1319.0
100	TraesCS5D01G138800	chr6A	83.087	1082	98	36	4166	5190	137659376	137658323	0.000000e+00	905.0
101	TraesCS5D01G138800	chr6A	85.210	595	34	14	2261	2828	577830825	577831392	4.920000e-156	562.0
102	TraesCS5D01G138800	chr6A	84.142	618	46	17	2260	2848	125151224	125151818	1.060000e-152	551.0
103	TraesCS5D01G138800	chr6A	88.679	371	19	8	2261	2630	121721986	121721638	1.450000e-116	431.0
104	TraesCS5D01G138800	chr6A	89.256	121	9	1	5746	5862	168121044	168120924	1.630000e-31	148.0
105	TraesCS5D01G138800	chr3B	88.123	1103	70	23	3530	4612	734910288	734909227	0.000000e+00	1254.0
106	TraesCS5D01G138800	chr3B	82.130	1080	88	37	4166	5190	550789849	550790878	0.000000e+00	828.0
107	TraesCS5D01G138800	chr3B	89.315	365	25	4	2850	3209	550789159	550789514	5.170000e-121	446.0
108	TraesCS5D01G138800	chr3B	91.640	311	23	2	5882	6192	734908609	734908302	1.870000e-115	427.0
109	TraesCS5D01G138800	chr3B	92.958	213	9	2	2626	2838	550789000	550789206	9.150000e-79	305.0
110	TraesCS5D01G138800	chr3B	85.463	227	10	4	3322	3525	550789624	550789850	1.590000e-51	215.0
111	TraesCS5D01G138800	chr3B	86.842	190	19	4	3	188	43546492	43546305	2.650000e-49	207.0
112	TraesCS5D01G138800	chr3B	85.638	188	11	9	2261	2447	734910946	734910774	4.470000e-42	183.0
113	TraesCS5D01G138800	chr3B	90.678	118	7	1	5746	5859	47462105	47462222	3.510000e-33	154.0
114	TraesCS5D01G138800	chr3B	88.060	134	7	2	318	442	416801315	416801448	4.540000e-32	150.0
115	TraesCS5D01G138800	chr3B	96.000	50	0	1	3442	3491	734910337	734910290	6.040000e-11	80.5
116	TraesCS5D01G138800	chr3B	92.000	50	2	1	3442	3491	774221667	774221714	1.310000e-07	69.4
117	TraesCS5D01G138800	chr6D	84.829	1081	83	30	4166	5190	430998650	430999705	0.000000e+00	1013.0
118	TraesCS5D01G138800	chr6D	85.417	528	35	14	4217	4721	445172578	445173086	1.810000e-140	510.0
119	TraesCS5D01G138800	chr6D	88.705	363	26	3	2850	3209	430997852	430998202	5.200000e-116	429.0
120	TraesCS5D01G138800	chr6D	86.294	197	25	2	5295	5490	430999747	430999942	5.710000e-51	213.0
121	TraesCS5D01G138800	chr2B	85.991	878	65	24	3757	4612	755333617	755334458	0.000000e+00	887.0
122	TraesCS5D01G138800	chr2B	91.961	311	22	2	5882	6192	755335073	755335380	4.020000e-117	433.0
123	TraesCS5D01G138800	chr2B	83.824	136	12	3	316	442	628912854	628912988	3.560000e-23	121.0
124	TraesCS5D01G138800	chr6B	85.179	614	41	23	2260	2847	153235749	153235160	1.050000e-162	584.0
125	TraesCS5D01G138800	chr6B	90.819	403	13	5	3322	3701	153234795	153234394	1.080000e-142	518.0
126	TraesCS5D01G138800	chr6B	92.857	280	19	1	2850	3129	153235216	153234938	8.770000e-109	405.0
127	TraesCS5D01G138800	chr6B	87.578	161	17	2	37	194	466782825	466782985	4.470000e-42	183.0
128	TraesCS5D01G138800	chr6B	90.984	122	7	1	5742	5859	713062731	713062610	2.100000e-35	161.0
129	TraesCS5D01G138800	chr6B	87.838	74	6	2	3258	3328	153234899	153234826	4.670000e-12	84.2
130	TraesCS5D01G138800	chr4D	89.125	377	18	11	2262	2631	57872275	57872635	1.440000e-121	448.0
131	TraesCS5D01G138800	chr4D	84.559	136	12	2	316	442	449981208	449981343	7.650000e-25	126.0
132	TraesCS5D01G138800	chr7D	91.961	311	22	2	5882	6192	600068721	600069028	4.020000e-117	433.0
133	TraesCS5D01G138800	chr7B	82.817	355	48	9	5365	5717	7013272	7013615	9.150000e-79	305.0
134	TraesCS5D01G138800	chr2D	94.697	132	7	0	5188	5319	428552359	428552490	9.550000e-49	206.0
135	TraesCS5D01G138800	chr2D	90.083	121	6	3	5747	5862	548272135	548272254	1.260000e-32	152.0
136	TraesCS5D01G138800	chr7A	91.837	147	6	5	5181	5327	330863706	330863846	4.440000e-47	200.0
137	TraesCS5D01G138800	chrUn	88.806	134	6	2	318	442	136397331	136397198	9.750000e-34	156.0
138	TraesCS5D01G138800	chr4B	89.744	117	12	0	5743	5859	140590272	140590388	4.540000e-32	150.0
139	TraesCS5D01G138800	chr2A	86.029	136	10	2	316	442	536269645	536269510	3.530000e-28	137.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS5D01G138800	chr5D	221006265	221013524	7259	False	13407.000000	13407	100.000000	1	7260	1	chr5D.!!$F1	7259
1	TraesCS5D01G138800	chr5D	87544644	87545975	1331	True	491.666667	623	89.659667	2260	3666	3	chr5D.!!$R3	1406
2	TraesCS5D01G138800	chr5D	118206783	118208113	1330	True	406.500000	662	90.642000	2260	3666	4	chr5D.!!$R4	1406
3	TraesCS5D01G138800	chr5D	122072271	122073177	906	True	372.000000	422	90.812500	2626	3666	2	chr5D.!!$R5	1040
4	TraesCS5D01G138800	chr5B	243743205	243749987	6782	False	1466.342857	5605	92.704143	207	7000	7	chr5B.!!$F8	6793
5	TraesCS5D01G138800	chr5B	117248872	117250201	1329	False	488.666667	649	89.238333	2260	3666	3	chr5B.!!$F6	1406
6	TraesCS5D01G138800	chr5B	93476074	93476622	548	True	265.933333	401	92.073333	2626	3320	3	chr5B.!!$R1	694
7	TraesCS5D01G138800	chr5A	295316285	295325197	8912	False	1039.560000	3699	94.110200	491	6961	10	chr5A.!!$F3	6470
8	TraesCS5D01G138800	chr4A	554702471	554704077	1606	False	1589.000000	1589	85.087000	3590	5190	1	chr4A.!!$F2	1600
9	TraesCS5D01G138800	chr4A	557657587	557659005	1418	True	1336.000000	1336	84.318000	3778	5190	1	chr4A.!!$R2	1412
10	TraesCS5D01G138800	chr4A	9634406	9637445	3039	False	754.250000	1993	87.740500	2626	5723	4	chr4A.!!$F3	3097
11	TraesCS5D01G138800	chr4A	538718883	538719805	922	True	344.400000	599	87.394000	2260	3328	2	chr4A.!!$R5	1068
12	TraesCS5D01G138800	chr3D	579691380	579693634	2254	False	1137.500000	1964	85.089500	3442	5723	2	chr3D.!!$F1	2281
13	TraesCS5D01G138800	chr3A	607849041	607851685	2644	False	1157.000000	1881	89.241500	3442	6192	2	chr3A.!!$F5	2750
14	TraesCS5D01G138800	chr3A	714791778	714794423	2645	False	1153.000000	1875	89.426500	3442	6192	2	chr3A.!!$F6	2750
15	TraesCS5D01G138800	chr1B	146943337	146944612	1275	True	1583.000000	1583	89.142000	3505	4800	1	chr1B.!!$R1	1295
16	TraesCS5D01G138800	chr1B	116253711	116254991	1280	False	1580.000000	1580	89.015000	3502	4800	1	chr1B.!!$F2	1298
17	TraesCS5D01G138800	chr1B	596179010	596180605	1595	False	896.500000	1347	88.709000	2261	4612	2	chr1B.!!$F4	2351
18	TraesCS5D01G138800	chr1B	143105456	143107541	2085	False	894.500000	1362	89.873500	3442	6192	2	chr1B.!!$F3	2750
19	TraesCS5D01G138800	chr1B	640617508	640618093	585	True	564.000000	564	84.666000	2260	2847	1	chr1B.!!$R2	587
20	TraesCS5D01G138800	chr1A	86039318	86041013	1695	True	833.500000	1373	85.199000	3442	5723	2	chr1A.!!$R1	2281
21	TraesCS5D01G138800	chr1A	556839409	556839914	505	False	303.900000	518	90.004000	3258	3701	2	chr1A.!!$F1	443
22	TraesCS5D01G138800	chr1D	439407005	439409546	2541	False	634.250000	1343	88.041250	2261	6192	4	chr1D.!!$F3	3931
23	TraesCS5D01G138800	chr1D	64339494	64341713	2219	False	591.666667	1303	85.433000	2261	5723	3	chr1D.!!$F2	3462
24	TraesCS5D01G138800	chr6A	137658323	137659376	1053	True	905.000000	905	83.087000	4166	5190	1	chr6A.!!$R1	1024
25	TraesCS5D01G138800	chr6A	121720397	121721986	1589	True	875.000000	1319	88.126000	2261	4612	2	chr6A.!!$R3	2351
26	TraesCS5D01G138800	chr6A	577830825	577831392	567	False	562.000000	562	85.210000	2261	2828	1	chr6A.!!$F2	567
27	TraesCS5D01G138800	chr6A	125151224	125151818	594	False	551.000000	551	84.142000	2260	2848	1	chr6A.!!$F1	588
28	TraesCS5D01G138800	chr3B	734908302	734910946	2644	True	486.125000	1254	90.350250	2261	6192	4	chr3B.!!$R2	3931
29	TraesCS5D01G138800	chr3B	550789000	550790878	1878	False	448.500000	828	87.466500	2626	5190	4	chr3B.!!$F4	2564
30	TraesCS5D01G138800	chr6D	430997852	430999942	2090	False	551.666667	1013	86.609333	2850	5490	3	chr6D.!!$F2	2640
31	TraesCS5D01G138800	chr6D	445172578	445173086	508	False	510.000000	510	85.417000	4217	4721	1	chr6D.!!$F1	504
32	TraesCS5D01G138800	chr2B	755333617	755335380	1763	False	660.000000	887	88.976000	3757	6192	2	chr2B.!!$F2	2435
33	TraesCS5D01G138800	chr6B	153234394	153235749	1355	True	397.800000	584	89.173250	2260	3701	4	chr6B.!!$R2	1441

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
22	23	0.032217	AATCAATCCCGGCCCATTGT	60.032	50.000	15.00	4.57	32.67	2.71	F
23	24	0.032217	ATCAATCCCGGCCCATTGTT	60.032	50.000	15.00	7.47	32.67	2.83	F
155	156	0.035598	TTGAGGGTTTGATTCGCCGA	59.964	50.000	0.00	0.00	0.00	5.54	F
395	400	0.036306	AAAATCGCGGAGTTGGGACT	59.964	50.000	6.13	0.00	39.32	3.85	F
940	964	0.248843	AGAAGAAGAGAGGGCAAGCG	59.751	55.000	0.00	0.00	0.00	4.68	F
1584	1610	1.002900	CAACTTTGCCTACACACACCG	60.003	52.381	0.00	0.00	0.00	4.94	F
2966	3139	3.007398	AGGAAGCGGATGGTATCATTCTC	59.993	47.826	0.00	0.00	32.98	2.87	F
3686	4053	0.617413	AGCTGCTCATTACTGCACCT	59.383	50.000	0.00	0.00	35.20	4.00	F
4055	4578	1.573108	TCCCGCCTTCTCTCTTCATT	58.427	50.000	0.00	0.00	0.00	2.57	F
5784	7044	2.031870	AGCTTGTCCCAAACTTGTTCC	58.968	47.619	0.00	0.00	0.00	3.62	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1657	1683	4.156008	GTCGAGCATAACCTGTCCAAAAAT	59.844	41.667	0.00	0.00	0.00	1.82	R
1857	1883	6.536941	TCGCATACAATTAAATACAGACAGCA	59.463	34.615	0.00	0.00	0.00	4.41	R
2429	2488	8.097038	GTCATATAATGGATTACAGCAAGGAGA	58.903	37.037	0.00	0.00	0.00	3.71	R
2589	2723	2.036733	TGGCACTGTGAAGTAGTACACC	59.963	50.000	12.86	0.00	36.35	4.16	R
2966	3139	3.728385	ATTCCAAGGTTCCCTCTTGAG	57.272	47.619	5.51	0.00	42.94	3.02	R
3238	3421	3.207265	TCCTGTGCAGTGTAAATGTGT	57.793	42.857	0.00	0.00	32.28	3.72	R
4121	4644	4.634004	CCCACATATTTCACAGTTCGCTTA	59.366	41.667	0.00	0.00	0.00	3.09	R
5830	7090	0.602905	CGACCGGAAAAGCTTGTCCT	60.603	55.000	29.16	14.83	0.00	3.85	R
5848	7108	2.951642	TGTTACCGTAATACTCCCTCCG	59.048	50.000	0.00	0.00	0.00	4.63	R
7145	10709	0.034863	GGTGGTGGAGGGCGAATAAA	60.035	55.000	0.00	0.00	0.00	1.40	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
17	18	2.441901	TGCAATCAATCCCGGCCC	60.442	61.111	0.00	0.00	0.00	5.80
18	19	2.441901	GCAATCAATCCCGGCCCA	60.442	61.111	0.00	0.00	0.00	5.36
19	20	1.833934	GCAATCAATCCCGGCCCAT	60.834	57.895	0.00	0.00	0.00	4.00
20	21	1.402107	GCAATCAATCCCGGCCCATT	61.402	55.000	0.00	0.00	0.00	3.16
21	22	0.390124	CAATCAATCCCGGCCCATTG	59.610	55.000	11.09	11.09	0.00	2.82
22	23	0.032217	AATCAATCCCGGCCCATTGT	60.032	50.000	15.00	4.57	32.67	2.71
23	24	0.032217	ATCAATCCCGGCCCATTGTT	60.032	50.000	15.00	7.47	32.67	2.83
24	25	0.252012	TCAATCCCGGCCCATTGTTT	60.252	50.000	15.00	0.00	32.67	2.83
25	26	0.175531	CAATCCCGGCCCATTGTTTC	59.824	55.000	0.00	0.00	0.00	2.78
26	27	0.252012	AATCCCGGCCCATTGTTTCA	60.252	50.000	0.00	0.00	0.00	2.69
27	28	0.252012	ATCCCGGCCCATTGTTTCAA	60.252	50.000	0.00	0.00	0.00	2.69
28	29	0.470080	TCCCGGCCCATTGTTTCAAA	60.470	50.000	0.00	0.00	0.00	2.69
29	30	0.394565	CCCGGCCCATTGTTTCAAAA	59.605	50.000	0.00	0.00	0.00	2.44
30	31	1.202698	CCCGGCCCATTGTTTCAAAAA	60.203	47.619	0.00	0.00	0.00	1.94
50	51	5.692115	AAAATTAAAATCCCGGCCATTCT	57.308	34.783	2.24	0.00	0.00	2.40
51	52	5.692115	AAATTAAAATCCCGGCCATTCTT	57.308	34.783	2.24	0.00	0.00	2.52
52	53	5.692115	AATTAAAATCCCGGCCATTCTTT	57.308	34.783	2.24	0.00	0.00	2.52
53	54	4.464069	TTAAAATCCCGGCCATTCTTTG	57.536	40.909	2.24	0.00	0.00	2.77
54	55	0.536724	AAATCCCGGCCATTCTTTGC	59.463	50.000	2.24	0.00	0.00	3.68
55	56	0.614415	AATCCCGGCCATTCTTTGCA	60.614	50.000	2.24	0.00	0.00	4.08
56	57	0.614415	ATCCCGGCCATTCTTTGCAA	60.614	50.000	2.24	0.00	0.00	4.08
57	58	0.614415	TCCCGGCCATTCTTTGCAAT	60.614	50.000	2.24	0.00	0.00	3.56
58	59	0.179103	CCCGGCCATTCTTTGCAATC	60.179	55.000	2.24	0.00	0.00	2.67
59	60	0.179103	CCGGCCATTCTTTGCAATCC	60.179	55.000	2.24	0.00	0.00	3.01
60	61	0.179103	CGGCCATTCTTTGCAATCCC	60.179	55.000	2.24	0.00	0.00	3.85
61	62	0.179103	GGCCATTCTTTGCAATCCCG	60.179	55.000	0.00	0.00	0.00	5.14
62	63	0.179103	GCCATTCTTTGCAATCCCGG	60.179	55.000	0.00	0.00	0.00	5.73
63	64	1.185315	CCATTCTTTGCAATCCCGGT	58.815	50.000	0.00	0.00	0.00	5.28
64	65	1.550072	CCATTCTTTGCAATCCCGGTT	59.450	47.619	0.00	0.00	0.00	4.44
65	66	2.417243	CCATTCTTTGCAATCCCGGTTC	60.417	50.000	0.00	0.00	0.00	3.62
66	67	0.878416	TTCTTTGCAATCCCGGTTCG	59.122	50.000	0.00	0.00	0.00	3.95
68	69	2.542211	CTTTGCAATCCCGGTTCGGC	62.542	60.000	0.00	0.00	46.86	5.54
69	70	3.851897	TTGCAATCCCGGTTCGGCA	62.852	57.895	0.00	1.86	46.86	5.69
70	71	3.059386	GCAATCCCGGTTCGGCAA	61.059	61.111	0.00	0.00	46.86	4.52
71	72	2.631580	GCAATCCCGGTTCGGCAAA	61.632	57.895	0.00	0.00	46.86	3.68
72	73	1.211709	CAATCCCGGTTCGGCAAAC	59.788	57.895	0.00	0.00	46.86	2.93
73	74	2.329614	AATCCCGGTTCGGCAAACG	61.330	57.895	0.00	1.01	46.86	3.60
74	75	2.734948	AATCCCGGTTCGGCAAACGA	62.735	55.000	0.00	0.00	46.36	3.85
97	98	2.220479	GAGGGTTCGATTTAGACCGG	57.780	55.000	0.00	0.00	0.00	5.28
98	99	0.828677	AGGGTTCGATTTAGACCGGG	59.171	55.000	6.32	0.00	0.00	5.73
99	100	0.826062	GGGTTCGATTTAGACCGGGA	59.174	55.000	6.32	0.00	0.00	5.14
100	101	1.415289	GGGTTCGATTTAGACCGGGAT	59.585	52.381	6.32	0.00	0.00	3.85
101	102	2.158856	GGGTTCGATTTAGACCGGGATT	60.159	50.000	6.32	0.00	0.00	3.01
102	103	2.870411	GGTTCGATTTAGACCGGGATTG	59.130	50.000	6.32	0.00	0.00	2.67
103	104	2.234300	TCGATTTAGACCGGGATTGC	57.766	50.000	6.32	0.00	0.00	3.56
104	105	1.483004	TCGATTTAGACCGGGATTGCA	59.517	47.619	6.32	0.00	0.00	4.08
105	106	2.104111	TCGATTTAGACCGGGATTGCAT	59.896	45.455	6.32	0.00	0.00	3.96
106	107	3.322541	TCGATTTAGACCGGGATTGCATA	59.677	43.478	6.32	0.00	0.00	3.14
107	108	3.679980	CGATTTAGACCGGGATTGCATAG	59.320	47.826	6.32	0.00	0.00	2.23
108	109	4.642429	GATTTAGACCGGGATTGCATAGT	58.358	43.478	6.32	0.00	0.00	2.12
109	110	4.497291	TTTAGACCGGGATTGCATAGTT	57.503	40.909	6.32	0.00	0.00	2.24
110	111	5.617528	TTTAGACCGGGATTGCATAGTTA	57.382	39.130	6.32	0.00	0.00	2.24
111	112	3.753294	AGACCGGGATTGCATAGTTAG	57.247	47.619	6.32	0.00	0.00	2.34
112	113	2.368875	AGACCGGGATTGCATAGTTAGG	59.631	50.000	6.32	0.00	0.00	2.69
113	114	1.420138	ACCGGGATTGCATAGTTAGGG	59.580	52.381	6.32	0.00	0.00	3.53
114	115	1.420138	CCGGGATTGCATAGTTAGGGT	59.580	52.381	0.00	0.00	0.00	4.34
115	116	2.494059	CGGGATTGCATAGTTAGGGTG	58.506	52.381	0.00	0.00	0.00	4.61
116	117	2.230660	GGGATTGCATAGTTAGGGTGC	58.769	52.381	0.00	0.00	39.26	5.01
117	118	2.422803	GGGATTGCATAGTTAGGGTGCA	60.423	50.000	0.00	0.00	46.15	4.57
121	122	2.080693	TGCATAGTTAGGGTGCAAACG	58.919	47.619	0.00	0.00	44.99	3.60
122	123	2.289756	TGCATAGTTAGGGTGCAAACGA	60.290	45.455	0.00	0.00	44.99	3.85
123	124	2.943033	GCATAGTTAGGGTGCAAACGAT	59.057	45.455	0.00	0.00	38.68	3.73
124	125	4.124238	GCATAGTTAGGGTGCAAACGATA	58.876	43.478	0.00	0.00	38.68	2.92
125	126	4.211374	GCATAGTTAGGGTGCAAACGATAG	59.789	45.833	0.00	0.00	38.68	2.08
126	127	3.261981	AGTTAGGGTGCAAACGATAGG	57.738	47.619	0.00	0.00	43.77	2.57
127	128	2.093128	AGTTAGGGTGCAAACGATAGGG	60.093	50.000	0.00	0.00	43.77	3.53
128	129	1.868713	TAGGGTGCAAACGATAGGGA	58.131	50.000	0.00	0.00	43.77	4.20
129	130	1.213296	AGGGTGCAAACGATAGGGAT	58.787	50.000	0.00	0.00	43.77	3.85
130	131	1.564348	AGGGTGCAAACGATAGGGATT	59.436	47.619	0.00	0.00	43.77	3.01
131	132	2.025321	AGGGTGCAAACGATAGGGATTT	60.025	45.455	0.00	0.00	43.77	2.17
132	133	3.201266	AGGGTGCAAACGATAGGGATTTA	59.799	43.478	0.00	0.00	43.77	1.40
133	134	3.564225	GGGTGCAAACGATAGGGATTTAG	59.436	47.826	0.00	0.00	43.77	1.85
134	135	4.448210	GGTGCAAACGATAGGGATTTAGA	58.552	43.478	0.00	0.00	43.77	2.10
135	136	4.272748	GGTGCAAACGATAGGGATTTAGAC	59.727	45.833	0.00	0.00	43.77	2.59
136	137	5.116882	GTGCAAACGATAGGGATTTAGACT	58.883	41.667	0.00	0.00	43.77	3.24
137	138	5.585047	GTGCAAACGATAGGGATTTAGACTT	59.415	40.000	0.00	0.00	43.77	3.01
138	139	5.584649	TGCAAACGATAGGGATTTAGACTTG	59.415	40.000	0.00	0.00	43.77	3.16
139	140	5.815740	GCAAACGATAGGGATTTAGACTTGA	59.184	40.000	0.00	0.00	43.77	3.02
140	141	6.018669	GCAAACGATAGGGATTTAGACTTGAG	60.019	42.308	0.00	0.00	43.77	3.02
141	142	5.793030	ACGATAGGGATTTAGACTTGAGG	57.207	43.478	0.00	0.00	43.77	3.86
142	143	4.589374	ACGATAGGGATTTAGACTTGAGGG	59.411	45.833	0.00	0.00	43.77	4.30
143	144	4.589374	CGATAGGGATTTAGACTTGAGGGT	59.411	45.833	0.00	0.00	0.00	4.34
144	145	5.070580	CGATAGGGATTTAGACTTGAGGGTT	59.929	44.000	0.00	0.00	0.00	4.11
145	146	6.408206	CGATAGGGATTTAGACTTGAGGGTTT	60.408	42.308	0.00	0.00	0.00	3.27
146	147	4.923415	AGGGATTTAGACTTGAGGGTTTG	58.077	43.478	0.00	0.00	0.00	2.93
147	148	4.601857	AGGGATTTAGACTTGAGGGTTTGA	59.398	41.667	0.00	0.00	0.00	2.69
148	149	5.254032	AGGGATTTAGACTTGAGGGTTTGAT	59.746	40.000	0.00	0.00	0.00	2.57
149	150	5.952347	GGGATTTAGACTTGAGGGTTTGATT	59.048	40.000	0.00	0.00	0.00	2.57
150	151	6.095580	GGGATTTAGACTTGAGGGTTTGATTC	59.904	42.308	0.00	0.00	0.00	2.52
151	152	6.183360	GGATTTAGACTTGAGGGTTTGATTCG	60.183	42.308	0.00	0.00	0.00	3.34
152	153	2.427506	AGACTTGAGGGTTTGATTCGC	58.572	47.619	0.00	0.00	0.00	4.70
153	154	1.468914	GACTTGAGGGTTTGATTCGCC	59.531	52.381	0.00	0.00	0.00	5.54
154	155	0.447801	CTTGAGGGTTTGATTCGCCG	59.552	55.000	0.00	0.00	0.00	6.46
155	156	0.035598	TTGAGGGTTTGATTCGCCGA	59.964	50.000	0.00	0.00	0.00	5.54
156	157	0.035598	TGAGGGTTTGATTCGCCGAA	59.964	50.000	0.33	0.33	0.00	4.30
157	158	0.446616	GAGGGTTTGATTCGCCGAAC	59.553	55.000	0.00	0.00	0.00	3.95
158	159	0.958876	AGGGTTTGATTCGCCGAACC	60.959	55.000	0.00	0.00	45.63	3.62
159	160	0.958876	GGGTTTGATTCGCCGAACCT	60.959	55.000	0.00	0.00	45.64	3.50
160	161	0.446616	GGTTTGATTCGCCGAACCTC	59.553	55.000	0.00	0.00	43.89	3.85
161	162	1.439679	GTTTGATTCGCCGAACCTCT	58.560	50.000	0.00	0.00	0.00	3.69
162	163	1.128692	GTTTGATTCGCCGAACCTCTG	59.871	52.381	0.00	0.00	0.00	3.35
163	164	0.606096	TTGATTCGCCGAACCTCTGA	59.394	50.000	0.00	0.00	0.00	3.27
164	165	0.173481	TGATTCGCCGAACCTCTGAG	59.827	55.000	0.00	0.00	0.00	3.35
165	166	0.173708	GATTCGCCGAACCTCTGAGT	59.826	55.000	0.00	0.00	0.00	3.41
166	167	0.608640	ATTCGCCGAACCTCTGAGTT	59.391	50.000	0.00	0.00	0.00	3.01
167	168	0.038526	TTCGCCGAACCTCTGAGTTC	60.039	55.000	0.00	6.87	42.25	3.01
174	175	3.336138	GAACCTCTGAGTTCGGGATTT	57.664	47.619	3.66	0.00	37.04	2.17
175	176	4.467198	GAACCTCTGAGTTCGGGATTTA	57.533	45.455	3.66	0.00	37.04	1.40
176	177	4.828829	GAACCTCTGAGTTCGGGATTTAA	58.171	43.478	3.66	0.00	37.04	1.52
177	178	4.903045	ACCTCTGAGTTCGGGATTTAAA	57.097	40.909	3.66	0.00	0.00	1.52
178	179	5.237236	ACCTCTGAGTTCGGGATTTAAAA	57.763	39.130	3.66	0.00	0.00	1.52
179	180	5.816682	ACCTCTGAGTTCGGGATTTAAAAT	58.183	37.500	3.66	0.00	0.00	1.82
180	181	5.648092	ACCTCTGAGTTCGGGATTTAAAATG	59.352	40.000	3.66	0.00	0.00	2.32
181	182	5.066505	CCTCTGAGTTCGGGATTTAAAATGG	59.933	44.000	3.66	0.00	0.00	3.16
182	183	5.811190	TCTGAGTTCGGGATTTAAAATGGA	58.189	37.500	0.00	0.00	0.00	3.41
183	184	6.423182	TCTGAGTTCGGGATTTAAAATGGAT	58.577	36.000	0.00	0.00	0.00	3.41
184	185	6.889722	TCTGAGTTCGGGATTTAAAATGGATT	59.110	34.615	0.00	0.00	0.00	3.01
185	186	7.396055	TCTGAGTTCGGGATTTAAAATGGATTT	59.604	33.333	0.00	0.00	34.92	2.17
186	187	7.902087	TGAGTTCGGGATTTAAAATGGATTTT	58.098	30.769	3.02	3.02	42.21	1.82
187	188	8.371699	TGAGTTCGGGATTTAAAATGGATTTTT	58.628	29.630	2.79	0.00	40.24	1.94
215	216	7.009440	CCATGCATACGTAAAATTATGACGAG	58.991	38.462	0.00	4.78	39.81	4.18
222	223	7.045725	ACGTAAAATTATGACGAGACAACTG	57.954	36.000	12.12	0.00	39.81	3.16
225	226	5.536554	AAATTATGACGAGACAACTGCAG	57.463	39.130	13.48	13.48	0.00	4.41
230	231	2.556622	TGACGAGACAACTGCAGTGATA	59.443	45.455	22.49	0.00	0.00	2.15
276	281	5.243730	GGGAAGACAAATTTGTGATCCTGAA	59.756	40.000	31.41	0.00	42.43	3.02
313	318	7.477144	CGCAAGAAATGGTTACACTATATGA	57.523	36.000	0.00	0.00	43.02	2.15
314	319	8.087982	CGCAAGAAATGGTTACACTATATGAT	57.912	34.615	0.00	0.00	43.02	2.45
315	320	8.011673	CGCAAGAAATGGTTACACTATATGATG	58.988	37.037	0.00	0.00	43.02	3.07
316	321	8.292448	GCAAGAAATGGTTACACTATATGATGG	58.708	37.037	0.00	0.00	0.00	3.51
317	322	7.986085	AGAAATGGTTACACTATATGATGGC	57.014	36.000	0.00	0.00	0.00	4.40
318	323	6.942576	AGAAATGGTTACACTATATGATGGCC	59.057	38.462	0.00	0.00	0.00	5.36
319	324	6.454223	AATGGTTACACTATATGATGGCCT	57.546	37.500	3.32	0.00	0.00	5.19
320	325	5.227569	TGGTTACACTATATGATGGCCTG	57.772	43.478	3.32	0.00	0.00	4.85
321	326	4.658435	TGGTTACACTATATGATGGCCTGT	59.342	41.667	3.32	0.00	0.00	4.00
322	327	5.131977	TGGTTACACTATATGATGGCCTGTT	59.868	40.000	3.32	0.00	0.00	3.16
323	328	5.701290	GGTTACACTATATGATGGCCTGTTC	59.299	44.000	3.32	0.00	0.00	3.18
324	329	3.995199	ACACTATATGATGGCCTGTTCG	58.005	45.455	3.32	0.00	0.00	3.95
325	330	3.244215	ACACTATATGATGGCCTGTTCGG	60.244	47.826	3.32	0.00	0.00	4.30
326	331	3.006859	CACTATATGATGGCCTGTTCGGA	59.993	47.826	3.32	0.00	33.16	4.55
327	332	3.840666	ACTATATGATGGCCTGTTCGGAT	59.159	43.478	3.32	0.00	33.16	4.18
328	333	3.795688	ATATGATGGCCTGTTCGGATT	57.204	42.857	3.32	0.00	33.16	3.01
329	334	1.972872	ATGATGGCCTGTTCGGATTC	58.027	50.000	3.32	0.00	33.16	2.52
330	335	0.107214	TGATGGCCTGTTCGGATTCC	60.107	55.000	3.32	0.00	33.16	3.01
331	336	0.819666	GATGGCCTGTTCGGATTCCC	60.820	60.000	3.32	0.00	33.16	3.97
332	337	1.281925	ATGGCCTGTTCGGATTCCCT	61.282	55.000	3.32	0.00	33.16	4.20
333	338	1.153147	GGCCTGTTCGGATTCCCTC	60.153	63.158	0.00	0.00	33.16	4.30
334	339	1.153147	GCCTGTTCGGATTCCCTCC	60.153	63.158	0.00	0.00	41.07	4.30
335	340	1.527370	CCTGTTCGGATTCCCTCCC	59.473	63.158	0.00	0.00	41.49	4.30
336	341	1.527370	CTGTTCGGATTCCCTCCCC	59.473	63.158	0.00	0.00	41.49	4.81
337	342	0.983378	CTGTTCGGATTCCCTCCCCT	60.983	60.000	0.00	0.00	41.49	4.79
338	343	0.981277	TGTTCGGATTCCCTCCCCTC	60.981	60.000	0.00	0.00	41.49	4.30
339	344	1.384082	TTCGGATTCCCTCCCCTCC	60.384	63.158	0.00	0.00	41.49	4.30
340	345	2.040884	CGGATTCCCTCCCCTCCA	60.041	66.667	0.00	0.00	41.49	3.86
341	346	2.444256	CGGATTCCCTCCCCTCCAC	61.444	68.421	0.00	0.00	41.49	4.02
342	347	1.307866	GGATTCCCTCCCCTCCACA	60.308	63.158	0.00	0.00	38.19	4.17
343	348	0.919289	GGATTCCCTCCCCTCCACAA	60.919	60.000	0.00	0.00	38.19	3.33
344	349	0.256177	GATTCCCTCCCCTCCACAAC	59.744	60.000	0.00	0.00	0.00	3.32
345	350	0.178831	ATTCCCTCCCCTCCACAACT	60.179	55.000	0.00	0.00	0.00	3.16
346	351	0.840722	TTCCCTCCCCTCCACAACTC	60.841	60.000	0.00	0.00	0.00	3.01
347	352	2.301738	CCCTCCCCTCCACAACTCC	61.302	68.421	0.00	0.00	0.00	3.85
348	353	2.660064	CCTCCCCTCCACAACTCCG	61.660	68.421	0.00	0.00	0.00	4.63
349	354	3.316573	CTCCCCTCCACAACTCCGC	62.317	68.421	0.00	0.00	0.00	5.54
350	355	3.322466	CCCCTCCACAACTCCGCT	61.322	66.667	0.00	0.00	0.00	5.52
351	356	2.266055	CCCTCCACAACTCCGCTC	59.734	66.667	0.00	0.00	0.00	5.03
352	357	2.266055	CCTCCACAACTCCGCTCC	59.734	66.667	0.00	0.00	0.00	4.70
353	358	2.266055	CTCCACAACTCCGCTCCC	59.734	66.667	0.00	0.00	0.00	4.30
354	359	3.649277	CTCCACAACTCCGCTCCCG	62.649	68.421	0.00	0.00	0.00	5.14
366	371	2.837291	CTCCCGGAGCTGGAGGAG	60.837	72.222	0.73	8.97	44.73	3.69
374	379	2.659610	GCTGGAGGAGCGACAGTT	59.340	61.111	0.00	0.00	38.15	3.16
375	380	1.446966	GCTGGAGGAGCGACAGTTC	60.447	63.158	0.00	0.00	38.15	3.01
376	381	1.967535	CTGGAGGAGCGACAGTTCA	59.032	57.895	0.00	0.00	0.00	3.18
377	382	0.318441	CTGGAGGAGCGACAGTTCAA	59.682	55.000	0.00	0.00	0.00	2.69
378	383	0.756294	TGGAGGAGCGACAGTTCAAA	59.244	50.000	0.00	0.00	0.00	2.69
379	384	1.140052	TGGAGGAGCGACAGTTCAAAA	59.860	47.619	0.00	0.00	0.00	2.44
380	385	2.224523	TGGAGGAGCGACAGTTCAAAAT	60.225	45.455	0.00	0.00	0.00	1.82
381	386	2.416893	GGAGGAGCGACAGTTCAAAATC	59.583	50.000	0.00	0.00	0.00	2.17
382	387	2.069273	AGGAGCGACAGTTCAAAATCG	58.931	47.619	0.00	0.00	37.63	3.34
385	390	3.274196	CGACAGTTCAAAATCGCGG	57.726	52.632	6.13	0.00	0.00	6.46
386	391	0.787787	CGACAGTTCAAAATCGCGGA	59.212	50.000	6.13	0.00	0.00	5.54
387	392	1.201812	CGACAGTTCAAAATCGCGGAG	60.202	52.381	6.13	0.00	0.00	4.63
388	393	1.798813	GACAGTTCAAAATCGCGGAGT	59.201	47.619	6.13	0.00	0.00	3.85
389	394	2.218603	ACAGTTCAAAATCGCGGAGTT	58.781	42.857	6.13	0.00	0.00	3.01
390	395	2.032030	ACAGTTCAAAATCGCGGAGTTG	60.032	45.455	6.13	8.24	0.00	3.16
391	396	1.535462	AGTTCAAAATCGCGGAGTTGG	59.465	47.619	6.13	0.00	0.00	3.77
392	397	0.878416	TTCAAAATCGCGGAGTTGGG	59.122	50.000	6.13	0.00	0.00	4.12
393	398	0.035598	TCAAAATCGCGGAGTTGGGA	59.964	50.000	6.13	0.00	35.12	4.37
394	399	0.168128	CAAAATCGCGGAGTTGGGAC	59.832	55.000	6.13	0.00	33.30	4.46
395	400	0.036306	AAAATCGCGGAGTTGGGACT	59.964	50.000	6.13	0.00	39.32	3.85
406	411	4.762289	GAGTTGGGACTCCACATATTCT	57.238	45.455	0.00	0.00	45.34	2.40
407	412	4.698575	GAGTTGGGACTCCACATATTCTC	58.301	47.826	0.00	0.00	45.34	2.87
408	413	4.104086	AGTTGGGACTCCACATATTCTCA	58.896	43.478	0.00	0.00	43.94	3.27
409	414	4.163078	AGTTGGGACTCCACATATTCTCAG	59.837	45.833	0.00	0.00	43.94	3.35
410	415	3.994317	TGGGACTCCACATATTCTCAGA	58.006	45.455	0.00	0.00	38.32	3.27
411	416	4.560739	TGGGACTCCACATATTCTCAGAT	58.439	43.478	0.00	0.00	38.32	2.90
412	417	4.971282	TGGGACTCCACATATTCTCAGATT	59.029	41.667	0.00	0.00	38.32	2.40
413	418	5.429762	TGGGACTCCACATATTCTCAGATTT	59.570	40.000	0.00	0.00	38.32	2.17
414	419	5.994668	GGGACTCCACATATTCTCAGATTTC	59.005	44.000	0.00	0.00	0.00	2.17
415	420	6.408548	GGGACTCCACATATTCTCAGATTTCA	60.409	42.308	0.00	0.00	0.00	2.69
416	421	6.481644	GGACTCCACATATTCTCAGATTTCAC	59.518	42.308	0.00	0.00	0.00	3.18
417	422	6.045318	ACTCCACATATTCTCAGATTTCACG	58.955	40.000	0.00	0.00	0.00	4.35
418	423	5.359756	TCCACATATTCTCAGATTTCACGG	58.640	41.667	0.00	0.00	0.00	4.94
419	424	5.128663	TCCACATATTCTCAGATTTCACGGA	59.871	40.000	0.00	0.00	0.00	4.69
420	425	5.464722	CCACATATTCTCAGATTTCACGGAG	59.535	44.000	0.00	0.00	34.41	4.63
422	427	7.203218	CACATATTCTCAGATTTCACGGAGTA	58.797	38.462	0.00	0.00	41.61	2.59
423	428	7.380870	CACATATTCTCAGATTTCACGGAGTAG	59.619	40.741	0.00	0.00	41.61	2.57
424	429	4.720649	TTCTCAGATTTCACGGAGTAGG	57.279	45.455	0.00	0.00	41.61	3.18
425	430	3.964411	TCTCAGATTTCACGGAGTAGGA	58.036	45.455	0.00	0.00	41.61	2.94
426	431	3.948473	TCTCAGATTTCACGGAGTAGGAG	59.052	47.826	0.00	0.00	41.61	3.69
427	432	3.024547	TCAGATTTCACGGAGTAGGAGG	58.975	50.000	0.00	0.00	41.61	4.30
428	433	2.761208	CAGATTTCACGGAGTAGGAGGT	59.239	50.000	0.00	0.00	41.61	3.85
429	434	3.195825	CAGATTTCACGGAGTAGGAGGTT	59.804	47.826	0.00	0.00	41.61	3.50
430	435	4.401519	CAGATTTCACGGAGTAGGAGGTTA	59.598	45.833	0.00	0.00	41.61	2.85
431	436	4.401837	AGATTTCACGGAGTAGGAGGTTAC	59.598	45.833	0.00	0.00	41.61	2.50
432	437	2.134789	TCACGGAGTAGGAGGTTACC	57.865	55.000	0.00	0.00	41.61	2.85
433	438	0.737219	CACGGAGTAGGAGGTTACCG	59.263	60.000	0.00	0.00	41.61	4.02
434	439	0.620556	ACGGAGTAGGAGGTTACCGA	59.379	55.000	0.00	0.00	41.94	4.69
435	440	1.004745	ACGGAGTAGGAGGTTACCGAA	59.995	52.381	0.00	0.00	41.94	4.30
436	441	1.403323	CGGAGTAGGAGGTTACCGAAC	59.597	57.143	0.00	0.00	42.40	3.95
437	442	2.450476	GGAGTAGGAGGTTACCGAACA	58.550	52.381	0.00	0.00	37.29	3.18
438	443	2.426381	GGAGTAGGAGGTTACCGAACAG	59.574	54.545	0.00	0.00	37.29	3.16
439	444	1.823610	AGTAGGAGGTTACCGAACAGC	59.176	52.381	0.00	0.00	37.29	4.40
440	445	1.134877	GTAGGAGGTTACCGAACAGCC	60.135	57.143	0.00	0.00	37.29	4.85
441	446	1.078637	GGAGGTTACCGAACAGCCC	60.079	63.158	0.00	0.00	37.29	5.19
442	447	1.551019	GGAGGTTACCGAACAGCCCT	61.551	60.000	0.00	0.00	37.29	5.19
443	448	0.323957	GAGGTTACCGAACAGCCCTT	59.676	55.000	0.00	0.00	37.29	3.95
444	449	0.036306	AGGTTACCGAACAGCCCTTG	59.964	55.000	0.00	0.00	37.29	3.61
445	450	0.250597	GGTTACCGAACAGCCCTTGT	60.251	55.000	0.00	0.00	43.45	3.16
446	451	0.872388	GTTACCGAACAGCCCTTGTG	59.128	55.000	0.00	0.00	40.74	3.33
447	452	0.470766	TTACCGAACAGCCCTTGTGT	59.529	50.000	0.00	0.00	40.74	3.72
448	453	1.340088	TACCGAACAGCCCTTGTGTA	58.660	50.000	0.00	0.00	40.74	2.90
449	454	0.250166	ACCGAACAGCCCTTGTGTAC	60.250	55.000	0.00	0.00	40.74	2.90
450	455	1.289109	CCGAACAGCCCTTGTGTACG	61.289	60.000	0.00	0.00	40.74	3.67
451	456	0.319211	CGAACAGCCCTTGTGTACGA	60.319	55.000	0.00	0.00	40.74	3.43
452	457	1.671850	CGAACAGCCCTTGTGTACGAT	60.672	52.381	0.00	0.00	40.74	3.73
453	458	2.000447	GAACAGCCCTTGTGTACGATC	59.000	52.381	0.00	0.00	40.74	3.69
454	459	0.973632	ACAGCCCTTGTGTACGATCA	59.026	50.000	0.00	0.00	38.99	2.92
455	460	1.555075	ACAGCCCTTGTGTACGATCAT	59.445	47.619	0.00	0.00	38.99	2.45
456	461	2.764010	ACAGCCCTTGTGTACGATCATA	59.236	45.455	0.00	0.00	38.99	2.15
457	462	3.196901	ACAGCCCTTGTGTACGATCATAA	59.803	43.478	0.00	0.00	38.99	1.90
458	463	4.188462	CAGCCCTTGTGTACGATCATAAA	58.812	43.478	0.00	0.00	0.00	1.40
459	464	4.034048	CAGCCCTTGTGTACGATCATAAAC	59.966	45.833	0.00	0.00	0.00	2.01
460	465	3.936453	GCCCTTGTGTACGATCATAAACA	59.064	43.478	0.00	0.00	0.00	2.83
461	466	4.574828	GCCCTTGTGTACGATCATAAACAT	59.425	41.667	0.00	0.00	0.00	2.71
462	467	5.065988	GCCCTTGTGTACGATCATAAACATT	59.934	40.000	0.00	0.00	0.00	2.71
463	468	6.486248	CCCTTGTGTACGATCATAAACATTG	58.514	40.000	0.00	0.00	0.00	2.82
464	469	6.093495	CCCTTGTGTACGATCATAAACATTGT	59.907	38.462	0.00	0.00	0.00	2.71
465	470	7.361713	CCCTTGTGTACGATCATAAACATTGTT	60.362	37.037	0.00	0.00	0.00	2.83
466	471	7.692291	CCTTGTGTACGATCATAAACATTGTTC	59.308	37.037	1.83	0.00	0.00	3.18
467	472	7.899178	TGTGTACGATCATAAACATTGTTCT	57.101	32.000	1.83	0.00	0.00	3.01
468	473	7.959733	TGTGTACGATCATAAACATTGTTCTC	58.040	34.615	1.83	0.00	0.00	2.87
469	474	7.064134	TGTGTACGATCATAAACATTGTTCTCC	59.936	37.037	1.83	0.00	0.00	3.71
470	475	7.064134	GTGTACGATCATAAACATTGTTCTCCA	59.936	37.037	1.83	0.00	0.00	3.86
471	476	7.604545	TGTACGATCATAAACATTGTTCTCCAA	59.395	33.333	1.83	0.00	37.49	3.53
472	477	7.076842	ACGATCATAAACATTGTTCTCCAAG	57.923	36.000	1.83	0.00	36.25	3.61
473	478	6.878923	ACGATCATAAACATTGTTCTCCAAGA	59.121	34.615	1.83	0.00	36.25	3.02
474	479	7.390440	ACGATCATAAACATTGTTCTCCAAGAA	59.610	33.333	1.83	0.00	36.25	2.52
475	480	8.236586	CGATCATAAACATTGTTCTCCAAGAAA	58.763	33.333	1.83	0.00	35.75	2.52
476	481	9.565213	GATCATAAACATTGTTCTCCAAGAAAG	57.435	33.333	1.83	0.00	35.75	2.62
477	482	8.690203	TCATAAACATTGTTCTCCAAGAAAGA	57.310	30.769	1.83	0.00	35.75	2.52
478	483	9.130661	TCATAAACATTGTTCTCCAAGAAAGAA	57.869	29.630	1.83	0.00	35.75	2.52
479	484	9.748708	CATAAACATTGTTCTCCAAGAAAGAAA	57.251	29.630	1.83	0.00	35.75	2.52
480	485	9.750125	ATAAACATTGTTCTCCAAGAAAGAAAC	57.250	29.630	1.83	0.00	35.75	2.78
481	486	6.773976	ACATTGTTCTCCAAGAAAGAAACA	57.226	33.333	0.00	0.00	35.75	2.83
482	487	7.169158	ACATTGTTCTCCAAGAAAGAAACAA	57.831	32.000	0.00	0.00	35.75	2.83
483	488	7.260603	ACATTGTTCTCCAAGAAAGAAACAAG	58.739	34.615	0.00	0.00	35.75	3.16
484	489	5.835113	TGTTCTCCAAGAAAGAAACAAGG	57.165	39.130	0.00	0.00	35.75	3.61
485	490	5.505780	TGTTCTCCAAGAAAGAAACAAGGA	58.494	37.500	0.00	0.00	35.75	3.36
486	491	5.590259	TGTTCTCCAAGAAAGAAACAAGGAG	59.410	40.000	0.00	0.00	41.88	3.69
487	492	5.630415	TCTCCAAGAAAGAAACAAGGAGA	57.370	39.130	0.00	0.00	45.63	3.71
488	493	6.001449	TCTCCAAGAAAGAAACAAGGAGAA	57.999	37.500	5.84	0.00	45.06	2.87
489	494	5.823045	TCTCCAAGAAAGAAACAAGGAGAAC	59.177	40.000	5.84	0.00	45.06	3.01
490	495	5.505780	TCCAAGAAAGAAACAAGGAGAACA	58.494	37.500	0.00	0.00	0.00	3.18
491	496	5.949354	TCCAAGAAAGAAACAAGGAGAACAA	59.051	36.000	0.00	0.00	0.00	2.83
492	497	6.036470	CCAAGAAAGAAACAAGGAGAACAAC	58.964	40.000	0.00	0.00	0.00	3.32
524	529	9.314321	CTATCTACGGTCATAAACATTGTTCTT	57.686	33.333	1.83	0.00	0.00	2.52
525	530	7.972832	TCTACGGTCATAAACATTGTTCTTT	57.027	32.000	1.83	0.00	0.00	2.52
526	531	8.385898	TCTACGGTCATAAACATTGTTCTTTT	57.614	30.769	1.83	0.00	0.00	2.27
527	532	8.842280	TCTACGGTCATAAACATTGTTCTTTTT	58.158	29.630	1.83	0.00	0.00	1.94
560	565	7.814587	GGGAATAAACATTGTTCTCCAAGAAAG	59.185	37.037	19.16	0.00	35.75	2.62
880	885	2.005960	GCATCGCACTAGGTCTCGGT	62.006	60.000	0.00	0.00	0.00	4.69
890	895	1.770294	AGGTCTCGGTCATTCCTCTC	58.230	55.000	0.00	0.00	0.00	3.20
894	899	2.616842	GTCTCGGTCATTCCTCTCTCTC	59.383	54.545	0.00	0.00	0.00	3.20
895	900	2.507886	TCTCGGTCATTCCTCTCTCTCT	59.492	50.000	0.00	0.00	0.00	3.10
936	960	3.515562	AGAAGAAGAAGAAGAGAGGGCA	58.484	45.455	0.00	0.00	0.00	5.36
937	961	3.906846	AGAAGAAGAAGAAGAGAGGGCAA	59.093	43.478	0.00	0.00	0.00	4.52
938	962	3.979101	AGAAGAAGAAGAGAGGGCAAG	57.021	47.619	0.00	0.00	0.00	4.01
939	963	2.027285	AGAAGAAGAAGAGAGGGCAAGC	60.027	50.000	0.00	0.00	0.00	4.01
940	964	0.248843	AGAAGAAGAGAGGGCAAGCG	59.751	55.000	0.00	0.00	0.00	4.68
941	965	1.365368	GAAGAAGAGAGGGCAAGCGC	61.365	60.000	0.00	0.00	37.44	5.92
1082	1106	1.262640	AAGCCGGTAACCGTCCATCT	61.263	55.000	1.90	0.00	46.80	2.90
1584	1610	1.002900	CAACTTTGCCTACACACACCG	60.003	52.381	0.00	0.00	0.00	4.94
1657	1683	3.035363	TGGAGCTTGACGATTGGGTATA	58.965	45.455	0.00	0.00	0.00	1.47
1857	1883	5.781210	TCTATCATCTCGCTGAATCTTGT	57.219	39.130	0.00	0.00	0.00	3.16
2469	2594	7.337689	TCCATTATATGACTTTATGAGCATGCC	59.662	37.037	15.66	6.65	0.00	4.40
2589	2723	9.760077	AAGTAACTCATTACGTGGATATTTAGG	57.240	33.333	0.00	0.00	44.69	2.69
2615	2749	3.931578	ACTACTTCACAGTGCCATCTTC	58.068	45.455	0.00	0.00	34.06	2.87
2665	2827	5.921004	TTGTTTGCATTTCATACTTTGGC	57.079	34.783	0.00	0.00	0.00	4.52
2966	3139	3.007398	AGGAAGCGGATGGTATCATTCTC	59.993	47.826	0.00	0.00	32.98	2.87
3236	3419	4.646492	GCCACAAAGGATCAGACCATTAAT	59.354	41.667	0.00	0.00	41.22	1.40
3237	3420	5.127682	GCCACAAAGGATCAGACCATTAATT	59.872	40.000	0.00	0.00	41.22	1.40
3238	3421	6.321181	GCCACAAAGGATCAGACCATTAATTA	59.679	38.462	0.00	0.00	41.22	1.40
3239	3422	7.682021	GCCACAAAGGATCAGACCATTAATTAC	60.682	40.741	0.00	0.00	41.22	1.89
3240	3423	7.339212	CCACAAAGGATCAGACCATTAATTACA	59.661	37.037	0.00	0.00	41.22	2.41
3241	3424	8.184192	CACAAAGGATCAGACCATTAATTACAC	58.816	37.037	0.00	0.00	0.00	2.90
3242	3425	7.888021	ACAAAGGATCAGACCATTAATTACACA	59.112	33.333	0.00	0.00	0.00	3.72
3243	3426	8.906867	CAAAGGATCAGACCATTAATTACACAT	58.093	33.333	0.00	0.00	0.00	3.21
3314	3497	3.185391	CAGCTCCACTCTCGTTCTTTTTC	59.815	47.826	0.00	0.00	0.00	2.29
3686	4053	0.617413	AGCTGCTCATTACTGCACCT	59.383	50.000	0.00	0.00	35.20	4.00
4055	4578	1.573108	TCCCGCCTTCTCTCTTCATT	58.427	50.000	0.00	0.00	0.00	2.57
4401	4935	2.087646	GGGCTGCAAGGTAGAAAGAAG	58.912	52.381	0.50	0.00	0.00	2.85
4597	5146	6.303839	TGAGGTATGTTTACAGCCTTTTTCT	58.696	36.000	9.26	0.00	36.01	2.52
4605	5154	7.832769	TGTTTACAGCCTTTTTCTTTGTAACT	58.167	30.769	0.00	0.00	34.88	2.24
4766	5893	6.109359	GTGCAACTCAATACAGAGGAACTAT	58.891	40.000	0.00	0.00	41.55	2.12
4767	5894	7.093509	TGTGCAACTCAATACAGAGGAACTATA	60.094	37.037	0.00	0.00	39.97	1.31
5203	6366	8.930846	ATTAACATGTATACTACTACCTCCGT	57.069	34.615	0.00	0.00	0.00	4.69
5204	6367	6.874288	AACATGTATACTACTACCTCCGTC	57.126	41.667	0.00	0.00	0.00	4.79
5205	6368	5.312079	ACATGTATACTACTACCTCCGTCC	58.688	45.833	0.00	0.00	0.00	4.79
5206	6369	3.995199	TGTATACTACTACCTCCGTCCG	58.005	50.000	4.17	0.00	0.00	4.79
5207	6370	3.641436	TGTATACTACTACCTCCGTCCGA	59.359	47.826	4.17	0.00	0.00	4.55
5208	6371	3.845781	ATACTACTACCTCCGTCCGAA	57.154	47.619	0.00	0.00	0.00	4.30
5209	6372	2.496899	ACTACTACCTCCGTCCGAAA	57.503	50.000	0.00	0.00	0.00	3.46
5210	6373	2.795329	ACTACTACCTCCGTCCGAAAA	58.205	47.619	0.00	0.00	0.00	2.29
5211	6374	3.359950	ACTACTACCTCCGTCCGAAAAT	58.640	45.455	0.00	0.00	0.00	1.82
5212	6375	4.526970	ACTACTACCTCCGTCCGAAAATA	58.473	43.478	0.00	0.00	0.00	1.40
5213	6376	3.790152	ACTACCTCCGTCCGAAAATAC	57.210	47.619	0.00	0.00	0.00	1.89
5214	6377	3.359950	ACTACCTCCGTCCGAAAATACT	58.640	45.455	0.00	0.00	0.00	2.12
5215	6378	3.766051	ACTACCTCCGTCCGAAAATACTT	59.234	43.478	0.00	0.00	0.00	2.24
5216	6379	2.968675	ACCTCCGTCCGAAAATACTTG	58.031	47.619	0.00	0.00	0.00	3.16
5217	6380	2.301009	ACCTCCGTCCGAAAATACTTGT	59.699	45.455	0.00	0.00	0.00	3.16
5218	6381	2.928116	CCTCCGTCCGAAAATACTTGTC	59.072	50.000	0.00	0.00	0.00	3.18
5219	6382	3.581755	CTCCGTCCGAAAATACTTGTCA	58.418	45.455	0.00	0.00	0.00	3.58
5220	6383	4.181578	CTCCGTCCGAAAATACTTGTCAT	58.818	43.478	0.00	0.00	0.00	3.06
5221	6384	4.178540	TCCGTCCGAAAATACTTGTCATC	58.821	43.478	0.00	0.00	0.00	2.92
5222	6385	3.930229	CCGTCCGAAAATACTTGTCATCA	59.070	43.478	0.00	0.00	0.00	3.07
5223	6386	4.390603	CCGTCCGAAAATACTTGTCATCAA	59.609	41.667	0.00	0.00	0.00	2.57
5224	6387	5.106869	CCGTCCGAAAATACTTGTCATCAAA	60.107	40.000	0.00	0.00	32.87	2.69
5225	6388	6.367421	CGTCCGAAAATACTTGTCATCAAAA	58.633	36.000	0.00	0.00	32.87	2.44
5226	6389	7.021196	CGTCCGAAAATACTTGTCATCAAAAT	58.979	34.615	0.00	0.00	32.87	1.82
5227	6390	7.007367	CGTCCGAAAATACTTGTCATCAAAATG	59.993	37.037	0.00	0.00	32.87	2.32
5228	6391	8.020819	GTCCGAAAATACTTGTCATCAAAATGA	58.979	33.333	0.00	0.00	39.63	2.57
5229	6392	8.572185	TCCGAAAATACTTGTCATCAAAATGAA	58.428	29.630	0.00	0.00	43.42	2.57
5230	6393	8.638565	CCGAAAATACTTGTCATCAAAATGAAC	58.361	33.333	0.00	0.00	43.42	3.18
5231	6394	9.179552	CGAAAATACTTGTCATCAAAATGAACA	57.820	29.630	0.00	0.00	43.42	3.18
5237	6400	8.200364	ACTTGTCATCAAAATGAACAAAAAGG	57.800	30.769	0.87	0.00	43.42	3.11
5238	6401	7.280652	ACTTGTCATCAAAATGAACAAAAAGGG	59.719	33.333	0.87	0.00	43.42	3.95
5239	6402	6.054295	TGTCATCAAAATGAACAAAAAGGGG	58.946	36.000	0.00	0.00	43.42	4.79
5240	6403	6.054941	GTCATCAAAATGAACAAAAAGGGGT	58.945	36.000	0.00	0.00	43.42	4.95
5241	6404	6.018016	GTCATCAAAATGAACAAAAAGGGGTG	60.018	38.462	0.00	0.00	43.42	4.61
5242	6405	5.428184	TCAAAATGAACAAAAAGGGGTGT	57.572	34.783	0.00	0.00	0.00	4.16
5243	6406	6.546428	TCAAAATGAACAAAAAGGGGTGTA	57.454	33.333	0.00	0.00	0.00	2.90
5244	6407	7.130681	TCAAAATGAACAAAAAGGGGTGTAT	57.869	32.000	0.00	0.00	0.00	2.29
5245	6408	7.213678	TCAAAATGAACAAAAAGGGGTGTATC	58.786	34.615	0.00	0.00	0.00	2.24
5246	6409	6.994421	AAATGAACAAAAAGGGGTGTATCT	57.006	33.333	0.00	0.00	0.00	1.98
5247	6410	8.364142	CAAAATGAACAAAAAGGGGTGTATCTA	58.636	33.333	0.00	0.00	0.00	1.98
5248	6411	8.485578	AAATGAACAAAAAGGGGTGTATCTAA	57.514	30.769	0.00	0.00	0.00	2.10
5249	6412	8.485578	AATGAACAAAAAGGGGTGTATCTAAA	57.514	30.769	0.00	0.00	0.00	1.85
5250	6413	7.899648	TGAACAAAAAGGGGTGTATCTAAAA	57.100	32.000	0.00	0.00	0.00	1.52
5251	6414	7.718525	TGAACAAAAAGGGGTGTATCTAAAAC	58.281	34.615	0.00	0.00	0.00	2.43
5252	6415	7.562088	TGAACAAAAAGGGGTGTATCTAAAACT	59.438	33.333	0.00	0.00	0.00	2.66
5253	6416	8.999905	AACAAAAAGGGGTGTATCTAAAACTA	57.000	30.769	0.00	0.00	0.00	2.24
5254	6417	8.999905	ACAAAAAGGGGTGTATCTAAAACTAA	57.000	30.769	0.00	0.00	0.00	2.24
5255	6418	9.423964	ACAAAAAGGGGTGTATCTAAAACTAAA	57.576	29.630	0.00	0.00	0.00	1.85
5419	6642	7.551585	CAAGACAATCACTCATAGTTAGAGGT	58.448	38.462	0.00	0.00	37.43	3.85
5784	7044	2.031870	AGCTTGTCCCAAACTTGTTCC	58.968	47.619	0.00	0.00	0.00	3.62
5785	7045	2.031870	GCTTGTCCCAAACTTGTTCCT	58.968	47.619	0.00	0.00	0.00	3.36
5786	7046	2.430694	GCTTGTCCCAAACTTGTTCCTT	59.569	45.455	0.00	0.00	0.00	3.36
5787	7047	3.634910	GCTTGTCCCAAACTTGTTCCTTA	59.365	43.478	0.00	0.00	0.00	2.69
5788	7048	4.098807	GCTTGTCCCAAACTTGTTCCTTAA	59.901	41.667	0.00	0.00	0.00	1.85
5789	7049	5.394773	GCTTGTCCCAAACTTGTTCCTTAAA	60.395	40.000	0.00	0.00	0.00	1.52
5790	7050	6.685368	GCTTGTCCCAAACTTGTTCCTTAAAT	60.685	38.462	0.00	0.00	0.00	1.40
5791	7051	6.155475	TGTCCCAAACTTGTTCCTTAAATG	57.845	37.500	0.00	0.00	0.00	2.32
5792	7052	5.069781	TGTCCCAAACTTGTTCCTTAAATGG	59.930	40.000	0.00	0.00	0.00	3.16
5793	7053	5.303333	GTCCCAAACTTGTTCCTTAAATGGA	59.697	40.000	0.00	0.00	0.00	3.41
5794	7054	6.014584	GTCCCAAACTTGTTCCTTAAATGGAT	60.015	38.462	0.00	0.00	35.83	3.41
5795	7055	6.014669	TCCCAAACTTGTTCCTTAAATGGATG	60.015	38.462	0.00	0.00	35.83	3.51
5796	7056	6.239572	CCCAAACTTGTTCCTTAAATGGATGT	60.240	38.462	0.00	0.00	35.83	3.06
5797	7057	7.039363	CCCAAACTTGTTCCTTAAATGGATGTA	60.039	37.037	0.00	0.00	35.83	2.29
5798	7058	8.531146	CCAAACTTGTTCCTTAAATGGATGTAT	58.469	33.333	0.00	0.00	35.83	2.29
5799	7059	9.573133	CAAACTTGTTCCTTAAATGGATGTATC	57.427	33.333	0.00	0.00	35.83	2.24
5800	7060	9.533831	AAACTTGTTCCTTAAATGGATGTATCT	57.466	29.630	0.00	0.00	35.83	1.98
5802	7062	9.838339	ACTTGTTCCTTAAATGGATGTATCTAG	57.162	33.333	0.00	0.00	35.83	2.43
5803	7063	8.677148	TTGTTCCTTAAATGGATGTATCTAGC	57.323	34.615	0.00	0.00	35.83	3.42
5804	7064	7.801104	TGTTCCTTAAATGGATGTATCTAGCA	58.199	34.615	0.00	0.00	35.83	3.49
5805	7065	7.715249	TGTTCCTTAAATGGATGTATCTAGCAC	59.285	37.037	0.00	0.00	35.83	4.40
5806	7066	7.618019	TCCTTAAATGGATGTATCTAGCACT	57.382	36.000	0.00	0.00	0.00	4.40
5807	7067	8.034313	TCCTTAAATGGATGTATCTAGCACTT	57.966	34.615	0.00	0.00	0.00	3.16
5830	7090	7.557358	ACTTGATGCTACATACATCCATTTGAA	59.443	33.333	1.61	0.00	42.68	2.69
5847	7107	1.133915	TGAAGGACAAGCTTTTCCGGT	60.134	47.619	22.77	16.14	36.95	5.28
5848	7108	1.535896	GAAGGACAAGCTTTTCCGGTC	59.464	52.381	22.77	19.77	36.95	4.79
6465	7784	3.926616	ACTGCAGTGTAGCGAGTAAATT	58.073	40.909	20.97	0.00	37.31	1.82
6506	7890	3.096092	TCAAAACTTTGTGACCCTTGCT	58.904	40.909	2.30	0.00	39.18	3.91
6507	7891	4.274147	TCAAAACTTTGTGACCCTTGCTA	58.726	39.130	2.30	0.00	39.18	3.49
6508	7892	4.892934	TCAAAACTTTGTGACCCTTGCTAT	59.107	37.500	2.30	0.00	39.18	2.97
6509	7893	5.362430	TCAAAACTTTGTGACCCTTGCTATT	59.638	36.000	2.30	0.00	39.18	1.73
6510	7894	4.853924	AACTTTGTGACCCTTGCTATTG	57.146	40.909	0.00	0.00	0.00	1.90
6511	7895	3.832527	ACTTTGTGACCCTTGCTATTGT	58.167	40.909	0.00	0.00	0.00	2.71
6512	7896	4.215109	ACTTTGTGACCCTTGCTATTGTT	58.785	39.130	0.00	0.00	0.00	2.83
6513	7897	4.037923	ACTTTGTGACCCTTGCTATTGTTG	59.962	41.667	0.00	0.00	0.00	3.33
6514	7898	3.222173	TGTGACCCTTGCTATTGTTGT	57.778	42.857	0.00	0.00	0.00	3.32
6515	7899	3.146066	TGTGACCCTTGCTATTGTTGTC	58.854	45.455	0.00	0.00	0.00	3.18
6516	7900	2.159627	GTGACCCTTGCTATTGTTGTCG	59.840	50.000	0.00	0.00	0.00	4.35
6517	7901	1.130561	GACCCTTGCTATTGTTGTCGC	59.869	52.381	0.00	0.00	0.00	5.19
6518	7902	1.271379	ACCCTTGCTATTGTTGTCGCT	60.271	47.619	0.00	0.00	0.00	4.93
6519	7903	2.027561	ACCCTTGCTATTGTTGTCGCTA	60.028	45.455	0.00	0.00	0.00	4.26
6520	7904	3.006940	CCCTTGCTATTGTTGTCGCTAA	58.993	45.455	0.00	0.00	0.00	3.09
6521	7905	3.063997	CCCTTGCTATTGTTGTCGCTAAG	59.936	47.826	0.00	0.00	0.00	2.18
6522	7906	3.485877	CCTTGCTATTGTTGTCGCTAAGC	60.486	47.826	0.00	0.00	0.00	3.09
6523	7907	2.006888	TGCTATTGTTGTCGCTAAGCC	58.993	47.619	0.00	0.00	0.00	4.35
6524	7908	2.280628	GCTATTGTTGTCGCTAAGCCT	58.719	47.619	0.00	0.00	0.00	4.58
6525	7909	3.118920	TGCTATTGTTGTCGCTAAGCCTA	60.119	43.478	0.00	0.00	0.00	3.93
6526	7910	4.058817	GCTATTGTTGTCGCTAAGCCTAT	58.941	43.478	0.00	0.00	0.00	2.57
6527	7911	4.084328	GCTATTGTTGTCGCTAAGCCTATG	60.084	45.833	0.00	0.00	0.00	2.23
6528	7912	3.328382	TTGTTGTCGCTAAGCCTATGT	57.672	42.857	0.00	0.00	0.00	2.29
6529	7913	3.328382	TGTTGTCGCTAAGCCTATGTT	57.672	42.857	0.00	0.00	0.00	2.71
6530	7914	3.259064	TGTTGTCGCTAAGCCTATGTTC	58.741	45.455	0.00	0.00	0.00	3.18
6531	7915	2.596904	TGTCGCTAAGCCTATGTTCC	57.403	50.000	0.00	0.00	0.00	3.62
6532	7916	1.138266	TGTCGCTAAGCCTATGTTCCC	59.862	52.381	0.00	0.00	0.00	3.97
6533	7917	1.138266	GTCGCTAAGCCTATGTTCCCA	59.862	52.381	0.00	0.00	0.00	4.37
6534	7918	2.047061	TCGCTAAGCCTATGTTCCCAT	58.953	47.619	0.00	0.00	34.97	4.00
6535	7919	2.438021	TCGCTAAGCCTATGTTCCCATT	59.562	45.455	0.00	0.00	32.29	3.16
6536	7920	3.118038	TCGCTAAGCCTATGTTCCCATTT	60.118	43.478	0.00	0.00	32.29	2.32
6537	7921	4.101898	TCGCTAAGCCTATGTTCCCATTTA	59.898	41.667	0.00	0.00	32.29	1.40
6538	7922	4.213482	CGCTAAGCCTATGTTCCCATTTAC	59.787	45.833	0.00	0.00	32.29	2.01
6539	7923	5.130350	GCTAAGCCTATGTTCCCATTTACA	58.870	41.667	0.00	0.00	32.29	2.41
6540	7924	5.239525	GCTAAGCCTATGTTCCCATTTACAG	59.760	44.000	0.00	0.00	32.29	2.74
6541	7925	5.450818	AAGCCTATGTTCCCATTTACAGA	57.549	39.130	0.00	0.00	32.29	3.41
6542	7926	5.653255	AGCCTATGTTCCCATTTACAGAT	57.347	39.130	0.00	0.00	32.29	2.90
6543	7927	5.625150	AGCCTATGTTCCCATTTACAGATC	58.375	41.667	0.00	0.00	32.29	2.75
6544	7928	4.762251	GCCTATGTTCCCATTTACAGATCC	59.238	45.833	0.00	0.00	32.29	3.36
6545	7929	5.456763	GCCTATGTTCCCATTTACAGATCCT	60.457	44.000	0.00	0.00	32.29	3.24
6546	7930	6.000219	CCTATGTTCCCATTTACAGATCCTG	59.000	44.000	0.00	0.00	33.47	3.86
6547	7931	5.715439	ATGTTCCCATTTACAGATCCTGA	57.285	39.130	0.45	0.00	35.18	3.86
6548	7932	5.102953	TGTTCCCATTTACAGATCCTGAG	57.897	43.478	0.45	0.00	35.18	3.35
6549	7933	4.080356	TGTTCCCATTTACAGATCCTGAGG	60.080	45.833	0.00	0.00	35.18	3.86
6550	7934	3.736094	TCCCATTTACAGATCCTGAGGT	58.264	45.455	0.00	0.00	35.18	3.85
6551	7935	4.111577	TCCCATTTACAGATCCTGAGGTT	58.888	43.478	0.00	0.00	35.18	3.50
6552	7936	4.540099	TCCCATTTACAGATCCTGAGGTTT	59.460	41.667	0.00	0.00	35.18	3.27
6553	7937	5.015178	TCCCATTTACAGATCCTGAGGTTTT	59.985	40.000	0.00	0.00	35.18	2.43
6554	7938	6.216662	TCCCATTTACAGATCCTGAGGTTTTA	59.783	38.462	0.00	0.00	35.18	1.52
6555	7939	6.543831	CCCATTTACAGATCCTGAGGTTTTAG	59.456	42.308	0.00	0.00	35.18	1.85
6556	7940	6.543831	CCATTTACAGATCCTGAGGTTTTAGG	59.456	42.308	0.00	0.00	35.18	2.69
6557	7941	6.945636	TTTACAGATCCTGAGGTTTTAGGA	57.054	37.500	0.00	0.00	46.43	2.94
6630	8016	5.717078	TTTTGCGGATCGGTATATAGACT	57.283	39.130	1.93	0.00	0.00	3.24
6869	10420	3.739401	AGGTAAATTTGACTCAGGGGG	57.261	47.619	0.00	0.00	0.00	5.40
6968	10531	6.036577	TCATGGCAAAATCTAAGGAAAACC	57.963	37.500	0.00	0.00	0.00	3.27
7000	10564	0.095935	CGACTGATTTCTTGCTGGCG	59.904	55.000	0.00	0.00	0.00	5.69
7001	10565	1.160137	GACTGATTTCTTGCTGGCGT	58.840	50.000	0.00	0.00	0.00	5.68
7002	10566	2.346803	GACTGATTTCTTGCTGGCGTA	58.653	47.619	0.00	0.00	0.00	4.42
7003	10567	2.742053	GACTGATTTCTTGCTGGCGTAA	59.258	45.455	0.00	0.00	0.00	3.18
7005	10569	3.058224	ACTGATTTCTTGCTGGCGTAAAC	60.058	43.478	0.00	0.00	0.00	2.01
7006	10570	2.227865	TGATTTCTTGCTGGCGTAAACC	59.772	45.455	0.00	0.00	0.00	3.27
7008	10572	1.975660	TTCTTGCTGGCGTAAACCTT	58.024	45.000	0.00	0.00	0.00	3.50
7010	10574	1.071699	TCTTGCTGGCGTAAACCTTCT	59.928	47.619	0.00	0.00	0.00	2.85
7011	10575	1.464997	CTTGCTGGCGTAAACCTTCTC	59.535	52.381	0.00	0.00	0.00	2.87
7012	10576	0.685097	TGCTGGCGTAAACCTTCTCT	59.315	50.000	0.00	0.00	0.00	3.10
7013	10577	1.337823	TGCTGGCGTAAACCTTCTCTC	60.338	52.381	0.00	0.00	0.00	3.20
7014	10578	1.630148	CTGGCGTAAACCTTCTCTCG	58.370	55.000	0.00	0.00	0.00	4.04
7015	10579	1.201647	CTGGCGTAAACCTTCTCTCGA	59.798	52.381	0.00	0.00	0.00	4.04
7016	10580	1.201647	TGGCGTAAACCTTCTCTCGAG	59.798	52.381	5.93	5.93	0.00	4.04
7017	10581	1.270068	GCGTAAACCTTCTCTCGAGC	58.730	55.000	7.81	0.00	0.00	5.03
7019	10583	1.794437	CGTAAACCTTCTCTCGAGCCG	60.794	57.143	7.81	0.99	0.00	5.52
7021	10585	0.244178	AAACCTTCTCTCGAGCCGTC	59.756	55.000	7.81	0.00	0.00	4.79
7023	10587	2.405594	CTTCTCTCGAGCCGTCGG	59.594	66.667	7.81	6.99	46.80	4.79
7024	10588	2.046604	TTCTCTCGAGCCGTCGGA	60.047	61.111	17.49	0.00	46.80	4.55
7025	10589	2.312398	CTTCTCTCGAGCCGTCGGAC	62.312	65.000	17.49	6.52	46.80	4.79
7026	10590	4.225340	CTCTCGAGCCGTCGGACG	62.225	72.222	22.88	22.88	46.80	4.79
7045	10609	4.427661	GTCTGCGAGCTGAGCCGT	62.428	66.667	14.78	0.00	0.00	5.68
7046	10610	4.121669	TCTGCGAGCTGAGCCGTC	62.122	66.667	14.78	9.03	0.00	4.79
7059	10623	2.919971	GCCGTCAGATGGGCTAATC	58.080	57.895	10.92	0.00	45.93	1.75
7060	10624	0.946221	GCCGTCAGATGGGCTAATCG	60.946	60.000	10.92	0.00	45.93	3.34
7062	10626	1.202533	CCGTCAGATGGGCTAATCGTT	60.203	52.381	0.00	0.00	0.00	3.85
7063	10627	2.035449	CCGTCAGATGGGCTAATCGTTA	59.965	50.000	0.00	0.00	0.00	3.18
7064	10628	3.491964	CCGTCAGATGGGCTAATCGTTAA	60.492	47.826	0.00	0.00	0.00	2.01
7065	10629	4.307432	CGTCAGATGGGCTAATCGTTAAT	58.693	43.478	0.00	0.00	0.00	1.40
7066	10630	4.386049	CGTCAGATGGGCTAATCGTTAATC	59.614	45.833	0.00	0.00	0.00	1.75
7067	10631	4.691216	GTCAGATGGGCTAATCGTTAATCC	59.309	45.833	0.00	0.00	0.00	3.01
7069	10633	3.650942	AGATGGGCTAATCGTTAATCCCA	59.349	43.478	9.23	9.23	46.55	4.37
7071	10635	3.750371	TGGGCTAATCGTTAATCCCATG	58.250	45.455	0.00	0.00	38.72	3.66
7072	10636	2.488153	GGGCTAATCGTTAATCCCATGC	59.512	50.000	0.00	0.00	34.01	4.06
7073	10637	2.159627	GGCTAATCGTTAATCCCATGCG	59.840	50.000	0.00	0.00	0.00	4.73
7074	10638	2.412847	GCTAATCGTTAATCCCATGCGC	60.413	50.000	0.00	0.00	0.00	6.09
7075	10639	1.967319	AATCGTTAATCCCATGCGCT	58.033	45.000	9.73	0.00	0.00	5.92
7077	10641	0.813610	TCGTTAATCCCATGCGCTGG	60.814	55.000	9.73	13.82	45.51	4.85
7078	10642	1.095228	CGTTAATCCCATGCGCTGGT	61.095	55.000	19.93	8.33	44.30	4.00
7080	10644	0.465460	TTAATCCCATGCGCTGGTCC	60.465	55.000	19.93	0.00	44.30	4.46
7081	10645	2.337879	TAATCCCATGCGCTGGTCCC	62.338	60.000	19.93	0.00	44.30	4.46
7086	10650	2.045926	ATGCGCTGGTCCCTTGAC	60.046	61.111	9.73	0.00	40.98	3.18
7097	10661	3.116079	GTCCCTTGACCTTTTACACGA	57.884	47.619	0.00	0.00	35.34	4.35
7098	10662	3.064931	GTCCCTTGACCTTTTACACGAG	58.935	50.000	0.00	0.00	35.34	4.18
7099	10663	2.701951	TCCCTTGACCTTTTACACGAGT	59.298	45.455	0.00	0.00	0.00	4.18
7100	10664	2.806244	CCCTTGACCTTTTACACGAGTG	59.194	50.000	1.13	1.13	0.00	3.51
7101	10665	3.463944	CCTTGACCTTTTACACGAGTGT	58.536	45.455	13.68	13.68	46.87	3.55
7110	10674	3.068881	CACGAGTGTGGTCCCCAT	58.931	61.111	0.00	0.00	42.59	4.00
7111	10675	2.282827	CACGAGTGTGGTCCCCATA	58.717	57.895	0.00	0.00	42.59	2.74
7112	10676	0.108329	CACGAGTGTGGTCCCCATAC	60.108	60.000	2.26	2.26	44.32	2.39
7116	10680	1.077716	GTGTGGTCCCCATACTGCC	60.078	63.158	3.21	0.00	41.45	4.85
7117	10681	1.540118	TGTGGTCCCCATACTGCCA	60.540	57.895	0.00	0.00	35.28	4.92
7118	10682	0.918799	TGTGGTCCCCATACTGCCAT	60.919	55.000	0.00	0.00	35.28	4.40
7120	10684	1.072331	GTGGTCCCCATACTGCCATAG	59.928	57.143	0.00	0.00	35.28	2.23
7121	10685	0.036875	GGTCCCCATACTGCCATAGC	59.963	60.000	0.00	0.00	40.48	2.97
7123	10687	1.421646	GTCCCCATACTGCCATAGCTT	59.578	52.381	0.00	0.00	40.80	3.74
7124	10688	1.421268	TCCCCATACTGCCATAGCTTG	59.579	52.381	0.00	0.00	40.80	4.01
7125	10689	1.421268	CCCCATACTGCCATAGCTTGA	59.579	52.381	0.00	0.00	40.80	3.02
7126	10690	2.040813	CCCCATACTGCCATAGCTTGAT	59.959	50.000	0.00	0.00	40.80	2.57
7128	10692	3.755378	CCCATACTGCCATAGCTTGATTC	59.245	47.826	0.00	0.00	40.80	2.52
7129	10693	4.506271	CCCATACTGCCATAGCTTGATTCT	60.506	45.833	0.00	0.00	40.80	2.40
7130	10694	5.068636	CCATACTGCCATAGCTTGATTCTT	58.931	41.667	0.00	0.00	40.80	2.52
7131	10695	5.533903	CCATACTGCCATAGCTTGATTCTTT	59.466	40.000	0.00	0.00	40.80	2.52
7132	10696	6.040166	CCATACTGCCATAGCTTGATTCTTTT	59.960	38.462	0.00	0.00	40.80	2.27
7133	10697	5.320549	ACTGCCATAGCTTGATTCTTTTG	57.679	39.130	0.00	0.00	40.80	2.44
7134	10698	4.110482	CTGCCATAGCTTGATTCTTTTGC	58.890	43.478	0.00	0.00	40.80	3.68
7136	10700	4.160814	TGCCATAGCTTGATTCTTTTGCAT	59.839	37.500	0.00	0.00	40.80	3.96
7137	10701	4.506654	GCCATAGCTTGATTCTTTTGCATG	59.493	41.667	0.00	0.00	35.50	4.06
7138	10702	4.506654	CCATAGCTTGATTCTTTTGCATGC	59.493	41.667	11.82	11.82	34.18	4.06
7139	10703	3.671008	AGCTTGATTCTTTTGCATGCA	57.329	38.095	18.46	18.46	35.79	3.96
7140	10704	4.202245	AGCTTGATTCTTTTGCATGCAT	57.798	36.364	23.37	4.78	35.79	3.96
7141	10705	3.932710	AGCTTGATTCTTTTGCATGCATG	59.067	39.130	23.37	22.70	35.79	4.06
7142	10706	3.682858	GCTTGATTCTTTTGCATGCATGT	59.317	39.130	26.79	5.18	34.16	3.21
7143	10707	4.153475	GCTTGATTCTTTTGCATGCATGTT	59.847	37.500	26.79	3.46	34.16	2.71
7145	10709	6.621316	TTGATTCTTTTGCATGCATGTTTT	57.379	29.167	26.79	5.21	0.00	2.43
7146	10710	6.621316	TGATTCTTTTGCATGCATGTTTTT	57.379	29.167	26.79	5.77	0.00	1.94
7162	10726	2.588464	TTTTTATTCGCCCTCCACCA	57.412	45.000	0.00	0.00	0.00	4.17
7163	10727	1.828979	TTTTATTCGCCCTCCACCAC	58.171	50.000	0.00	0.00	0.00	4.16
7165	10729	0.912487	TTATTCGCCCTCCACCACCT	60.912	55.000	0.00	0.00	0.00	4.00
7167	10731	2.484287	ATTCGCCCTCCACCACCTTG	62.484	60.000	0.00	0.00	0.00	3.61
7169	10733	4.284550	GCCCTCCACCACCTTGCA	62.285	66.667	0.00	0.00	0.00	4.08
7170	10734	2.765969	CCCTCCACCACCTTGCAT	59.234	61.111	0.00	0.00	0.00	3.96
7171	10735	1.679977	CCCTCCACCACCTTGCATG	60.680	63.158	0.00	0.00	0.00	4.06
7172	10736	2.345760	CCTCCACCACCTTGCATGC	61.346	63.158	11.82	11.82	0.00	4.06
7173	10737	1.303888	CTCCACCACCTTGCATGCT	60.304	57.895	20.33	0.00	0.00	3.79
7176	10740	0.322816	CCACCACCTTGCATGCTAGT	60.323	55.000	24.32	13.89	0.00	2.57
7177	10741	1.065491	CCACCACCTTGCATGCTAGTA	60.065	52.381	24.32	0.00	0.00	1.82
7179	10743	1.909302	ACCACCTTGCATGCTAGTACT	59.091	47.619	24.32	0.00	0.00	2.73
7180	10744	2.283298	CCACCTTGCATGCTAGTACTG	58.717	52.381	24.32	16.44	0.00	2.74
7182	10746	2.932614	CACCTTGCATGCTAGTACTGTC	59.067	50.000	24.32	0.00	0.00	3.51
7184	10748	3.198635	ACCTTGCATGCTAGTACTGTCAT	59.801	43.478	24.32	5.78	0.00	3.06
7185	10749	3.558829	CCTTGCATGCTAGTACTGTCATG	59.441	47.826	24.32	23.71	39.29	3.07
7186	10750	4.436332	CTTGCATGCTAGTACTGTCATGA	58.564	43.478	28.45	17.41	38.77	3.07
7187	10751	4.470334	TGCATGCTAGTACTGTCATGAA	57.530	40.909	28.45	21.38	38.77	2.57
7189	10753	4.081476	TGCATGCTAGTACTGTCATGAAGT	60.081	41.667	28.45	6.39	38.77	3.01
7190	10754	5.127031	TGCATGCTAGTACTGTCATGAAGTA	59.873	40.000	28.45	10.39	38.77	2.24
7191	10755	5.460419	GCATGCTAGTACTGTCATGAAGTAC	59.540	44.000	28.45	25.14	46.85	2.73
7200	10764	8.721019	GTACTGTCATGAAGTACTAGTAGACT	57.279	38.462	25.18	0.00	44.33	3.24
7202	10766	8.721019	ACTGTCATGAAGTACTAGTAGACTAC	57.279	38.462	1.87	4.32	0.00	2.73
7203	10767	7.769970	ACTGTCATGAAGTACTAGTAGACTACC	59.230	40.741	9.06	0.00	0.00	3.18
7204	10768	7.052873	TGTCATGAAGTACTAGTAGACTACCC	58.947	42.308	9.06	0.00	0.00	3.69
7205	10769	7.052873	GTCATGAAGTACTAGTAGACTACCCA	58.947	42.308	9.06	1.16	0.00	4.51
7206	10770	7.555554	GTCATGAAGTACTAGTAGACTACCCAA	59.444	40.741	9.06	0.00	0.00	4.12
7208	10772	8.915036	CATGAAGTACTAGTAGACTACCCAAAT	58.085	37.037	9.06	0.00	0.00	2.32
7209	10773	8.289939	TGAAGTACTAGTAGACTACCCAAATG	57.710	38.462	9.06	0.00	0.00	2.32
7211	10775	7.878547	AGTACTAGTAGACTACCCAAATGAC	57.121	40.000	9.06	0.00	0.00	3.06
7212	10776	7.641249	AGTACTAGTAGACTACCCAAATGACT	58.359	38.462	9.06	2.02	0.00	3.41
7213	10777	8.776119	AGTACTAGTAGACTACCCAAATGACTA	58.224	37.037	9.06	0.00	0.00	2.59
7214	10778	9.571816	GTACTAGTAGACTACCCAAATGACTAT	57.428	37.037	9.06	0.00	0.00	2.12
7215	10779	8.466617	ACTAGTAGACTACCCAAATGACTATG	57.533	38.462	9.06	0.00	0.00	2.23
7217	10781	9.303116	CTAGTAGACTACCCAAATGACTATGAT	57.697	37.037	9.06	0.00	0.00	2.45
7219	10783	9.830186	AGTAGACTACCCAAATGACTATGATAT	57.170	33.333	9.06	0.00	0.00	1.63

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
1	2	1.402107	AATGGGCCGGGATTGATTGC	61.402	55.000	2.18	0.00	0.00	3.56
2	3	0.390124	CAATGGGCCGGGATTGATTG	59.610	55.000	13.08	3.07	32.24	2.67
5	6	0.252012	AAACAATGGGCCGGGATTGA	60.252	50.000	21.41	0.00	34.31	2.57
6	7	0.175531	GAAACAATGGGCCGGGATTG	59.824	55.000	15.64	15.64	35.95	2.67
7	8	0.252012	TGAAACAATGGGCCGGGATT	60.252	50.000	2.18	0.00	0.00	3.01
8	9	0.252012	TTGAAACAATGGGCCGGGAT	60.252	50.000	2.18	0.00	0.00	3.85
9	10	0.470080	TTTGAAACAATGGGCCGGGA	60.470	50.000	2.18	0.00	0.00	5.14
10	11	0.394565	TTTTGAAACAATGGGCCGGG	59.605	50.000	2.18	0.00	0.00	5.73
11	12	2.246719	TTTTTGAAACAATGGGCCGG	57.753	45.000	0.00	0.00	0.00	6.13
27	28	6.061022	AGAATGGCCGGGATTTTAATTTTT	57.939	33.333	2.18	0.00	0.00	1.94
28	29	5.692115	AGAATGGCCGGGATTTTAATTTT	57.308	34.783	2.18	0.00	0.00	1.82
29	30	5.692115	AAGAATGGCCGGGATTTTAATTT	57.308	34.783	2.18	0.00	0.00	1.82
30	31	5.427378	CAAAGAATGGCCGGGATTTTAATT	58.573	37.500	2.18	0.00	0.00	1.40
31	32	4.683129	GCAAAGAATGGCCGGGATTTTAAT	60.683	41.667	2.18	0.00	0.00	1.40
32	33	3.368948	GCAAAGAATGGCCGGGATTTTAA	60.369	43.478	2.18	0.00	0.00	1.52
33	34	2.167487	GCAAAGAATGGCCGGGATTTTA	59.833	45.455	2.18	0.00	0.00	1.52
34	35	1.066215	GCAAAGAATGGCCGGGATTTT	60.066	47.619	2.18	0.00	0.00	1.82
35	36	0.536724	GCAAAGAATGGCCGGGATTT	59.463	50.000	2.18	0.00	0.00	2.17
36	37	0.614415	TGCAAAGAATGGCCGGGATT	60.614	50.000	2.18	0.00	0.00	3.01
37	38	0.614415	TTGCAAAGAATGGCCGGGAT	60.614	50.000	2.18	0.00	0.00	3.85
38	39	0.614415	ATTGCAAAGAATGGCCGGGA	60.614	50.000	1.71	0.00	0.00	5.14
39	40	0.179103	GATTGCAAAGAATGGCCGGG	60.179	55.000	1.71	0.00	0.00	5.73
40	41	0.179103	GGATTGCAAAGAATGGCCGG	60.179	55.000	1.71	0.00	0.00	6.13
41	42	0.179103	GGGATTGCAAAGAATGGCCG	60.179	55.000	1.71	0.00	0.00	6.13
42	43	0.179103	CGGGATTGCAAAGAATGGCC	60.179	55.000	1.71	0.00	0.00	5.36
43	44	0.179103	CCGGGATTGCAAAGAATGGC	60.179	55.000	1.71	0.00	0.00	4.40
44	45	1.185315	ACCGGGATTGCAAAGAATGG	58.815	50.000	6.32	4.87	0.00	3.16
45	46	2.731968	CGAACCGGGATTGCAAAGAATG	60.732	50.000	6.32	0.00	0.00	2.67
46	47	1.472480	CGAACCGGGATTGCAAAGAAT	59.528	47.619	6.32	0.00	0.00	2.40
47	48	0.878416	CGAACCGGGATTGCAAAGAA	59.122	50.000	6.32	0.00	0.00	2.52
48	49	0.958382	CCGAACCGGGATTGCAAAGA	60.958	55.000	6.32	0.00	44.15	2.52
49	50	1.506262	CCGAACCGGGATTGCAAAG	59.494	57.895	6.32	0.00	44.15	2.77
50	51	3.674906	CCGAACCGGGATTGCAAA	58.325	55.556	6.32	0.00	44.15	3.68
64	65	4.367023	CCTCGGGTCGTTTGCCGA	62.367	66.667	0.00	0.00	45.00	5.54
75	76	1.202498	GGTCTAAATCGAACCCTCGGG	60.202	57.143	0.00	0.00	45.49	5.14
76	77	1.535437	CGGTCTAAATCGAACCCTCGG	60.535	57.143	0.00	0.00	45.49	4.63
77	78	1.535437	CCGGTCTAAATCGAACCCTCG	60.535	57.143	0.00	0.00	46.87	4.63
78	79	1.202498	CCCGGTCTAAATCGAACCCTC	60.202	57.143	0.00	0.00	0.00	4.30
79	80	0.828677	CCCGGTCTAAATCGAACCCT	59.171	55.000	0.00	0.00	0.00	4.34
80	81	0.826062	TCCCGGTCTAAATCGAACCC	59.174	55.000	0.00	0.00	0.00	4.11
81	82	2.870411	CAATCCCGGTCTAAATCGAACC	59.130	50.000	0.00	0.00	0.00	3.62
82	83	2.287103	GCAATCCCGGTCTAAATCGAAC	59.713	50.000	0.00	0.00	0.00	3.95
83	84	2.093394	TGCAATCCCGGTCTAAATCGAA	60.093	45.455	0.00	0.00	0.00	3.71
84	85	1.483004	TGCAATCCCGGTCTAAATCGA	59.517	47.619	0.00	0.00	0.00	3.59
85	86	1.948104	TGCAATCCCGGTCTAAATCG	58.052	50.000	0.00	0.00	0.00	3.34
86	87	4.642429	ACTATGCAATCCCGGTCTAAATC	58.358	43.478	0.00	0.00	0.00	2.17
87	88	4.706842	ACTATGCAATCCCGGTCTAAAT	57.293	40.909	0.00	0.00	0.00	1.40
88	89	4.497291	AACTATGCAATCCCGGTCTAAA	57.503	40.909	0.00	0.00	0.00	1.85
89	90	4.039973	CCTAACTATGCAATCCCGGTCTAA	59.960	45.833	0.00	0.00	0.00	2.10
90	91	3.576982	CCTAACTATGCAATCCCGGTCTA	59.423	47.826	0.00	0.00	0.00	2.59
91	92	2.368875	CCTAACTATGCAATCCCGGTCT	59.631	50.000	0.00	0.00	0.00	3.85
92	93	2.550208	CCCTAACTATGCAATCCCGGTC	60.550	54.545	0.00	0.00	0.00	4.79
93	94	1.420138	CCCTAACTATGCAATCCCGGT	59.580	52.381	0.00	0.00	0.00	5.28
94	95	1.420138	ACCCTAACTATGCAATCCCGG	59.580	52.381	0.00	0.00	0.00	5.73
95	96	2.494059	CACCCTAACTATGCAATCCCG	58.506	52.381	0.00	0.00	0.00	5.14
96	97	2.230660	GCACCCTAACTATGCAATCCC	58.769	52.381	0.00	0.00	39.23	3.85
97	98	2.930950	TGCACCCTAACTATGCAATCC	58.069	47.619	0.00	0.00	45.96	3.01
102	103	2.352388	TCGTTTGCACCCTAACTATGC	58.648	47.619	0.00	0.00	39.88	3.14
103	104	4.750098	CCTATCGTTTGCACCCTAACTATG	59.250	45.833	0.00	0.00	0.00	2.23
104	105	4.202326	CCCTATCGTTTGCACCCTAACTAT	60.202	45.833	0.00	0.00	0.00	2.12
105	106	3.133362	CCCTATCGTTTGCACCCTAACTA	59.867	47.826	0.00	0.00	0.00	2.24
106	107	2.093128	CCCTATCGTTTGCACCCTAACT	60.093	50.000	0.00	0.00	0.00	2.24
107	108	2.093341	TCCCTATCGTTTGCACCCTAAC	60.093	50.000	0.00	0.00	0.00	2.34
108	109	2.189676	TCCCTATCGTTTGCACCCTAA	58.810	47.619	0.00	0.00	0.00	2.69
109	110	1.868713	TCCCTATCGTTTGCACCCTA	58.131	50.000	0.00	0.00	0.00	3.53
110	111	1.213296	ATCCCTATCGTTTGCACCCT	58.787	50.000	0.00	0.00	0.00	4.34
111	112	2.052782	AATCCCTATCGTTTGCACCC	57.947	50.000	0.00	0.00	0.00	4.61
112	113	4.272748	GTCTAAATCCCTATCGTTTGCACC	59.727	45.833	0.00	0.00	0.00	5.01
113	114	5.116882	AGTCTAAATCCCTATCGTTTGCAC	58.883	41.667	0.00	0.00	0.00	4.57
114	115	5.353394	AGTCTAAATCCCTATCGTTTGCA	57.647	39.130	0.00	0.00	0.00	4.08
115	116	5.815740	TCAAGTCTAAATCCCTATCGTTTGC	59.184	40.000	0.00	0.00	0.00	3.68
116	117	6.480320	CCTCAAGTCTAAATCCCTATCGTTTG	59.520	42.308	0.00	0.00	0.00	2.93
117	118	6.408206	CCCTCAAGTCTAAATCCCTATCGTTT	60.408	42.308	0.00	0.00	0.00	3.60
118	119	5.070580	CCCTCAAGTCTAAATCCCTATCGTT	59.929	44.000	0.00	0.00	0.00	3.85
119	120	4.589374	CCCTCAAGTCTAAATCCCTATCGT	59.411	45.833	0.00	0.00	0.00	3.73
120	121	4.589374	ACCCTCAAGTCTAAATCCCTATCG	59.411	45.833	0.00	0.00	0.00	2.92
121	122	6.502074	AACCCTCAAGTCTAAATCCCTATC	57.498	41.667	0.00	0.00	0.00	2.08
122	123	6.447084	TCAAACCCTCAAGTCTAAATCCCTAT	59.553	38.462	0.00	0.00	0.00	2.57
123	124	5.788533	TCAAACCCTCAAGTCTAAATCCCTA	59.211	40.000	0.00	0.00	0.00	3.53
124	125	4.601857	TCAAACCCTCAAGTCTAAATCCCT	59.398	41.667	0.00	0.00	0.00	4.20
125	126	4.918588	TCAAACCCTCAAGTCTAAATCCC	58.081	43.478	0.00	0.00	0.00	3.85
126	127	6.183360	CGAATCAAACCCTCAAGTCTAAATCC	60.183	42.308	0.00	0.00	0.00	3.01
127	128	6.675728	GCGAATCAAACCCTCAAGTCTAAATC	60.676	42.308	0.00	0.00	0.00	2.17
128	129	5.123979	GCGAATCAAACCCTCAAGTCTAAAT	59.876	40.000	0.00	0.00	0.00	1.40
129	130	4.454504	GCGAATCAAACCCTCAAGTCTAAA	59.545	41.667	0.00	0.00	0.00	1.85
130	131	4.000988	GCGAATCAAACCCTCAAGTCTAA	58.999	43.478	0.00	0.00	0.00	2.10
131	132	3.596214	GCGAATCAAACCCTCAAGTCTA	58.404	45.455	0.00	0.00	0.00	2.59
132	133	2.427506	GCGAATCAAACCCTCAAGTCT	58.572	47.619	0.00	0.00	0.00	3.24
133	134	1.468914	GGCGAATCAAACCCTCAAGTC	59.531	52.381	0.00	0.00	0.00	3.01
134	135	1.534729	GGCGAATCAAACCCTCAAGT	58.465	50.000	0.00	0.00	0.00	3.16
135	136	0.447801	CGGCGAATCAAACCCTCAAG	59.552	55.000	0.00	0.00	0.00	3.02
136	137	0.035598	TCGGCGAATCAAACCCTCAA	59.964	50.000	7.35	0.00	0.00	3.02
137	138	0.035598	TTCGGCGAATCAAACCCTCA	59.964	50.000	19.83	0.00	0.00	3.86
138	139	0.446616	GTTCGGCGAATCAAACCCTC	59.553	55.000	26.42	5.45	0.00	4.30
139	140	0.958876	GGTTCGGCGAATCAAACCCT	60.959	55.000	26.71	0.00	36.06	4.34
140	141	0.958876	AGGTTCGGCGAATCAAACCC	60.959	55.000	31.88	22.95	41.71	4.11
141	142	0.446616	GAGGTTCGGCGAATCAAACC	59.553	55.000	31.88	24.67	41.20	3.27
142	143	1.128692	CAGAGGTTCGGCGAATCAAAC	59.871	52.381	31.88	21.87	0.00	2.93
143	144	1.001520	TCAGAGGTTCGGCGAATCAAA	59.998	47.619	31.88	13.05	0.00	2.69
144	145	0.606096	TCAGAGGTTCGGCGAATCAA	59.394	50.000	31.88	13.39	0.00	2.57
145	146	0.173481	CTCAGAGGTTCGGCGAATCA	59.827	55.000	31.88	12.59	0.00	2.57
146	147	0.173708	ACTCAGAGGTTCGGCGAATC	59.826	55.000	26.42	25.49	0.00	2.52
147	148	0.608640	AACTCAGAGGTTCGGCGAAT	59.391	50.000	26.42	10.92	0.00	3.34
148	149	0.038526	GAACTCAGAGGTTCGGCGAA	60.039	55.000	19.83	19.83	36.65	4.70
149	150	1.585006	GAACTCAGAGGTTCGGCGA	59.415	57.895	4.99	4.99	36.65	5.54
150	151	4.170723	GAACTCAGAGGTTCGGCG	57.829	61.111	0.00	0.00	36.65	6.46
154	155	3.336138	AAATCCCGAACTCAGAGGTTC	57.664	47.619	1.53	2.93	41.31	3.62
155	156	4.903045	TTAAATCCCGAACTCAGAGGTT	57.097	40.909	1.53	0.00	0.00	3.50
156	157	4.903045	TTTAAATCCCGAACTCAGAGGT	57.097	40.909	1.53	0.00	0.00	3.85
157	158	5.066505	CCATTTTAAATCCCGAACTCAGAGG	59.933	44.000	1.53	0.00	0.00	3.69
158	159	5.880332	TCCATTTTAAATCCCGAACTCAGAG	59.120	40.000	0.00	0.00	0.00	3.35
159	160	5.811190	TCCATTTTAAATCCCGAACTCAGA	58.189	37.500	0.00	0.00	0.00	3.27
160	161	6.699575	ATCCATTTTAAATCCCGAACTCAG	57.300	37.500	0.00	0.00	0.00	3.35
161	162	7.475137	AAATCCATTTTAAATCCCGAACTCA	57.525	32.000	0.00	0.00	0.00	3.41
162	163	8.771920	AAAAATCCATTTTAAATCCCGAACTC	57.228	30.769	0.00	0.00	39.44	3.01
184	185	9.307121	CATAATTTTACGTATGCATGGGAAAAA	57.693	29.630	20.07	15.82	0.00	1.94
185	186	8.687242	TCATAATTTTACGTATGCATGGGAAAA	58.313	29.630	19.06	19.06	0.00	2.29
186	187	8.132362	GTCATAATTTTACGTATGCATGGGAAA	58.868	33.333	10.16	7.65	0.00	3.13
187	188	7.519168	CGTCATAATTTTACGTATGCATGGGAA	60.519	37.037	10.16	0.84	32.16	3.97
188	189	6.073494	CGTCATAATTTTACGTATGCATGGGA	60.073	38.462	10.16	0.00	32.16	4.37
189	190	6.073494	TCGTCATAATTTTACGTATGCATGGG	60.073	38.462	10.16	3.16	37.83	4.00
190	191	6.883129	TCGTCATAATTTTACGTATGCATGG	58.117	36.000	10.16	3.56	37.83	3.66
191	192	7.736017	GTCTCGTCATAATTTTACGTATGCATG	59.264	37.037	10.16	0.00	37.83	4.06
192	193	7.436970	TGTCTCGTCATAATTTTACGTATGCAT	59.563	33.333	3.79	3.79	37.83	3.96
193	194	6.752815	TGTCTCGTCATAATTTTACGTATGCA	59.247	34.615	0.00	0.00	37.83	3.96
194	195	7.157050	TGTCTCGTCATAATTTTACGTATGC	57.843	36.000	0.00	0.00	37.83	3.14
195	196	8.804743	AGTTGTCTCGTCATAATTTTACGTATG	58.195	33.333	0.00	0.00	37.83	2.39
196	197	8.804743	CAGTTGTCTCGTCATAATTTTACGTAT	58.195	33.333	0.00	0.00	37.83	3.06
197	198	7.201376	GCAGTTGTCTCGTCATAATTTTACGTA	60.201	37.037	0.00	0.00	37.83	3.57
198	199	6.400727	GCAGTTGTCTCGTCATAATTTTACGT	60.401	38.462	0.00	0.00	37.83	3.57
199	200	5.952064	GCAGTTGTCTCGTCATAATTTTACG	59.048	40.000	0.00	0.00	37.96	3.18
200	201	6.827641	TGCAGTTGTCTCGTCATAATTTTAC	58.172	36.000	0.00	0.00	0.00	2.01
201	202	6.649141	ACTGCAGTTGTCTCGTCATAATTTTA	59.351	34.615	15.25	0.00	0.00	1.52
202	203	5.470098	ACTGCAGTTGTCTCGTCATAATTTT	59.530	36.000	15.25	0.00	0.00	1.82
203	204	4.997395	ACTGCAGTTGTCTCGTCATAATTT	59.003	37.500	15.25	0.00	0.00	1.82
204	205	4.389992	CACTGCAGTTGTCTCGTCATAATT	59.610	41.667	18.94	0.00	0.00	1.40
205	206	3.928992	CACTGCAGTTGTCTCGTCATAAT	59.071	43.478	18.94	0.00	0.00	1.28
215	216	8.824159	AATATATCAGTATCACTGCAGTTGTC	57.176	34.615	18.94	8.23	45.54	3.18
239	240	9.753674	AAATTTGTCTTCCCATATCAAGTAGAA	57.246	29.630	0.00	0.00	0.00	2.10
241	242	8.960591	ACAAATTTGTCTTCCCATATCAAGTAG	58.039	33.333	18.13	0.00	36.50	2.57
246	247	7.068593	GGATCACAAATTTGTCTTCCCATATCA	59.931	37.037	25.53	3.43	39.91	2.15
276	281	6.095440	ACCATTTCTTGCGACTAAATATTGCT	59.905	34.615	0.00	0.00	0.00	3.91
302	307	4.021456	CCGAACAGGCCATCATATAGTGTA	60.021	45.833	5.01	0.00	0.00	2.90
303	308	3.244215	CCGAACAGGCCATCATATAGTGT	60.244	47.826	5.01	0.00	0.00	3.55
305	310	3.239449	TCCGAACAGGCCATCATATAGT	58.761	45.455	5.01	0.00	40.77	2.12
306	311	3.961480	TCCGAACAGGCCATCATATAG	57.039	47.619	5.01	0.00	40.77	1.31
308	313	3.560025	GGAATCCGAACAGGCCATCATAT	60.560	47.826	5.01	0.00	40.77	1.78
309	314	2.224523	GGAATCCGAACAGGCCATCATA	60.225	50.000	5.01	0.00	40.77	2.15
310	315	1.477558	GGAATCCGAACAGGCCATCAT	60.478	52.381	5.01	0.00	40.77	2.45
311	316	0.107214	GGAATCCGAACAGGCCATCA	60.107	55.000	5.01	0.00	40.77	3.07
312	317	0.819666	GGGAATCCGAACAGGCCATC	60.820	60.000	5.01	0.00	40.77	3.51
313	318	1.227383	GGGAATCCGAACAGGCCAT	59.773	57.895	5.01	0.00	40.77	4.40
314	319	1.910580	GAGGGAATCCGAACAGGCCA	61.911	60.000	5.01	0.00	40.77	5.36
315	320	1.153147	GAGGGAATCCGAACAGGCC	60.153	63.158	0.00	0.00	40.77	5.19
316	321	1.153147	GGAGGGAATCCGAACAGGC	60.153	63.158	0.00	0.00	38.67	4.85
325	330	0.256177	GTTGTGGAGGGGAGGGAATC	59.744	60.000	0.00	0.00	0.00	2.52
326	331	0.178831	AGTTGTGGAGGGGAGGGAAT	60.179	55.000	0.00	0.00	0.00	3.01
327	332	0.840722	GAGTTGTGGAGGGGAGGGAA	60.841	60.000	0.00	0.00	0.00	3.97
328	333	1.229529	GAGTTGTGGAGGGGAGGGA	60.230	63.158	0.00	0.00	0.00	4.20
329	334	2.301738	GGAGTTGTGGAGGGGAGGG	61.302	68.421	0.00	0.00	0.00	4.30
330	335	2.660064	CGGAGTTGTGGAGGGGAGG	61.660	68.421	0.00	0.00	0.00	4.30
331	336	2.982130	CGGAGTTGTGGAGGGGAG	59.018	66.667	0.00	0.00	0.00	4.30
332	337	3.319198	GCGGAGTTGTGGAGGGGA	61.319	66.667	0.00	0.00	0.00	4.81
333	338	3.316573	GAGCGGAGTTGTGGAGGGG	62.317	68.421	0.00	0.00	0.00	4.79
334	339	2.266055	GAGCGGAGTTGTGGAGGG	59.734	66.667	0.00	0.00	0.00	4.30
335	340	2.266055	GGAGCGGAGTTGTGGAGG	59.734	66.667	0.00	0.00	0.00	4.30
336	341	2.266055	GGGAGCGGAGTTGTGGAG	59.734	66.667	0.00	0.00	0.00	3.86
337	342	3.691342	CGGGAGCGGAGTTGTGGA	61.691	66.667	0.00	0.00	0.00	4.02
338	343	4.760047	CCGGGAGCGGAGTTGTGG	62.760	72.222	0.00	0.00	0.00	4.17
339	344	3.691342	TCCGGGAGCGGAGTTGTG	61.691	66.667	0.00	0.00	33.62	3.33
357	362	1.446966	GAACTGTCGCTCCTCCAGC	60.447	63.158	0.00	0.00	45.85	4.85
358	363	0.318441	TTGAACTGTCGCTCCTCCAG	59.682	55.000	0.00	0.00	0.00	3.86
359	364	0.756294	TTTGAACTGTCGCTCCTCCA	59.244	50.000	0.00	0.00	0.00	3.86
360	365	1.878953	TTTTGAACTGTCGCTCCTCC	58.121	50.000	0.00	0.00	0.00	4.30
361	366	2.092838	CGATTTTGAACTGTCGCTCCTC	59.907	50.000	0.00	0.00	0.00	3.71
362	367	2.069273	CGATTTTGAACTGTCGCTCCT	58.931	47.619	0.00	0.00	0.00	3.69
363	368	2.510615	CGATTTTGAACTGTCGCTCC	57.489	50.000	0.00	0.00	0.00	4.70
367	372	0.787787	TCCGCGATTTTGAACTGTCG	59.212	50.000	8.23	0.00	37.17	4.35
368	373	1.798813	ACTCCGCGATTTTGAACTGTC	59.201	47.619	8.23	0.00	0.00	3.51
369	374	1.878953	ACTCCGCGATTTTGAACTGT	58.121	45.000	8.23	0.00	0.00	3.55
370	375	2.574322	CAACTCCGCGATTTTGAACTG	58.426	47.619	8.23	0.00	0.00	3.16
371	376	1.535462	CCAACTCCGCGATTTTGAACT	59.465	47.619	8.23	0.00	0.00	3.01
372	377	1.401018	CCCAACTCCGCGATTTTGAAC	60.401	52.381	8.23	0.00	0.00	3.18
373	378	0.878416	CCCAACTCCGCGATTTTGAA	59.122	50.000	8.23	0.00	0.00	2.69
374	379	0.035598	TCCCAACTCCGCGATTTTGA	59.964	50.000	8.23	0.00	0.00	2.69
375	380	0.168128	GTCCCAACTCCGCGATTTTG	59.832	55.000	8.23	7.14	0.00	2.44
376	381	0.036306	AGTCCCAACTCCGCGATTTT	59.964	50.000	8.23	0.00	0.00	1.82
377	382	0.391263	GAGTCCCAACTCCGCGATTT	60.391	55.000	8.23	0.00	45.26	2.17
378	383	1.218316	GAGTCCCAACTCCGCGATT	59.782	57.895	8.23	0.00	45.26	3.34
379	384	2.893398	GAGTCCCAACTCCGCGAT	59.107	61.111	8.23	0.00	45.26	4.58
386	391	4.104086	TGAGAATATGTGGAGTCCCAACT	58.896	43.478	6.74	3.85	45.59	3.16
387	392	4.162320	TCTGAGAATATGTGGAGTCCCAAC	59.838	45.833	6.74	0.00	45.59	3.77
388	393	4.361783	TCTGAGAATATGTGGAGTCCCAA	58.638	43.478	6.74	0.00	45.59	4.12
389	394	3.994317	TCTGAGAATATGTGGAGTCCCA	58.006	45.455	6.74	4.69	40.95	4.37
390	395	5.559148	AATCTGAGAATATGTGGAGTCCC	57.441	43.478	6.74	0.00	0.00	4.46
391	396	6.481644	GTGAAATCTGAGAATATGTGGAGTCC	59.518	42.308	0.73	0.73	0.00	3.85
392	397	6.199908	CGTGAAATCTGAGAATATGTGGAGTC	59.800	42.308	0.00	0.00	0.00	3.36
393	398	6.045318	CGTGAAATCTGAGAATATGTGGAGT	58.955	40.000	0.00	0.00	0.00	3.85
394	399	5.464722	CCGTGAAATCTGAGAATATGTGGAG	59.535	44.000	0.00	0.00	0.00	3.86
395	400	5.128663	TCCGTGAAATCTGAGAATATGTGGA	59.871	40.000	0.00	0.00	0.00	4.02
396	401	5.359756	TCCGTGAAATCTGAGAATATGTGG	58.640	41.667	0.00	0.00	0.00	4.17
397	402	6.045318	ACTCCGTGAAATCTGAGAATATGTG	58.955	40.000	0.00	0.00	0.00	3.21
398	403	6.227298	ACTCCGTGAAATCTGAGAATATGT	57.773	37.500	0.00	0.00	0.00	2.29
399	404	6.865726	CCTACTCCGTGAAATCTGAGAATATG	59.134	42.308	0.00	0.00	0.00	1.78
400	405	6.778069	TCCTACTCCGTGAAATCTGAGAATAT	59.222	38.462	0.00	0.00	0.00	1.28
401	406	6.127101	TCCTACTCCGTGAAATCTGAGAATA	58.873	40.000	0.00	0.00	0.00	1.75
402	407	4.956700	TCCTACTCCGTGAAATCTGAGAAT	59.043	41.667	0.00	0.00	0.00	2.40
403	408	4.341487	TCCTACTCCGTGAAATCTGAGAA	58.659	43.478	0.00	0.00	0.00	2.87
404	409	3.948473	CTCCTACTCCGTGAAATCTGAGA	59.052	47.826	0.00	0.00	0.00	3.27
405	410	3.067461	CCTCCTACTCCGTGAAATCTGAG	59.933	52.174	0.00	0.00	0.00	3.35
406	411	3.024547	CCTCCTACTCCGTGAAATCTGA	58.975	50.000	0.00	0.00	0.00	3.27
407	412	2.761208	ACCTCCTACTCCGTGAAATCTG	59.239	50.000	0.00	0.00	0.00	2.90
408	413	3.103080	ACCTCCTACTCCGTGAAATCT	57.897	47.619	0.00	0.00	0.00	2.40
409	414	3.889520	AACCTCCTACTCCGTGAAATC	57.110	47.619	0.00	0.00	0.00	2.17
410	415	3.450096	GGTAACCTCCTACTCCGTGAAAT	59.550	47.826	0.00	0.00	0.00	2.17
411	416	2.827921	GGTAACCTCCTACTCCGTGAAA	59.172	50.000	0.00	0.00	0.00	2.69
412	417	2.450476	GGTAACCTCCTACTCCGTGAA	58.550	52.381	0.00	0.00	0.00	3.18
413	418	1.679944	CGGTAACCTCCTACTCCGTGA	60.680	57.143	0.00	0.00	34.38	4.35
414	419	0.737219	CGGTAACCTCCTACTCCGTG	59.263	60.000	0.00	0.00	34.38	4.94
415	420	0.620556	TCGGTAACCTCCTACTCCGT	59.379	55.000	0.00	0.00	39.14	4.69
416	421	1.403323	GTTCGGTAACCTCCTACTCCG	59.597	57.143	0.00	0.00	39.40	4.63
417	422	2.426381	CTGTTCGGTAACCTCCTACTCC	59.574	54.545	0.00	0.00	34.49	3.85
418	423	2.159268	GCTGTTCGGTAACCTCCTACTC	60.159	54.545	0.00	0.00	34.49	2.59
419	424	1.823610	GCTGTTCGGTAACCTCCTACT	59.176	52.381	0.00	0.00	34.49	2.57
420	425	1.134877	GGCTGTTCGGTAACCTCCTAC	60.135	57.143	0.00	0.00	34.49	3.18
421	426	1.188863	GGCTGTTCGGTAACCTCCTA	58.811	55.000	0.00	0.00	34.49	2.94
422	427	1.551019	GGGCTGTTCGGTAACCTCCT	61.551	60.000	0.00	0.00	34.49	3.69
423	428	1.078637	GGGCTGTTCGGTAACCTCC	60.079	63.158	0.00	0.00	34.49	4.30
424	429	0.323957	AAGGGCTGTTCGGTAACCTC	59.676	55.000	0.00	0.00	34.49	3.85
425	430	0.036306	CAAGGGCTGTTCGGTAACCT	59.964	55.000	0.00	0.00	34.49	3.50
426	431	0.250597	ACAAGGGCTGTTCGGTAACC	60.251	55.000	0.00	0.00	32.99	2.85
427	432	0.872388	CACAAGGGCTGTTCGGTAAC	59.128	55.000	0.00	0.00	35.47	2.50
428	433	0.470766	ACACAAGGGCTGTTCGGTAA	59.529	50.000	0.00	0.00	35.47	2.85
429	434	1.001181	GTACACAAGGGCTGTTCGGTA	59.999	52.381	0.00	0.00	35.47	4.02
430	435	0.250166	GTACACAAGGGCTGTTCGGT	60.250	55.000	0.00	0.00	35.47	4.69
431	436	1.289109	CGTACACAAGGGCTGTTCGG	61.289	60.000	0.00	0.00	35.47	4.30
432	437	0.319211	TCGTACACAAGGGCTGTTCG	60.319	55.000	0.00	0.00	35.47	3.95
433	438	2.000447	GATCGTACACAAGGGCTGTTC	59.000	52.381	0.00	0.00	35.47	3.18
434	439	1.346395	TGATCGTACACAAGGGCTGTT	59.654	47.619	0.00	0.00	35.47	3.16
435	440	0.973632	TGATCGTACACAAGGGCTGT	59.026	50.000	0.00	0.00	39.56	4.40
436	441	2.315925	ATGATCGTACACAAGGGCTG	57.684	50.000	0.00	0.00	0.00	4.85
437	442	4.189231	GTTTATGATCGTACACAAGGGCT	58.811	43.478	6.40	0.00	0.00	5.19
438	443	3.936453	TGTTTATGATCGTACACAAGGGC	59.064	43.478	10.78	0.00	0.00	5.19
439	444	6.093495	ACAATGTTTATGATCGTACACAAGGG	59.907	38.462	15.90	11.30	0.00	3.95
440	445	7.072177	ACAATGTTTATGATCGTACACAAGG	57.928	36.000	15.90	13.22	0.00	3.61
441	446	8.443160	AGAACAATGTTTATGATCGTACACAAG	58.557	33.333	15.90	13.75	0.00	3.16
442	447	8.317891	AGAACAATGTTTATGATCGTACACAA	57.682	30.769	15.90	2.95	0.00	3.33
443	448	7.064134	GGAGAACAATGTTTATGATCGTACACA	59.936	37.037	14.63	14.63	0.00	3.72
444	449	7.064134	TGGAGAACAATGTTTATGATCGTACAC	59.936	37.037	0.00	4.56	0.00	2.90
445	450	7.100409	TGGAGAACAATGTTTATGATCGTACA	58.900	34.615	0.00	0.00	0.00	2.90
446	451	7.534085	TGGAGAACAATGTTTATGATCGTAC	57.466	36.000	0.00	0.00	0.00	3.67
447	452	8.038351	TCTTGGAGAACAATGTTTATGATCGTA	58.962	33.333	0.00	0.00	38.65	3.43
448	453	6.878923	TCTTGGAGAACAATGTTTATGATCGT	59.121	34.615	0.00	0.00	38.65	3.73
449	454	7.307493	TCTTGGAGAACAATGTTTATGATCG	57.693	36.000	0.00	0.00	38.65	3.69
450	455	9.565213	CTTTCTTGGAGAACAATGTTTATGATC	57.435	33.333	0.00	0.00	38.65	2.92
451	456	9.300681	TCTTTCTTGGAGAACAATGTTTATGAT	57.699	29.630	0.00	0.00	38.65	2.45
452	457	8.690203	TCTTTCTTGGAGAACAATGTTTATGA	57.310	30.769	0.00	0.00	38.65	2.15
453	458	9.748708	TTTCTTTCTTGGAGAACAATGTTTATG	57.251	29.630	0.00	0.00	38.65	1.90
454	459	9.750125	GTTTCTTTCTTGGAGAACAATGTTTAT	57.250	29.630	0.00	0.00	38.65	1.40
455	460	8.744652	TGTTTCTTTCTTGGAGAACAATGTTTA	58.255	29.630	0.00	0.00	38.65	2.01
456	461	7.610865	TGTTTCTTTCTTGGAGAACAATGTTT	58.389	30.769	0.00	0.00	38.65	2.83
457	462	7.169158	TGTTTCTTTCTTGGAGAACAATGTT	57.831	32.000	0.00	0.00	38.65	2.71
458	463	6.773976	TGTTTCTTTCTTGGAGAACAATGT	57.226	33.333	0.00	0.00	38.65	2.71
459	464	6.698766	CCTTGTTTCTTTCTTGGAGAACAATG	59.301	38.462	0.00	0.00	38.65	2.82
460	465	6.607198	TCCTTGTTTCTTTCTTGGAGAACAAT	59.393	34.615	0.00	0.00	38.65	2.71
461	466	5.949354	TCCTTGTTTCTTTCTTGGAGAACAA	59.051	36.000	0.00	0.00	33.26	2.83
462	467	5.505780	TCCTTGTTTCTTTCTTGGAGAACA	58.494	37.500	0.00	0.00	33.26	3.18
463	468	5.823045	TCTCCTTGTTTCTTTCTTGGAGAAC	59.177	40.000	6.38	0.00	43.56	3.01
464	469	6.001449	TCTCCTTGTTTCTTTCTTGGAGAA	57.999	37.500	6.38	0.00	43.56	2.87
465	470	5.630415	TCTCCTTGTTTCTTTCTTGGAGA	57.370	39.130	0.00	0.00	44.08	3.71
466	471	5.590259	TGTTCTCCTTGTTTCTTTCTTGGAG	59.410	40.000	0.00	0.00	40.47	3.86
467	472	5.505780	TGTTCTCCTTGTTTCTTTCTTGGA	58.494	37.500	0.00	0.00	0.00	3.53
468	473	5.835113	TGTTCTCCTTGTTTCTTTCTTGG	57.165	39.130	0.00	0.00	0.00	3.61
469	474	5.739161	CGTTGTTCTCCTTGTTTCTTTCTTG	59.261	40.000	0.00	0.00	0.00	3.02
470	475	5.163652	CCGTTGTTCTCCTTGTTTCTTTCTT	60.164	40.000	0.00	0.00	0.00	2.52
471	476	4.335594	CCGTTGTTCTCCTTGTTTCTTTCT	59.664	41.667	0.00	0.00	0.00	2.52
472	477	4.095932	ACCGTTGTTCTCCTTGTTTCTTTC	59.904	41.667	0.00	0.00	0.00	2.62
473	478	4.014406	ACCGTTGTTCTCCTTGTTTCTTT	58.986	39.130	0.00	0.00	0.00	2.52
474	479	3.617284	ACCGTTGTTCTCCTTGTTTCTT	58.383	40.909	0.00	0.00	0.00	2.52
475	480	3.203716	GACCGTTGTTCTCCTTGTTTCT	58.796	45.455	0.00	0.00	0.00	2.52
476	481	2.033151	CGACCGTTGTTCTCCTTGTTTC	60.033	50.000	0.00	0.00	0.00	2.78
477	482	1.937899	CGACCGTTGTTCTCCTTGTTT	59.062	47.619	0.00	0.00	0.00	2.83
478	483	1.578583	CGACCGTTGTTCTCCTTGTT	58.421	50.000	0.00	0.00	0.00	2.83
479	484	0.878961	GCGACCGTTGTTCTCCTTGT	60.879	55.000	0.00	0.00	0.00	3.16
480	485	0.600255	AGCGACCGTTGTTCTCCTTG	60.600	55.000	0.00	0.00	0.00	3.61
481	486	0.963962	TAGCGACCGTTGTTCTCCTT	59.036	50.000	0.00	0.00	0.00	3.36
482	487	1.134560	GATAGCGACCGTTGTTCTCCT	59.865	52.381	0.00	0.00	0.00	3.69
483	488	1.134560	AGATAGCGACCGTTGTTCTCC	59.865	52.381	0.00	0.00	0.00	3.71
484	489	2.563471	AGATAGCGACCGTTGTTCTC	57.437	50.000	0.00	0.00	0.00	2.87
485	490	2.223203	CGTAGATAGCGACCGTTGTTCT	60.223	50.000	0.00	0.00	0.00	3.01
486	491	2.107178	CGTAGATAGCGACCGTTGTTC	58.893	52.381	0.00	0.00	0.00	3.18
487	492	1.202222	CCGTAGATAGCGACCGTTGTT	60.202	52.381	0.00	0.00	0.00	2.83
488	493	0.379669	CCGTAGATAGCGACCGTTGT	59.620	55.000	0.00	0.00	0.00	3.32
489	494	0.379669	ACCGTAGATAGCGACCGTTG	59.620	55.000	0.00	0.00	0.00	4.10
490	495	0.659957	GACCGTAGATAGCGACCGTT	59.340	55.000	0.00	0.00	0.00	4.44
491	496	0.462581	TGACCGTAGATAGCGACCGT	60.463	55.000	0.00	0.00	0.00	4.83
492	497	0.873054	ATGACCGTAGATAGCGACCG	59.127	55.000	0.00	0.00	0.00	4.79
527	532	8.147704	GGAGAACAATGTTTATTCCCTCAAAAA	58.852	33.333	0.00	0.00	0.00	1.94
528	533	7.288852	TGGAGAACAATGTTTATTCCCTCAAAA	59.711	33.333	16.87	1.95	0.00	2.44
529	534	6.780031	TGGAGAACAATGTTTATTCCCTCAAA	59.220	34.615	16.87	3.31	0.00	2.69
530	535	6.310941	TGGAGAACAATGTTTATTCCCTCAA	58.689	36.000	16.87	3.90	0.00	3.02
531	536	5.886609	TGGAGAACAATGTTTATTCCCTCA	58.113	37.500	16.87	2.97	0.00	3.86
532	537	6.659242	TCTTGGAGAACAATGTTTATTCCCTC	59.341	38.462	16.87	10.58	38.65	4.30
533	538	6.552008	TCTTGGAGAACAATGTTTATTCCCT	58.448	36.000	16.87	3.44	38.65	4.20
534	539	6.834168	TCTTGGAGAACAATGTTTATTCCC	57.166	37.500	16.87	8.57	38.65	3.97
535	540	8.576442	TCTTTCTTGGAGAACAATGTTTATTCC	58.424	33.333	14.33	14.33	38.65	3.01
536	541	9.965824	TTCTTTCTTGGAGAACAATGTTTATTC	57.034	29.630	0.00	0.00	38.65	1.75
538	543	9.750125	GTTTCTTTCTTGGAGAACAATGTTTAT	57.250	29.630	0.00	0.00	38.65	1.40
539	544	8.744652	TGTTTCTTTCTTGGAGAACAATGTTTA	58.255	29.630	0.00	0.00	38.65	2.01
540	545	7.610865	TGTTTCTTTCTTGGAGAACAATGTTT	58.389	30.769	0.00	0.00	38.65	2.83
541	546	7.169158	TGTTTCTTTCTTGGAGAACAATGTT	57.831	32.000	0.00	0.00	38.65	2.71
542	547	6.773976	TGTTTCTTTCTTGGAGAACAATGT	57.226	33.333	0.00	0.00	38.65	2.71
543	548	6.197096	CGTTGTTTCTTTCTTGGAGAACAATG	59.803	38.462	0.00	0.00	38.65	2.82
544	549	6.094881	TCGTTGTTTCTTTCTTGGAGAACAAT	59.905	34.615	0.00	0.00	38.65	2.71
545	550	5.413213	TCGTTGTTTCTTTCTTGGAGAACAA	59.587	36.000	0.00	0.00	33.26	2.83
546	551	4.938832	TCGTTGTTTCTTTCTTGGAGAACA	59.061	37.500	0.00	0.00	33.26	3.18
547	552	5.293569	TCTCGTTGTTTCTTTCTTGGAGAAC	59.706	40.000	0.00	0.00	33.26	3.01
548	553	5.424757	TCTCGTTGTTTCTTTCTTGGAGAA	58.575	37.500	0.00	0.00	31.28	2.87
549	554	5.018539	TCTCGTTGTTTCTTTCTTGGAGA	57.981	39.130	0.00	0.00	0.00	3.71
550	555	5.064707	TGTTCTCGTTGTTTCTTTCTTGGAG	59.935	40.000	0.00	0.00	0.00	3.86
551	556	4.938832	TGTTCTCGTTGTTTCTTTCTTGGA	59.061	37.500	0.00	0.00	0.00	3.53
560	565	2.286008	GGACCGTTGTTCTCGTTGTTTC	60.286	50.000	0.00	0.00	0.00	2.78
880	885	3.130450	AGGGAGAGAGAGAGAGGAATGA	58.870	50.000	0.00	0.00	0.00	2.57
1657	1683	4.156008	GTCGAGCATAACCTGTCCAAAAAT	59.844	41.667	0.00	0.00	0.00	1.82
1857	1883	6.536941	TCGCATACAATTAAATACAGACAGCA	59.463	34.615	0.00	0.00	0.00	4.41
2417	2476	4.762251	ACAGCAAGGAGATCCAGTTTAAAC	59.238	41.667	10.47	10.47	38.89	2.01
2429	2488	8.097038	GTCATATAATGGATTACAGCAAGGAGA	58.903	37.037	0.00	0.00	0.00	3.71
2589	2723	2.036733	TGGCACTGTGAAGTAGTACACC	59.963	50.000	12.86	0.00	36.35	4.16
2615	2749	6.356556	TGTGATACTATTCAATCTGTTGGGG	58.643	40.000	0.00	0.00	35.99	4.96
2966	3139	3.728385	ATTCCAAGGTTCCCTCTTGAG	57.272	47.619	5.51	0.00	42.94	3.02
3236	3419	4.709250	TCCTGTGCAGTGTAAATGTGTAA	58.291	39.130	0.00	0.00	32.28	2.41
3237	3420	4.344359	TCCTGTGCAGTGTAAATGTGTA	57.656	40.909	0.00	0.00	32.28	2.90
3238	3421	3.207265	TCCTGTGCAGTGTAAATGTGT	57.793	42.857	0.00	0.00	32.28	3.72
3239	3422	4.566545	TTTCCTGTGCAGTGTAAATGTG	57.433	40.909	0.00	0.00	32.28	3.21
3240	3423	4.497340	CGTTTTCCTGTGCAGTGTAAATGT	60.497	41.667	0.00	0.00	32.28	2.71
3241	3424	3.974401	CGTTTTCCTGTGCAGTGTAAATG	59.026	43.478	0.00	0.00	33.24	2.32
3242	3425	3.880490	TCGTTTTCCTGTGCAGTGTAAAT	59.120	39.130	0.00	0.00	0.00	1.40
3243	3426	3.271729	TCGTTTTCCTGTGCAGTGTAAA	58.728	40.909	0.00	0.00	0.00	2.01
3314	3497	6.372659	ACTCACAATACTTGGCTCTGTAATTG	59.627	38.462	0.00	0.00	34.12	2.32
3650	4017	3.411446	CAGCTGTACAGGATCACCAAAA	58.589	45.455	23.95	0.00	38.94	2.44
4121	4644	4.634004	CCCACATATTTCACAGTTCGCTTA	59.366	41.667	0.00	0.00	0.00	3.09
4401	4935	8.038351	AGAAGCCTGTTAAGAAGAAATACTCTC	58.962	37.037	0.00	0.00	31.02	3.20
4659	5786	7.170965	TCTTTCTAAGGTTGAAGATCAGCATT	58.829	34.615	0.00	0.28	35.83	3.56
5195	6358	3.511146	ACAAGTATTTTCGGACGGAGGTA	59.489	43.478	0.00	0.00	0.00	3.08
5197	6360	2.928116	GACAAGTATTTTCGGACGGAGG	59.072	50.000	0.00	0.00	0.00	4.30
5198	6361	3.581755	TGACAAGTATTTTCGGACGGAG	58.418	45.455	0.00	0.00	0.00	4.63
5201	6364	5.524511	TTGATGACAAGTATTTTCGGACG	57.475	39.130	0.00	0.00	0.00	4.79
5202	6365	8.020819	TCATTTTGATGACAAGTATTTTCGGAC	58.979	33.333	0.00	0.00	37.32	4.79
5203	6366	8.105097	TCATTTTGATGACAAGTATTTTCGGA	57.895	30.769	0.00	0.00	37.32	4.55
5204	6367	8.638565	GTTCATTTTGATGACAAGTATTTTCGG	58.361	33.333	0.00	0.00	37.32	4.30
5205	6368	9.179552	TGTTCATTTTGATGACAAGTATTTTCG	57.820	29.630	0.00	0.00	37.32	3.46
5211	6374	9.311916	CCTTTTTGTTCATTTTGATGACAAGTA	57.688	29.630	0.00	0.00	37.32	2.24
5212	6375	7.280652	CCCTTTTTGTTCATTTTGATGACAAGT	59.719	33.333	0.00	0.00	37.32	3.16
5213	6376	7.254863	CCCCTTTTTGTTCATTTTGATGACAAG	60.255	37.037	0.00	0.00	37.32	3.16
5214	6377	6.541641	CCCCTTTTTGTTCATTTTGATGACAA	59.458	34.615	0.00	0.00	0.00	3.18
5215	6378	6.054295	CCCCTTTTTGTTCATTTTGATGACA	58.946	36.000	0.00	0.00	0.00	3.58
5216	6379	6.018016	CACCCCTTTTTGTTCATTTTGATGAC	60.018	38.462	0.00	0.00	0.00	3.06
5217	6380	6.054295	CACCCCTTTTTGTTCATTTTGATGA	58.946	36.000	0.00	0.00	0.00	2.92
5218	6381	5.821995	ACACCCCTTTTTGTTCATTTTGATG	59.178	36.000	0.00	0.00	0.00	3.07
5219	6382	6.000246	ACACCCCTTTTTGTTCATTTTGAT	58.000	33.333	0.00	0.00	0.00	2.57
5220	6383	5.428184	ACACCCCTTTTTGTTCATTTTGA	57.572	34.783	0.00	0.00	0.00	2.69
5221	6384	7.216494	AGATACACCCCTTTTTGTTCATTTTG	58.784	34.615	0.00	0.00	0.00	2.44
5222	6385	7.373617	AGATACACCCCTTTTTGTTCATTTT	57.626	32.000	0.00	0.00	0.00	1.82
5223	6386	6.994421	AGATACACCCCTTTTTGTTCATTT	57.006	33.333	0.00	0.00	0.00	2.32
5224	6387	8.485578	TTTAGATACACCCCTTTTTGTTCATT	57.514	30.769	0.00	0.00	0.00	2.57
5225	6388	8.364894	GTTTTAGATACACCCCTTTTTGTTCAT	58.635	33.333	0.00	0.00	0.00	2.57
5226	6389	7.562088	AGTTTTAGATACACCCCTTTTTGTTCA	59.438	33.333	0.00	0.00	0.00	3.18
5227	6390	7.948357	AGTTTTAGATACACCCCTTTTTGTTC	58.052	34.615	0.00	0.00	0.00	3.18
5228	6391	7.907841	AGTTTTAGATACACCCCTTTTTGTT	57.092	32.000	0.00	0.00	0.00	2.83
5229	6392	8.999905	TTAGTTTTAGATACACCCCTTTTTGT	57.000	30.769	0.00	0.00	0.00	2.83
5272	6435	9.753674	ACTTGTCATCAAAATAAATAGAAGGGA	57.246	29.630	0.00	0.00	32.87	4.20
5283	6446	8.664798	CGTCCAGAAATACTTGTCATCAAAATA	58.335	33.333	0.00	0.00	32.87	1.40
5285	6448	6.072728	CCGTCCAGAAATACTTGTCATCAAAA	60.073	38.462	0.00	0.00	32.87	2.44
5286	6449	5.411361	CCGTCCAGAAATACTTGTCATCAAA	59.589	40.000	0.00	0.00	32.87	2.69
5288	6451	4.221924	TCCGTCCAGAAATACTTGTCATCA	59.778	41.667	0.00	0.00	0.00	3.07
5289	6452	4.755411	TCCGTCCAGAAATACTTGTCATC	58.245	43.478	0.00	0.00	0.00	2.92
5291	6454	3.056107	CCTCCGTCCAGAAATACTTGTCA	60.056	47.826	0.00	0.00	0.00	3.58
5300	6463	1.553706	GTACTCCCTCCGTCCAGAAA	58.446	55.000	0.00	0.00	0.00	2.52
5304	6467	0.928505	TATGGTACTCCCTCCGTCCA	59.071	55.000	0.00	0.00	0.00	4.02
5419	6642	0.677731	CGGCAAGCATGGGAAAGAGA	60.678	55.000	0.00	0.00	0.00	3.10
5748	7008	1.056660	AGCTTTTTCGGACAGAGGGA	58.943	50.000	0.00	0.00	0.00	4.20
5784	7044	8.893219	TCAAGTGCTAGATACATCCATTTAAG	57.107	34.615	0.00	0.00	0.00	1.85
5785	7045	9.276590	CATCAAGTGCTAGATACATCCATTTAA	57.723	33.333	0.00	0.00	0.00	1.52
5786	7046	8.837788	CATCAAGTGCTAGATACATCCATTTA	57.162	34.615	0.00	0.00	0.00	1.40
5787	7047	7.741027	CATCAAGTGCTAGATACATCCATTT	57.259	36.000	0.00	0.00	0.00	2.32
5803	7063	6.872628	AATGGATGTATGTAGCATCAAGTG	57.127	37.500	7.46	0.00	43.17	3.16
5804	7064	7.056006	TCAAATGGATGTATGTAGCATCAAGT	58.944	34.615	7.46	0.00	43.17	3.16
5805	7065	7.500720	TCAAATGGATGTATGTAGCATCAAG	57.499	36.000	7.46	0.00	43.17	3.02
5806	7066	7.013559	CCTTCAAATGGATGTATGTAGCATCAA	59.986	37.037	7.46	0.00	43.17	2.57
5807	7067	6.487668	CCTTCAAATGGATGTATGTAGCATCA	59.512	38.462	7.46	0.00	43.17	3.07
5815	7075	5.359009	AGCTTGTCCTTCAAATGGATGTATG	59.641	40.000	0.00	0.00	35.87	2.39
5830	7090	0.602905	CGACCGGAAAAGCTTGTCCT	60.603	55.000	29.16	14.83	0.00	3.85
5847	7107	3.214328	GTTACCGTAATACTCCCTCCGA	58.786	50.000	0.00	0.00	0.00	4.55
5848	7108	2.951642	TGTTACCGTAATACTCCCTCCG	59.048	50.000	0.00	0.00	0.00	4.63
6506	7890	5.018539	ACATAGGCTTAGCGACAACAATA	57.981	39.130	0.00	0.00	0.00	1.90
6507	7891	3.873910	ACATAGGCTTAGCGACAACAAT	58.126	40.909	0.00	0.00	0.00	2.71
6508	7892	3.328382	ACATAGGCTTAGCGACAACAA	57.672	42.857	0.00	0.00	0.00	2.83
6509	7893	3.259064	GAACATAGGCTTAGCGACAACA	58.741	45.455	0.00	0.00	0.00	3.33
6510	7894	2.608090	GGAACATAGGCTTAGCGACAAC	59.392	50.000	0.00	0.00	0.00	3.32
6511	7895	2.419574	GGGAACATAGGCTTAGCGACAA	60.420	50.000	0.00	0.00	0.00	3.18
6512	7896	1.138266	GGGAACATAGGCTTAGCGACA	59.862	52.381	0.00	0.00	0.00	4.35
6513	7897	1.138266	TGGGAACATAGGCTTAGCGAC	59.862	52.381	0.00	0.00	33.40	5.19
6514	7898	1.491668	TGGGAACATAGGCTTAGCGA	58.508	50.000	0.00	0.00	33.40	4.93
6521	7905	9.536554	TCAGGATCTGTAAATGGGAACATAGGC	62.537	44.444	0.00	0.00	40.62	3.93
6522	7906	6.183361	TCAGGATCTGTAAATGGGAACATAGG	60.183	42.308	0.00	0.00	40.62	2.57
6523	7907	6.830912	TCAGGATCTGTAAATGGGAACATAG	58.169	40.000	0.00	0.00	40.62	2.23
6524	7908	6.183361	CCTCAGGATCTGTAAATGGGAACATA	60.183	42.308	0.00	0.00	40.62	2.29
6525	7909	5.398353	CCTCAGGATCTGTAAATGGGAACAT	60.398	44.000	0.00	0.00	42.16	2.71
6526	7910	4.080356	CCTCAGGATCTGTAAATGGGAACA	60.080	45.833	0.00	0.00	37.50	3.18
6527	7911	4.080299	ACCTCAGGATCTGTAAATGGGAAC	60.080	45.833	0.00	0.00	32.61	3.62
6528	7912	4.111577	ACCTCAGGATCTGTAAATGGGAA	58.888	43.478	0.00	0.00	32.61	3.97
6529	7913	3.736094	ACCTCAGGATCTGTAAATGGGA	58.264	45.455	0.00	0.00	32.61	4.37
6530	7914	4.510167	AACCTCAGGATCTGTAAATGGG	57.490	45.455	0.00	0.00	32.61	4.00
6531	7915	6.543831	CCTAAAACCTCAGGATCTGTAAATGG	59.456	42.308	0.00	0.00	33.42	3.16
6532	7916	7.338710	TCCTAAAACCTCAGGATCTGTAAATG	58.661	38.462	0.00	0.00	35.99	2.32
6533	7917	7.510675	TCCTAAAACCTCAGGATCTGTAAAT	57.489	36.000	0.00	0.00	35.99	1.40
6534	7918	6.945636	TCCTAAAACCTCAGGATCTGTAAA	57.054	37.500	0.00	0.00	35.99	2.01
6535	7919	6.443849	ACATCCTAAAACCTCAGGATCTGTAA	59.556	38.462	0.00	0.00	46.62	2.41
6536	7920	5.964477	ACATCCTAAAACCTCAGGATCTGTA	59.036	40.000	0.00	0.00	46.62	2.74
6537	7921	4.785376	ACATCCTAAAACCTCAGGATCTGT	59.215	41.667	0.00	0.00	46.62	3.41
6538	7922	5.365021	ACATCCTAAAACCTCAGGATCTG	57.635	43.478	0.00	0.00	46.62	2.90
6539	7923	7.348274	TGATAACATCCTAAAACCTCAGGATCT	59.652	37.037	0.00	0.00	46.62	2.75
6540	7924	7.509546	TGATAACATCCTAAAACCTCAGGATC	58.490	38.462	0.00	0.00	46.62	3.36
6542	7926	6.884472	TGATAACATCCTAAAACCTCAGGA	57.116	37.500	0.00	0.00	44.90	3.86
6543	7927	7.736447	GATGATAACATCCTAAAACCTCAGG	57.264	40.000	1.60	0.00	44.89	3.86
6557	7941	9.322773	CAACTGACAGTCATAAGATGATAACAT	57.677	33.333	8.93	0.00	42.04	2.71
6558	7942	7.765819	CCAACTGACAGTCATAAGATGATAACA	59.234	37.037	8.93	0.00	42.04	2.41
6559	7943	7.981789	TCCAACTGACAGTCATAAGATGATAAC	59.018	37.037	8.93	0.00	42.04	1.89
6722	10018	2.029073	CGTCGCCACCAGAACAGT	59.971	61.111	0.00	0.00	0.00	3.55
6849	10400	2.291605	GCCCCCTGAGTCAAATTTACCT	60.292	50.000	0.00	0.00	0.00	3.08
6914	10465	8.449251	AATAATTTGACACAAAAGTGCCATTT	57.551	26.923	0.00	0.00	0.00	2.32
6915	10466	8.449251	AAATAATTTGACACAAAAGTGCCATT	57.551	26.923	0.00	0.00	0.00	3.16
6968	10531	6.109359	AGAAATCAGTCGGTTGAATCTAAGG	58.891	40.000	6.84	0.00	30.30	2.69
6973	10536	4.154918	AGCAAGAAATCAGTCGGTTGAATC	59.845	41.667	0.00	0.00	0.00	2.52
7000	10564	1.201880	ACGGCTCGAGAGAAGGTTTAC	59.798	52.381	18.75	0.00	41.32	2.01
7001	10565	1.471684	GACGGCTCGAGAGAAGGTTTA	59.528	52.381	18.75	0.00	41.32	2.01
7002	10566	0.244178	GACGGCTCGAGAGAAGGTTT	59.756	55.000	18.75	0.00	41.32	3.27
7003	10567	1.884444	GACGGCTCGAGAGAAGGTT	59.116	57.895	18.75	0.00	41.32	3.50
7005	10569	2.405594	CGACGGCTCGAGAGAAGG	59.594	66.667	18.75	1.78	43.06	3.46
7006	10570	2.107292	TCCGACGGCTCGAGAGAAG	61.107	63.158	18.75	5.97	43.06	2.85
7008	10572	2.818714	GTCCGACGGCTCGAGAGA	60.819	66.667	18.75	0.00	43.06	3.10
7028	10592	4.427661	ACGGCTCAGCTCGCAGAC	62.428	66.667	10.84	0.00	0.00	3.51
7029	10593	4.121669	GACGGCTCAGCTCGCAGA	62.122	66.667	10.84	0.00	0.00	4.26
7030	10594	4.426112	TGACGGCTCAGCTCGCAG	62.426	66.667	7.37	5.18	0.00	5.18
7031	10595	4.426112	CTGACGGCTCAGCTCGCA	62.426	66.667	7.37	6.12	37.72	5.10
7032	10596	3.423162	ATCTGACGGCTCAGCTCGC	62.423	63.158	7.37	0.00	43.45	5.03
7034	10598	1.227205	CCATCTGACGGCTCAGCTC	60.227	63.158	0.00	0.00	43.45	4.09
7035	10599	2.729479	CCCATCTGACGGCTCAGCT	61.729	63.158	0.00	0.00	43.45	4.24
7036	10600	2.202987	CCCATCTGACGGCTCAGC	60.203	66.667	8.52	0.00	43.45	4.26
7037	10601	2.202987	GCCCATCTGACGGCTCAG	60.203	66.667	9.73	7.40	44.94	3.35
7041	10605	0.946221	CGATTAGCCCATCTGACGGC	60.946	60.000	9.10	9.10	46.09	5.68
7042	10606	0.389391	ACGATTAGCCCATCTGACGG	59.611	55.000	0.00	0.00	0.00	4.79
7043	10607	2.225068	AACGATTAGCCCATCTGACG	57.775	50.000	0.00	0.00	0.00	4.35
7044	10608	4.691216	GGATTAACGATTAGCCCATCTGAC	59.309	45.833	0.00	0.00	0.00	3.51
7045	10609	4.262894	GGGATTAACGATTAGCCCATCTGA	60.263	45.833	0.00	0.00	33.91	3.27
7046	10610	4.003648	GGGATTAACGATTAGCCCATCTG	58.996	47.826	0.00	0.00	33.91	2.90
7048	10612	4.015872	TGGGATTAACGATTAGCCCATC	57.984	45.455	3.36	0.00	36.94	3.51
7049	10613	4.335416	CATGGGATTAACGATTAGCCCAT	58.665	43.478	13.94	13.94	45.44	4.00
7051	10615	2.488153	GCATGGGATTAACGATTAGCCC	59.512	50.000	0.00	0.00	34.16	5.19
7052	10616	2.159627	CGCATGGGATTAACGATTAGCC	59.840	50.000	3.11	0.00	0.00	3.93
7053	10617	2.412847	GCGCATGGGATTAACGATTAGC	60.413	50.000	14.90	0.00	0.00	3.09
7054	10618	3.067106	AGCGCATGGGATTAACGATTAG	58.933	45.455	14.90	0.00	0.00	1.73
7055	10619	2.805671	CAGCGCATGGGATTAACGATTA	59.194	45.455	14.90	0.00	0.00	1.75
7056	10620	1.603802	CAGCGCATGGGATTAACGATT	59.396	47.619	14.90	0.00	0.00	3.34
7057	10621	1.229428	CAGCGCATGGGATTAACGAT	58.771	50.000	14.90	0.00	0.00	3.73
7059	10623	1.648720	CCAGCGCATGGGATTAACG	59.351	57.895	14.90	0.00	46.36	3.18
7069	10633	2.045926	GTCAAGGGACCAGCGCAT	60.046	61.111	11.47	0.00	38.12	4.73
7077	10641	3.064931	CTCGTGTAAAAGGTCAAGGGAC	58.935	50.000	0.00	0.00	43.55	4.46
7078	10642	2.701951	ACTCGTGTAAAAGGTCAAGGGA	59.298	45.455	0.00	0.00	0.00	4.20
7080	10644	3.247648	CACACTCGTGTAAAAGGTCAAGG	59.752	47.826	1.90	0.00	42.83	3.61
7081	10645	3.247648	CCACACTCGTGTAAAAGGTCAAG	59.752	47.826	1.90	0.00	42.83	3.02
7082	10646	3.199677	CCACACTCGTGTAAAAGGTCAA	58.800	45.455	1.90	0.00	42.83	3.18
7086	10650	2.140717	GGACCACACTCGTGTAAAAGG	58.859	52.381	1.90	2.86	42.83	3.11
7087	10651	2.140717	GGGACCACACTCGTGTAAAAG	58.859	52.381	1.90	0.00	42.83	2.27
7102	10666	0.036875	GCTATGGCAGTATGGGGACC	59.963	60.000	0.00	0.00	44.28	4.46
7103	10667	1.059913	AGCTATGGCAGTATGGGGAC	58.940	55.000	3.10	0.00	41.70	4.46
7105	10669	1.421268	TCAAGCTATGGCAGTATGGGG	59.579	52.381	3.10	0.00	41.70	4.96
7106	10670	2.936919	TCAAGCTATGGCAGTATGGG	57.063	50.000	3.10	0.00	41.70	4.00
7107	10671	4.649692	AGAATCAAGCTATGGCAGTATGG	58.350	43.478	3.10	0.00	41.70	2.74
7108	10672	6.630444	AAAGAATCAAGCTATGGCAGTATG	57.370	37.500	3.10	0.00	41.70	2.39
7109	10673	6.460676	GCAAAAGAATCAAGCTATGGCAGTAT	60.461	38.462	3.10	0.00	41.70	2.12
7110	10674	5.163622	GCAAAAGAATCAAGCTATGGCAGTA	60.164	40.000	3.10	0.00	41.70	2.74
7111	10675	4.381292	GCAAAAGAATCAAGCTATGGCAGT	60.381	41.667	3.10	0.00	41.70	4.40
7112	10676	4.110482	GCAAAAGAATCAAGCTATGGCAG	58.890	43.478	3.10	0.00	41.70	4.85
7113	10677	3.510753	TGCAAAAGAATCAAGCTATGGCA	59.489	39.130	3.10	0.00	41.70	4.92
7114	10678	4.114058	TGCAAAAGAATCAAGCTATGGC	57.886	40.909	0.00	0.00	39.06	4.40
7116	10680	5.106442	TGCATGCAAAAGAATCAAGCTATG	58.894	37.500	20.30	0.00	0.00	2.23
7117	10681	5.333299	TGCATGCAAAAGAATCAAGCTAT	57.667	34.783	20.30	0.00	0.00	2.97
7118	10682	4.787260	TGCATGCAAAAGAATCAAGCTA	57.213	36.364	20.30	0.00	0.00	3.32
7120	10684	3.682858	ACATGCATGCAAAAGAATCAAGC	59.317	39.130	26.68	0.00	0.00	4.01
7121	10685	5.856126	AACATGCATGCAAAAGAATCAAG	57.144	34.783	26.68	6.94	0.00	3.02
7123	10687	6.621316	AAAAACATGCATGCAAAAGAATCA	57.379	29.167	26.68	0.00	0.00	2.57
7143	10707	2.164338	GTGGTGGAGGGCGAATAAAAA	58.836	47.619	0.00	0.00	0.00	1.94
7145	10709	0.034863	GGTGGTGGAGGGCGAATAAA	60.035	55.000	0.00	0.00	0.00	1.40
7146	10710	0.912487	AGGTGGTGGAGGGCGAATAA	60.912	55.000	0.00	0.00	0.00	1.40
7148	10712	2.231380	AAGGTGGTGGAGGGCGAAT	61.231	57.895	0.00	0.00	0.00	3.34
7149	10713	2.852075	AAGGTGGTGGAGGGCGAA	60.852	61.111	0.00	0.00	0.00	4.70
7150	10714	3.636231	CAAGGTGGTGGAGGGCGA	61.636	66.667	0.00	0.00	0.00	5.54
7152	10716	3.590466	ATGCAAGGTGGTGGAGGGC	62.590	63.158	0.00	0.00	0.00	5.19
7155	10719	0.035152	TAGCATGCAAGGTGGTGGAG	60.035	55.000	21.98	0.00	0.00	3.86
7156	10720	0.035152	CTAGCATGCAAGGTGGTGGA	60.035	55.000	21.98	0.00	0.00	4.02
7157	10721	0.322816	ACTAGCATGCAAGGTGGTGG	60.323	55.000	21.98	4.66	29.28	4.61
7158	10722	2.009774	GTACTAGCATGCAAGGTGGTG	58.990	52.381	21.98	0.00	32.82	4.17
7159	10723	1.909302	AGTACTAGCATGCAAGGTGGT	59.091	47.619	21.98	14.41	34.96	4.16
7160	10724	2.283298	CAGTACTAGCATGCAAGGTGG	58.717	52.381	21.98	3.13	0.00	4.61
7161	10725	2.932614	GACAGTACTAGCATGCAAGGTG	59.067	50.000	21.98	11.41	0.00	4.00
7162	10726	2.567169	TGACAGTACTAGCATGCAAGGT	59.433	45.455	21.98	16.66	0.00	3.50
7163	10727	3.251479	TGACAGTACTAGCATGCAAGG	57.749	47.619	21.98	11.51	0.00	3.61
7165	10729	4.470334	TCATGACAGTACTAGCATGCAA	57.530	40.909	21.98	11.06	38.34	4.08
7167	10731	4.437239	ACTTCATGACAGTACTAGCATGC	58.563	43.478	22.78	10.51	38.34	4.06
7176	10740	9.814899	GTAGTCTACTAGTACTTCATGACAGTA	57.185	37.037	15.91	4.38	32.12	2.74
7177	10741	7.769970	GGTAGTCTACTAGTACTTCATGACAGT	59.230	40.741	15.91	12.93	34.81	3.55
7179	10743	7.052873	GGGTAGTCTACTAGTACTTCATGACA	58.947	42.308	15.91	4.29	34.81	3.58
7180	10744	7.052873	TGGGTAGTCTACTAGTACTTCATGAC	58.947	42.308	0.00	6.61	34.81	3.06
7182	10746	7.876936	TTGGGTAGTCTACTAGTACTTCATG	57.123	40.000	0.00	0.00	34.81	3.07
7184	10748	8.111545	TCATTTGGGTAGTCTACTAGTACTTCA	58.888	37.037	0.00	0.00	34.81	3.02
7185	10749	8.404765	GTCATTTGGGTAGTCTACTAGTACTTC	58.595	40.741	0.00	0.00	34.81	3.01
7186	10750	8.114743	AGTCATTTGGGTAGTCTACTAGTACTT	58.885	37.037	0.00	0.00	34.81	2.24
7187	10751	7.641249	AGTCATTTGGGTAGTCTACTAGTACT	58.359	38.462	9.85	0.00	34.81	2.73
7189	10753	9.570468	CATAGTCATTTGGGTAGTCTACTAGTA	57.430	37.037	9.85	1.89	0.00	1.82
7190	10754	8.280084	TCATAGTCATTTGGGTAGTCTACTAGT	58.720	37.037	9.85	0.00	0.00	2.57
7191	10755	8.693120	TCATAGTCATTTGGGTAGTCTACTAG	57.307	38.462	9.85	0.00	0.00	2.57
7193	10757	9.830186	ATATCATAGTCATTTGGGTAGTCTACT	57.170	33.333	9.85	0.00	0.00	2.57

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.