Multiple sequence alignment - TraesCS5D01G136800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G136800 chr5D 100.000 4888 0 0 1 4888 217420449 217425336 0.000000e+00 9027.0
1 TraesCS5D01G136800 chr5D 79.733 449 63 21 4458 4888 362603049 362602611 2.860000e-77 300.0
2 TraesCS5D01G136800 chr5D 88.444 225 22 4 1 223 397612924 397613146 8.060000e-68 268.0
3 TraesCS5D01G136800 chr5A 92.864 2929 149 27 211 3120 290112522 290115409 0.000000e+00 4196.0
4 TraesCS5D01G136800 chr5A 93.078 1098 62 9 3129 4220 290115535 290116624 0.000000e+00 1594.0
5 TraesCS5D01G136800 chr5A 94.400 250 13 1 4212 4460 290129468 290129717 2.760000e-102 383.0
6 TraesCS5D01G136800 chr5A 85.714 63 8 1 3452 3513 632570590 632570528 1.140000e-06 65.8
7 TraesCS5D01G136800 chr5B 94.485 1632 68 11 2836 4460 233453616 233455232 0.000000e+00 2495.0
8 TraesCS5D01G136800 chr5B 94.046 1142 58 5 303 1443 233445726 233446858 0.000000e+00 1724.0
9 TraesCS5D01G136800 chr5B 93.979 764 36 6 1505 2262 233447073 233447832 0.000000e+00 1147.0
10 TraesCS5D01G136800 chr5B 95.833 312 12 1 2253 2563 233447851 233448162 2.030000e-138 503.0
11 TraesCS5D01G136800 chr5B 90.785 293 23 4 2557 2848 233448211 233448500 5.930000e-104 388.0
12 TraesCS5D01G136800 chr7D 81.839 446 54 18 4463 4888 84182274 84182712 2.800000e-92 350.0
13 TraesCS5D01G136800 chr4A 81.839 435 58 15 4459 4888 207395224 207395642 3.620000e-91 346.0
14 TraesCS5D01G136800 chr4A 87.692 65 7 1 3439 3503 668373950 668374013 1.890000e-09 75.0
15 TraesCS5D01G136800 chr1A 91.964 224 18 0 1 224 153268390 153268613 1.020000e-81 315.0
16 TraesCS5D01G136800 chr1A 91.111 225 20 0 1 225 153333432 153333208 6.150000e-79 305.0
17 TraesCS5D01G136800 chr6B 90.541 222 21 0 3 224 182140964 182141185 1.330000e-75 294.0
18 TraesCS5D01G136800 chr6B 78.507 442 56 25 4476 4888 505908357 505907926 2.260000e-63 254.0
19 TraesCS5D01G136800 chr7B 89.381 226 18 4 1 224 662010631 662010410 3.730000e-71 279.0
20 TraesCS5D01G136800 chr6D 88.546 227 20 6 1 224 99798763 99798986 2.240000e-68 270.0
21 TraesCS5D01G136800 chr6A 88.496 226 22 4 1 224 88272049 88272272 2.240000e-68 270.0
22 TraesCS5D01G136800 chrUn 87.665 227 24 4 1 225 65963106 65963330 1.350000e-65 261.0
23 TraesCS5D01G136800 chrUn 87.611 226 24 4 1 224 155018165 155017942 4.850000e-65 259.0
24 TraesCS5D01G136800 chr2D 80.567 247 22 16 4664 4888 645769185 645769427 3.030000e-37 167.0
25 TraesCS5D01G136800 chr2D 86.170 94 10 3 4364 4454 101367106 101367199 1.120000e-16 99.0
26 TraesCS5D01G136800 chr2D 100.000 43 0 0 3418 3460 643771612 643771654 4.060000e-11 80.5
27 TraesCS5D01G136800 chr2A 92.500 80 5 1 4381 4460 17927878 17927956 4.000000e-21 113.0
28 TraesCS5D01G136800 chr3B 91.139 79 7 0 4381 4459 414823815 414823737 1.860000e-19 108.0
29 TraesCS5D01G136800 chr2B 92.000 75 4 2 4381 4454 28266565 28266638 2.410000e-18 104.0
30 TraesCS5D01G136800 chr2B 100.000 43 0 0 3418 3460 793350011 793349969 4.060000e-11 80.5
31 TraesCS5D01G136800 chr4B 88.750 80 8 1 4381 4459 28665458 28665537 4.030000e-16 97.1
32 TraesCS5D01G136800 chr4B 87.654 81 9 1 4381 4461 36173565 36173486 5.210000e-15 93.5
33 TraesCS5D01G136800 chr4B 97.959 49 1 0 3913 3961 1183143 1183191 8.720000e-13 86.1
34 TraesCS5D01G136800 chr4B 85.246 61 8 1 3418 3477 559656344 559656404 1.470000e-05 62.1
35 TraesCS5D01G136800 chr7A 87.805 82 8 1 4381 4460 553372602 553372521 1.450000e-15 95.3
36 TraesCS5D01G136800 chr1D 84.615 65 9 1 3446 3509 450104408 450104472 4.080000e-06 63.9
37 TraesCS5D01G136800 chr3A 92.857 42 3 0 3462 3503 7827092 7827051 1.470000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G136800 chr5D 217420449 217425336 4887 False 9027.0 9027 100.00000 1 4888 1 chr5D.!!$F1 4887
1 TraesCS5D01G136800 chr5A 290112522 290116624 4102 False 2895.0 4196 92.97100 211 4220 2 chr5A.!!$F2 4009
2 TraesCS5D01G136800 chr5B 233453616 233455232 1616 False 2495.0 2495 94.48500 2836 4460 1 chr5B.!!$F1 1624
3 TraesCS5D01G136800 chr5B 233445726 233448500 2774 False 940.5 1724 93.66075 303 2848 4 chr5B.!!$F2 2545

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
339 340 0.182537 AGTGCTTTGTGCCTGGTGTA 59.817 50.0 0.00 0.00 42.00 2.90 F
1324 1337 0.114954 TTGGAGGCATTTTCAGGGCT 59.885 50.0 0.00 0.00 43.26 5.19 F
1574 1750 0.318360 TCTACCTTGTCACACGCACG 60.318 55.0 0.00 0.00 0.00 5.34 F
1669 1845 0.738975 TGGTCGCCAAGAGTCGATAG 59.261 55.0 0.00 0.00 37.06 2.08 F
2833 3100 0.179073 CTATGCTGTACGGCTTGGCT 60.179 55.0 26.36 9.32 0.00 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1905 2082 0.386605 TGCCAGCGCATAAACAAACG 60.387 50.0 11.47 0.00 41.12 3.60 R
2579 2844 0.108585 GGGAGACACTGCACCAGAAA 59.891 55.0 0.00 0.00 35.18 2.52 R
2583 2848 0.250858 CAATGGGAGACACTGCACCA 60.251 55.0 0.00 0.00 35.39 4.17 R
3633 4026 0.602905 AGAAGAAACCCGCGACAAGG 60.603 55.0 8.23 1.61 0.00 3.61 R
4435 4833 0.106619 TAAAAGGTGCCACAACCGGT 60.107 50.0 0.00 0.00 45.53 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 9.935241 ATTACATACAAACAAAATTATGGTGCA 57.065 25.926 0.00 0.00 0.00 4.57
75 76 9.764363 TTACATACAAACAAAATTATGGTGCAA 57.236 25.926 0.00 0.00 0.00 4.08
76 77 8.845413 ACATACAAACAAAATTATGGTGCAAT 57.155 26.923 0.00 0.00 0.00 3.56
77 78 9.935241 ACATACAAACAAAATTATGGTGCAATA 57.065 25.926 0.00 0.00 0.00 1.90
93 94 9.675464 ATGGTGCAATAAAATCAATTTCAGATT 57.325 25.926 0.00 0.00 37.30 2.40
94 95 9.504708 TGGTGCAATAAAATCAATTTCAGATTT 57.495 25.926 0.00 0.00 45.01 2.17
121 122 9.778741 ATTTTCTATGAACAGTGACTTTCTACA 57.221 29.630 0.00 0.00 0.00 2.74
122 123 8.818141 TTTCTATGAACAGTGACTTTCTACAG 57.182 34.615 0.00 4.50 0.00 2.74
123 124 7.526142 TCTATGAACAGTGACTTTCTACAGT 57.474 36.000 0.00 0.00 0.00 3.55
124 125 8.631480 TCTATGAACAGTGACTTTCTACAGTA 57.369 34.615 0.00 0.00 0.00 2.74
125 126 8.512956 TCTATGAACAGTGACTTTCTACAGTAC 58.487 37.037 0.00 0.00 0.00 2.73
126 127 6.459670 TGAACAGTGACTTTCTACAGTACA 57.540 37.500 0.00 0.00 0.00 2.90
127 128 7.050970 TGAACAGTGACTTTCTACAGTACAT 57.949 36.000 0.00 0.00 0.00 2.29
128 129 8.173542 TGAACAGTGACTTTCTACAGTACATA 57.826 34.615 0.00 0.00 0.00 2.29
129 130 8.803235 TGAACAGTGACTTTCTACAGTACATAT 58.197 33.333 0.00 0.00 0.00 1.78
130 131 9.291664 GAACAGTGACTTTCTACAGTACATATC 57.708 37.037 0.00 0.00 0.00 1.63
131 132 7.473366 ACAGTGACTTTCTACAGTACATATCG 58.527 38.462 0.00 0.00 0.00 2.92
132 133 6.415280 CAGTGACTTTCTACAGTACATATCGC 59.585 42.308 0.00 0.00 0.00 4.58
133 134 6.319152 AGTGACTTTCTACAGTACATATCGCT 59.681 38.462 0.00 0.00 0.00 4.93
134 135 7.498239 AGTGACTTTCTACAGTACATATCGCTA 59.502 37.037 0.00 0.00 0.00 4.26
135 136 7.587028 GTGACTTTCTACAGTACATATCGCTAC 59.413 40.741 0.00 0.00 0.00 3.58
136 137 7.281549 TGACTTTCTACAGTACATATCGCTACA 59.718 37.037 0.00 0.00 0.00 2.74
137 138 7.640852 ACTTTCTACAGTACATATCGCTACAG 58.359 38.462 0.00 0.00 0.00 2.74
138 139 7.282675 ACTTTCTACAGTACATATCGCTACAGT 59.717 37.037 0.00 0.00 0.00 3.55
139 140 8.667076 TTTCTACAGTACATATCGCTACAGTA 57.333 34.615 0.00 0.00 0.00 2.74
140 141 7.886405 TCTACAGTACATATCGCTACAGTAG 57.114 40.000 2.85 2.85 35.68 2.57
150 151 1.841450 GCTACAGTAGCCGTGTCATC 58.159 55.000 20.53 0.00 45.95 2.92
151 152 1.536284 GCTACAGTAGCCGTGTCATCC 60.536 57.143 20.53 0.00 45.95 3.51
152 153 1.067212 CTACAGTAGCCGTGTCATCCC 59.933 57.143 0.00 0.00 0.00 3.85
153 154 0.614979 ACAGTAGCCGTGTCATCCCT 60.615 55.000 0.00 0.00 0.00 4.20
154 155 0.537188 CAGTAGCCGTGTCATCCCTT 59.463 55.000 0.00 0.00 0.00 3.95
155 156 0.824759 AGTAGCCGTGTCATCCCTTC 59.175 55.000 0.00 0.00 0.00 3.46
156 157 0.824759 GTAGCCGTGTCATCCCTTCT 59.175 55.000 0.00 0.00 0.00 2.85
157 158 1.112113 TAGCCGTGTCATCCCTTCTC 58.888 55.000 0.00 0.00 0.00 2.87
158 159 0.616111 AGCCGTGTCATCCCTTCTCT 60.616 55.000 0.00 0.00 0.00 3.10
159 160 1.112113 GCCGTGTCATCCCTTCTCTA 58.888 55.000 0.00 0.00 0.00 2.43
160 161 1.689273 GCCGTGTCATCCCTTCTCTAT 59.311 52.381 0.00 0.00 0.00 1.98
161 162 2.103263 GCCGTGTCATCCCTTCTCTATT 59.897 50.000 0.00 0.00 0.00 1.73
162 163 3.432326 GCCGTGTCATCCCTTCTCTATTT 60.432 47.826 0.00 0.00 0.00 1.40
163 164 4.770795 CCGTGTCATCCCTTCTCTATTTT 58.229 43.478 0.00 0.00 0.00 1.82
164 165 4.572389 CCGTGTCATCCCTTCTCTATTTTG 59.428 45.833 0.00 0.00 0.00 2.44
165 166 4.034510 CGTGTCATCCCTTCTCTATTTTGC 59.965 45.833 0.00 0.00 0.00 3.68
166 167 4.943705 GTGTCATCCCTTCTCTATTTTGCA 59.056 41.667 0.00 0.00 0.00 4.08
167 168 4.943705 TGTCATCCCTTCTCTATTTTGCAC 59.056 41.667 0.00 0.00 0.00 4.57
168 169 5.189180 GTCATCCCTTCTCTATTTTGCACT 58.811 41.667 0.00 0.00 0.00 4.40
169 170 5.065731 GTCATCCCTTCTCTATTTTGCACTG 59.934 44.000 0.00 0.00 0.00 3.66
170 171 3.955471 TCCCTTCTCTATTTTGCACTGG 58.045 45.455 0.00 0.00 0.00 4.00
171 172 3.587061 TCCCTTCTCTATTTTGCACTGGA 59.413 43.478 0.00 0.00 0.00 3.86
172 173 4.228210 TCCCTTCTCTATTTTGCACTGGAT 59.772 41.667 0.00 0.00 0.00 3.41
173 174 4.952335 CCCTTCTCTATTTTGCACTGGATT 59.048 41.667 0.00 0.00 0.00 3.01
174 175 5.420104 CCCTTCTCTATTTTGCACTGGATTT 59.580 40.000 0.00 0.00 0.00 2.17
175 176 6.327934 CCTTCTCTATTTTGCACTGGATTTG 58.672 40.000 0.00 0.00 0.00 2.32
176 177 6.071728 CCTTCTCTATTTTGCACTGGATTTGT 60.072 38.462 0.00 0.00 0.00 2.83
177 178 7.121168 CCTTCTCTATTTTGCACTGGATTTGTA 59.879 37.037 0.00 0.00 0.00 2.41
178 179 7.377766 TCTCTATTTTGCACTGGATTTGTAC 57.622 36.000 0.00 0.00 0.00 2.90
179 180 7.168219 TCTCTATTTTGCACTGGATTTGTACT 58.832 34.615 0.00 0.00 0.00 2.73
180 181 7.119699 TCTCTATTTTGCACTGGATTTGTACTG 59.880 37.037 0.00 0.00 0.00 2.74
181 182 5.789643 ATTTTGCACTGGATTTGTACTGT 57.210 34.783 0.00 0.00 0.00 3.55
182 183 6.892658 ATTTTGCACTGGATTTGTACTGTA 57.107 33.333 0.00 0.00 0.00 2.74
183 184 5.940192 TTTGCACTGGATTTGTACTGTAG 57.060 39.130 0.00 0.00 0.00 2.74
184 185 3.334691 TGCACTGGATTTGTACTGTAGC 58.665 45.455 0.00 0.00 0.00 3.58
185 186 3.007940 TGCACTGGATTTGTACTGTAGCT 59.992 43.478 0.00 0.00 0.00 3.32
186 187 4.003648 GCACTGGATTTGTACTGTAGCTT 58.996 43.478 0.00 0.00 0.00 3.74
187 188 4.093556 GCACTGGATTTGTACTGTAGCTTC 59.906 45.833 0.00 0.00 0.00 3.86
188 189 5.237815 CACTGGATTTGTACTGTAGCTTCA 58.762 41.667 0.00 0.00 0.00 3.02
189 190 5.877012 CACTGGATTTGTACTGTAGCTTCAT 59.123 40.000 0.00 0.00 0.00 2.57
190 191 5.877012 ACTGGATTTGTACTGTAGCTTCATG 59.123 40.000 0.00 0.00 0.00 3.07
191 192 6.048732 TGGATTTGTACTGTAGCTTCATGA 57.951 37.500 0.00 0.00 0.00 3.07
192 193 5.874810 TGGATTTGTACTGTAGCTTCATGAC 59.125 40.000 0.00 0.00 0.00 3.06
193 194 5.874810 GGATTTGTACTGTAGCTTCATGACA 59.125 40.000 0.00 0.00 0.00 3.58
194 195 6.540189 GGATTTGTACTGTAGCTTCATGACAT 59.460 38.462 0.00 0.00 0.00 3.06
195 196 6.968131 TTTGTACTGTAGCTTCATGACATC 57.032 37.500 0.00 0.00 0.00 3.06
196 197 5.011090 TGTACTGTAGCTTCATGACATCC 57.989 43.478 0.00 0.00 0.00 3.51
197 198 3.550437 ACTGTAGCTTCATGACATCCC 57.450 47.619 0.00 0.00 0.00 3.85
198 199 3.110705 ACTGTAGCTTCATGACATCCCT 58.889 45.455 0.00 0.00 0.00 4.20
199 200 3.521126 ACTGTAGCTTCATGACATCCCTT 59.479 43.478 0.00 0.00 0.00 3.95
200 201 4.125703 CTGTAGCTTCATGACATCCCTTC 58.874 47.826 0.00 0.00 0.00 3.46
201 202 3.776969 TGTAGCTTCATGACATCCCTTCT 59.223 43.478 0.00 0.00 0.00 2.85
202 203 4.225942 TGTAGCTTCATGACATCCCTTCTT 59.774 41.667 0.00 0.00 0.00 2.52
203 204 5.425217 TGTAGCTTCATGACATCCCTTCTTA 59.575 40.000 0.00 0.00 0.00 2.10
204 205 5.441718 AGCTTCATGACATCCCTTCTTAA 57.558 39.130 0.00 0.00 0.00 1.85
205 206 6.011122 AGCTTCATGACATCCCTTCTTAAT 57.989 37.500 0.00 0.00 0.00 1.40
206 207 5.826737 AGCTTCATGACATCCCTTCTTAATG 59.173 40.000 0.00 0.00 0.00 1.90
207 208 5.591877 GCTTCATGACATCCCTTCTTAATGT 59.408 40.000 0.00 0.00 36.37 2.71
208 209 6.096001 GCTTCATGACATCCCTTCTTAATGTT 59.904 38.462 0.00 0.00 33.91 2.71
209 210 7.283127 GCTTCATGACATCCCTTCTTAATGTTA 59.717 37.037 0.00 0.00 33.91 2.41
218 219 5.304614 TCCCTTCTTAATGTTAGAGGATCCG 59.695 44.000 5.98 0.00 33.66 4.18
219 220 5.070580 CCCTTCTTAATGTTAGAGGATCCGT 59.929 44.000 5.98 0.00 33.66 4.69
220 221 6.408206 CCCTTCTTAATGTTAGAGGATCCGTT 60.408 42.308 5.98 0.79 33.66 4.44
223 224 3.840124 AATGTTAGAGGATCCGTTCCC 57.160 47.619 5.98 0.00 46.81 3.97
224 225 1.492764 TGTTAGAGGATCCGTTCCCC 58.507 55.000 5.98 0.00 46.81 4.81
229 230 1.061657 AGAGGATCCGTTCCCCCATAA 60.062 52.381 5.98 0.00 46.81 1.90
231 232 2.375509 GAGGATCCGTTCCCCCATAAAT 59.624 50.000 5.98 0.00 46.81 1.40
245 246 4.162131 CCCCATAAATTGGTCCCTTTCAAG 59.838 45.833 0.00 0.00 44.83 3.02
246 247 5.022787 CCCATAAATTGGTCCCTTTCAAGA 58.977 41.667 0.00 0.00 44.83 3.02
252 253 6.745794 AATTGGTCCCTTTCAAGATTCAAA 57.254 33.333 0.00 0.00 0.00 2.69
253 254 6.745794 ATTGGTCCCTTTCAAGATTCAAAA 57.254 33.333 0.00 0.00 0.00 2.44
266 267 4.589908 AGATTCAAAATGGTACTTCCGCT 58.410 39.130 0.00 0.00 39.52 5.52
273 274 5.372547 AAATGGTACTTCCGCTTTCTTTC 57.627 39.130 0.00 0.00 39.52 2.62
276 277 1.730612 GTACTTCCGCTTTCTTTCGGG 59.269 52.381 0.64 0.00 45.31 5.14
282 283 1.617740 CGCTTTCTTTCGGGATTTGC 58.382 50.000 0.00 0.00 0.00 3.68
313 314 1.022451 TTTCCACTATGGTTCCGCGC 61.022 55.000 0.00 0.00 39.03 6.86
339 340 0.182537 AGTGCTTTGTGCCTGGTGTA 59.817 50.000 0.00 0.00 42.00 2.90
340 341 0.310854 GTGCTTTGTGCCTGGTGTAC 59.689 55.000 0.00 0.00 42.00 2.90
416 417 7.627088 GCATGCTTGTGCTTATTCTAGAAGAAA 60.627 37.037 11.37 8.13 41.82 2.52
534 536 2.969238 CGGCGCCATGGCTTAGAG 60.969 66.667 33.07 18.80 42.02 2.43
564 566 2.283388 CATGGCAGCCACCACCTT 60.283 61.111 19.10 0.00 44.17 3.50
576 578 1.599797 CCACCTTCGGTTCACCACC 60.600 63.158 0.00 0.00 43.16 4.61
731 733 0.465460 AAGCGAAGAACAGTGGCCAA 60.465 50.000 7.24 0.00 0.00 4.52
785 787 4.822036 ACAGAGAGAGATATTTCCGACG 57.178 45.455 0.00 0.00 0.00 5.12
1233 1246 0.399806 GCTCCATCCCCTCTCTCCTT 60.400 60.000 0.00 0.00 0.00 3.36
1234 1247 1.715785 CTCCATCCCCTCTCTCCTTC 58.284 60.000 0.00 0.00 0.00 3.46
1235 1248 0.266152 TCCATCCCCTCTCTCCTTCC 59.734 60.000 0.00 0.00 0.00 3.46
1236 1249 0.267356 CCATCCCCTCTCTCCTTCCT 59.733 60.000 0.00 0.00 0.00 3.36
1239 1252 3.633690 CCATCCCCTCTCTCCTTCCTTAA 60.634 52.174 0.00 0.00 0.00 1.85
1278 1291 6.607004 TGGTTGTTTTTCCCTTGAGTTTTA 57.393 33.333 0.00 0.00 0.00 1.52
1288 1301 3.366985 CCCTTGAGTTTTAATCGTTGGGC 60.367 47.826 0.00 0.00 0.00 5.36
1291 1304 2.227865 TGAGTTTTAATCGTTGGGCTGC 59.772 45.455 0.00 0.00 0.00 5.25
1293 1306 1.068816 GTTTTAATCGTTGGGCTGCGT 60.069 47.619 0.00 0.00 0.00 5.24
1324 1337 0.114954 TTGGAGGCATTTTCAGGGCT 59.885 50.000 0.00 0.00 43.26 5.19
1393 1406 3.222855 CTCCTCATCCTCGCCGCT 61.223 66.667 0.00 0.00 0.00 5.52
1428 1441 2.964464 TCCCTTACAGTAACCACACGAA 59.036 45.455 0.00 0.00 0.00 3.85
1449 1622 7.959651 CACGAATCATTTCTCTTCCTGTTTTAG 59.040 37.037 0.00 0.00 0.00 1.85
1488 1664 3.863424 GCATCAACAATCAGCCTTTCATG 59.137 43.478 0.00 0.00 0.00 3.07
1496 1672 5.948162 ACAATCAGCCTTTCATGACTATTGT 59.052 36.000 0.00 4.51 0.00 2.71
1550 1726 4.250305 AGCACCAAGGTCGCCGTT 62.250 61.111 9.14 0.00 0.00 4.44
1574 1750 0.318360 TCTACCTTGTCACACGCACG 60.318 55.000 0.00 0.00 0.00 5.34
1650 1826 4.194720 GTGCTCGACGGCGATCCT 62.195 66.667 16.81 0.00 46.80 3.24
1667 1843 1.513158 CTGGTCGCCAAGAGTCGAT 59.487 57.895 0.00 0.00 37.06 3.59
1669 1845 0.738975 TGGTCGCCAAGAGTCGATAG 59.261 55.000 0.00 0.00 37.06 2.08
1805 1982 2.032681 AGGTTTCTGCCCGAGCAC 59.967 61.111 0.00 0.00 46.52 4.40
1833 2010 5.971895 TTTTCAGGTACGTTGTCAACTAC 57.028 39.130 13.67 13.24 0.00 2.73
1834 2011 4.924305 TTCAGGTACGTTGTCAACTACT 57.076 40.909 13.67 3.82 0.00 2.57
1835 2012 6.389830 TTTCAGGTACGTTGTCAACTACTA 57.610 37.500 13.67 0.00 0.00 1.82
1860 2037 0.950555 AACTTGCTGCGCTTCATCGA 60.951 50.000 9.73 0.00 0.00 3.59
1879 2056 0.877071 ACATCTGTTTGCTGGCTTCG 59.123 50.000 0.00 0.00 0.00 3.79
1898 2075 6.237463 GGCTTCGTTTTCAGTTTTACAAACTG 60.237 38.462 19.17 19.17 46.67 3.16
1900 2077 7.482428 GCTTCGTTTTCAGTTTTACAAACTGTA 59.518 33.333 22.58 14.35 45.75 2.74
1905 2082 9.069078 GTTTTCAGTTTTACAAACTGTAGAACC 57.931 33.333 22.58 10.07 44.33 3.62
1919 2096 2.325509 AGAACCGTTTGTTTATGCGC 57.674 45.000 0.00 0.00 37.29 6.09
1979 2156 5.582665 GGTCTACATGAAGATTTGTCTGGTC 59.417 44.000 0.00 0.00 0.00 4.02
2246 2427 7.136119 CGCTAATGTTTTCAAGTAGGAAACAA 58.864 34.615 5.86 0.00 36.56 2.83
2277 2487 4.771590 TGTGATGCAATTTCTGACCTTC 57.228 40.909 0.00 0.00 0.00 3.46
2400 2610 6.472808 GGTAATCATACGTCTCAGTTCTGTTC 59.527 42.308 0.00 0.00 32.51 3.18
2411 2621 7.331440 CGTCTCAGTTCTGTTCTACTCTACTAA 59.669 40.741 0.00 0.00 0.00 2.24
2425 2635 6.356186 ACTCTACTAAGGTGTTCCGAAAAT 57.644 37.500 0.00 0.00 39.05 1.82
2427 2637 6.872547 ACTCTACTAAGGTGTTCCGAAAATTC 59.127 38.462 0.00 0.00 39.05 2.17
2433 2643 0.878416 TGTTCCGAAAATTCAGGCCG 59.122 50.000 0.00 0.00 0.00 6.13
2434 2644 0.879090 GTTCCGAAAATTCAGGCCGT 59.121 50.000 0.00 0.00 0.00 5.68
2583 2848 4.929807 CCACAAGGTGCCCTTTCT 57.070 55.556 3.93 0.00 41.69 2.52
2590 2855 2.270986 GGTGCCCTTTCTGGTGCAG 61.271 63.158 0.00 0.00 40.77 4.41
2593 2858 1.529244 GCCCTTTCTGGTGCAGTGT 60.529 57.895 0.00 0.00 33.85 3.55
2594 2859 1.518903 GCCCTTTCTGGTGCAGTGTC 61.519 60.000 0.00 0.00 33.85 3.67
2737 3004 5.048713 GGTTGCTTATGTGAGTATTATGCCC 60.049 44.000 0.00 0.00 0.00 5.36
2739 3006 5.879763 TGCTTATGTGAGTATTATGCCCAT 58.120 37.500 0.00 0.00 0.00 4.00
2783 3050 4.549871 GCTGTTGCGGTGTTACAAAATTTG 60.550 41.667 3.89 3.89 0.00 2.32
2833 3100 0.179073 CTATGCTGTACGGCTTGGCT 60.179 55.000 26.36 9.32 0.00 4.75
2849 3116 0.331616 GGCTTGGAGTTGGTGGGTAT 59.668 55.000 0.00 0.00 0.00 2.73
3014 3281 0.605589 GGTCAAGCCGGCTGTAAGTT 60.606 55.000 33.60 10.70 35.30 2.66
3087 3356 6.430925 ACTTTGCAGCAGTTAATTCAGTGATA 59.569 34.615 0.00 0.00 0.00 2.15
3092 3361 6.674037 GCAGCAGTTAATTCAGTGATAGTGTG 60.674 42.308 0.00 0.00 0.00 3.82
3223 3615 6.828785 AGCTGACCAGGTATATTTAAACCAAG 59.171 38.462 0.00 0.00 38.30 3.61
3289 3681 3.171528 ACCGCCTAGTTTTCCTCTACTT 58.828 45.455 0.00 0.00 0.00 2.24
3290 3682 4.347607 ACCGCCTAGTTTTCCTCTACTTA 58.652 43.478 0.00 0.00 0.00 2.24
3304 3696 5.425217 TCCTCTACTTATGATGGCTTTGACA 59.575 40.000 0.00 0.00 0.00 3.58
3402 3794 2.171448 CCTCTAACCTGTAAGCCAGCAT 59.829 50.000 0.00 0.00 40.06 3.79
3409 3801 3.519510 ACCTGTAAGCCAGCATTTCTCTA 59.480 43.478 0.00 0.00 40.06 2.43
3416 3808 3.455910 AGCCAGCATTTCTCTACCATGTA 59.544 43.478 0.00 0.00 0.00 2.29
3597 3990 3.017442 GGTTCCAGCCTACTTCATTTCC 58.983 50.000 0.00 0.00 0.00 3.13
3633 4026 4.743493 TCAACTGCAAAGGTTTCAGTTTC 58.257 39.130 13.20 0.00 45.55 2.78
3652 4045 0.602905 CCTTGTCGCGGGTTTCTTCT 60.603 55.000 6.13 0.00 0.00 2.85
3678 4071 6.110033 GGTCAGTCCTATTCCTCTTTTCTTC 58.890 44.000 0.00 0.00 0.00 2.87
3686 4080 9.945904 TCCTATTCCTCTTTTCTTCTAGAAAAC 57.054 33.333 6.63 0.00 45.99 2.43
3699 4093 5.995565 TCTAGAAAACGATTCCTCTTCCA 57.004 39.130 0.00 0.00 0.00 3.53
3706 4100 2.840651 ACGATTCCTCTTCCACTTGGAT 59.159 45.455 0.00 0.00 44.98 3.41
3707 4101 4.030913 ACGATTCCTCTTCCACTTGGATA 58.969 43.478 0.00 0.00 44.98 2.59
3709 4103 4.100189 CGATTCCTCTTCCACTTGGATAGT 59.900 45.833 0.00 0.00 44.98 2.12
3712 4106 7.472100 CGATTCCTCTTCCACTTGGATAGTATT 60.472 40.741 0.00 0.00 44.98 1.89
3773 4167 6.699575 ACAACATTTCTACAGGCAATATCC 57.300 37.500 0.00 0.00 0.00 2.59
3955 4349 5.115480 GCTTCAGCTGATAACTAGAGCTTT 58.885 41.667 19.04 0.00 41.19 3.51
4019 4417 0.620556 CCTGCCTGCCTCTTCCTTAA 59.379 55.000 0.00 0.00 0.00 1.85
4028 4426 2.103432 GCCTCTTCCTTAACCCTAGCTC 59.897 54.545 0.00 0.00 0.00 4.09
4038 4436 1.880941 ACCCTAGCTCCTTACCCTTG 58.119 55.000 0.00 0.00 0.00 3.61
4039 4437 0.470341 CCCTAGCTCCTTACCCTTGC 59.530 60.000 0.00 0.00 0.00 4.01
4049 4447 0.479378 TTACCCTTGCCGGTTTTCCT 59.521 50.000 1.90 0.00 37.34 3.36
4050 4448 1.360185 TACCCTTGCCGGTTTTCCTA 58.640 50.000 1.90 0.00 37.34 2.94
4051 4449 0.037734 ACCCTTGCCGGTTTTCCTAG 59.962 55.000 1.90 0.00 37.95 3.02
4052 4450 0.037734 CCCTTGCCGGTTTTCCTAGT 59.962 55.000 1.90 0.00 37.95 2.57
4120 4518 0.179056 TGGTTGCCGGCTAGCTATTC 60.179 55.000 33.59 12.69 0.00 1.75
4161 4559 2.304751 TTACTACGCCTTAGCTTGGC 57.695 50.000 17.40 17.40 46.42 4.52
4300 4698 4.497473 GCAATGTGCAACTAGTGGTTAA 57.503 40.909 0.00 0.00 44.26 2.01
4347 4745 2.032528 CGCTGGGGCAAGAGAACA 59.967 61.111 0.00 0.00 38.60 3.18
4355 4753 0.813821 GGCAAGAGAACAATGAGGCC 59.186 55.000 0.00 0.00 0.00 5.19
4391 4789 4.749099 TGAAAATTTCAAGTTTGGATGGCG 59.251 37.500 5.87 0.00 36.59 5.69
4392 4790 4.599047 AAATTTCAAGTTTGGATGGCGA 57.401 36.364 0.00 0.00 0.00 5.54
4394 4792 3.848272 TTTCAAGTTTGGATGGCGATC 57.152 42.857 0.00 0.00 0.00 3.69
4425 4823 6.472686 AGGCTAGGTGTTTAGTCATCTTAG 57.527 41.667 0.00 0.00 30.86 2.18
4449 4847 0.745468 TTTTTACCGGTTGTGGCACC 59.255 50.000 15.04 0.00 0.00 5.01
4460 4858 4.556233 GGTTGTGGCACCTTTTATCTTTC 58.444 43.478 16.26 0.00 33.50 2.62
4461 4859 4.226761 GTTGTGGCACCTTTTATCTTTCG 58.773 43.478 16.26 0.00 0.00 3.46
4462 4860 3.482436 TGTGGCACCTTTTATCTTTCGT 58.518 40.909 16.26 0.00 0.00 3.85
4463 4861 4.643463 TGTGGCACCTTTTATCTTTCGTA 58.357 39.130 16.26 0.00 0.00 3.43
4464 4862 5.064558 TGTGGCACCTTTTATCTTTCGTAA 58.935 37.500 16.26 0.00 0.00 3.18
4465 4863 5.531659 TGTGGCACCTTTTATCTTTCGTAAA 59.468 36.000 16.26 0.00 0.00 2.01
4466 4864 6.207810 TGTGGCACCTTTTATCTTTCGTAAAT 59.792 34.615 16.26 0.00 0.00 1.40
4467 4865 7.390996 TGTGGCACCTTTTATCTTTCGTAAATA 59.609 33.333 16.26 0.00 0.00 1.40
4468 4866 7.695201 GTGGCACCTTTTATCTTTCGTAAATAC 59.305 37.037 6.29 0.00 0.00 1.89
4469 4867 7.390996 TGGCACCTTTTATCTTTCGTAAATACA 59.609 33.333 0.00 0.00 0.00 2.29
4470 4868 8.403236 GGCACCTTTTATCTTTCGTAAATACAT 58.597 33.333 0.00 0.00 0.00 2.29
4471 4869 9.221775 GCACCTTTTATCTTTCGTAAATACATG 57.778 33.333 0.00 0.00 0.00 3.21
4478 4876 9.524106 TTATCTTTCGTAAATACATGATCGTGT 57.476 29.630 23.45 23.45 36.13 4.49
4479 4877 7.216920 TCTTTCGTAAATACATGATCGTGTG 57.783 36.000 27.30 11.79 33.62 3.82
4480 4878 5.383984 TTCGTAAATACATGATCGTGTGC 57.616 39.130 27.30 12.55 33.62 4.57
4481 4879 3.484285 TCGTAAATACATGATCGTGTGCG 59.516 43.478 27.30 21.06 39.92 5.34
4482 4880 3.242016 CGTAAATACATGATCGTGTGCGT 59.758 43.478 27.30 15.21 39.49 5.24
4483 4881 3.656651 AAATACATGATCGTGTGCGTG 57.343 42.857 27.30 0.00 39.49 5.34
4484 4882 2.293677 ATACATGATCGTGTGCGTGT 57.706 45.000 27.30 5.46 39.49 4.49
4485 4883 1.345410 TACATGATCGTGTGCGTGTG 58.655 50.000 27.30 0.00 39.49 3.82
4486 4884 1.225827 CATGATCGTGTGCGTGTGC 60.226 57.895 6.77 0.00 43.20 4.57
4487 4885 1.374631 ATGATCGTGTGCGTGTGCT 60.375 52.632 0.00 0.00 43.34 4.40
4488 4886 0.950555 ATGATCGTGTGCGTGTGCTT 60.951 50.000 0.00 0.00 43.34 3.91
4489 4887 1.154599 GATCGTGTGCGTGTGCTTG 60.155 57.895 0.00 0.00 43.34 4.01
4490 4888 3.240606 ATCGTGTGCGTGTGCTTGC 62.241 57.895 0.00 0.00 43.34 4.01
4491 4889 4.235025 CGTGTGCGTGTGCTTGCA 62.235 61.111 0.00 0.00 43.34 4.08
4492 4890 2.101965 GTGTGCGTGTGCTTGCAA 59.898 55.556 0.00 0.00 43.75 4.08
4493 4891 2.101965 TGTGCGTGTGCTTGCAAC 59.898 55.556 0.00 0.00 43.75 4.17
4494 4892 2.405805 TGTGCGTGTGCTTGCAACT 61.406 52.632 0.00 0.00 43.75 3.16
4495 4893 1.655350 GTGCGTGTGCTTGCAACTC 60.655 57.895 0.00 0.00 43.75 3.01
4496 4894 2.425773 GCGTGTGCTTGCAACTCG 60.426 61.111 0.00 0.57 38.39 4.18
4497 4895 2.425773 CGTGTGCTTGCAACTCGC 60.426 61.111 0.00 0.00 42.89 5.03
4498 4896 2.050985 GTGTGCTTGCAACTCGCC 60.051 61.111 6.69 0.07 41.33 5.54
4499 4897 2.203195 TGTGCTTGCAACTCGCCT 60.203 55.556 6.69 0.00 41.33 5.52
4500 4898 1.823470 TGTGCTTGCAACTCGCCTT 60.823 52.632 6.69 0.00 41.33 4.35
4501 4899 1.370900 GTGCTTGCAACTCGCCTTG 60.371 57.895 6.69 0.00 41.33 3.61
4502 4900 1.525765 TGCTTGCAACTCGCCTTGA 60.526 52.632 6.69 0.00 41.33 3.02
4526 4924 4.891727 GGCGTCGCACCATCCGAT 62.892 66.667 20.50 0.00 37.04 4.18
4527 4925 3.330853 GCGTCGCACCATCCGATC 61.331 66.667 13.44 0.00 37.04 3.69
4528 4926 3.024609 CGTCGCACCATCCGATCG 61.025 66.667 8.51 8.51 37.04 3.69
4529 4927 3.330853 GTCGCACCATCCGATCGC 61.331 66.667 10.32 0.00 37.04 4.58
4530 4928 4.923710 TCGCACCATCCGATCGCG 62.924 66.667 10.32 0.00 46.92 5.87
4532 4930 2.890474 GCACCATCCGATCGCGTT 60.890 61.111 10.32 0.00 35.23 4.84
4533 4931 3.005898 CACCATCCGATCGCGTTG 58.994 61.111 10.32 8.41 35.23 4.10
4534 4932 2.890474 ACCATCCGATCGCGTTGC 60.890 61.111 10.32 0.00 35.23 4.17
4535 4933 2.889988 CCATCCGATCGCGTTGCA 60.890 61.111 10.32 0.00 35.23 4.08
4536 4934 2.246739 CCATCCGATCGCGTTGCAT 61.247 57.895 10.32 0.00 35.23 3.96
4537 4935 1.202568 CATCCGATCGCGTTGCATC 59.797 57.895 10.32 0.00 35.23 3.91
4538 4936 2.302952 ATCCGATCGCGTTGCATCG 61.303 57.895 17.90 17.90 38.37 3.84
4539 4937 2.954020 ATCCGATCGCGTTGCATCGT 62.954 55.000 21.51 6.28 37.63 3.73
4540 4938 2.054840 CGATCGCGTTGCATCGTG 60.055 61.111 21.58 21.58 41.75 4.35
4541 4939 2.350091 GATCGCGTTGCATCGTGC 60.350 61.111 22.52 8.80 45.29 5.34
4571 4969 4.919653 CCAGGTGTCATCTGGTCG 57.080 61.111 22.34 0.00 44.97 4.79
4572 4970 1.219124 CCAGGTGTCATCTGGTCGG 59.781 63.158 22.34 0.00 44.97 4.79
4573 4971 1.544825 CCAGGTGTCATCTGGTCGGT 61.545 60.000 22.34 0.00 44.97 4.69
4574 4972 0.321671 CAGGTGTCATCTGGTCGGTT 59.678 55.000 5.07 0.00 0.00 4.44
4575 4973 1.056660 AGGTGTCATCTGGTCGGTTT 58.943 50.000 0.00 0.00 0.00 3.27
4576 4974 1.002087 AGGTGTCATCTGGTCGGTTTC 59.998 52.381 0.00 0.00 0.00 2.78
4577 4975 1.439679 GTGTCATCTGGTCGGTTTCC 58.560 55.000 0.00 0.00 0.00 3.13
4596 4994 3.561213 CACGCGCTGCATCTCCTG 61.561 66.667 5.73 0.00 0.00 3.86
4605 5003 4.631773 CATCTCCTGCACACCTGG 57.368 61.111 0.00 0.00 0.00 4.45
4606 5004 1.748122 CATCTCCTGCACACCTGGC 60.748 63.158 0.00 0.00 32.89 4.85
4607 5005 2.976490 ATCTCCTGCACACCTGGCC 61.976 63.158 0.00 0.00 32.89 5.36
4608 5006 4.729918 CTCCTGCACACCTGGCCC 62.730 72.222 0.00 0.00 32.89 5.80
4611 5009 4.415150 CTGCACACCTGGCCCGAT 62.415 66.667 0.00 0.00 0.00 4.18
4612 5010 3.925630 CTGCACACCTGGCCCGATT 62.926 63.158 0.00 0.00 0.00 3.34
4613 5011 3.443045 GCACACCTGGCCCGATTG 61.443 66.667 0.00 0.00 0.00 2.67
4614 5012 2.034066 CACACCTGGCCCGATTGT 59.966 61.111 0.00 0.00 0.00 2.71
4615 5013 2.034066 ACACCTGGCCCGATTGTG 59.966 61.111 0.00 2.83 0.00 3.33
4616 5014 3.443045 CACCTGGCCCGATTGTGC 61.443 66.667 0.00 0.00 0.00 4.57
4664 5062 4.431131 CCCGCCCTGCCATTGACT 62.431 66.667 0.00 0.00 0.00 3.41
4665 5063 3.136123 CCGCCCTGCCATTGACTG 61.136 66.667 0.00 0.00 0.00 3.51
4666 5064 3.818787 CGCCCTGCCATTGACTGC 61.819 66.667 0.00 0.00 0.00 4.40
4667 5065 3.818787 GCCCTGCCATTGACTGCG 61.819 66.667 0.00 0.00 0.00 5.18
4668 5066 2.360350 CCCTGCCATTGACTGCGT 60.360 61.111 0.00 0.00 0.00 5.24
4669 5067 1.078497 CCCTGCCATTGACTGCGTA 60.078 57.895 0.00 0.00 0.00 4.42
4670 5068 1.091771 CCCTGCCATTGACTGCGTAG 61.092 60.000 0.00 0.00 0.00 3.51
4671 5069 1.091771 CCTGCCATTGACTGCGTAGG 61.092 60.000 5.26 0.00 0.00 3.18
4672 5070 0.391661 CTGCCATTGACTGCGTAGGT 60.392 55.000 5.26 0.00 0.00 3.08
4673 5071 0.899019 TGCCATTGACTGCGTAGGTA 59.101 50.000 5.26 0.00 0.00 3.08
4674 5072 1.287425 GCCATTGACTGCGTAGGTAC 58.713 55.000 5.26 0.00 0.00 3.34
4684 5082 2.098293 CGTAGGTACGCCCGTTAGT 58.902 57.895 0.00 0.00 43.14 2.24
4685 5083 0.248215 CGTAGGTACGCCCGTTAGTG 60.248 60.000 0.00 0.00 43.14 2.74
4686 5084 1.094785 GTAGGTACGCCCGTTAGTGA 58.905 55.000 0.00 0.00 38.74 3.41
4687 5085 1.064654 GTAGGTACGCCCGTTAGTGAG 59.935 57.143 0.00 0.00 38.74 3.51
4688 5086 1.517913 GGTACGCCCGTTAGTGAGC 60.518 63.158 0.00 0.00 0.00 4.26
4691 5089 2.486504 CGCCCGTTAGTGAGCGTA 59.513 61.111 0.00 0.00 43.45 4.42
4692 5090 1.585521 CGCCCGTTAGTGAGCGTAG 60.586 63.158 0.00 0.00 43.45 3.51
4693 5091 1.805254 GCCCGTTAGTGAGCGTAGA 59.195 57.895 0.00 0.00 0.00 2.59
4694 5092 0.525029 GCCCGTTAGTGAGCGTAGAC 60.525 60.000 0.00 0.00 0.00 2.59
4695 5093 0.806868 CCCGTTAGTGAGCGTAGACA 59.193 55.000 0.00 0.00 0.00 3.41
4696 5094 1.200716 CCCGTTAGTGAGCGTAGACAA 59.799 52.381 0.00 0.00 0.00 3.18
4697 5095 2.516923 CCGTTAGTGAGCGTAGACAAG 58.483 52.381 0.00 0.00 0.00 3.16
4698 5096 2.095364 CCGTTAGTGAGCGTAGACAAGT 60.095 50.000 0.00 0.00 0.00 3.16
4699 5097 3.125829 CCGTTAGTGAGCGTAGACAAGTA 59.874 47.826 0.00 0.00 0.00 2.24
4700 5098 4.332788 CGTTAGTGAGCGTAGACAAGTAG 58.667 47.826 0.00 0.00 0.00 2.57
4701 5099 4.142945 CGTTAGTGAGCGTAGACAAGTAGT 60.143 45.833 0.00 0.00 0.00 2.73
4702 5100 3.833545 AGTGAGCGTAGACAAGTAGTG 57.166 47.619 0.00 0.00 0.00 2.74
4703 5101 2.488545 AGTGAGCGTAGACAAGTAGTGG 59.511 50.000 0.00 0.00 0.00 4.00
4704 5102 1.816835 TGAGCGTAGACAAGTAGTGGG 59.183 52.381 0.00 0.00 0.00 4.61
4705 5103 1.134560 GAGCGTAGACAAGTAGTGGGG 59.865 57.143 0.00 0.00 0.00 4.96
4706 5104 0.175073 GCGTAGACAAGTAGTGGGGG 59.825 60.000 0.00 0.00 0.00 5.40
4707 5105 0.175073 CGTAGACAAGTAGTGGGGGC 59.825 60.000 0.00 0.00 0.00 5.80
4708 5106 0.175073 GTAGACAAGTAGTGGGGGCG 59.825 60.000 0.00 0.00 0.00 6.13
4709 5107 0.974010 TAGACAAGTAGTGGGGGCGG 60.974 60.000 0.00 0.00 0.00 6.13
4710 5108 2.528378 ACAAGTAGTGGGGGCGGT 60.528 61.111 0.00 0.00 0.00 5.68
4711 5109 2.046314 CAAGTAGTGGGGGCGGTG 60.046 66.667 0.00 0.00 0.00 4.94
4712 5110 3.327404 AAGTAGTGGGGGCGGTGG 61.327 66.667 0.00 0.00 0.00 4.61
4723 5121 2.975799 GCGGTGGGCAGTTTCGAA 60.976 61.111 0.00 0.00 42.87 3.71
4724 5122 2.332654 GCGGTGGGCAGTTTCGAAT 61.333 57.895 0.00 0.00 42.87 3.34
4725 5123 1.862602 GCGGTGGGCAGTTTCGAATT 61.863 55.000 0.00 0.00 42.87 2.17
4726 5124 0.596082 CGGTGGGCAGTTTCGAATTT 59.404 50.000 0.00 0.00 0.00 1.82
4727 5125 1.401018 CGGTGGGCAGTTTCGAATTTC 60.401 52.381 0.00 0.00 0.00 2.17
4728 5126 1.401018 GGTGGGCAGTTTCGAATTTCG 60.401 52.381 12.54 12.54 42.10 3.46
4729 5127 1.265905 GTGGGCAGTTTCGAATTTCGT 59.734 47.619 17.61 0.00 41.35 3.85
4730 5128 1.265635 TGGGCAGTTTCGAATTTCGTG 59.734 47.619 17.61 10.12 41.35 4.35
4731 5129 1.327507 GGCAGTTTCGAATTTCGTGC 58.672 50.000 17.61 18.08 41.35 5.34
4732 5130 1.327507 GCAGTTTCGAATTTCGTGCC 58.672 50.000 17.61 7.31 41.35 5.01
4733 5131 1.334599 GCAGTTTCGAATTTCGTGCCA 60.335 47.619 17.61 0.00 41.35 4.92
4734 5132 2.307049 CAGTTTCGAATTTCGTGCCAC 58.693 47.619 17.61 10.36 41.35 5.01
4735 5133 2.032030 CAGTTTCGAATTTCGTGCCACT 60.032 45.455 17.61 12.12 41.35 4.00
4736 5134 2.616842 AGTTTCGAATTTCGTGCCACTT 59.383 40.909 17.61 0.00 41.35 3.16
4737 5135 2.961522 TTCGAATTTCGTGCCACTTC 57.038 45.000 17.61 0.00 41.35 3.01
4738 5136 1.153353 TCGAATTTCGTGCCACTTCC 58.847 50.000 17.61 0.00 41.35 3.46
4739 5137 1.156736 CGAATTTCGTGCCACTTCCT 58.843 50.000 10.61 0.00 34.72 3.36
4740 5138 1.128692 CGAATTTCGTGCCACTTCCTC 59.871 52.381 10.61 0.00 34.72 3.71
4741 5139 1.468914 GAATTTCGTGCCACTTCCTCC 59.531 52.381 0.00 0.00 0.00 4.30
4742 5140 0.322546 ATTTCGTGCCACTTCCTCCC 60.323 55.000 0.00 0.00 0.00 4.30
4743 5141 2.406002 TTTCGTGCCACTTCCTCCCC 62.406 60.000 0.00 0.00 0.00 4.81
4744 5142 4.410400 CGTGCCACTTCCTCCCCC 62.410 72.222 0.00 0.00 0.00 5.40
4760 5158 3.009115 CCCTCCACCACCCGTCAT 61.009 66.667 0.00 0.00 0.00 3.06
4761 5159 2.584608 CCTCCACCACCCGTCATC 59.415 66.667 0.00 0.00 0.00 2.92
4762 5160 2.184322 CTCCACCACCCGTCATCG 59.816 66.667 0.00 0.00 0.00 3.84
4763 5161 4.077184 TCCACCACCCGTCATCGC 62.077 66.667 0.00 0.00 35.54 4.58
4764 5162 4.082523 CCACCACCCGTCATCGCT 62.083 66.667 0.00 0.00 35.54 4.93
4765 5163 2.509336 CACCACCCGTCATCGCTC 60.509 66.667 0.00 0.00 35.54 5.03
4766 5164 2.680352 ACCACCCGTCATCGCTCT 60.680 61.111 0.00 0.00 35.54 4.09
4767 5165 2.105128 CCACCCGTCATCGCTCTC 59.895 66.667 0.00 0.00 35.54 3.20
4768 5166 2.105128 CACCCGTCATCGCTCTCC 59.895 66.667 0.00 0.00 35.54 3.71
4769 5167 2.043852 ACCCGTCATCGCTCTCCT 60.044 61.111 0.00 0.00 35.54 3.69
4770 5168 2.122167 ACCCGTCATCGCTCTCCTC 61.122 63.158 0.00 0.00 35.54 3.71
4771 5169 2.121538 CCCGTCATCGCTCTCCTCA 61.122 63.158 0.00 0.00 35.54 3.86
4772 5170 1.459455 CCCGTCATCGCTCTCCTCAT 61.459 60.000 0.00 0.00 35.54 2.90
4773 5171 0.387202 CCGTCATCGCTCTCCTCATT 59.613 55.000 0.00 0.00 35.54 2.57
4774 5172 1.601663 CCGTCATCGCTCTCCTCATTC 60.602 57.143 0.00 0.00 35.54 2.67
4775 5173 1.601663 CGTCATCGCTCTCCTCATTCC 60.602 57.143 0.00 0.00 0.00 3.01
4776 5174 1.410517 GTCATCGCTCTCCTCATTCCA 59.589 52.381 0.00 0.00 0.00 3.53
4777 5175 2.036992 GTCATCGCTCTCCTCATTCCAT 59.963 50.000 0.00 0.00 0.00 3.41
4778 5176 2.702478 TCATCGCTCTCCTCATTCCATT 59.298 45.455 0.00 0.00 0.00 3.16
4779 5177 2.898729 TCGCTCTCCTCATTCCATTC 57.101 50.000 0.00 0.00 0.00 2.67
4780 5178 2.392662 TCGCTCTCCTCATTCCATTCT 58.607 47.619 0.00 0.00 0.00 2.40
4781 5179 2.363680 TCGCTCTCCTCATTCCATTCTC 59.636 50.000 0.00 0.00 0.00 2.87
4782 5180 2.547642 CGCTCTCCTCATTCCATTCTCC 60.548 54.545 0.00 0.00 0.00 3.71
4783 5181 2.224499 GCTCTCCTCATTCCATTCTCCC 60.224 54.545 0.00 0.00 0.00 4.30
4784 5182 2.371510 CTCTCCTCATTCCATTCTCCCC 59.628 54.545 0.00 0.00 0.00 4.81
4785 5183 2.021639 TCTCCTCATTCCATTCTCCCCT 60.022 50.000 0.00 0.00 0.00 4.79
4786 5184 2.371510 CTCCTCATTCCATTCTCCCCTC 59.628 54.545 0.00 0.00 0.00 4.30
4787 5185 2.021639 TCCTCATTCCATTCTCCCCTCT 60.022 50.000 0.00 0.00 0.00 3.69
4788 5186 2.371510 CCTCATTCCATTCTCCCCTCTC 59.628 54.545 0.00 0.00 0.00 3.20
4789 5187 2.371510 CTCATTCCATTCTCCCCTCTCC 59.628 54.545 0.00 0.00 0.00 3.71
4790 5188 2.021639 TCATTCCATTCTCCCCTCTCCT 60.022 50.000 0.00 0.00 0.00 3.69
4791 5189 2.182516 TTCCATTCTCCCCTCTCCTC 57.817 55.000 0.00 0.00 0.00 3.71
4792 5190 0.266152 TCCATTCTCCCCTCTCCTCC 59.734 60.000 0.00 0.00 0.00 4.30
4793 5191 0.766288 CCATTCTCCCCTCTCCTCCC 60.766 65.000 0.00 0.00 0.00 4.30
4794 5192 0.766288 CATTCTCCCCTCTCCTCCCC 60.766 65.000 0.00 0.00 0.00 4.81
4795 5193 0.938926 ATTCTCCCCTCTCCTCCCCT 60.939 60.000 0.00 0.00 0.00 4.79
4796 5194 1.595058 TTCTCCCCTCTCCTCCCCTC 61.595 65.000 0.00 0.00 0.00 4.30
4797 5195 3.036959 TCCCCTCTCCTCCCCTCC 61.037 72.222 0.00 0.00 0.00 4.30
4798 5196 4.179599 CCCCTCTCCTCCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
4799 5197 4.548513 CCCTCTCCTCCCCTCCCG 62.549 77.778 0.00 0.00 0.00 5.14
4800 5198 3.430497 CCTCTCCTCCCCTCCCGA 61.430 72.222 0.00 0.00 0.00 5.14
4801 5199 2.784654 CCTCTCCTCCCCTCCCGAT 61.785 68.421 0.00 0.00 0.00 4.18
4802 5200 1.234529 CTCTCCTCCCCTCCCGATT 59.765 63.158 0.00 0.00 0.00 3.34
4803 5201 0.399233 CTCTCCTCCCCTCCCGATTT 60.399 60.000 0.00 0.00 0.00 2.17
4804 5202 0.691078 TCTCCTCCCCTCCCGATTTG 60.691 60.000 0.00 0.00 0.00 2.32
4805 5203 2.193248 CCTCCCCTCCCGATTTGC 59.807 66.667 0.00 0.00 0.00 3.68
4806 5204 2.193248 CTCCCCTCCCGATTTGCC 59.807 66.667 0.00 0.00 0.00 4.52
4807 5205 3.757248 CTCCCCTCCCGATTTGCCG 62.757 68.421 0.00 0.00 0.00 5.69
4815 5213 3.564027 CGATTTGCCGGGCTCGTC 61.564 66.667 21.46 13.36 33.95 4.20
4816 5214 2.435938 GATTTGCCGGGCTCGTCA 60.436 61.111 21.46 0.00 33.95 4.35
4817 5215 2.033448 ATTTGCCGGGCTCGTCAA 59.967 55.556 21.46 0.00 32.21 3.18
4818 5216 2.253414 GATTTGCCGGGCTCGTCAAC 62.253 60.000 21.46 0.00 33.88 3.18
4823 5221 2.582498 CGGGCTCGTCAACGGATC 60.582 66.667 0.00 0.00 40.29 3.36
4824 5222 2.893398 GGGCTCGTCAACGGATCT 59.107 61.111 2.31 0.00 40.29 2.75
4825 5223 1.721664 CGGGCTCGTCAACGGATCTA 61.722 60.000 0.00 0.00 40.29 1.98
4826 5224 0.248949 GGGCTCGTCAACGGATCTAC 60.249 60.000 2.31 0.00 40.29 2.59
4827 5225 0.248949 GGCTCGTCAACGGATCTACC 60.249 60.000 2.31 0.00 40.29 3.18
4836 5234 4.414732 GGATCTACCGTTGACGCC 57.585 61.111 0.00 0.00 38.18 5.68
4837 5235 1.588139 GGATCTACCGTTGACGCCG 60.588 63.158 0.00 0.00 38.18 6.46
4838 5236 1.138247 GATCTACCGTTGACGCCGT 59.862 57.895 0.00 0.00 38.18 5.68
4839 5237 0.457337 GATCTACCGTTGACGCCGTT 60.457 55.000 0.00 0.00 38.18 4.44
4840 5238 0.734942 ATCTACCGTTGACGCCGTTG 60.735 55.000 0.00 0.00 38.18 4.10
4841 5239 1.372004 CTACCGTTGACGCCGTTGA 60.372 57.895 0.00 0.00 38.18 3.18
4842 5240 0.940519 CTACCGTTGACGCCGTTGAA 60.941 55.000 0.00 0.00 38.18 2.69
4843 5241 0.529337 TACCGTTGACGCCGTTGAAA 60.529 50.000 0.00 0.00 38.18 2.69
4844 5242 1.083015 CCGTTGACGCCGTTGAAAG 60.083 57.895 0.00 0.00 38.18 2.62
4845 5243 1.083015 CGTTGACGCCGTTGAAAGG 60.083 57.895 0.00 0.00 0.00 3.11
4846 5244 1.768112 CGTTGACGCCGTTGAAAGGT 61.768 55.000 0.00 0.00 0.00 3.50
4847 5245 0.316689 GTTGACGCCGTTGAAAGGTG 60.317 55.000 9.14 9.14 44.36 4.00
4848 5246 1.440938 TTGACGCCGTTGAAAGGTGG 61.441 55.000 14.81 2.67 43.18 4.61
4849 5247 3.249973 GACGCCGTTGAAAGGTGGC 62.250 63.158 14.81 8.27 43.18 5.01
4851 5249 2.644992 GCCGTTGAAAGGTGGCAG 59.355 61.111 0.00 0.00 46.76 4.85
4852 5250 2.919494 GCCGTTGAAAGGTGGCAGG 61.919 63.158 0.00 0.00 46.76 4.85
4853 5251 1.228124 CCGTTGAAAGGTGGCAGGA 60.228 57.895 0.00 0.00 0.00 3.86
4854 5252 1.237285 CCGTTGAAAGGTGGCAGGAG 61.237 60.000 0.00 0.00 0.00 3.69
4855 5253 1.237285 CGTTGAAAGGTGGCAGGAGG 61.237 60.000 0.00 0.00 0.00 4.30
4856 5254 1.228552 TTGAAAGGTGGCAGGAGGC 60.229 57.895 0.00 0.00 43.74 4.70
4857 5255 2.747855 GAAAGGTGGCAGGAGGCG 60.748 66.667 0.00 0.00 46.16 5.52
4858 5256 4.351054 AAAGGTGGCAGGAGGCGG 62.351 66.667 0.00 0.00 46.16 6.13
4879 5277 2.125512 CGTAGCAGGGTGAGGCAC 60.126 66.667 0.00 0.00 0.00 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 9.935241 TGCACCATAATTTTGTTTGTATGTAAT 57.065 25.926 0.00 0.00 0.00 1.89
49 50 9.764363 TTGCACCATAATTTTGTTTGTATGTAA 57.236 25.926 0.00 0.00 0.00 2.41
50 51 9.935241 ATTGCACCATAATTTTGTTTGTATGTA 57.065 25.926 0.00 0.00 0.00 2.29
51 52 8.845413 ATTGCACCATAATTTTGTTTGTATGT 57.155 26.923 0.00 0.00 0.00 2.29
67 68 9.675464 AATCTGAAATTGATTTTATTGCACCAT 57.325 25.926 0.00 0.00 30.84 3.55
68 69 9.504708 AAATCTGAAATTGATTTTATTGCACCA 57.495 25.926 0.00 0.00 40.07 4.17
95 96 9.778741 TGTAGAAAGTCACTGTTCATAGAAAAT 57.221 29.630 3.53 0.00 0.00 1.82
96 97 9.261180 CTGTAGAAAGTCACTGTTCATAGAAAA 57.739 33.333 3.53 0.00 0.00 2.29
97 98 8.421784 ACTGTAGAAAGTCACTGTTCATAGAAA 58.578 33.333 3.53 0.00 0.00 2.52
98 99 7.952671 ACTGTAGAAAGTCACTGTTCATAGAA 58.047 34.615 3.53 0.00 0.00 2.10
99 100 7.526142 ACTGTAGAAAGTCACTGTTCATAGA 57.474 36.000 3.53 0.00 0.00 1.98
100 101 8.297426 TGTACTGTAGAAAGTCACTGTTCATAG 58.703 37.037 0.00 0.00 0.00 2.23
101 102 8.173542 TGTACTGTAGAAAGTCACTGTTCATA 57.826 34.615 0.00 0.00 0.00 2.15
102 103 7.050970 TGTACTGTAGAAAGTCACTGTTCAT 57.949 36.000 0.00 0.00 0.00 2.57
103 104 6.459670 TGTACTGTAGAAAGTCACTGTTCA 57.540 37.500 0.00 0.00 0.00 3.18
104 105 9.291664 GATATGTACTGTAGAAAGTCACTGTTC 57.708 37.037 0.00 0.00 0.00 3.18
105 106 7.968956 CGATATGTACTGTAGAAAGTCACTGTT 59.031 37.037 0.00 0.00 0.00 3.16
106 107 7.473366 CGATATGTACTGTAGAAAGTCACTGT 58.527 38.462 0.00 0.00 0.00 3.55
107 108 6.415280 GCGATATGTACTGTAGAAAGTCACTG 59.585 42.308 0.00 0.00 0.00 3.66
108 109 6.319152 AGCGATATGTACTGTAGAAAGTCACT 59.681 38.462 0.00 0.00 0.00 3.41
109 110 6.496571 AGCGATATGTACTGTAGAAAGTCAC 58.503 40.000 0.00 0.00 0.00 3.67
110 111 6.694877 AGCGATATGTACTGTAGAAAGTCA 57.305 37.500 0.00 0.00 0.00 3.41
111 112 7.637229 TGTAGCGATATGTACTGTAGAAAGTC 58.363 38.462 0.00 0.00 0.00 3.01
112 113 7.282675 ACTGTAGCGATATGTACTGTAGAAAGT 59.717 37.037 0.00 0.00 31.69 2.66
113 114 7.640852 ACTGTAGCGATATGTACTGTAGAAAG 58.359 38.462 0.00 0.00 31.69 2.62
114 115 7.563888 ACTGTAGCGATATGTACTGTAGAAA 57.436 36.000 0.00 0.00 31.69 2.52
115 116 7.095313 GCTACTGTAGCGATATGTACTGTAGAA 60.095 40.741 22.60 4.24 45.43 2.10
116 117 6.368243 GCTACTGTAGCGATATGTACTGTAGA 59.632 42.308 22.60 0.00 45.43 2.59
117 118 6.535811 GCTACTGTAGCGATATGTACTGTAG 58.464 44.000 22.60 18.19 45.39 2.74
118 119 6.477669 GCTACTGTAGCGATATGTACTGTA 57.522 41.667 22.60 0.00 42.62 2.74
119 120 5.359716 GCTACTGTAGCGATATGTACTGT 57.640 43.478 22.60 0.00 42.62 3.55
132 133 1.067212 GGGATGACACGGCTACTGTAG 59.933 57.143 10.48 10.48 0.00 2.74
133 134 1.108776 GGGATGACACGGCTACTGTA 58.891 55.000 0.00 0.00 0.00 2.74
134 135 0.614979 AGGGATGACACGGCTACTGT 60.615 55.000 0.00 0.00 0.00 3.55
135 136 0.537188 AAGGGATGACACGGCTACTG 59.463 55.000 0.00 0.00 0.00 2.74
136 137 0.824759 GAAGGGATGACACGGCTACT 59.175 55.000 0.00 0.00 0.00 2.57
137 138 0.824759 AGAAGGGATGACACGGCTAC 59.175 55.000 0.00 0.00 0.00 3.58
138 139 1.112113 GAGAAGGGATGACACGGCTA 58.888 55.000 0.00 0.00 0.00 3.93
139 140 0.616111 AGAGAAGGGATGACACGGCT 60.616 55.000 0.00 0.00 0.00 5.52
140 141 1.112113 TAGAGAAGGGATGACACGGC 58.888 55.000 0.00 0.00 0.00 5.68
141 142 4.408182 AAATAGAGAAGGGATGACACGG 57.592 45.455 0.00 0.00 0.00 4.94
142 143 4.034510 GCAAAATAGAGAAGGGATGACACG 59.965 45.833 0.00 0.00 0.00 4.49
143 144 4.943705 TGCAAAATAGAGAAGGGATGACAC 59.056 41.667 0.00 0.00 0.00 3.67
144 145 4.943705 GTGCAAAATAGAGAAGGGATGACA 59.056 41.667 0.00 0.00 0.00 3.58
145 146 5.065731 CAGTGCAAAATAGAGAAGGGATGAC 59.934 44.000 0.00 0.00 0.00 3.06
146 147 5.188434 CAGTGCAAAATAGAGAAGGGATGA 58.812 41.667 0.00 0.00 0.00 2.92
147 148 4.337555 CCAGTGCAAAATAGAGAAGGGATG 59.662 45.833 0.00 0.00 0.00 3.51
148 149 4.228210 TCCAGTGCAAAATAGAGAAGGGAT 59.772 41.667 0.00 0.00 0.00 3.85
149 150 3.587061 TCCAGTGCAAAATAGAGAAGGGA 59.413 43.478 0.00 0.00 0.00 4.20
150 151 3.955471 TCCAGTGCAAAATAGAGAAGGG 58.045 45.455 0.00 0.00 0.00 3.95
151 152 6.071728 ACAAATCCAGTGCAAAATAGAGAAGG 60.072 38.462 0.00 0.00 0.00 3.46
152 153 6.917533 ACAAATCCAGTGCAAAATAGAGAAG 58.082 36.000 0.00 0.00 0.00 2.85
153 154 6.899393 ACAAATCCAGTGCAAAATAGAGAA 57.101 33.333 0.00 0.00 0.00 2.87
154 155 7.119699 CAGTACAAATCCAGTGCAAAATAGAGA 59.880 37.037 0.00 0.00 0.00 3.10
155 156 7.094634 ACAGTACAAATCCAGTGCAAAATAGAG 60.095 37.037 0.00 0.00 0.00 2.43
156 157 6.714810 ACAGTACAAATCCAGTGCAAAATAGA 59.285 34.615 0.00 0.00 0.00 1.98
157 158 6.913170 ACAGTACAAATCCAGTGCAAAATAG 58.087 36.000 0.00 0.00 0.00 1.73
158 159 6.892658 ACAGTACAAATCCAGTGCAAAATA 57.107 33.333 0.00 0.00 0.00 1.40
159 160 5.789643 ACAGTACAAATCCAGTGCAAAAT 57.210 34.783 0.00 0.00 0.00 1.82
160 161 5.278266 GCTACAGTACAAATCCAGTGCAAAA 60.278 40.000 0.00 0.00 0.00 2.44
161 162 4.215399 GCTACAGTACAAATCCAGTGCAAA 59.785 41.667 0.00 0.00 0.00 3.68
162 163 3.751175 GCTACAGTACAAATCCAGTGCAA 59.249 43.478 0.00 0.00 0.00 4.08
163 164 3.007940 AGCTACAGTACAAATCCAGTGCA 59.992 43.478 0.00 0.00 0.00 4.57
164 165 3.600388 AGCTACAGTACAAATCCAGTGC 58.400 45.455 0.00 0.00 0.00 4.40
165 166 5.237815 TGAAGCTACAGTACAAATCCAGTG 58.762 41.667 0.00 0.00 0.00 3.66
166 167 5.483685 TGAAGCTACAGTACAAATCCAGT 57.516 39.130 0.00 0.00 0.00 4.00
167 168 6.036517 GTCATGAAGCTACAGTACAAATCCAG 59.963 42.308 0.00 0.00 0.00 3.86
168 169 5.874810 GTCATGAAGCTACAGTACAAATCCA 59.125 40.000 0.00 0.00 0.00 3.41
169 170 5.874810 TGTCATGAAGCTACAGTACAAATCC 59.125 40.000 0.00 0.00 0.00 3.01
170 171 6.968131 TGTCATGAAGCTACAGTACAAATC 57.032 37.500 0.00 0.00 0.00 2.17
171 172 6.540189 GGATGTCATGAAGCTACAGTACAAAT 59.460 38.462 0.00 0.00 0.00 2.32
172 173 5.874810 GGATGTCATGAAGCTACAGTACAAA 59.125 40.000 0.00 0.00 0.00 2.83
173 174 5.419542 GGATGTCATGAAGCTACAGTACAA 58.580 41.667 0.00 0.00 0.00 2.41
174 175 4.141937 GGGATGTCATGAAGCTACAGTACA 60.142 45.833 0.00 0.00 0.00 2.90
175 176 4.100189 AGGGATGTCATGAAGCTACAGTAC 59.900 45.833 0.00 0.00 0.00 2.73
176 177 4.290093 AGGGATGTCATGAAGCTACAGTA 58.710 43.478 0.00 0.00 0.00 2.74
177 178 3.110705 AGGGATGTCATGAAGCTACAGT 58.889 45.455 0.00 0.00 0.00 3.55
178 179 3.834489 AGGGATGTCATGAAGCTACAG 57.166 47.619 0.00 0.00 0.00 2.74
179 180 3.776969 AGAAGGGATGTCATGAAGCTACA 59.223 43.478 0.00 0.00 0.00 2.74
180 181 4.414337 AGAAGGGATGTCATGAAGCTAC 57.586 45.455 0.00 0.00 0.00 3.58
181 182 6.560003 TTAAGAAGGGATGTCATGAAGCTA 57.440 37.500 0.00 0.00 0.00 3.32
182 183 5.441718 TTAAGAAGGGATGTCATGAAGCT 57.558 39.130 0.00 0.00 0.00 3.74
183 184 5.591877 ACATTAAGAAGGGATGTCATGAAGC 59.408 40.000 0.00 0.00 28.29 3.86
184 185 7.636150 AACATTAAGAAGGGATGTCATGAAG 57.364 36.000 0.00 0.00 33.16 3.02
185 186 8.548025 TCTAACATTAAGAAGGGATGTCATGAA 58.452 33.333 0.00 0.00 33.16 2.57
186 187 8.089625 TCTAACATTAAGAAGGGATGTCATGA 57.910 34.615 0.00 0.00 33.16 3.07
187 188 7.443575 CCTCTAACATTAAGAAGGGATGTCATG 59.556 40.741 0.00 0.00 33.16 3.07
188 189 7.348274 TCCTCTAACATTAAGAAGGGATGTCAT 59.652 37.037 0.00 0.00 33.16 3.06
189 190 6.672218 TCCTCTAACATTAAGAAGGGATGTCA 59.328 38.462 0.00 0.00 33.16 3.58
190 191 7.125792 TCCTCTAACATTAAGAAGGGATGTC 57.874 40.000 0.00 0.00 33.16 3.06
191 192 7.202139 GGATCCTCTAACATTAAGAAGGGATGT 60.202 40.741 3.84 0.00 31.55 3.06
192 193 7.164803 GGATCCTCTAACATTAAGAAGGGATG 58.835 42.308 3.84 0.00 31.55 3.51
193 194 6.014156 CGGATCCTCTAACATTAAGAAGGGAT 60.014 42.308 10.75 0.00 33.15 3.85
194 195 5.304614 CGGATCCTCTAACATTAAGAAGGGA 59.695 44.000 10.75 0.00 0.00 4.20
195 196 5.070580 ACGGATCCTCTAACATTAAGAAGGG 59.929 44.000 10.75 0.00 0.00 3.95
196 197 6.163135 ACGGATCCTCTAACATTAAGAAGG 57.837 41.667 10.75 0.00 0.00 3.46
197 198 6.702282 GGAACGGATCCTCTAACATTAAGAAG 59.298 42.308 10.75 0.00 45.56 2.85
198 199 6.579865 GGAACGGATCCTCTAACATTAAGAA 58.420 40.000 10.75 0.00 45.56 2.52
199 200 6.158023 GGAACGGATCCTCTAACATTAAGA 57.842 41.667 10.75 0.00 45.56 2.10
200 201 5.742255 GGGGAACGGATCCTCTAACATTAAG 60.742 48.000 10.75 0.00 46.27 1.85
201 202 4.102054 GGGGAACGGATCCTCTAACATTAA 59.898 45.833 10.75 0.00 46.27 1.40
202 203 3.644738 GGGGAACGGATCCTCTAACATTA 59.355 47.826 10.75 0.00 46.27 1.90
203 204 2.438392 GGGGAACGGATCCTCTAACATT 59.562 50.000 10.75 0.00 46.27 2.71
204 205 2.047830 GGGGAACGGATCCTCTAACAT 58.952 52.381 10.75 0.00 46.27 2.71
205 206 1.492764 GGGGAACGGATCCTCTAACA 58.507 55.000 10.75 0.00 46.27 2.41
229 230 6.745794 TTTGAATCTTGAAAGGGACCAATT 57.254 33.333 0.00 0.00 0.00 2.32
231 232 6.464180 CCATTTTGAATCTTGAAAGGGACCAA 60.464 38.462 0.00 0.00 36.59 3.67
245 246 4.965119 AGCGGAAGTACCATTTTGAATC 57.035 40.909 0.00 0.00 38.90 2.52
246 247 5.476945 AGAAAGCGGAAGTACCATTTTGAAT 59.523 36.000 0.00 0.00 38.90 2.57
252 253 3.435671 CGAAAGAAAGCGGAAGTACCATT 59.564 43.478 0.00 0.00 38.90 3.16
253 254 3.000727 CGAAAGAAAGCGGAAGTACCAT 58.999 45.455 0.00 0.00 38.90 3.55
266 267 3.486383 ACTCTGCAAATCCCGAAAGAAA 58.514 40.909 0.00 0.00 0.00 2.52
273 274 3.923017 AAAGAAACTCTGCAAATCCCG 57.077 42.857 0.00 0.00 0.00 5.14
339 340 2.445682 TGCCCAACCACAGTTTTAGT 57.554 45.000 0.00 0.00 32.45 2.24
340 341 2.627699 ACATGCCCAACCACAGTTTTAG 59.372 45.455 0.00 0.00 32.45 1.85
373 374 7.173735 ACAAGCATGCGAATCATATATTCAGAA 59.826 33.333 13.01 0.00 33.19 3.02
416 417 6.718522 TTTTGTCCGGGAATTAGTCTTTTT 57.281 33.333 0.00 0.00 0.00 1.94
420 421 6.478129 TGTAATTTTGTCCGGGAATTAGTCT 58.522 36.000 0.00 0.00 0.00 3.24
429 430 4.681744 CCATGAATGTAATTTTGTCCGGG 58.318 43.478 0.00 0.00 36.07 5.73
534 536 2.109126 GCCATGAAGTCCTGACGGC 61.109 63.158 0.00 0.00 36.20 5.68
576 578 1.538849 GCCTTGGTTTGCCTGTCTTTG 60.539 52.381 0.00 0.00 35.27 2.77
785 787 7.954788 AGCAGAAGATTATTCCGATTACTTC 57.045 36.000 0.00 0.00 34.46 3.01
995 1001 4.100084 CCGCTCCCACCATGCTCA 62.100 66.667 0.00 0.00 0.00 4.26
1233 1246 1.543871 GGTTGACCGTGGCTTTAAGGA 60.544 52.381 0.00 0.00 0.00 3.36
1234 1247 0.879090 GGTTGACCGTGGCTTTAAGG 59.121 55.000 0.00 0.00 0.00 2.69
1235 1248 1.600023 TGGTTGACCGTGGCTTTAAG 58.400 50.000 0.00 0.00 39.43 1.85
1236 1249 1.883275 CATGGTTGACCGTGGCTTTAA 59.117 47.619 13.46 0.00 46.69 1.52
1239 1252 4.079446 CATGGTTGACCGTGGCTT 57.921 55.556 13.46 0.00 46.69 4.35
1266 1279 3.366985 GCCCAACGATTAAAACTCAAGGG 60.367 47.826 0.00 0.00 35.68 3.95
1278 1291 1.285641 CAAACGCAGCCCAACGATT 59.714 52.632 0.00 0.00 0.00 3.34
1293 1306 2.192861 CCTCCAACCTGCACGCAAA 61.193 57.895 0.00 0.00 0.00 3.68
1367 1380 0.758685 AGGATGAGGAGAGGCTTCCG 60.759 60.000 9.20 0.00 42.29 4.30
1428 1441 9.972106 ATCTTCTAAAACAGGAAGAGAAATGAT 57.028 29.630 10.41 0.00 46.99 2.45
1449 1622 7.370383 TGTTGATGCAAAAGGTAGAAATCTTC 58.630 34.615 0.00 0.00 0.00 2.87
1488 1664 6.470235 GCAACAAGCATATGAACACAATAGTC 59.530 38.462 6.97 0.00 44.79 2.59
1550 1726 2.605338 GCGTGTGACAAGGTAGACGTAA 60.605 50.000 0.00 0.00 0.00 3.18
1574 1750 1.155042 GGCCGATCATGAATGAGAGC 58.845 55.000 0.00 0.00 40.64 4.09
1650 1826 0.738975 CTATCGACTCTTGGCGACCA 59.261 55.000 0.00 0.00 39.56 4.02
1667 1843 5.276461 TCAGCAGAAAAAGTGTCAGACTA 57.724 39.130 1.31 0.00 33.09 2.59
1669 1845 4.882671 TTCAGCAGAAAAAGTGTCAGAC 57.117 40.909 0.00 0.00 0.00 3.51
1724 1901 2.082366 CATGCAGCCAAACGCGAAC 61.082 57.895 15.93 0.00 44.76 3.95
1805 1982 4.513692 TGACAACGTACCTGAAAAATCCAG 59.486 41.667 0.00 0.00 0.00 3.86
1833 2010 3.963622 CGCAGCAAGTTTCAGCTAG 57.036 52.632 0.00 0.00 39.50 3.42
1860 2037 0.877071 CGAAGCCAGCAAACAGATGT 59.123 50.000 0.00 0.00 0.00 3.06
1898 2075 3.120442 AGCGCATAAACAAACGGTTCTAC 60.120 43.478 11.47 0.00 39.29 2.59
1900 2077 1.877443 AGCGCATAAACAAACGGTTCT 59.123 42.857 11.47 0.00 39.29 3.01
1905 2082 0.386605 TGCCAGCGCATAAACAAACG 60.387 50.000 11.47 0.00 41.12 3.60
1919 2096 0.390472 GAAGAACCGAGACCTGCCAG 60.390 60.000 0.00 0.00 0.00 4.85
1979 2156 2.333014 GGAGCTTTCTGAAGTGTCTCG 58.667 52.381 0.00 0.00 35.25 4.04
2133 2311 7.409697 ACTGCACAATAGAAAATAGTATTGCG 58.590 34.615 0.00 0.00 39.34 4.85
2164 2342 9.135843 GCAAATTACTCAACCATACCTTTAAAC 57.864 33.333 0.00 0.00 0.00 2.01
2277 2487 5.105797 TGCTAGCAAAACATCAACATTAGGG 60.106 40.000 16.84 0.00 0.00 3.53
2400 2610 6.506500 TTTCGGAACACCTTAGTAGAGTAG 57.493 41.667 0.00 0.00 0.00 2.57
2411 2621 1.886542 GCCTGAATTTTCGGAACACCT 59.113 47.619 0.61 0.00 35.56 4.00
2425 2635 2.559698 TGAAGATGAAACGGCCTGAA 57.440 45.000 0.00 0.00 0.00 3.02
2427 2637 2.611292 GAGATGAAGATGAAACGGCCTG 59.389 50.000 0.00 0.00 0.00 4.85
2433 2643 6.864685 TGCAAAACATGAGATGAAGATGAAAC 59.135 34.615 0.00 0.00 0.00 2.78
2434 2644 6.983984 TGCAAAACATGAGATGAAGATGAAA 58.016 32.000 0.00 0.00 0.00 2.69
2576 2841 0.109342 AGACACTGCACCAGAAAGGG 59.891 55.000 0.00 0.00 43.89 3.95
2579 2844 0.108585 GGGAGACACTGCACCAGAAA 59.891 55.000 0.00 0.00 35.18 2.52
2583 2848 0.250858 CAATGGGAGACACTGCACCA 60.251 55.000 0.00 0.00 35.39 4.17
2590 2855 5.105797 TGCAATTGTTATCAATGGGAGACAC 60.106 40.000 7.40 0.00 42.60 3.67
2758 3025 2.242047 TTGTAACACCGCAACAGCTA 57.758 45.000 0.00 0.00 0.00 3.32
2833 3100 3.253220 AGTACATACCCACCAACTCCAA 58.747 45.455 0.00 0.00 0.00 3.53
2849 3116 6.657117 TGAGCTAAAAATATGTGGCAAGTACA 59.343 34.615 0.00 0.00 0.00 2.90
2888 3155 2.948979 TCAGTCACCGCAAATCTGTTTT 59.051 40.909 0.00 0.00 0.00 2.43
3014 3281 3.806949 AGGTGAAAACAGAGGGCAATA 57.193 42.857 0.00 0.00 0.00 1.90
3063 3332 5.112220 TCACTGAATTAACTGCTGCAAAG 57.888 39.130 3.02 0.00 0.00 2.77
3223 3615 5.105635 TCAGATGGATGCAAGAAATGTTTCC 60.106 40.000 0.00 0.00 37.92 3.13
3289 3681 4.142116 CCTGCAAATGTCAAAGCCATCATA 60.142 41.667 0.00 0.00 0.00 2.15
3290 3682 3.369052 CCTGCAAATGTCAAAGCCATCAT 60.369 43.478 0.00 0.00 0.00 2.45
3304 3696 0.971386 CTGTGCCTTTCCCTGCAAAT 59.029 50.000 0.00 0.00 39.57 2.32
3493 3886 4.315803 TGCTGGCTTTTTCTGTACTCTAC 58.684 43.478 0.00 0.00 0.00 2.59
3506 3899 1.699634 TGGTAGAGAACTGCTGGCTTT 59.300 47.619 0.00 0.00 0.00 3.51
3597 3990 1.532868 CAGTTGAAGGGTGCTTCTTCG 59.467 52.381 0.00 0.00 42.43 3.79
3633 4026 0.602905 AGAAGAAACCCGCGACAAGG 60.603 55.000 8.23 1.61 0.00 3.61
3652 4045 5.548056 AGAAAAGAGGAATAGGACTGACCAA 59.452 40.000 0.00 0.00 42.04 3.67
3678 4071 5.725362 AGTGGAAGAGGAATCGTTTTCTAG 58.275 41.667 6.26 0.00 0.00 2.43
3699 4093 9.733556 TTTGTGAACATACAATACTATCCAAGT 57.266 29.630 0.00 0.00 40.00 3.16
3706 4100 9.619316 GCACATTTTTGTGAACATACAATACTA 57.381 29.630 10.14 0.00 42.02 1.82
3707 4101 8.140628 TGCACATTTTTGTGAACATACAATACT 58.859 29.630 10.14 0.00 42.02 2.12
3709 4103 8.759641 GTTGCACATTTTTGTGAACATACAATA 58.240 29.630 10.14 0.00 42.02 1.90
3712 4106 6.101997 TGTTGCACATTTTTGTGAACATACA 58.898 32.000 10.14 0.00 42.02 2.29
3745 4139 6.554334 TTGCCTGTAGAAATGTTGTACTTC 57.446 37.500 0.00 0.00 31.26 3.01
3773 4167 1.365699 GCATCCAAGCAAATGCCAAG 58.634 50.000 0.94 0.00 41.92 3.61
3955 4349 5.991606 ACTATAATCTGAAGCTATTGCGCAA 59.008 36.000 27.24 27.24 45.42 4.85
4019 4417 1.880941 CAAGGGTAAGGAGCTAGGGT 58.119 55.000 0.00 0.00 0.00 4.34
4028 4426 0.885879 GAAAACCGGCAAGGGTAAGG 59.114 55.000 0.00 0.00 40.76 2.69
4038 4436 8.442632 AAATAAATACTACTAGGAAAACCGGC 57.557 34.615 0.00 0.00 0.00 6.13
4071 4469 7.712797 ACCGAGTATGACTTGAAAACAAAAAT 58.287 30.769 0.00 0.00 31.05 1.82
4084 4482 4.315803 CAACCAGAAAACCGAGTATGACT 58.684 43.478 0.00 0.00 0.00 3.41
4161 4559 1.529948 ATGCATGGCCAATCTCCGG 60.530 57.895 10.96 0.00 0.00 5.14
4248 4646 7.967854 GGTTGTAATGAATCATCGATCACAAAA 59.032 33.333 0.00 0.00 0.00 2.44
4347 4745 1.065491 TGTGCAGATAACGGCCTCATT 60.065 47.619 0.00 0.00 36.45 2.57
4355 4753 7.326789 ACTTGAAATTTTCATGTGCAGATAACG 59.673 33.333 22.66 0.00 43.71 3.18
4391 4789 8.376270 ACTAAACACCTAGCCTATTATTGGATC 58.624 37.037 0.00 0.00 0.00 3.36
4392 4790 8.276453 ACTAAACACCTAGCCTATTATTGGAT 57.724 34.615 0.00 0.00 0.00 3.41
4394 4792 7.506114 TGACTAAACACCTAGCCTATTATTGG 58.494 38.462 0.00 0.00 0.00 3.16
4425 4823 2.416296 GCCACAACCGGTAAAAATAGGC 60.416 50.000 8.00 11.37 0.00 3.93
4435 4833 0.106619 TAAAAGGTGCCACAACCGGT 60.107 50.000 0.00 0.00 45.53 5.28
4436 4834 1.201414 GATAAAAGGTGCCACAACCGG 59.799 52.381 0.00 0.00 45.53 5.28
4460 4858 3.242016 ACGCACACGATCATGTATTTACG 59.758 43.478 0.00 0.00 43.93 3.18
4461 4859 4.032445 ACACGCACACGATCATGTATTTAC 59.968 41.667 0.00 0.00 43.93 2.01
4462 4860 4.032331 CACACGCACACGATCATGTATTTA 59.968 41.667 0.00 0.00 43.93 1.40
4463 4861 3.000041 ACACGCACACGATCATGTATTT 59.000 40.909 0.00 0.00 43.93 1.40
4464 4862 2.348362 CACACGCACACGATCATGTATT 59.652 45.455 0.00 0.00 43.93 1.89
4465 4863 1.926510 CACACGCACACGATCATGTAT 59.073 47.619 0.00 0.00 43.93 2.29
4466 4864 1.345410 CACACGCACACGATCATGTA 58.655 50.000 0.00 0.00 43.93 2.29
4467 4865 1.900585 GCACACGCACACGATCATGT 61.901 55.000 0.00 0.00 43.93 3.21
4468 4866 1.225827 GCACACGCACACGATCATG 60.226 57.895 0.00 0.00 43.93 3.07
4469 4867 0.950555 AAGCACACGCACACGATCAT 60.951 50.000 0.00 0.00 43.93 2.45
4470 4868 1.594021 AAGCACACGCACACGATCA 60.594 52.632 0.00 0.00 43.93 2.92
4471 4869 1.154599 CAAGCACACGCACACGATC 60.155 57.895 0.00 0.00 43.93 3.69
4472 4870 2.938253 CAAGCACACGCACACGAT 59.062 55.556 0.00 0.00 43.93 3.73
4473 4871 3.935872 GCAAGCACACGCACACGA 61.936 61.111 0.00 0.00 43.93 4.35
4475 4873 2.101965 TTGCAAGCACACGCACAC 59.898 55.556 0.00 0.00 42.27 3.82
4476 4874 2.101965 GTTGCAAGCACACGCACA 59.898 55.556 0.00 0.00 42.27 4.57
4477 4875 1.655350 GAGTTGCAAGCACACGCAC 60.655 57.895 0.00 0.00 42.27 5.34
4478 4876 2.715005 GAGTTGCAAGCACACGCA 59.285 55.556 0.00 0.00 42.27 5.24
4479 4877 2.425773 CGAGTTGCAAGCACACGC 60.426 61.111 0.00 0.00 38.99 5.34
4480 4878 2.425773 GCGAGTTGCAAGCACACG 60.426 61.111 0.00 0.17 45.45 4.49
4509 4907 4.891727 ATCGGATGGTGCGACGCC 62.892 66.667 18.69 8.59 44.37 5.68
4510 4908 3.330853 GATCGGATGGTGCGACGC 61.331 66.667 14.19 14.19 44.37 5.19
4511 4909 3.024609 CGATCGGATGGTGCGACG 61.025 66.667 7.38 0.00 44.37 5.12
4512 4910 3.330853 GCGATCGGATGGTGCGAC 61.331 66.667 18.30 0.00 44.37 5.19
4515 4913 2.890474 AACGCGATCGGATGGTGC 60.890 61.111 15.93 5.18 40.69 5.01
4516 4914 3.005898 CAACGCGATCGGATGGTG 58.994 61.111 15.93 11.34 40.69 4.17
4517 4915 2.890474 GCAACGCGATCGGATGGT 60.890 61.111 15.93 0.00 40.69 3.55
4518 4916 2.162921 GATGCAACGCGATCGGATGG 62.163 60.000 15.93 0.00 40.69 3.51
4519 4917 1.202568 GATGCAACGCGATCGGATG 59.797 57.895 15.93 12.54 40.69 3.51
4520 4918 2.302952 CGATGCAACGCGATCGGAT 61.303 57.895 15.93 7.04 40.69 4.18
4521 4919 2.954346 CGATGCAACGCGATCGGA 60.954 61.111 15.93 1.15 40.69 4.55
4522 4920 3.254654 ACGATGCAACGCGATCGG 61.255 61.111 25.34 9.59 40.72 4.18
4523 4921 2.054840 CACGATGCAACGCGATCG 60.055 61.111 21.73 21.73 41.46 3.69
4524 4922 2.350091 GCACGATGCAACGCGATC 60.350 61.111 15.93 3.91 44.26 3.69
4528 4926 4.794241 GACCGCACGATGCAACGC 62.794 66.667 16.93 3.10 45.36 4.84
4529 4927 4.483683 CGACCGCACGATGCAACG 62.484 66.667 15.38 15.38 45.36 4.10
4530 4928 4.794241 GCGACCGCACGATGCAAC 62.794 66.667 9.73 0.00 45.36 4.17
4555 4953 0.321671 AACCGACCAGATGACACCTG 59.678 55.000 0.00 0.00 0.00 4.00
4556 4954 1.002087 GAAACCGACCAGATGACACCT 59.998 52.381 0.00 0.00 0.00 4.00
4557 4955 1.439679 GAAACCGACCAGATGACACC 58.560 55.000 0.00 0.00 0.00 4.16
4558 4956 1.439679 GGAAACCGACCAGATGACAC 58.560 55.000 0.00 0.00 0.00 3.67
4559 4957 3.927555 GGAAACCGACCAGATGACA 57.072 52.632 0.00 0.00 0.00 3.58
4579 4977 3.561213 CAGGAGATGCAGCGCGTG 61.561 66.667 13.61 13.61 0.00 5.34
4588 4986 1.748122 GCCAGGTGTGCAGGAGATG 60.748 63.158 0.00 0.00 0.00 2.90
4589 4987 2.673523 GCCAGGTGTGCAGGAGAT 59.326 61.111 0.00 0.00 0.00 2.75
4590 4988 3.640407 GGCCAGGTGTGCAGGAGA 61.640 66.667 0.00 0.00 0.00 3.71
4591 4989 4.729918 GGGCCAGGTGTGCAGGAG 62.730 72.222 4.39 0.00 0.00 3.69
4594 4992 3.925630 AATCGGGCCAGGTGTGCAG 62.926 63.158 4.39 0.00 0.00 4.41
4595 4993 3.965258 AATCGGGCCAGGTGTGCA 61.965 61.111 4.39 0.00 0.00 4.57
4596 4994 3.443045 CAATCGGGCCAGGTGTGC 61.443 66.667 4.39 0.00 0.00 4.57
4597 4995 2.034066 ACAATCGGGCCAGGTGTG 59.966 61.111 4.39 2.29 0.00 3.82
4598 4996 2.034066 CACAATCGGGCCAGGTGT 59.966 61.111 4.39 6.17 0.00 4.16
4599 4997 3.443045 GCACAATCGGGCCAGGTG 61.443 66.667 4.39 5.69 0.00 4.00
4647 5045 4.431131 AGTCAATGGCAGGGCGGG 62.431 66.667 0.00 0.00 0.00 6.13
4648 5046 3.136123 CAGTCAATGGCAGGGCGG 61.136 66.667 0.00 0.00 0.00 6.13
4649 5047 3.818787 GCAGTCAATGGCAGGGCG 61.819 66.667 0.00 0.00 0.00 6.13
4650 5048 3.818787 CGCAGTCAATGGCAGGGC 61.819 66.667 0.00 0.00 0.00 5.19
4651 5049 1.078497 TACGCAGTCAATGGCAGGG 60.078 57.895 0.00 0.00 43.93 4.45
4652 5050 1.091771 CCTACGCAGTCAATGGCAGG 61.092 60.000 0.00 0.00 43.93 4.85
4653 5051 0.391661 ACCTACGCAGTCAATGGCAG 60.392 55.000 0.00 0.00 43.93 4.85
4654 5052 0.899019 TACCTACGCAGTCAATGGCA 59.101 50.000 0.00 0.00 43.93 4.92
4655 5053 1.287425 GTACCTACGCAGTCAATGGC 58.713 55.000 0.00 0.00 43.93 4.40
4656 5054 1.556564 CGTACCTACGCAGTCAATGG 58.443 55.000 0.00 0.00 43.93 3.16
4667 5065 1.064654 CTCACTAACGGGCGTACCTAC 59.935 57.143 0.00 0.00 36.97 3.18
4668 5066 1.382522 CTCACTAACGGGCGTACCTA 58.617 55.000 0.00 0.00 36.97 3.08
4669 5067 1.941999 GCTCACTAACGGGCGTACCT 61.942 60.000 0.00 0.00 36.97 3.08
4670 5068 1.517913 GCTCACTAACGGGCGTACC 60.518 63.158 0.00 0.00 0.00 3.34
4671 5069 1.870901 CGCTCACTAACGGGCGTAC 60.871 63.158 0.00 0.00 42.23 3.67
4672 5070 2.486504 CGCTCACTAACGGGCGTA 59.513 61.111 0.00 0.00 42.23 4.42
4675 5073 0.525029 GTCTACGCTCACTAACGGGC 60.525 60.000 0.00 0.00 0.00 6.13
4676 5074 0.806868 TGTCTACGCTCACTAACGGG 59.193 55.000 0.00 0.00 0.00 5.28
4677 5075 2.095364 ACTTGTCTACGCTCACTAACGG 60.095 50.000 0.00 0.00 0.00 4.44
4678 5076 3.198863 ACTTGTCTACGCTCACTAACG 57.801 47.619 0.00 0.00 0.00 3.18
4679 5077 5.087397 CACTACTTGTCTACGCTCACTAAC 58.913 45.833 0.00 0.00 0.00 2.34
4680 5078 4.155462 CCACTACTTGTCTACGCTCACTAA 59.845 45.833 0.00 0.00 0.00 2.24
4681 5079 3.688185 CCACTACTTGTCTACGCTCACTA 59.312 47.826 0.00 0.00 0.00 2.74
4682 5080 2.488545 CCACTACTTGTCTACGCTCACT 59.511 50.000 0.00 0.00 0.00 3.41
4683 5081 2.415625 CCCACTACTTGTCTACGCTCAC 60.416 54.545 0.00 0.00 0.00 3.51
4684 5082 1.816835 CCCACTACTTGTCTACGCTCA 59.183 52.381 0.00 0.00 0.00 4.26
4685 5083 1.134560 CCCCACTACTTGTCTACGCTC 59.865 57.143 0.00 0.00 0.00 5.03
4686 5084 1.183549 CCCCACTACTTGTCTACGCT 58.816 55.000 0.00 0.00 0.00 5.07
4687 5085 0.175073 CCCCCACTACTTGTCTACGC 59.825 60.000 0.00 0.00 0.00 4.42
4688 5086 0.175073 GCCCCCACTACTTGTCTACG 59.825 60.000 0.00 0.00 0.00 3.51
4689 5087 0.175073 CGCCCCCACTACTTGTCTAC 59.825 60.000 0.00 0.00 0.00 2.59
4690 5088 0.974010 CCGCCCCCACTACTTGTCTA 60.974 60.000 0.00 0.00 0.00 2.59
4691 5089 2.291043 CCGCCCCCACTACTTGTCT 61.291 63.158 0.00 0.00 0.00 3.41
4692 5090 2.267961 CCGCCCCCACTACTTGTC 59.732 66.667 0.00 0.00 0.00 3.18
4693 5091 2.528378 ACCGCCCCCACTACTTGT 60.528 61.111 0.00 0.00 0.00 3.16
4694 5092 2.046314 CACCGCCCCCACTACTTG 60.046 66.667 0.00 0.00 0.00 3.16
4695 5093 3.327404 CCACCGCCCCCACTACTT 61.327 66.667 0.00 0.00 0.00 2.24
4706 5104 1.862602 AATTCGAAACTGCCCACCGC 61.863 55.000 0.00 0.00 38.31 5.68
4707 5105 0.596082 AAATTCGAAACTGCCCACCG 59.404 50.000 0.00 0.00 0.00 4.94
4708 5106 1.401018 CGAAATTCGAAACTGCCCACC 60.401 52.381 10.18 0.00 43.74 4.61
4709 5107 1.265905 ACGAAATTCGAAACTGCCCAC 59.734 47.619 22.92 0.00 43.74 4.61
4710 5108 1.265635 CACGAAATTCGAAACTGCCCA 59.734 47.619 22.92 0.00 43.74 5.36
4711 5109 1.963747 CACGAAATTCGAAACTGCCC 58.036 50.000 22.92 0.00 43.74 5.36
4712 5110 1.327507 GCACGAAATTCGAAACTGCC 58.672 50.000 22.92 2.96 43.74 4.85
4713 5111 1.327507 GGCACGAAATTCGAAACTGC 58.672 50.000 22.92 19.39 43.74 4.40
4714 5112 2.032030 AGTGGCACGAAATTCGAAACTG 60.032 45.455 22.92 10.65 43.74 3.16
4715 5113 2.218603 AGTGGCACGAAATTCGAAACT 58.781 42.857 22.92 14.89 43.74 2.66
4716 5114 2.681152 AGTGGCACGAAATTCGAAAC 57.319 45.000 22.92 13.05 43.74 2.78
4717 5115 2.031508 GGAAGTGGCACGAAATTCGAAA 60.032 45.455 22.92 1.39 43.74 3.46
4718 5116 1.533731 GGAAGTGGCACGAAATTCGAA 59.466 47.619 22.92 0.00 43.74 3.71
4719 5117 1.153353 GGAAGTGGCACGAAATTCGA 58.847 50.000 22.92 0.00 43.74 3.71
4720 5118 1.128692 GAGGAAGTGGCACGAAATTCG 59.871 52.381 14.35 14.35 46.93 3.34
4721 5119 1.468914 GGAGGAAGTGGCACGAAATTC 59.531 52.381 12.71 10.21 0.00 2.17
4722 5120 1.534729 GGAGGAAGTGGCACGAAATT 58.465 50.000 12.71 0.01 0.00 1.82
4723 5121 0.322546 GGGAGGAAGTGGCACGAAAT 60.323 55.000 12.71 0.00 0.00 2.17
4724 5122 1.072505 GGGAGGAAGTGGCACGAAA 59.927 57.895 12.71 0.00 0.00 3.46
4725 5123 2.747686 GGGAGGAAGTGGCACGAA 59.252 61.111 12.71 0.00 0.00 3.85
4726 5124 3.319198 GGGGAGGAAGTGGCACGA 61.319 66.667 12.71 0.00 0.00 4.35
4727 5125 4.410400 GGGGGAGGAAGTGGCACG 62.410 72.222 12.71 0.00 0.00 5.34
4743 5141 3.009115 ATGACGGGTGGTGGAGGG 61.009 66.667 0.00 0.00 0.00 4.30
4744 5142 2.584608 GATGACGGGTGGTGGAGG 59.415 66.667 0.00 0.00 0.00 4.30
4745 5143 2.184322 CGATGACGGGTGGTGGAG 59.816 66.667 0.00 0.00 35.72 3.86
4746 5144 4.077184 GCGATGACGGGTGGTGGA 62.077 66.667 0.00 0.00 40.15 4.02
4747 5145 4.082523 AGCGATGACGGGTGGTGG 62.083 66.667 0.00 0.00 40.15 4.61
4748 5146 2.509336 GAGCGATGACGGGTGGTG 60.509 66.667 0.00 0.00 40.15 4.17
4749 5147 2.680352 AGAGCGATGACGGGTGGT 60.680 61.111 0.00 0.00 40.15 4.16
4750 5148 2.105128 GAGAGCGATGACGGGTGG 59.895 66.667 0.00 0.00 40.15 4.61
4751 5149 2.105128 GGAGAGCGATGACGGGTG 59.895 66.667 0.00 0.00 40.15 4.61
4752 5150 2.043852 AGGAGAGCGATGACGGGT 60.044 61.111 0.00 0.00 40.15 5.28
4753 5151 1.459455 ATGAGGAGAGCGATGACGGG 61.459 60.000 0.00 0.00 40.15 5.28
4754 5152 0.387202 AATGAGGAGAGCGATGACGG 59.613 55.000 0.00 0.00 40.15 4.79
4755 5153 1.601663 GGAATGAGGAGAGCGATGACG 60.602 57.143 0.00 0.00 42.93 4.35
4756 5154 1.410517 TGGAATGAGGAGAGCGATGAC 59.589 52.381 0.00 0.00 0.00 3.06
4757 5155 1.780503 TGGAATGAGGAGAGCGATGA 58.219 50.000 0.00 0.00 0.00 2.92
4758 5156 2.835580 ATGGAATGAGGAGAGCGATG 57.164 50.000 0.00 0.00 0.00 3.84
4759 5157 2.971330 AGAATGGAATGAGGAGAGCGAT 59.029 45.455 0.00 0.00 0.00 4.58
4760 5158 2.363680 GAGAATGGAATGAGGAGAGCGA 59.636 50.000 0.00 0.00 0.00 4.93
4761 5159 2.547642 GGAGAATGGAATGAGGAGAGCG 60.548 54.545 0.00 0.00 0.00 5.03
4762 5160 2.224499 GGGAGAATGGAATGAGGAGAGC 60.224 54.545 0.00 0.00 0.00 4.09
4763 5161 2.371510 GGGGAGAATGGAATGAGGAGAG 59.628 54.545 0.00 0.00 0.00 3.20
4764 5162 2.021639 AGGGGAGAATGGAATGAGGAGA 60.022 50.000 0.00 0.00 0.00 3.71
4765 5163 2.371510 GAGGGGAGAATGGAATGAGGAG 59.628 54.545 0.00 0.00 0.00 3.69
4766 5164 2.021639 AGAGGGGAGAATGGAATGAGGA 60.022 50.000 0.00 0.00 0.00 3.71
4767 5165 2.371510 GAGAGGGGAGAATGGAATGAGG 59.628 54.545 0.00 0.00 0.00 3.86
4768 5166 2.371510 GGAGAGGGGAGAATGGAATGAG 59.628 54.545 0.00 0.00 0.00 2.90
4769 5167 2.021639 AGGAGAGGGGAGAATGGAATGA 60.022 50.000 0.00 0.00 0.00 2.57
4770 5168 2.371510 GAGGAGAGGGGAGAATGGAATG 59.628 54.545 0.00 0.00 0.00 2.67
4771 5169 2.698653 GGAGGAGAGGGGAGAATGGAAT 60.699 54.545 0.00 0.00 0.00 3.01
4772 5170 1.344496 GGAGGAGAGGGGAGAATGGAA 60.344 57.143 0.00 0.00 0.00 3.53
4773 5171 0.266152 GGAGGAGAGGGGAGAATGGA 59.734 60.000 0.00 0.00 0.00 3.41
4774 5172 0.766288 GGGAGGAGAGGGGAGAATGG 60.766 65.000 0.00 0.00 0.00 3.16
4775 5173 0.766288 GGGGAGGAGAGGGGAGAATG 60.766 65.000 0.00 0.00 0.00 2.67
4776 5174 0.938926 AGGGGAGGAGAGGGGAGAAT 60.939 60.000 0.00 0.00 0.00 2.40
4777 5175 1.550374 AGGGGAGGAGAGGGGAGAA 60.550 63.158 0.00 0.00 0.00 2.87
4778 5176 2.015726 GAGGGGAGGAGAGGGGAGA 61.016 68.421 0.00 0.00 0.00 3.71
4779 5177 2.612251 GAGGGGAGGAGAGGGGAG 59.388 72.222 0.00 0.00 0.00 4.30
4780 5178 3.036959 GGAGGGGAGGAGAGGGGA 61.037 72.222 0.00 0.00 0.00 4.81
4781 5179 4.179599 GGGAGGGGAGGAGAGGGG 62.180 77.778 0.00 0.00 0.00 4.79
4782 5180 4.548513 CGGGAGGGGAGGAGAGGG 62.549 77.778 0.00 0.00 0.00 4.30
4783 5181 2.319410 AATCGGGAGGGGAGGAGAGG 62.319 65.000 0.00 0.00 0.00 3.69
4784 5182 0.399233 AAATCGGGAGGGGAGGAGAG 60.399 60.000 0.00 0.00 0.00 3.20
4785 5183 0.691078 CAAATCGGGAGGGGAGGAGA 60.691 60.000 0.00 0.00 0.00 3.71
4786 5184 1.832912 CAAATCGGGAGGGGAGGAG 59.167 63.158 0.00 0.00 0.00 3.69
4787 5185 2.375345 GCAAATCGGGAGGGGAGGA 61.375 63.158 0.00 0.00 0.00 3.71
4788 5186 2.193248 GCAAATCGGGAGGGGAGG 59.807 66.667 0.00 0.00 0.00 4.30
4789 5187 2.193248 GGCAAATCGGGAGGGGAG 59.807 66.667 0.00 0.00 0.00 4.30
4790 5188 3.792736 CGGCAAATCGGGAGGGGA 61.793 66.667 0.00 0.00 0.00 4.81
4791 5189 4.875713 CCGGCAAATCGGGAGGGG 62.876 72.222 0.00 0.00 45.78 4.79
4798 5196 3.564027 GACGAGCCCGGCAAATCG 61.564 66.667 13.15 14.74 44.91 3.34
4805 5203 4.143333 ATCCGTTGACGAGCCCGG 62.143 66.667 4.91 0.00 43.02 5.73
4806 5204 1.721664 TAGATCCGTTGACGAGCCCG 61.722 60.000 4.91 0.00 43.02 6.13
4807 5205 0.248949 GTAGATCCGTTGACGAGCCC 60.249 60.000 4.91 0.00 43.02 5.19
4808 5206 0.248949 GGTAGATCCGTTGACGAGCC 60.249 60.000 4.91 0.00 43.02 4.70
4809 5207 3.253416 GGTAGATCCGTTGACGAGC 57.747 57.895 4.91 0.00 43.02 5.03
4819 5217 1.588139 CGGCGTCAACGGTAGATCC 60.588 63.158 0.00 0.00 40.23 3.36
4820 5218 0.457337 AACGGCGTCAACGGTAGATC 60.457 55.000 15.17 0.00 40.23 2.75
4821 5219 0.734942 CAACGGCGTCAACGGTAGAT 60.735 55.000 15.17 0.00 40.23 1.98
4822 5220 1.372004 CAACGGCGTCAACGGTAGA 60.372 57.895 15.17 0.00 40.23 2.59
4823 5221 0.940519 TTCAACGGCGTCAACGGTAG 60.941 55.000 15.17 0.00 40.23 3.18
4824 5222 0.529337 TTTCAACGGCGTCAACGGTA 60.529 50.000 15.17 0.00 40.23 4.02
4825 5223 1.768112 CTTTCAACGGCGTCAACGGT 61.768 55.000 15.17 0.00 40.23 4.83
4826 5224 1.083015 CTTTCAACGGCGTCAACGG 60.083 57.895 15.17 0.80 40.23 4.44
4827 5225 1.083015 CCTTTCAACGGCGTCAACG 60.083 57.895 15.17 7.09 43.27 4.10
4828 5226 0.316689 CACCTTTCAACGGCGTCAAC 60.317 55.000 15.17 0.00 0.00 3.18
4829 5227 1.440938 CCACCTTTCAACGGCGTCAA 61.441 55.000 15.17 6.64 0.00 3.18
4830 5228 1.890041 CCACCTTTCAACGGCGTCA 60.890 57.895 15.17 0.00 0.00 4.35
4831 5229 2.943653 CCACCTTTCAACGGCGTC 59.056 61.111 15.17 0.00 0.00 5.19
4832 5230 3.284449 GCCACCTTTCAACGGCGT 61.284 61.111 6.77 6.77 34.26 5.68
4834 5232 2.644992 CTGCCACCTTTCAACGGC 59.355 61.111 0.00 0.00 45.11 5.68
4835 5233 1.228124 TCCTGCCACCTTTCAACGG 60.228 57.895 0.00 0.00 0.00 4.44
4836 5234 1.237285 CCTCCTGCCACCTTTCAACG 61.237 60.000 0.00 0.00 0.00 4.10
4837 5235 1.527433 GCCTCCTGCCACCTTTCAAC 61.527 60.000 0.00 0.00 0.00 3.18
4838 5236 1.228552 GCCTCCTGCCACCTTTCAA 60.229 57.895 0.00 0.00 0.00 2.69
4839 5237 2.436109 GCCTCCTGCCACCTTTCA 59.564 61.111 0.00 0.00 0.00 2.69
4840 5238 2.747855 CGCCTCCTGCCACCTTTC 60.748 66.667 0.00 0.00 36.24 2.62
4841 5239 4.351054 CCGCCTCCTGCCACCTTT 62.351 66.667 0.00 0.00 36.24 3.11
4849 5247 3.905678 CTACGCCTCCGCCTCCTG 61.906 72.222 0.00 0.00 38.22 3.86
4852 5250 4.577246 CTGCTACGCCTCCGCCTC 62.577 72.222 0.00 0.00 38.22 4.70
4856 5254 4.514577 CACCCTGCTACGCCTCCG 62.515 72.222 0.00 0.00 41.14 4.63
4857 5255 3.075005 TCACCCTGCTACGCCTCC 61.075 66.667 0.00 0.00 0.00 4.30
4858 5256 2.496817 CTCACCCTGCTACGCCTC 59.503 66.667 0.00 0.00 0.00 4.70
4859 5257 3.077556 CCTCACCCTGCTACGCCT 61.078 66.667 0.00 0.00 0.00 5.52
4860 5258 4.840005 GCCTCACCCTGCTACGCC 62.840 72.222 0.00 0.00 0.00 5.68
4861 5259 4.082523 TGCCTCACCCTGCTACGC 62.083 66.667 0.00 0.00 0.00 4.42
4862 5260 2.125512 GTGCCTCACCCTGCTACG 60.126 66.667 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.