Multiple sequence alignment - TraesCS5D01G135800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G135800 chr5D 100.000 3800 0 0 1 3800 216158713 216154914 0.000000e+00 7018.0
1 TraesCS5D01G135800 chr5D 86.691 278 33 3 217 493 348516972 348517246 4.770000e-79 305.0
2 TraesCS5D01G135800 chr5B 97.070 2935 75 7 875 3800 232297567 232294635 0.000000e+00 4933.0
3 TraesCS5D01G135800 chr5B 97.674 43 1 0 759 801 232298260 232298218 1.460000e-09 75.0
4 TraesCS5D01G135800 chr5A 97.256 2915 69 6 891 3798 285399432 285396522 0.000000e+00 4929.0
5 TraesCS5D01G135800 chr2D 87.500 280 33 2 217 494 602132882 602132603 4.740000e-84 322.0
6 TraesCS5D01G135800 chr2D 86.380 279 37 1 217 494 602170372 602170094 1.720000e-78 303.0
7 TraesCS5D01G135800 chr2D 86.071 280 37 2 217 494 602226707 602226428 2.220000e-77 300.0
8 TraesCS5D01G135800 chr7B 86.786 280 33 4 217 494 727205812 727205535 3.690000e-80 309.0
9 TraesCS5D01G135800 chr3A 85.172 290 40 3 217 503 729319273 729318984 1.030000e-75 294.0
10 TraesCS5D01G135800 chrUn 85.714 280 37 3 217 494 17329377 17329655 3.710000e-75 292.0
11 TraesCS5D01G135800 chr6B 85.663 279 38 2 216 492 412572898 412573176 3.710000e-75 292.0
12 TraesCS5D01G135800 chr3D 84.859 284 41 2 212 494 74457817 74458099 6.210000e-73 285.0
13 TraesCS5D01G135800 chr1D 80.693 202 29 8 503 696 41431778 41431977 8.500000e-32 148.0
14 TraesCS5D01G135800 chr7A 89.706 68 7 0 503 570 181785384 181785451 1.880000e-13 87.9
15 TraesCS5D01G135800 chr1B 91.379 58 5 0 3474 3531 523233920 523233977 3.150000e-11 80.5
16 TraesCS5D01G135800 chr2B 90.698 43 3 1 3463 3505 131182248 131182289 5.300000e-04 56.5
17 TraesCS5D01G135800 chr6A 100.000 28 0 0 3773 3800 22685351 22685324 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G135800 chr5D 216154914 216158713 3799 True 7018 7018 100.000 1 3800 1 chr5D.!!$R1 3799
1 TraesCS5D01G135800 chr5B 232294635 232298260 3625 True 2504 4933 97.372 759 3800 2 chr5B.!!$R1 3041
2 TraesCS5D01G135800 chr5A 285396522 285399432 2910 True 4929 4929 97.256 891 3798 1 chr5A.!!$R1 2907

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
149 150 0.039708 GTGAGCAGGCAAAGCACTTC 60.040 55.0 0.0 0.0 0.00 3.01 F
454 455 0.107410 ACTCTTTCACCCGCACAACA 60.107 50.0 0.0 0.0 0.00 3.33 F
492 493 0.169009 GAAAGCACATTGAGTCGCCC 59.831 55.0 0.0 0.0 0.00 6.13 F
521 522 0.172803 AGTGTAGGGCGTCGAATCAC 59.827 55.0 0.0 0.0 0.00 3.06 F
522 523 0.172803 GTGTAGGGCGTCGAATCACT 59.827 55.0 0.0 0.0 0.00 3.41 F
869 871 0.537188 CGCCAGGTTGGAGTACATCT 59.463 55.0 0.0 0.0 40.96 2.90 F
1713 2308 0.689080 AGATGAGCATCCGGGACACT 60.689 55.0 0.0 0.0 38.58 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1109 1704 0.460284 GGAGATGGCACGTTCGATGT 60.460 55.000 0.00 0.0 0.00 3.06 R
1381 1976 1.135199 GGATACAACGTTGCGAGAGGA 60.135 52.381 27.61 0.0 0.00 3.71 R
1452 2047 2.029073 CGGGCGAACACACAGAGT 59.971 61.111 0.00 0.0 0.00 3.24 R
2494 3089 0.250770 AAAAGGGACTCCGCCACTTC 60.251 55.000 0.00 0.0 38.49 3.01 R
2630 3225 0.475906 ACTGCAAGCTTGGTCCTTCT 59.524 50.000 27.10 0.0 37.60 2.85 R
2663 3258 2.294233 ACAAACATGTGCTTCGCATTCT 59.706 40.909 0.00 0.0 41.91 2.40 R
3695 4293 1.009829 GTCAGTAATGCCAAGCCTCG 58.990 55.000 0.00 0.0 0.00 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.983910 TGTTAAAACAAACAAACGATTCAGC 58.016 32.000 0.00 0.00 36.45 4.26
25 26 6.809196 TGTTAAAACAAACAAACGATTCAGCT 59.191 30.769 0.00 0.00 36.45 4.24
26 27 5.701029 AAAACAAACAAACGATTCAGCTG 57.299 34.783 7.63 7.63 0.00 4.24
27 28 4.630894 AACAAACAAACGATTCAGCTGA 57.369 36.364 13.74 13.74 0.00 4.26
28 29 3.952535 ACAAACAAACGATTCAGCTGAC 58.047 40.909 18.03 4.92 0.00 3.51
29 30 3.627577 ACAAACAAACGATTCAGCTGACT 59.372 39.130 18.03 11.94 0.00 3.41
30 31 4.096382 ACAAACAAACGATTCAGCTGACTT 59.904 37.500 18.03 7.03 0.00 3.01
31 32 5.295787 ACAAACAAACGATTCAGCTGACTTA 59.704 36.000 18.03 1.61 0.00 2.24
32 33 6.183360 ACAAACAAACGATTCAGCTGACTTAA 60.183 34.615 18.03 1.16 0.00 1.85
33 34 5.344207 ACAAACGATTCAGCTGACTTAAC 57.656 39.130 18.03 0.00 0.00 2.01
34 35 5.057149 ACAAACGATTCAGCTGACTTAACT 58.943 37.500 18.03 0.00 0.00 2.24
35 36 6.220930 ACAAACGATTCAGCTGACTTAACTA 58.779 36.000 18.03 0.00 0.00 2.24
36 37 6.874134 ACAAACGATTCAGCTGACTTAACTAT 59.126 34.615 18.03 5.06 0.00 2.12
37 38 6.893958 AACGATTCAGCTGACTTAACTATG 57.106 37.500 18.03 3.51 0.00 2.23
38 39 5.352284 ACGATTCAGCTGACTTAACTATGG 58.648 41.667 18.03 9.22 0.00 2.74
39 40 5.127194 ACGATTCAGCTGACTTAACTATGGA 59.873 40.000 18.03 0.00 0.00 3.41
40 41 5.460419 CGATTCAGCTGACTTAACTATGGAC 59.540 44.000 18.03 0.00 0.00 4.02
41 42 4.371855 TCAGCTGACTTAACTATGGACG 57.628 45.455 13.74 0.00 0.00 4.79
42 43 4.014406 TCAGCTGACTTAACTATGGACGA 58.986 43.478 13.74 0.00 0.00 4.20
43 44 4.106197 CAGCTGACTTAACTATGGACGAC 58.894 47.826 8.42 0.00 0.00 4.34
44 45 3.106672 GCTGACTTAACTATGGACGACG 58.893 50.000 0.00 0.00 0.00 5.12
45 46 3.692576 CTGACTTAACTATGGACGACGG 58.307 50.000 0.00 0.00 0.00 4.79
46 47 2.424601 TGACTTAACTATGGACGACGGG 59.575 50.000 0.00 0.00 0.00 5.28
47 48 2.424956 GACTTAACTATGGACGACGGGT 59.575 50.000 0.00 0.00 0.00 5.28
48 49 2.827921 ACTTAACTATGGACGACGGGTT 59.172 45.455 0.00 0.00 0.00 4.11
49 50 2.945447 TAACTATGGACGACGGGTTG 57.055 50.000 0.00 0.00 0.00 3.77
50 51 1.259609 AACTATGGACGACGGGTTGA 58.740 50.000 0.00 0.00 0.00 3.18
51 52 1.481871 ACTATGGACGACGGGTTGAT 58.518 50.000 0.00 0.00 0.00 2.57
52 53 1.829222 ACTATGGACGACGGGTTGATT 59.171 47.619 0.00 0.00 0.00 2.57
53 54 3.025978 ACTATGGACGACGGGTTGATTA 58.974 45.455 0.00 0.00 0.00 1.75
54 55 2.304751 ATGGACGACGGGTTGATTAC 57.695 50.000 0.00 0.00 0.00 1.89
55 56 0.967662 TGGACGACGGGTTGATTACA 59.032 50.000 0.00 0.00 0.00 2.41
56 57 1.551430 TGGACGACGGGTTGATTACAT 59.449 47.619 0.00 0.00 0.00 2.29
57 58 1.931172 GGACGACGGGTTGATTACATG 59.069 52.381 0.00 0.00 0.00 3.21
58 59 2.417651 GGACGACGGGTTGATTACATGA 60.418 50.000 0.00 0.00 0.00 3.07
59 60 3.255725 GACGACGGGTTGATTACATGAA 58.744 45.455 0.00 0.00 0.00 2.57
60 61 3.666274 ACGACGGGTTGATTACATGAAA 58.334 40.909 0.00 0.00 0.00 2.69
61 62 4.258543 ACGACGGGTTGATTACATGAAAT 58.741 39.130 0.00 0.00 0.00 2.17
124 125 7.189079 AGGGTTTCCTTTTTGTAAAATGACA 57.811 32.000 4.99 0.00 41.56 3.58
125 126 7.045416 AGGGTTTCCTTTTTGTAAAATGACAC 58.955 34.615 4.99 0.00 41.56 3.67
126 127 6.019398 GGGTTTCCTTTTTGTAAAATGACACG 60.019 38.462 4.99 0.00 0.00 4.49
127 128 6.752815 GGTTTCCTTTTTGTAAAATGACACGA 59.247 34.615 0.00 0.00 0.00 4.35
128 129 7.253850 GGTTTCCTTTTTGTAAAATGACACGAC 60.254 37.037 0.00 0.00 0.00 4.34
129 130 5.503498 TCCTTTTTGTAAAATGACACGACG 58.497 37.500 0.00 0.00 0.00 5.12
130 131 4.673311 CCTTTTTGTAAAATGACACGACGG 59.327 41.667 0.00 0.00 0.00 4.79
131 132 4.879104 TTTTGTAAAATGACACGACGGT 57.121 36.364 0.00 0.00 0.00 4.83
141 142 3.923864 ACGACGGTGAGCAGGCAA 61.924 61.111 0.00 0.00 0.00 4.52
142 143 2.664851 CGACGGTGAGCAGGCAAA 60.665 61.111 0.00 0.00 0.00 3.68
143 144 2.671177 CGACGGTGAGCAGGCAAAG 61.671 63.158 0.00 0.00 0.00 2.77
144 145 2.970974 GACGGTGAGCAGGCAAAGC 61.971 63.158 0.00 0.00 0.00 3.51
145 146 2.979676 CGGTGAGCAGGCAAAGCA 60.980 61.111 0.00 0.00 0.00 3.91
146 147 2.647297 GGTGAGCAGGCAAAGCAC 59.353 61.111 0.00 0.00 0.00 4.40
147 148 1.900498 GGTGAGCAGGCAAAGCACT 60.900 57.895 0.00 0.00 0.00 4.40
148 149 1.458639 GGTGAGCAGGCAAAGCACTT 61.459 55.000 0.00 0.00 0.00 3.16
149 150 0.039708 GTGAGCAGGCAAAGCACTTC 60.040 55.000 0.00 0.00 0.00 3.01
150 151 1.208614 GAGCAGGCAAAGCACTTCG 59.791 57.895 0.00 0.00 0.00 3.79
151 152 1.510480 GAGCAGGCAAAGCACTTCGT 61.510 55.000 0.00 0.00 0.00 3.85
152 153 1.370900 GCAGGCAAAGCACTTCGTG 60.371 57.895 0.00 0.00 36.51 4.35
168 169 7.534085 CACTTCGTGCTTTATTATTAGGTCA 57.466 36.000 0.00 0.00 0.00 4.02
169 170 7.399523 CACTTCGTGCTTTATTATTAGGTCAC 58.600 38.462 0.00 0.00 0.00 3.67
170 171 7.064134 CACTTCGTGCTTTATTATTAGGTCACA 59.936 37.037 0.00 0.00 0.00 3.58
171 172 7.604927 ACTTCGTGCTTTATTATTAGGTCACAA 59.395 33.333 0.00 0.00 0.00 3.33
172 173 8.500753 TTCGTGCTTTATTATTAGGTCACAAT 57.499 30.769 0.00 0.00 0.00 2.71
173 174 9.602568 TTCGTGCTTTATTATTAGGTCACAATA 57.397 29.630 0.00 0.00 0.00 1.90
174 175 9.602568 TCGTGCTTTATTATTAGGTCACAATAA 57.397 29.630 0.00 0.00 33.58 1.40
183 184 6.980051 ATTAGGTCACAATAAAGAACGACC 57.020 37.500 0.00 0.00 42.64 4.79
184 185 4.345859 AGGTCACAATAAAGAACGACCA 57.654 40.909 8.92 0.00 44.34 4.02
185 186 4.062991 AGGTCACAATAAAGAACGACCAC 58.937 43.478 8.92 0.00 44.34 4.16
186 187 3.810941 GGTCACAATAAAGAACGACCACA 59.189 43.478 0.00 0.00 42.04 4.17
187 188 4.454504 GGTCACAATAAAGAACGACCACAT 59.545 41.667 0.00 0.00 42.04 3.21
188 189 5.640357 GGTCACAATAAAGAACGACCACATA 59.360 40.000 0.00 0.00 42.04 2.29
189 190 6.148150 GGTCACAATAAAGAACGACCACATAA 59.852 38.462 0.00 0.00 42.04 1.90
190 191 7.234384 GTCACAATAAAGAACGACCACATAAG 58.766 38.462 0.00 0.00 0.00 1.73
191 192 6.370442 TCACAATAAAGAACGACCACATAAGG 59.630 38.462 0.00 0.00 0.00 2.69
192 193 6.148811 CACAATAAAGAACGACCACATAAGGT 59.851 38.462 0.00 0.00 46.82 3.50
193 194 7.332430 CACAATAAAGAACGACCACATAAGGTA 59.668 37.037 0.00 0.00 43.38 3.08
194 195 7.332678 ACAATAAAGAACGACCACATAAGGTAC 59.667 37.037 0.00 0.00 43.38 3.34
195 196 4.877378 AAGAACGACCACATAAGGTACA 57.123 40.909 0.00 0.00 43.38 2.90
196 197 4.184079 AGAACGACCACATAAGGTACAC 57.816 45.455 0.00 0.00 43.38 2.90
197 198 3.056322 AGAACGACCACATAAGGTACACC 60.056 47.826 0.00 0.00 43.38 4.16
215 216 9.080097 AGGTACACCTCTATTGATACTCATAAC 57.920 37.037 0.00 0.00 44.77 1.89
216 217 9.080097 GGTACACCTCTATTGATACTCATAACT 57.920 37.037 0.00 0.00 0.00 2.24
337 338 9.965902 ATGACTAAGAATTACAATGAAACCTCT 57.034 29.630 0.00 0.00 0.00 3.69
338 339 9.793259 TGACTAAGAATTACAATGAAACCTCTT 57.207 29.630 0.00 0.00 0.00 2.85
348 349 9.802039 TTACAATGAAACCTCTTATAAACACCT 57.198 29.630 0.00 0.00 0.00 4.00
349 350 8.706322 ACAATGAAACCTCTTATAAACACCTT 57.294 30.769 0.00 0.00 0.00 3.50
350 351 9.143155 ACAATGAAACCTCTTATAAACACCTTT 57.857 29.630 0.00 0.00 0.00 3.11
351 352 9.981114 CAATGAAACCTCTTATAAACACCTTTT 57.019 29.630 0.00 0.00 0.00 2.27
371 372 5.957842 TTTTTGCGGTATCAATCTCTGTT 57.042 34.783 0.00 0.00 0.00 3.16
372 373 5.545658 TTTTGCGGTATCAATCTCTGTTC 57.454 39.130 0.00 0.00 0.00 3.18
373 374 2.809446 TGCGGTATCAATCTCTGTTCG 58.191 47.619 0.00 0.00 0.00 3.95
374 375 2.425668 TGCGGTATCAATCTCTGTTCGA 59.574 45.455 0.00 0.00 0.00 3.71
375 376 3.119280 TGCGGTATCAATCTCTGTTCGAA 60.119 43.478 0.00 0.00 0.00 3.71
376 377 3.863424 GCGGTATCAATCTCTGTTCGAAA 59.137 43.478 0.00 0.00 0.00 3.46
377 378 4.328983 GCGGTATCAATCTCTGTTCGAAAA 59.671 41.667 0.00 0.00 0.00 2.29
378 379 5.163893 GCGGTATCAATCTCTGTTCGAAAAA 60.164 40.000 0.00 0.00 0.00 1.94
407 408 9.057089 ACTACAAAGACTTTGATAAAGAGGTTG 57.943 33.333 30.01 10.85 43.26 3.77
408 409 7.881775 ACAAAGACTTTGATAAAGAGGTTGT 57.118 32.000 30.01 4.89 43.26 3.32
409 410 8.974060 ACAAAGACTTTGATAAAGAGGTTGTA 57.026 30.769 30.01 0.00 43.26 2.41
410 411 9.403583 ACAAAGACTTTGATAAAGAGGTTGTAA 57.596 29.630 30.01 0.00 43.26 2.41
419 420 9.667107 TTGATAAAGAGGTTGTAATTAGACTGG 57.333 33.333 0.00 0.00 0.00 4.00
420 421 9.042450 TGATAAAGAGGTTGTAATTAGACTGGA 57.958 33.333 0.00 0.00 0.00 3.86
421 422 9.535878 GATAAAGAGGTTGTAATTAGACTGGAG 57.464 37.037 0.00 0.00 0.00 3.86
422 423 6.936968 AAGAGGTTGTAATTAGACTGGAGT 57.063 37.500 0.00 0.00 0.00 3.85
423 424 8.431910 AAAGAGGTTGTAATTAGACTGGAGTA 57.568 34.615 0.00 0.00 0.00 2.59
424 425 8.431910 AAGAGGTTGTAATTAGACTGGAGTAA 57.568 34.615 0.00 0.00 0.00 2.24
425 426 7.838884 AGAGGTTGTAATTAGACTGGAGTAAC 58.161 38.462 0.00 0.00 0.00 2.50
426 427 6.628185 AGGTTGTAATTAGACTGGAGTAACG 58.372 40.000 0.00 0.00 0.00 3.18
427 428 6.435277 AGGTTGTAATTAGACTGGAGTAACGA 59.565 38.462 0.00 0.00 0.00 3.85
428 429 7.123847 AGGTTGTAATTAGACTGGAGTAACGAT 59.876 37.037 0.00 0.00 0.00 3.73
429 430 8.408601 GGTTGTAATTAGACTGGAGTAACGATA 58.591 37.037 0.00 0.00 0.00 2.92
430 431 9.962783 GTTGTAATTAGACTGGAGTAACGATAT 57.037 33.333 0.00 0.00 0.00 1.63
432 433 9.961265 TGTAATTAGACTGGAGTAACGATATTG 57.039 33.333 0.00 0.00 0.00 1.90
433 434 9.962783 GTAATTAGACTGGAGTAACGATATTGT 57.037 33.333 0.00 0.00 0.00 2.71
435 436 7.634671 TTAGACTGGAGTAACGATATTGTCA 57.365 36.000 0.00 0.00 0.00 3.58
436 437 5.892568 AGACTGGAGTAACGATATTGTCAC 58.107 41.667 0.00 0.00 0.00 3.67
437 438 5.652891 AGACTGGAGTAACGATATTGTCACT 59.347 40.000 0.00 0.00 0.00 3.41
438 439 5.892568 ACTGGAGTAACGATATTGTCACTC 58.107 41.667 15.78 15.78 33.31 3.51
439 440 5.652891 ACTGGAGTAACGATATTGTCACTCT 59.347 40.000 21.20 4.15 34.28 3.24
440 441 6.153000 ACTGGAGTAACGATATTGTCACTCTT 59.847 38.462 21.20 7.72 34.28 2.85
441 442 6.931838 TGGAGTAACGATATTGTCACTCTTT 58.068 36.000 21.20 0.00 34.28 2.52
442 443 7.033791 TGGAGTAACGATATTGTCACTCTTTC 58.966 38.462 21.20 9.33 34.28 2.62
443 444 7.033791 GGAGTAACGATATTGTCACTCTTTCA 58.966 38.462 21.20 0.00 34.28 2.69
444 445 7.009357 GGAGTAACGATATTGTCACTCTTTCAC 59.991 40.741 21.20 5.44 34.28 3.18
445 446 6.812160 AGTAACGATATTGTCACTCTTTCACC 59.188 38.462 0.00 0.00 0.00 4.02
446 447 4.504858 ACGATATTGTCACTCTTTCACCC 58.495 43.478 0.00 0.00 0.00 4.61
447 448 3.551890 CGATATTGTCACTCTTTCACCCG 59.448 47.826 0.00 0.00 0.00 5.28
448 449 1.523758 ATTGTCACTCTTTCACCCGC 58.476 50.000 0.00 0.00 0.00 6.13
449 450 0.179234 TTGTCACTCTTTCACCCGCA 59.821 50.000 0.00 0.00 0.00 5.69
450 451 0.531974 TGTCACTCTTTCACCCGCAC 60.532 55.000 0.00 0.00 0.00 5.34
451 452 0.531974 GTCACTCTTTCACCCGCACA 60.532 55.000 0.00 0.00 0.00 4.57
452 453 0.179234 TCACTCTTTCACCCGCACAA 59.821 50.000 0.00 0.00 0.00 3.33
453 454 0.307760 CACTCTTTCACCCGCACAAC 59.692 55.000 0.00 0.00 0.00 3.32
454 455 0.107410 ACTCTTTCACCCGCACAACA 60.107 50.000 0.00 0.00 0.00 3.33
455 456 1.238439 CTCTTTCACCCGCACAACAT 58.762 50.000 0.00 0.00 0.00 2.71
456 457 1.608590 CTCTTTCACCCGCACAACATT 59.391 47.619 0.00 0.00 0.00 2.71
457 458 2.811431 CTCTTTCACCCGCACAACATTA 59.189 45.455 0.00 0.00 0.00 1.90
458 459 3.417101 TCTTTCACCCGCACAACATTAT 58.583 40.909 0.00 0.00 0.00 1.28
459 460 3.438781 TCTTTCACCCGCACAACATTATC 59.561 43.478 0.00 0.00 0.00 1.75
460 461 2.481289 TCACCCGCACAACATTATCA 57.519 45.000 0.00 0.00 0.00 2.15
461 462 2.784347 TCACCCGCACAACATTATCAA 58.216 42.857 0.00 0.00 0.00 2.57
462 463 3.351740 TCACCCGCACAACATTATCAAT 58.648 40.909 0.00 0.00 0.00 2.57
463 464 4.518249 TCACCCGCACAACATTATCAATA 58.482 39.130 0.00 0.00 0.00 1.90
464 465 4.944317 TCACCCGCACAACATTATCAATAA 59.056 37.500 0.00 0.00 0.00 1.40
465 466 5.592282 TCACCCGCACAACATTATCAATAAT 59.408 36.000 0.00 0.00 33.44 1.28
469 470 6.272318 CCGCACAACATTATCAATAATGGTT 58.728 36.000 21.02 12.75 45.66 3.67
470 471 6.756074 CCGCACAACATTATCAATAATGGTTT 59.244 34.615 21.02 9.69 45.66 3.27
471 472 7.277539 CCGCACAACATTATCAATAATGGTTTT 59.722 33.333 21.02 8.61 45.66 2.43
472 473 8.655092 CGCACAACATTATCAATAATGGTTTTT 58.345 29.630 21.02 8.35 45.66 1.94
473 474 9.757859 GCACAACATTATCAATAATGGTTTTTG 57.242 29.630 21.02 17.88 45.66 2.44
481 482 9.770097 TTATCAATAATGGTTTTTGAAAGCACA 57.230 25.926 7.37 0.59 33.45 4.57
482 483 8.851541 ATCAATAATGGTTTTTGAAAGCACAT 57.148 26.923 7.37 3.54 33.45 3.21
483 484 8.674263 TCAATAATGGTTTTTGAAAGCACATT 57.326 26.923 7.37 7.59 31.08 2.71
484 485 8.557864 TCAATAATGGTTTTTGAAAGCACATTG 58.442 29.630 21.20 21.20 36.17 2.82
485 486 8.557864 CAATAATGGTTTTTGAAAGCACATTGA 58.442 29.630 21.91 6.27 36.52 2.57
486 487 6.607735 AATGGTTTTTGAAAGCACATTGAG 57.392 33.333 7.37 0.00 0.00 3.02
487 488 5.083533 TGGTTTTTGAAAGCACATTGAGT 57.916 34.783 1.56 0.00 0.00 3.41
488 489 5.108517 TGGTTTTTGAAAGCACATTGAGTC 58.891 37.500 1.56 0.00 0.00 3.36
489 490 4.207019 GGTTTTTGAAAGCACATTGAGTCG 59.793 41.667 0.00 0.00 0.00 4.18
490 491 2.686558 TTGAAAGCACATTGAGTCGC 57.313 45.000 0.00 0.00 0.00 5.19
491 492 0.874390 TGAAAGCACATTGAGTCGCC 59.126 50.000 0.00 0.00 0.00 5.54
492 493 0.169009 GAAAGCACATTGAGTCGCCC 59.831 55.000 0.00 0.00 0.00 6.13
493 494 0.537143 AAAGCACATTGAGTCGCCCA 60.537 50.000 0.00 0.00 0.00 5.36
494 495 0.537143 AAGCACATTGAGTCGCCCAA 60.537 50.000 0.00 0.00 0.00 4.12
495 496 0.322816 AGCACATTGAGTCGCCCAAT 60.323 50.000 0.00 0.00 34.83 3.16
496 497 1.065491 AGCACATTGAGTCGCCCAATA 60.065 47.619 0.00 0.00 33.35 1.90
497 498 1.742831 GCACATTGAGTCGCCCAATAA 59.257 47.619 0.00 0.00 33.35 1.40
498 499 2.358898 GCACATTGAGTCGCCCAATAAT 59.641 45.455 0.00 0.00 33.35 1.28
499 500 3.563808 GCACATTGAGTCGCCCAATAATA 59.436 43.478 0.00 0.00 33.35 0.98
500 501 4.036262 GCACATTGAGTCGCCCAATAATAA 59.964 41.667 0.00 0.00 33.35 1.40
501 502 5.751680 CACATTGAGTCGCCCAATAATAAG 58.248 41.667 0.00 0.00 33.35 1.73
502 503 5.527214 CACATTGAGTCGCCCAATAATAAGA 59.473 40.000 0.00 0.00 33.35 2.10
503 504 5.760253 ACATTGAGTCGCCCAATAATAAGAG 59.240 40.000 0.00 0.00 33.35 2.85
504 505 5.353394 TTGAGTCGCCCAATAATAAGAGT 57.647 39.130 0.00 0.00 0.00 3.24
505 506 4.693283 TGAGTCGCCCAATAATAAGAGTG 58.307 43.478 0.00 0.00 0.00 3.51
506 507 4.161565 TGAGTCGCCCAATAATAAGAGTGT 59.838 41.667 0.00 0.00 0.00 3.55
507 508 5.361571 TGAGTCGCCCAATAATAAGAGTGTA 59.638 40.000 0.00 0.00 0.00 2.90
508 509 5.844004 AGTCGCCCAATAATAAGAGTGTAG 58.156 41.667 0.00 0.00 0.00 2.74
509 510 4.989168 GTCGCCCAATAATAAGAGTGTAGG 59.011 45.833 0.00 0.00 0.00 3.18
510 511 4.039973 TCGCCCAATAATAAGAGTGTAGGG 59.960 45.833 0.00 0.00 36.85 3.53
512 513 4.315803 CCCAATAATAAGAGTGTAGGGCG 58.684 47.826 0.00 0.00 0.00 6.13
513 514 4.202326 CCCAATAATAAGAGTGTAGGGCGT 60.202 45.833 0.00 0.00 0.00 5.68
514 515 4.989168 CCAATAATAAGAGTGTAGGGCGTC 59.011 45.833 0.00 0.00 0.00 5.19
515 516 2.865343 AATAAGAGTGTAGGGCGTCG 57.135 50.000 0.00 0.00 0.00 5.12
516 517 2.048444 ATAAGAGTGTAGGGCGTCGA 57.952 50.000 0.00 0.00 0.00 4.20
517 518 1.825090 TAAGAGTGTAGGGCGTCGAA 58.175 50.000 0.00 0.00 0.00 3.71
518 519 1.183549 AAGAGTGTAGGGCGTCGAAT 58.816 50.000 0.00 0.00 0.00 3.34
519 520 0.739561 AGAGTGTAGGGCGTCGAATC 59.260 55.000 0.00 0.00 0.00 2.52
520 521 0.454600 GAGTGTAGGGCGTCGAATCA 59.545 55.000 0.00 0.00 0.00 2.57
521 522 0.172803 AGTGTAGGGCGTCGAATCAC 59.827 55.000 0.00 0.00 0.00 3.06
522 523 0.172803 GTGTAGGGCGTCGAATCACT 59.827 55.000 0.00 0.00 0.00 3.41
523 524 1.402968 GTGTAGGGCGTCGAATCACTA 59.597 52.381 0.00 0.00 0.00 2.74
524 525 2.034305 GTGTAGGGCGTCGAATCACTAT 59.966 50.000 0.00 0.00 0.00 2.12
525 526 3.251729 GTGTAGGGCGTCGAATCACTATA 59.748 47.826 0.00 0.00 0.00 1.31
526 527 4.077108 TGTAGGGCGTCGAATCACTATAT 58.923 43.478 0.00 0.00 0.00 0.86
527 528 3.851976 AGGGCGTCGAATCACTATATC 57.148 47.619 0.00 0.00 0.00 1.63
528 529 3.422796 AGGGCGTCGAATCACTATATCT 58.577 45.455 0.00 0.00 0.00 1.98
529 530 3.827302 AGGGCGTCGAATCACTATATCTT 59.173 43.478 0.00 0.00 0.00 2.40
530 531 4.281182 AGGGCGTCGAATCACTATATCTTT 59.719 41.667 0.00 0.00 0.00 2.52
531 532 5.475909 AGGGCGTCGAATCACTATATCTTTA 59.524 40.000 0.00 0.00 0.00 1.85
532 533 6.153000 AGGGCGTCGAATCACTATATCTTTAT 59.847 38.462 0.00 0.00 0.00 1.40
533 534 6.472808 GGGCGTCGAATCACTATATCTTTATC 59.527 42.308 0.00 0.00 0.00 1.75
534 535 7.027760 GGCGTCGAATCACTATATCTTTATCA 58.972 38.462 0.00 0.00 0.00 2.15
535 536 7.702772 GGCGTCGAATCACTATATCTTTATCAT 59.297 37.037 0.00 0.00 0.00 2.45
536 537 8.527488 GCGTCGAATCACTATATCTTTATCATG 58.473 37.037 0.00 0.00 0.00 3.07
537 538 9.774742 CGTCGAATCACTATATCTTTATCATGA 57.225 33.333 0.00 0.00 0.00 3.07
551 552 8.722480 TCTTTATCATGATGTCGATGAAAAGT 57.278 30.769 18.72 0.00 34.22 2.66
552 553 9.166173 TCTTTATCATGATGTCGATGAAAAGTT 57.834 29.630 18.72 0.00 34.22 2.66
553 554 9.778993 CTTTATCATGATGTCGATGAAAAGTTT 57.221 29.630 18.72 0.00 33.59 2.66
554 555 9.773328 TTTATCATGATGTCGATGAAAAGTTTC 57.227 29.630 18.72 0.00 33.59 2.78
604 605 6.774354 AAAAATTGACACAGCAACATCATC 57.226 33.333 0.00 0.00 0.00 2.92
605 606 5.456548 AAATTGACACAGCAACATCATCA 57.543 34.783 0.00 0.00 0.00 3.07
606 607 5.456548 AATTGACACAGCAACATCATCAA 57.543 34.783 0.00 0.00 0.00 2.57
607 608 4.915158 TTGACACAGCAACATCATCAAA 57.085 36.364 0.00 0.00 0.00 2.69
608 609 5.456548 TTGACACAGCAACATCATCAAAT 57.543 34.783 0.00 0.00 0.00 2.32
609 610 5.050644 TGACACAGCAACATCATCAAATC 57.949 39.130 0.00 0.00 0.00 2.17
610 611 4.082625 TGACACAGCAACATCATCAAATCC 60.083 41.667 0.00 0.00 0.00 3.01
611 612 3.119743 ACACAGCAACATCATCAAATCCG 60.120 43.478 0.00 0.00 0.00 4.18
612 613 3.127376 CACAGCAACATCATCAAATCCGA 59.873 43.478 0.00 0.00 0.00 4.55
613 614 3.758023 ACAGCAACATCATCAAATCCGAA 59.242 39.130 0.00 0.00 0.00 4.30
614 615 4.400251 ACAGCAACATCATCAAATCCGAAT 59.600 37.500 0.00 0.00 0.00 3.34
615 616 5.589855 ACAGCAACATCATCAAATCCGAATA 59.410 36.000 0.00 0.00 0.00 1.75
616 617 6.140786 CAGCAACATCATCAAATCCGAATAG 58.859 40.000 0.00 0.00 0.00 1.73
617 618 5.824624 AGCAACATCATCAAATCCGAATAGT 59.175 36.000 0.00 0.00 0.00 2.12
618 619 6.017605 AGCAACATCATCAAATCCGAATAGTC 60.018 38.462 0.00 0.00 0.00 2.59
636 637 8.475331 GAATAGTCGAATTTACAAGGACAGAA 57.525 34.615 0.00 0.00 0.00 3.02
637 638 8.842358 AATAGTCGAATTTACAAGGACAGAAA 57.158 30.769 0.00 0.00 0.00 2.52
638 639 8.842358 ATAGTCGAATTTACAAGGACAGAAAA 57.158 30.769 0.00 0.00 0.00 2.29
639 640 7.745620 AGTCGAATTTACAAGGACAGAAAAT 57.254 32.000 0.00 0.00 0.00 1.82
640 641 8.166422 AGTCGAATTTACAAGGACAGAAAATT 57.834 30.769 0.00 0.00 33.63 1.82
641 642 8.290325 AGTCGAATTTACAAGGACAGAAAATTC 58.710 33.333 8.18 8.18 40.57 2.17
642 643 8.290325 GTCGAATTTACAAGGACAGAAAATTCT 58.710 33.333 13.72 0.00 41.25 2.40
643 644 8.504005 TCGAATTTACAAGGACAGAAAATTCTC 58.496 33.333 13.72 0.00 41.25 2.87
644 645 8.507249 CGAATTTACAAGGACAGAAAATTCTCT 58.493 33.333 13.72 0.00 41.25 3.10
648 649 8.617290 TTACAAGGACAGAAAATTCTCTAACC 57.383 34.615 0.00 0.00 34.74 2.85
649 650 6.842676 ACAAGGACAGAAAATTCTCTAACCT 58.157 36.000 1.53 1.53 34.74 3.50
650 651 6.937465 ACAAGGACAGAAAATTCTCTAACCTC 59.063 38.462 6.45 0.00 34.74 3.85
651 652 5.725362 AGGACAGAAAATTCTCTAACCTCG 58.275 41.667 1.53 0.00 34.74 4.63
652 653 5.246429 AGGACAGAAAATTCTCTAACCTCGT 59.754 40.000 1.53 0.00 34.74 4.18
653 654 5.348997 GGACAGAAAATTCTCTAACCTCGTG 59.651 44.000 0.00 0.00 34.74 4.35
654 655 5.238583 ACAGAAAATTCTCTAACCTCGTGG 58.761 41.667 0.99 0.99 34.74 4.94
655 656 4.093556 CAGAAAATTCTCTAACCTCGTGGC 59.906 45.833 2.76 0.00 34.74 5.01
656 657 3.695830 AAATTCTCTAACCTCGTGGCA 57.304 42.857 2.76 0.00 36.63 4.92
657 658 2.969628 ATTCTCTAACCTCGTGGCAG 57.030 50.000 2.76 1.39 36.63 4.85
658 659 1.629043 TTCTCTAACCTCGTGGCAGT 58.371 50.000 2.76 0.00 36.63 4.40
659 660 0.888619 TCTCTAACCTCGTGGCAGTG 59.111 55.000 2.76 2.83 36.63 3.66
660 661 0.737715 CTCTAACCTCGTGGCAGTGC 60.738 60.000 6.55 6.55 36.63 4.40
672 673 3.936585 GCAGTGCCAAAAAGAACGA 57.063 47.368 2.85 0.00 0.00 3.85
673 674 1.758783 GCAGTGCCAAAAAGAACGAG 58.241 50.000 2.85 0.00 0.00 4.18
674 675 1.333619 GCAGTGCCAAAAAGAACGAGA 59.666 47.619 2.85 0.00 0.00 4.04
675 676 2.223479 GCAGTGCCAAAAAGAACGAGAA 60.223 45.455 2.85 0.00 0.00 2.87
676 677 3.733684 GCAGTGCCAAAAAGAACGAGAAA 60.734 43.478 2.85 0.00 0.00 2.52
677 678 4.420168 CAGTGCCAAAAAGAACGAGAAAA 58.580 39.130 0.00 0.00 0.00 2.29
678 679 4.862018 CAGTGCCAAAAAGAACGAGAAAAA 59.138 37.500 0.00 0.00 0.00 1.94
679 680 5.519927 CAGTGCCAAAAAGAACGAGAAAAAT 59.480 36.000 0.00 0.00 0.00 1.82
680 681 6.035975 CAGTGCCAAAAAGAACGAGAAAAATT 59.964 34.615 0.00 0.00 0.00 1.82
681 682 6.593770 AGTGCCAAAAAGAACGAGAAAAATTT 59.406 30.769 0.00 0.00 0.00 1.82
682 683 7.762159 AGTGCCAAAAAGAACGAGAAAAATTTA 59.238 29.630 0.00 0.00 0.00 1.40
683 684 8.547894 GTGCCAAAAAGAACGAGAAAAATTTAT 58.452 29.630 0.00 0.00 0.00 1.40
684 685 9.751542 TGCCAAAAAGAACGAGAAAAATTTATA 57.248 25.926 0.00 0.00 0.00 0.98
720 721 9.996554 ACTATGGTGATCATTAAATATTGACGA 57.003 29.630 0.00 0.00 37.30 4.20
723 724 8.153479 TGGTGATCATTAAATATTGACGAAGG 57.847 34.615 0.00 0.00 0.00 3.46
724 725 7.990314 TGGTGATCATTAAATATTGACGAAGGA 59.010 33.333 0.00 0.00 0.00 3.36
725 726 9.003658 GGTGATCATTAAATATTGACGAAGGAT 57.996 33.333 0.00 0.00 0.00 3.24
753 754 8.837788 AAAAGATTTTGAAAATCTGATGTCCC 57.162 30.769 28.00 3.52 37.11 4.46
754 755 6.535963 AGATTTTGAAAATCTGATGTCCCC 57.464 37.500 27.07 2.16 35.79 4.81
755 756 5.423290 AGATTTTGAAAATCTGATGTCCCCC 59.577 40.000 27.07 1.70 35.79 5.40
756 757 2.418368 TGAAAATCTGATGTCCCCCG 57.582 50.000 0.00 0.00 0.00 5.73
757 758 1.633432 TGAAAATCTGATGTCCCCCGT 59.367 47.619 0.00 0.00 0.00 5.28
767 768 4.361971 TCCCCCGTCTCTCAGCGT 62.362 66.667 0.00 0.00 0.00 5.07
801 802 3.756434 CTGAAAGCGAGGGGACAAAAATA 59.244 43.478 0.00 0.00 0.00 1.40
803 804 3.434940 AAGCGAGGGGACAAAAATACT 57.565 42.857 0.00 0.00 0.00 2.12
804 805 2.987232 AGCGAGGGGACAAAAATACTC 58.013 47.619 0.00 0.00 0.00 2.59
808 809 4.770795 CGAGGGGACAAAAATACTCAGAT 58.229 43.478 0.00 0.00 0.00 2.90
809 810 4.572389 CGAGGGGACAAAAATACTCAGATG 59.428 45.833 0.00 0.00 0.00 2.90
810 811 5.626809 CGAGGGGACAAAAATACTCAGATGA 60.627 44.000 0.00 0.00 0.00 2.92
811 812 6.332976 AGGGGACAAAAATACTCAGATGAT 57.667 37.500 0.00 0.00 0.00 2.45
812 813 6.125029 AGGGGACAAAAATACTCAGATGATG 58.875 40.000 0.00 0.00 0.00 3.07
813 814 6.069440 AGGGGACAAAAATACTCAGATGATGA 60.069 38.462 0.00 0.00 36.21 2.92
814 815 6.038714 GGGGACAAAAATACTCAGATGATGAC 59.961 42.308 0.00 0.00 33.22 3.06
815 816 6.599244 GGGACAAAAATACTCAGATGATGACA 59.401 38.462 0.00 0.00 33.22 3.58
816 817 7.121168 GGGACAAAAATACTCAGATGATGACAA 59.879 37.037 0.00 0.00 33.22 3.18
817 818 8.180267 GGACAAAAATACTCAGATGATGACAAG 58.820 37.037 0.00 0.00 33.22 3.16
818 819 8.853077 ACAAAAATACTCAGATGATGACAAGA 57.147 30.769 0.00 0.00 33.22 3.02
819 820 8.944029 ACAAAAATACTCAGATGATGACAAGAG 58.056 33.333 0.00 0.00 33.22 2.85
822 823 2.159128 ACTCAGATGATGACAAGAGCGG 60.159 50.000 0.00 0.00 33.22 5.52
850 852 2.191641 CCTGCTAGCCCCTTGAGC 59.808 66.667 13.29 0.00 36.72 4.26
851 853 2.202987 CTGCTAGCCCCTTGAGCG 60.203 66.667 13.29 0.00 39.14 5.03
852 854 4.473520 TGCTAGCCCCTTGAGCGC 62.474 66.667 13.29 0.00 39.14 5.92
855 857 3.746949 CTAGCCCCTTGAGCGCCAG 62.747 68.421 2.29 0.00 34.64 4.85
859 861 3.058160 CCCTTGAGCGCCAGGTTG 61.058 66.667 14.94 0.00 0.00 3.77
861 863 2.032528 CTTGAGCGCCAGGTTGGA 59.967 61.111 2.29 0.00 40.96 3.53
863 865 2.738213 CTTGAGCGCCAGGTTGGAGT 62.738 60.000 2.29 0.00 40.96 3.85
864 866 1.476845 TTGAGCGCCAGGTTGGAGTA 61.477 55.000 2.29 0.00 40.96 2.59
865 867 1.448013 GAGCGCCAGGTTGGAGTAC 60.448 63.158 2.29 0.00 40.96 2.73
867 869 1.078426 GCGCCAGGTTGGAGTACAT 60.078 57.895 0.00 0.00 40.96 2.29
868 870 1.090052 GCGCCAGGTTGGAGTACATC 61.090 60.000 0.00 0.00 40.96 3.06
869 871 0.537188 CGCCAGGTTGGAGTACATCT 59.463 55.000 0.00 0.00 40.96 2.90
870 872 1.471676 CGCCAGGTTGGAGTACATCTC 60.472 57.143 0.00 0.00 40.96 2.75
871 873 1.555075 GCCAGGTTGGAGTACATCTCA 59.445 52.381 0.00 0.00 44.40 3.27
873 875 3.742640 GCCAGGTTGGAGTACATCTCATC 60.743 52.174 0.00 0.00 44.40 2.92
874 876 3.708631 CCAGGTTGGAGTACATCTCATCT 59.291 47.826 0.00 0.00 44.40 2.90
875 877 4.202202 CCAGGTTGGAGTACATCTCATCTC 60.202 50.000 0.00 0.00 44.40 2.75
876 878 4.648762 CAGGTTGGAGTACATCTCATCTCT 59.351 45.833 0.00 0.00 44.40 3.10
880 882 6.719370 GGTTGGAGTACATCTCATCTCTCTAT 59.281 42.308 0.00 0.00 44.40 1.98
881 883 7.885922 GGTTGGAGTACATCTCATCTCTCTATA 59.114 40.741 0.00 0.00 44.40 1.31
882 884 8.726988 GTTGGAGTACATCTCATCTCTCTATAC 58.273 40.741 0.00 0.00 44.40 1.47
883 885 7.100409 TGGAGTACATCTCATCTCTCTATACG 58.900 42.308 0.00 0.00 44.40 3.06
884 886 7.038941 TGGAGTACATCTCATCTCTCTATACGA 60.039 40.741 0.00 0.00 44.40 3.43
885 887 7.491372 GGAGTACATCTCATCTCTCTATACGAG 59.509 44.444 0.00 0.00 44.40 4.18
886 888 8.129496 AGTACATCTCATCTCTCTATACGAGA 57.871 38.462 0.00 0.00 46.32 4.04
939 1528 4.410400 CCCTCGTGGCCCAAGACC 62.410 72.222 0.00 0.00 0.00 3.85
949 1538 2.361610 CCAAGACCGGGCAGCATT 60.362 61.111 11.69 0.00 0.00 3.56
950 1539 2.409870 CCAAGACCGGGCAGCATTC 61.410 63.158 11.69 0.00 0.00 2.67
964 1554 0.949105 GCATTCGTAGGGTATGGGCG 60.949 60.000 0.00 0.00 0.00 6.13
1116 1711 4.693532 GTGCTCCACCACATCGAA 57.306 55.556 0.00 0.00 35.80 3.71
1119 1714 1.374252 GCTCCACCACATCGAACGT 60.374 57.895 0.00 0.00 0.00 3.99
1215 1810 1.913762 CACCCTCCTCTCCAACCGT 60.914 63.158 0.00 0.00 0.00 4.83
1219 1814 1.658686 CCTCCTCTCCAACCGTCTCG 61.659 65.000 0.00 0.00 0.00 4.04
1365 1960 4.021925 GACGCCCTCCACCTGCTT 62.022 66.667 0.00 0.00 0.00 3.91
1395 1990 2.048127 GCCTCCTCTCGCAACGTT 60.048 61.111 0.00 0.00 0.00 3.99
1456 2051 2.654079 CGGCAGAGGGAAGCACTCT 61.654 63.158 0.00 0.00 45.77 3.24
1584 2179 1.445095 GCCACTCCGAGAGATGCAT 59.555 57.895 0.00 0.00 32.97 3.96
1713 2308 0.689080 AGATGAGCATCCGGGACACT 60.689 55.000 0.00 0.00 38.58 3.55
1759 2354 1.974875 TACTGCCGTGCGAAGAGGA 60.975 57.895 0.00 0.00 0.00 3.71
2098 2693 2.034558 ACTGCCATGTTAGTGTTTGCAC 59.965 45.455 0.00 0.00 45.57 4.57
2626 3221 3.463704 GGGGATTATGAAGGAGAAGGGTT 59.536 47.826 0.00 0.00 0.00 4.11
2630 3225 6.187682 GGATTATGAAGGAGAAGGGTTTGAA 58.812 40.000 0.00 0.00 0.00 2.69
2663 3258 1.375908 GCAGTTGGATCGAGGTGCA 60.376 57.895 8.05 0.00 0.00 4.57
2985 3580 0.679002 TTGAGGCAGCAATCTCAGGC 60.679 55.000 0.00 0.00 40.55 4.85
3362 3960 5.847715 CAGTATGTTTGAAACTACTGCGAG 58.152 41.667 22.33 9.50 36.87 5.03
3375 3973 2.192608 CTGCGAGGCCTTTTGCTCAC 62.193 60.000 21.51 0.93 40.92 3.51
3426 4024 4.283337 TCCCGTGTTATCATAGGAAGTGA 58.717 43.478 0.00 0.00 0.00 3.41
3510 4108 6.560003 TTAAGGGATGATCTCTTAGCAACA 57.440 37.500 13.94 0.00 40.26 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.809196 AGCTGAATCGTTTGTTTGTTTTAACA 59.191 30.769 0.00 0.00 36.30 2.41
1 2 7.008810 TCAGCTGAATCGTTTGTTTGTTTTAAC 59.991 33.333 15.67 0.00 0.00 2.01
2 3 7.008810 GTCAGCTGAATCGTTTGTTTGTTTTAA 59.991 33.333 20.19 0.00 0.00 1.52
3 4 6.470877 GTCAGCTGAATCGTTTGTTTGTTTTA 59.529 34.615 20.19 0.00 0.00 1.52
4 5 5.288472 GTCAGCTGAATCGTTTGTTTGTTTT 59.712 36.000 20.19 0.00 0.00 2.43
5 6 4.798387 GTCAGCTGAATCGTTTGTTTGTTT 59.202 37.500 20.19 0.00 0.00 2.83
6 7 4.096382 AGTCAGCTGAATCGTTTGTTTGTT 59.904 37.500 20.19 0.00 0.00 2.83
7 8 3.627577 AGTCAGCTGAATCGTTTGTTTGT 59.372 39.130 20.19 0.00 0.00 2.83
8 9 4.214980 AGTCAGCTGAATCGTTTGTTTG 57.785 40.909 20.19 0.00 0.00 2.93
9 10 4.900635 AAGTCAGCTGAATCGTTTGTTT 57.099 36.364 20.19 0.00 0.00 2.83
10 11 5.527582 AGTTAAGTCAGCTGAATCGTTTGTT 59.472 36.000 20.19 2.41 0.00 2.83
11 12 5.057149 AGTTAAGTCAGCTGAATCGTTTGT 58.943 37.500 20.19 3.23 0.00 2.83
12 13 5.597813 AGTTAAGTCAGCTGAATCGTTTG 57.402 39.130 20.19 0.00 0.00 2.93
13 14 6.313905 CCATAGTTAAGTCAGCTGAATCGTTT 59.686 38.462 20.19 4.47 0.00 3.60
14 15 5.812642 CCATAGTTAAGTCAGCTGAATCGTT 59.187 40.000 20.19 12.02 0.00 3.85
15 16 5.127194 TCCATAGTTAAGTCAGCTGAATCGT 59.873 40.000 20.19 5.71 0.00 3.73
16 17 5.460419 GTCCATAGTTAAGTCAGCTGAATCG 59.540 44.000 20.19 0.00 0.00 3.34
17 18 5.460419 CGTCCATAGTTAAGTCAGCTGAATC 59.540 44.000 20.19 7.16 0.00 2.52
18 19 5.127194 TCGTCCATAGTTAAGTCAGCTGAAT 59.873 40.000 20.19 15.89 0.00 2.57
19 20 4.461431 TCGTCCATAGTTAAGTCAGCTGAA 59.539 41.667 20.19 0.00 0.00 3.02
20 21 4.014406 TCGTCCATAGTTAAGTCAGCTGA 58.986 43.478 13.74 13.74 0.00 4.26
21 22 4.106197 GTCGTCCATAGTTAAGTCAGCTG 58.894 47.826 7.63 7.63 0.00 4.24
22 23 3.181499 CGTCGTCCATAGTTAAGTCAGCT 60.181 47.826 0.00 0.00 0.00 4.24
23 24 3.106672 CGTCGTCCATAGTTAAGTCAGC 58.893 50.000 0.00 0.00 0.00 4.26
24 25 3.488721 CCCGTCGTCCATAGTTAAGTCAG 60.489 52.174 0.00 0.00 0.00 3.51
25 26 2.424601 CCCGTCGTCCATAGTTAAGTCA 59.575 50.000 0.00 0.00 0.00 3.41
26 27 2.424956 ACCCGTCGTCCATAGTTAAGTC 59.575 50.000 0.00 0.00 0.00 3.01
27 28 2.450476 ACCCGTCGTCCATAGTTAAGT 58.550 47.619 0.00 0.00 0.00 2.24
28 29 3.119388 TCAACCCGTCGTCCATAGTTAAG 60.119 47.826 0.00 0.00 0.00 1.85
29 30 2.824936 TCAACCCGTCGTCCATAGTTAA 59.175 45.455 0.00 0.00 0.00 2.01
30 31 2.445427 TCAACCCGTCGTCCATAGTTA 58.555 47.619 0.00 0.00 0.00 2.24
31 32 1.259609 TCAACCCGTCGTCCATAGTT 58.740 50.000 0.00 0.00 0.00 2.24
32 33 1.481871 ATCAACCCGTCGTCCATAGT 58.518 50.000 0.00 0.00 0.00 2.12
33 34 2.596904 AATCAACCCGTCGTCCATAG 57.403 50.000 0.00 0.00 0.00 2.23
34 35 2.759535 TGTAATCAACCCGTCGTCCATA 59.240 45.455 0.00 0.00 0.00 2.74
35 36 1.551430 TGTAATCAACCCGTCGTCCAT 59.449 47.619 0.00 0.00 0.00 3.41
36 37 0.967662 TGTAATCAACCCGTCGTCCA 59.032 50.000 0.00 0.00 0.00 4.02
37 38 1.931172 CATGTAATCAACCCGTCGTCC 59.069 52.381 0.00 0.00 0.00 4.79
38 39 2.883574 TCATGTAATCAACCCGTCGTC 58.116 47.619 0.00 0.00 0.00 4.20
39 40 3.322211 TTCATGTAATCAACCCGTCGT 57.678 42.857 0.00 0.00 0.00 4.34
40 41 4.094294 ACATTTCATGTAATCAACCCGTCG 59.906 41.667 0.00 0.00 42.78 5.12
41 42 5.560966 ACATTTCATGTAATCAACCCGTC 57.439 39.130 0.00 0.00 42.78 4.79
42 43 4.094294 CGACATTTCATGTAATCAACCCGT 59.906 41.667 0.00 0.00 45.03 5.28
43 44 4.495679 CCGACATTTCATGTAATCAACCCG 60.496 45.833 0.00 0.00 45.03 5.28
44 45 4.202010 CCCGACATTTCATGTAATCAACCC 60.202 45.833 0.00 0.00 45.03 4.11
45 46 4.202010 CCCCGACATTTCATGTAATCAACC 60.202 45.833 0.00 0.00 45.03 3.77
46 47 4.398044 ACCCCGACATTTCATGTAATCAAC 59.602 41.667 0.00 0.00 45.03 3.18
47 48 4.594970 ACCCCGACATTTCATGTAATCAA 58.405 39.130 0.00 0.00 45.03 2.57
48 49 4.229304 ACCCCGACATTTCATGTAATCA 57.771 40.909 0.00 0.00 45.03 2.57
49 50 5.576447 AAACCCCGACATTTCATGTAATC 57.424 39.130 0.00 0.00 45.03 1.75
50 51 5.993748 AAAACCCCGACATTTCATGTAAT 57.006 34.783 0.00 0.00 45.03 1.89
51 52 5.793030 AAAAACCCCGACATTTCATGTAA 57.207 34.783 0.00 0.00 45.03 2.41
99 100 7.551262 GTGTCATTTTACAAAAAGGAAACCCTT 59.449 33.333 8.27 0.00 45.61 3.95
100 101 7.045416 GTGTCATTTTACAAAAAGGAAACCCT 58.955 34.615 8.27 0.00 34.97 4.34
101 102 6.019398 CGTGTCATTTTACAAAAAGGAAACCC 60.019 38.462 12.12 0.00 0.00 4.11
102 103 6.752815 TCGTGTCATTTTACAAAAAGGAAACC 59.247 34.615 12.12 0.00 0.00 3.27
103 104 7.512426 CGTCGTGTCATTTTACAAAAAGGAAAC 60.512 37.037 9.10 9.10 0.00 2.78
104 105 6.469595 CGTCGTGTCATTTTACAAAAAGGAAA 59.530 34.615 1.52 0.00 0.00 3.13
105 106 5.966503 CGTCGTGTCATTTTACAAAAAGGAA 59.033 36.000 1.52 0.00 0.00 3.36
106 107 5.503498 CGTCGTGTCATTTTACAAAAAGGA 58.497 37.500 0.00 0.00 0.00 3.36
107 108 4.673311 CCGTCGTGTCATTTTACAAAAAGG 59.327 41.667 0.00 0.00 0.00 3.11
108 109 5.170625 CACCGTCGTGTCATTTTACAAAAAG 59.829 40.000 0.00 0.00 35.10 2.27
109 110 5.029014 CACCGTCGTGTCATTTTACAAAAA 58.971 37.500 0.00 0.00 35.10 1.94
110 111 4.331992 TCACCGTCGTGTCATTTTACAAAA 59.668 37.500 0.00 0.00 41.09 2.44
111 112 3.869832 TCACCGTCGTGTCATTTTACAAA 59.130 39.130 0.00 0.00 41.09 2.83
112 113 3.455327 TCACCGTCGTGTCATTTTACAA 58.545 40.909 0.00 0.00 41.09 2.41
113 114 3.054166 CTCACCGTCGTGTCATTTTACA 58.946 45.455 0.00 0.00 41.09 2.41
114 115 2.159881 GCTCACCGTCGTGTCATTTTAC 60.160 50.000 0.00 0.00 41.09 2.01
115 116 2.063266 GCTCACCGTCGTGTCATTTTA 58.937 47.619 0.00 0.00 41.09 1.52
116 117 0.865769 GCTCACCGTCGTGTCATTTT 59.134 50.000 0.00 0.00 41.09 1.82
117 118 0.249699 TGCTCACCGTCGTGTCATTT 60.250 50.000 0.00 0.00 41.09 2.32
118 119 0.667487 CTGCTCACCGTCGTGTCATT 60.667 55.000 0.00 0.00 41.09 2.57
119 120 1.080501 CTGCTCACCGTCGTGTCAT 60.081 57.895 0.00 0.00 41.09 3.06
120 121 2.335011 CTGCTCACCGTCGTGTCA 59.665 61.111 0.00 0.00 41.09 3.58
121 122 2.430921 CCTGCTCACCGTCGTGTC 60.431 66.667 0.00 0.00 41.09 3.67
122 123 4.664677 GCCTGCTCACCGTCGTGT 62.665 66.667 0.00 0.00 41.09 4.49
123 124 4.662961 TGCCTGCTCACCGTCGTG 62.663 66.667 0.00 0.00 41.72 4.35
124 125 3.454587 TTTGCCTGCTCACCGTCGT 62.455 57.895 0.00 0.00 0.00 4.34
125 126 2.664851 TTTGCCTGCTCACCGTCG 60.665 61.111 0.00 0.00 0.00 5.12
126 127 2.970974 GCTTTGCCTGCTCACCGTC 61.971 63.158 0.00 0.00 0.00 4.79
127 128 2.980233 GCTTTGCCTGCTCACCGT 60.980 61.111 0.00 0.00 0.00 4.83
128 129 2.979676 TGCTTTGCCTGCTCACCG 60.980 61.111 0.00 0.00 0.00 4.94
129 130 1.458639 AAGTGCTTTGCCTGCTCACC 61.459 55.000 0.00 0.00 0.00 4.02
130 131 0.039708 GAAGTGCTTTGCCTGCTCAC 60.040 55.000 0.00 0.00 0.00 3.51
131 132 1.509644 CGAAGTGCTTTGCCTGCTCA 61.510 55.000 0.00 0.00 0.00 4.26
132 133 1.208614 CGAAGTGCTTTGCCTGCTC 59.791 57.895 0.00 0.00 0.00 4.26
133 134 1.526917 ACGAAGTGCTTTGCCTGCT 60.527 52.632 0.00 0.00 42.51 4.24
134 135 3.034030 ACGAAGTGCTTTGCCTGC 58.966 55.556 0.00 0.00 42.51 4.85
146 147 7.534085 TGTGACCTAATAATAAAGCACGAAG 57.466 36.000 0.00 0.00 0.00 3.79
147 148 7.908827 TTGTGACCTAATAATAAAGCACGAA 57.091 32.000 0.00 0.00 0.00 3.85
148 149 9.602568 TTATTGTGACCTAATAATAAAGCACGA 57.397 29.630 0.00 0.00 0.00 4.35
157 158 9.106070 GGTCGTTCTTTATTGTGACCTAATAAT 57.894 33.333 2.09 0.00 42.00 1.28
158 159 8.095792 TGGTCGTTCTTTATTGTGACCTAATAA 58.904 33.333 10.22 0.00 44.77 1.40
159 160 7.546667 GTGGTCGTTCTTTATTGTGACCTAATA 59.453 37.037 10.22 0.00 44.77 0.98
160 161 6.370718 GTGGTCGTTCTTTATTGTGACCTAAT 59.629 38.462 10.22 0.00 44.77 1.73
161 162 5.697633 GTGGTCGTTCTTTATTGTGACCTAA 59.302 40.000 10.22 0.00 44.77 2.69
162 163 5.221481 TGTGGTCGTTCTTTATTGTGACCTA 60.221 40.000 10.22 0.00 44.77 3.08
163 164 4.062991 GTGGTCGTTCTTTATTGTGACCT 58.937 43.478 10.22 0.00 44.77 3.85
164 165 3.810941 TGTGGTCGTTCTTTATTGTGACC 59.189 43.478 2.34 2.34 44.75 4.02
165 166 5.607119 ATGTGGTCGTTCTTTATTGTGAC 57.393 39.130 0.00 0.00 0.00 3.67
166 167 6.370442 CCTTATGTGGTCGTTCTTTATTGTGA 59.630 38.462 0.00 0.00 0.00 3.58
167 168 6.148811 ACCTTATGTGGTCGTTCTTTATTGTG 59.851 38.462 0.00 0.00 34.86 3.33
168 169 6.235664 ACCTTATGTGGTCGTTCTTTATTGT 58.764 36.000 0.00 0.00 34.86 2.71
169 170 6.737254 ACCTTATGTGGTCGTTCTTTATTG 57.263 37.500 0.00 0.00 34.86 1.90
170 171 7.332678 GTGTACCTTATGTGGTCGTTCTTTATT 59.667 37.037 0.00 0.00 41.22 1.40
171 172 6.815142 GTGTACCTTATGTGGTCGTTCTTTAT 59.185 38.462 0.00 0.00 41.22 1.40
172 173 6.158598 GTGTACCTTATGTGGTCGTTCTTTA 58.841 40.000 0.00 0.00 41.22 1.85
173 174 4.992951 GTGTACCTTATGTGGTCGTTCTTT 59.007 41.667 0.00 0.00 41.22 2.52
174 175 4.562143 GGTGTACCTTATGTGGTCGTTCTT 60.562 45.833 0.00 0.00 41.22 2.52
175 176 3.056322 GGTGTACCTTATGTGGTCGTTCT 60.056 47.826 0.00 0.00 41.22 3.01
176 177 3.056322 AGGTGTACCTTATGTGGTCGTTC 60.056 47.826 0.00 0.00 46.09 3.95
177 178 2.901839 AGGTGTACCTTATGTGGTCGTT 59.098 45.455 0.00 0.00 46.09 3.85
178 179 2.532843 AGGTGTACCTTATGTGGTCGT 58.467 47.619 0.00 0.00 46.09 4.34
184 185 9.080097 GAGTATCAATAGAGGTGTACCTTATGT 57.920 37.037 4.84 0.00 40.49 2.29
185 186 9.078990 TGAGTATCAATAGAGGTGTACCTTATG 57.921 37.037 4.84 3.12 45.97 1.90
311 312 9.965902 AGAGGTTTCATTGTAATTCTTAGTCAT 57.034 29.630 0.00 0.00 0.00 3.06
312 313 9.793259 AAGAGGTTTCATTGTAATTCTTAGTCA 57.207 29.630 4.87 0.00 0.00 3.41
322 323 9.802039 AGGTGTTTATAAGAGGTTTCATTGTAA 57.198 29.630 0.00 0.00 0.00 2.41
323 324 9.802039 AAGGTGTTTATAAGAGGTTTCATTGTA 57.198 29.630 0.00 0.00 0.00 2.41
324 325 8.706322 AAGGTGTTTATAAGAGGTTTCATTGT 57.294 30.769 0.00 0.00 0.00 2.71
325 326 9.981114 AAAAGGTGTTTATAAGAGGTTTCATTG 57.019 29.630 0.00 0.00 0.00 2.82
349 350 5.390461 CGAACAGAGATTGATACCGCAAAAA 60.390 40.000 0.00 0.00 0.00 1.94
350 351 4.092821 CGAACAGAGATTGATACCGCAAAA 59.907 41.667 0.00 0.00 0.00 2.44
351 352 3.616821 CGAACAGAGATTGATACCGCAAA 59.383 43.478 0.00 0.00 0.00 3.68
352 353 3.119280 TCGAACAGAGATTGATACCGCAA 60.119 43.478 0.00 0.00 0.00 4.85
353 354 2.425668 TCGAACAGAGATTGATACCGCA 59.574 45.455 0.00 0.00 0.00 5.69
354 355 3.079960 TCGAACAGAGATTGATACCGC 57.920 47.619 0.00 0.00 0.00 5.68
355 356 6.403333 TTTTTCGAACAGAGATTGATACCG 57.597 37.500 0.00 0.00 0.00 4.02
381 382 9.057089 CAACCTCTTTATCAAAGTCTTTGTAGT 57.943 33.333 21.81 13.14 41.36 2.73
382 383 9.057089 ACAACCTCTTTATCAAAGTCTTTGTAG 57.943 33.333 21.81 15.24 41.36 2.74
383 384 8.974060 ACAACCTCTTTATCAAAGTCTTTGTA 57.026 30.769 21.81 12.41 41.36 2.41
384 385 7.881775 ACAACCTCTTTATCAAAGTCTTTGT 57.118 32.000 21.81 13.24 41.36 2.83
393 394 9.667107 CCAGTCTAATTACAACCTCTTTATCAA 57.333 33.333 0.00 0.00 0.00 2.57
394 395 9.042450 TCCAGTCTAATTACAACCTCTTTATCA 57.958 33.333 0.00 0.00 0.00 2.15
395 396 9.535878 CTCCAGTCTAATTACAACCTCTTTATC 57.464 37.037 0.00 0.00 0.00 1.75
396 397 9.047947 ACTCCAGTCTAATTACAACCTCTTTAT 57.952 33.333 0.00 0.00 0.00 1.40
397 398 8.431910 ACTCCAGTCTAATTACAACCTCTTTA 57.568 34.615 0.00 0.00 0.00 1.85
398 399 7.317722 ACTCCAGTCTAATTACAACCTCTTT 57.682 36.000 0.00 0.00 0.00 2.52
399 400 6.936968 ACTCCAGTCTAATTACAACCTCTT 57.063 37.500 0.00 0.00 0.00 2.85
400 401 7.362747 CGTTACTCCAGTCTAATTACAACCTCT 60.363 40.741 0.00 0.00 0.00 3.69
401 402 6.750963 CGTTACTCCAGTCTAATTACAACCTC 59.249 42.308 0.00 0.00 0.00 3.85
402 403 6.435277 TCGTTACTCCAGTCTAATTACAACCT 59.565 38.462 0.00 0.00 0.00 3.50
403 404 6.624423 TCGTTACTCCAGTCTAATTACAACC 58.376 40.000 0.00 0.00 0.00 3.77
404 405 9.962783 ATATCGTTACTCCAGTCTAATTACAAC 57.037 33.333 0.00 0.00 0.00 3.32
406 407 9.961265 CAATATCGTTACTCCAGTCTAATTACA 57.039 33.333 0.00 0.00 0.00 2.41
407 408 9.962783 ACAATATCGTTACTCCAGTCTAATTAC 57.037 33.333 0.00 0.00 0.00 1.89
409 410 8.692710 TGACAATATCGTTACTCCAGTCTAATT 58.307 33.333 0.00 0.00 0.00 1.40
410 411 8.136165 GTGACAATATCGTTACTCCAGTCTAAT 58.864 37.037 0.00 0.00 0.00 1.73
411 412 7.338703 AGTGACAATATCGTTACTCCAGTCTAA 59.661 37.037 0.00 0.00 30.50 2.10
412 413 6.827251 AGTGACAATATCGTTACTCCAGTCTA 59.173 38.462 0.00 0.00 30.50 2.59
413 414 5.652891 AGTGACAATATCGTTACTCCAGTCT 59.347 40.000 0.00 0.00 30.50 3.24
414 415 5.892568 AGTGACAATATCGTTACTCCAGTC 58.107 41.667 0.00 0.00 30.50 3.51
415 416 5.892568 GAGTGACAATATCGTTACTCCAGT 58.107 41.667 7.35 0.00 43.27 4.00
420 421 6.812160 GGTGAAAGAGTGACAATATCGTTACT 59.188 38.462 0.00 0.00 38.33 2.24
421 422 6.035758 GGGTGAAAGAGTGACAATATCGTTAC 59.964 42.308 0.00 0.00 0.00 2.50
422 423 6.103997 GGGTGAAAGAGTGACAATATCGTTA 58.896 40.000 0.00 0.00 0.00 3.18
423 424 4.935808 GGGTGAAAGAGTGACAATATCGTT 59.064 41.667 0.00 0.00 0.00 3.85
424 425 4.504858 GGGTGAAAGAGTGACAATATCGT 58.495 43.478 0.00 0.00 0.00 3.73
425 426 3.551890 CGGGTGAAAGAGTGACAATATCG 59.448 47.826 0.00 0.00 0.00 2.92
426 427 3.309954 GCGGGTGAAAGAGTGACAATATC 59.690 47.826 0.00 0.00 0.00 1.63
427 428 3.270877 GCGGGTGAAAGAGTGACAATAT 58.729 45.455 0.00 0.00 0.00 1.28
428 429 2.037902 TGCGGGTGAAAGAGTGACAATA 59.962 45.455 0.00 0.00 0.00 1.90
429 430 1.202758 TGCGGGTGAAAGAGTGACAAT 60.203 47.619 0.00 0.00 0.00 2.71
430 431 0.179234 TGCGGGTGAAAGAGTGACAA 59.821 50.000 0.00 0.00 0.00 3.18
431 432 0.531974 GTGCGGGTGAAAGAGTGACA 60.532 55.000 0.00 0.00 0.00 3.58
432 433 0.531974 TGTGCGGGTGAAAGAGTGAC 60.532 55.000 0.00 0.00 0.00 3.67
433 434 0.179234 TTGTGCGGGTGAAAGAGTGA 59.821 50.000 0.00 0.00 0.00 3.41
434 435 0.307760 GTTGTGCGGGTGAAAGAGTG 59.692 55.000 0.00 0.00 0.00 3.51
435 436 0.107410 TGTTGTGCGGGTGAAAGAGT 60.107 50.000 0.00 0.00 0.00 3.24
436 437 1.238439 ATGTTGTGCGGGTGAAAGAG 58.762 50.000 0.00 0.00 0.00 2.85
437 438 1.686355 AATGTTGTGCGGGTGAAAGA 58.314 45.000 0.00 0.00 0.00 2.52
438 439 3.190327 TGATAATGTTGTGCGGGTGAAAG 59.810 43.478 0.00 0.00 0.00 2.62
439 440 3.149981 TGATAATGTTGTGCGGGTGAAA 58.850 40.909 0.00 0.00 0.00 2.69
440 441 2.784347 TGATAATGTTGTGCGGGTGAA 58.216 42.857 0.00 0.00 0.00 3.18
441 442 2.481289 TGATAATGTTGTGCGGGTGA 57.519 45.000 0.00 0.00 0.00 4.02
442 443 3.781079 ATTGATAATGTTGTGCGGGTG 57.219 42.857 0.00 0.00 0.00 4.61
443 444 5.221224 CCATTATTGATAATGTTGTGCGGGT 60.221 40.000 17.78 0.00 45.03 5.28
444 445 5.221224 ACCATTATTGATAATGTTGTGCGGG 60.221 40.000 17.78 6.85 45.03 6.13
445 446 5.830912 ACCATTATTGATAATGTTGTGCGG 58.169 37.500 17.78 7.38 45.03 5.69
446 447 7.754069 AAACCATTATTGATAATGTTGTGCG 57.246 32.000 17.78 7.83 45.03 5.34
447 448 9.757859 CAAAAACCATTATTGATAATGTTGTGC 57.242 29.630 17.78 0.00 45.03 4.57
455 456 9.770097 TGTGCTTTCAAAAACCATTATTGATAA 57.230 25.926 0.00 0.00 33.45 1.75
456 457 9.941325 ATGTGCTTTCAAAAACCATTATTGATA 57.059 25.926 0.00 0.00 33.45 2.15
457 458 8.851541 ATGTGCTTTCAAAAACCATTATTGAT 57.148 26.923 0.00 0.00 33.45 2.57
458 459 8.557864 CAATGTGCTTTCAAAAACCATTATTGA 58.442 29.630 0.00 0.00 0.00 2.57
459 460 8.557864 TCAATGTGCTTTCAAAAACCATTATTG 58.442 29.630 0.00 0.00 0.00 1.90
460 461 8.674263 TCAATGTGCTTTCAAAAACCATTATT 57.326 26.923 0.00 0.00 0.00 1.40
461 462 7.933033 ACTCAATGTGCTTTCAAAAACCATTAT 59.067 29.630 0.00 0.00 0.00 1.28
462 463 7.271511 ACTCAATGTGCTTTCAAAAACCATTA 58.728 30.769 0.00 0.00 0.00 1.90
463 464 6.114767 ACTCAATGTGCTTTCAAAAACCATT 58.885 32.000 0.00 0.00 0.00 3.16
464 465 5.673514 ACTCAATGTGCTTTCAAAAACCAT 58.326 33.333 0.00 0.00 0.00 3.55
465 466 5.083533 ACTCAATGTGCTTTCAAAAACCA 57.916 34.783 0.00 0.00 0.00 3.67
466 467 4.207019 CGACTCAATGTGCTTTCAAAAACC 59.793 41.667 0.00 0.00 0.00 3.27
467 468 4.317348 GCGACTCAATGTGCTTTCAAAAAC 60.317 41.667 0.00 0.00 0.00 2.43
468 469 3.796178 GCGACTCAATGTGCTTTCAAAAA 59.204 39.130 0.00 0.00 0.00 1.94
469 470 3.371168 GCGACTCAATGTGCTTTCAAAA 58.629 40.909 0.00 0.00 0.00 2.44
470 471 2.287547 GGCGACTCAATGTGCTTTCAAA 60.288 45.455 0.00 0.00 0.00 2.69
471 472 1.266718 GGCGACTCAATGTGCTTTCAA 59.733 47.619 0.00 0.00 0.00 2.69
472 473 0.874390 GGCGACTCAATGTGCTTTCA 59.126 50.000 0.00 0.00 0.00 2.69
473 474 0.169009 GGGCGACTCAATGTGCTTTC 59.831 55.000 0.00 0.00 0.00 2.62
474 475 0.537143 TGGGCGACTCAATGTGCTTT 60.537 50.000 0.00 0.00 0.00 3.51
475 476 0.537143 TTGGGCGACTCAATGTGCTT 60.537 50.000 0.00 0.00 0.00 3.91
476 477 0.322816 ATTGGGCGACTCAATGTGCT 60.323 50.000 4.41 0.00 34.01 4.40
477 478 1.378531 TATTGGGCGACTCAATGTGC 58.621 50.000 13.36 0.00 36.40 4.57
478 479 5.527214 TCTTATTATTGGGCGACTCAATGTG 59.473 40.000 13.36 2.35 36.40 3.21
479 480 5.680619 TCTTATTATTGGGCGACTCAATGT 58.319 37.500 13.36 6.41 36.40 2.71
480 481 5.760253 ACTCTTATTATTGGGCGACTCAATG 59.240 40.000 13.36 0.00 36.40 2.82
481 482 5.760253 CACTCTTATTATTGGGCGACTCAAT 59.240 40.000 9.49 9.49 38.29 2.57
482 483 5.116180 CACTCTTATTATTGGGCGACTCAA 58.884 41.667 0.00 0.00 0.00 3.02
483 484 4.161565 ACACTCTTATTATTGGGCGACTCA 59.838 41.667 0.00 0.00 0.00 3.41
484 485 4.694339 ACACTCTTATTATTGGGCGACTC 58.306 43.478 0.00 0.00 0.00 3.36
485 486 4.755266 ACACTCTTATTATTGGGCGACT 57.245 40.909 0.00 0.00 0.00 4.18
486 487 4.989168 CCTACACTCTTATTATTGGGCGAC 59.011 45.833 0.00 0.00 0.00 5.19
487 488 4.039973 CCCTACACTCTTATTATTGGGCGA 59.960 45.833 0.00 0.00 0.00 5.54
488 489 4.315803 CCCTACACTCTTATTATTGGGCG 58.684 47.826 0.00 0.00 0.00 6.13
490 491 4.202326 ACGCCCTACACTCTTATTATTGGG 60.202 45.833 0.00 0.00 35.47 4.12
491 492 4.957296 ACGCCCTACACTCTTATTATTGG 58.043 43.478 0.00 0.00 0.00 3.16
492 493 4.680110 CGACGCCCTACACTCTTATTATTG 59.320 45.833 0.00 0.00 0.00 1.90
493 494 4.581824 TCGACGCCCTACACTCTTATTATT 59.418 41.667 0.00 0.00 0.00 1.40
494 495 4.139786 TCGACGCCCTACACTCTTATTAT 58.860 43.478 0.00 0.00 0.00 1.28
495 496 3.544684 TCGACGCCCTACACTCTTATTA 58.455 45.455 0.00 0.00 0.00 0.98
496 497 2.372264 TCGACGCCCTACACTCTTATT 58.628 47.619 0.00 0.00 0.00 1.40
497 498 2.048444 TCGACGCCCTACACTCTTAT 57.952 50.000 0.00 0.00 0.00 1.73
498 499 1.825090 TTCGACGCCCTACACTCTTA 58.175 50.000 0.00 0.00 0.00 2.10
499 500 1.134560 GATTCGACGCCCTACACTCTT 59.865 52.381 0.00 0.00 0.00 2.85
500 501 0.739561 GATTCGACGCCCTACACTCT 59.260 55.000 0.00 0.00 0.00 3.24
501 502 0.454600 TGATTCGACGCCCTACACTC 59.545 55.000 0.00 0.00 0.00 3.51
502 503 0.172803 GTGATTCGACGCCCTACACT 59.827 55.000 0.00 0.00 0.00 3.55
503 504 0.172803 AGTGATTCGACGCCCTACAC 59.827 55.000 0.00 0.00 0.00 2.90
504 505 1.753930 TAGTGATTCGACGCCCTACA 58.246 50.000 0.00 0.00 0.00 2.74
505 506 4.395542 AGATATAGTGATTCGACGCCCTAC 59.604 45.833 0.00 0.00 0.00 3.18
506 507 4.586884 AGATATAGTGATTCGACGCCCTA 58.413 43.478 0.00 0.00 0.00 3.53
507 508 3.422796 AGATATAGTGATTCGACGCCCT 58.577 45.455 0.00 0.00 0.00 5.19
508 509 3.851976 AGATATAGTGATTCGACGCCC 57.148 47.619 0.00 0.00 0.00 6.13
509 510 7.027760 TGATAAAGATATAGTGATTCGACGCC 58.972 38.462 0.00 0.00 0.00 5.68
510 511 8.527488 CATGATAAAGATATAGTGATTCGACGC 58.473 37.037 0.00 0.00 0.00 5.19
511 512 9.774742 TCATGATAAAGATATAGTGATTCGACG 57.225 33.333 0.00 0.00 0.00 5.12
525 526 9.334947 ACTTTTCATCGACATCATGATAAAGAT 57.665 29.630 21.61 16.56 35.17 2.40
526 527 8.722480 ACTTTTCATCGACATCATGATAAAGA 57.278 30.769 21.61 15.41 35.17 2.52
527 528 9.778993 AAACTTTTCATCGACATCATGATAAAG 57.221 29.630 8.15 13.53 36.18 1.85
528 529 9.773328 GAAACTTTTCATCGACATCATGATAAA 57.227 29.630 8.15 0.62 37.15 1.40
529 530 8.945057 TGAAACTTTTCATCGACATCATGATAA 58.055 29.630 8.15 0.00 41.88 1.75
530 531 8.491331 TGAAACTTTTCATCGACATCATGATA 57.509 30.769 8.15 0.00 41.88 2.15
531 532 7.381766 TGAAACTTTTCATCGACATCATGAT 57.618 32.000 1.18 1.18 41.88 2.45
532 533 6.799926 TGAAACTTTTCATCGACATCATGA 57.200 33.333 0.00 0.00 41.88 3.07
581 582 6.282167 TGATGATGTTGCTGTGTCAATTTTT 58.718 32.000 0.00 0.00 0.00 1.94
582 583 5.845103 TGATGATGTTGCTGTGTCAATTTT 58.155 33.333 0.00 0.00 0.00 1.82
583 584 5.456548 TGATGATGTTGCTGTGTCAATTT 57.543 34.783 0.00 0.00 0.00 1.82
584 585 5.456548 TTGATGATGTTGCTGTGTCAATT 57.543 34.783 0.00 0.00 0.00 2.32
585 586 5.456548 TTTGATGATGTTGCTGTGTCAAT 57.543 34.783 0.00 0.00 0.00 2.57
586 587 4.915158 TTTGATGATGTTGCTGTGTCAA 57.085 36.364 0.00 0.00 0.00 3.18
587 588 4.082625 GGATTTGATGATGTTGCTGTGTCA 60.083 41.667 0.00 0.00 0.00 3.58
588 589 4.418392 GGATTTGATGATGTTGCTGTGTC 58.582 43.478 0.00 0.00 0.00 3.67
589 590 3.119743 CGGATTTGATGATGTTGCTGTGT 60.120 43.478 0.00 0.00 0.00 3.72
590 591 3.127376 TCGGATTTGATGATGTTGCTGTG 59.873 43.478 0.00 0.00 0.00 3.66
591 592 3.346315 TCGGATTTGATGATGTTGCTGT 58.654 40.909 0.00 0.00 0.00 4.40
592 593 4.359971 TTCGGATTTGATGATGTTGCTG 57.640 40.909 0.00 0.00 0.00 4.41
593 594 5.824624 ACTATTCGGATTTGATGATGTTGCT 59.175 36.000 0.00 0.00 0.00 3.91
594 595 6.064846 ACTATTCGGATTTGATGATGTTGC 57.935 37.500 0.00 0.00 0.00 4.17
595 596 6.200854 TCGACTATTCGGATTTGATGATGTTG 59.799 38.462 2.41 0.00 45.90 3.33
596 597 6.280643 TCGACTATTCGGATTTGATGATGTT 58.719 36.000 2.41 0.00 45.90 2.71
597 598 5.842907 TCGACTATTCGGATTTGATGATGT 58.157 37.500 2.41 0.00 45.90 3.06
598 599 6.769608 TTCGACTATTCGGATTTGATGATG 57.230 37.500 2.41 0.00 45.90 3.07
607 608 6.700520 GTCCTTGTAAATTCGACTATTCGGAT 59.299 38.462 2.41 0.00 46.10 4.18
608 609 6.038356 GTCCTTGTAAATTCGACTATTCGGA 58.962 40.000 2.41 0.00 45.90 4.55
609 610 5.808540 TGTCCTTGTAAATTCGACTATTCGG 59.191 40.000 2.41 0.00 45.90 4.30
611 612 8.475331 TTCTGTCCTTGTAAATTCGACTATTC 57.525 34.615 0.00 0.00 0.00 1.75
612 613 8.842358 TTTCTGTCCTTGTAAATTCGACTATT 57.158 30.769 0.00 0.00 0.00 1.73
613 614 8.842358 TTTTCTGTCCTTGTAAATTCGACTAT 57.158 30.769 0.00 0.00 0.00 2.12
614 615 8.842358 ATTTTCTGTCCTTGTAAATTCGACTA 57.158 30.769 0.00 0.00 0.00 2.59
615 616 7.745620 ATTTTCTGTCCTTGTAAATTCGACT 57.254 32.000 0.00 0.00 0.00 4.18
616 617 8.290325 AGAATTTTCTGTCCTTGTAAATTCGAC 58.710 33.333 0.00 0.00 44.16 4.20
617 618 8.391075 AGAATTTTCTGTCCTTGTAAATTCGA 57.609 30.769 0.00 0.00 44.16 3.71
618 619 8.507249 AGAGAATTTTCTGTCCTTGTAAATTCG 58.493 33.333 0.00 0.00 44.16 3.34
622 623 9.063615 GGTTAGAGAATTTTCTGTCCTTGTAAA 57.936 33.333 8.71 0.00 37.73 2.01
623 624 8.437575 AGGTTAGAGAATTTTCTGTCCTTGTAA 58.562 33.333 8.71 0.00 37.73 2.41
624 625 7.974504 AGGTTAGAGAATTTTCTGTCCTTGTA 58.025 34.615 8.71 0.00 37.73 2.41
625 626 6.842676 AGGTTAGAGAATTTTCTGTCCTTGT 58.157 36.000 8.71 0.00 37.73 3.16
626 627 6.091441 CGAGGTTAGAGAATTTTCTGTCCTTG 59.909 42.308 18.01 17.26 37.73 3.61
627 628 6.166982 CGAGGTTAGAGAATTTTCTGTCCTT 58.833 40.000 18.01 8.11 37.73 3.36
628 629 5.246429 ACGAGGTTAGAGAATTTTCTGTCCT 59.754 40.000 17.40 17.40 37.73 3.85
629 630 5.348997 CACGAGGTTAGAGAATTTTCTGTCC 59.651 44.000 8.71 10.05 37.73 4.02
630 631 5.348997 CCACGAGGTTAGAGAATTTTCTGTC 59.651 44.000 8.71 2.06 37.73 3.51
631 632 5.238583 CCACGAGGTTAGAGAATTTTCTGT 58.761 41.667 8.71 0.00 37.73 3.41
632 633 4.093556 GCCACGAGGTTAGAGAATTTTCTG 59.906 45.833 8.71 0.00 35.80 3.02
633 634 4.254492 GCCACGAGGTTAGAGAATTTTCT 58.746 43.478 3.71 3.71 37.47 2.52
634 635 4.000988 TGCCACGAGGTTAGAGAATTTTC 58.999 43.478 0.00 0.00 37.19 2.29
635 636 4.003648 CTGCCACGAGGTTAGAGAATTTT 58.996 43.478 0.00 0.00 37.19 1.82
636 637 3.008049 ACTGCCACGAGGTTAGAGAATTT 59.992 43.478 11.05 0.00 37.19 1.82
637 638 2.567615 ACTGCCACGAGGTTAGAGAATT 59.432 45.455 11.05 0.00 37.19 2.17
638 639 2.093973 CACTGCCACGAGGTTAGAGAAT 60.094 50.000 11.05 0.00 37.19 2.40
639 640 1.272490 CACTGCCACGAGGTTAGAGAA 59.728 52.381 11.05 0.00 37.19 2.87
640 641 0.888619 CACTGCCACGAGGTTAGAGA 59.111 55.000 11.05 0.00 37.19 3.10
641 642 0.737715 GCACTGCCACGAGGTTAGAG 60.738 60.000 11.05 5.64 37.19 2.43
642 643 1.292223 GCACTGCCACGAGGTTAGA 59.708 57.895 11.05 0.00 37.19 2.10
643 644 3.876300 GCACTGCCACGAGGTTAG 58.124 61.111 0.00 2.40 37.19 2.34
654 655 1.333619 TCTCGTTCTTTTTGGCACTGC 59.666 47.619 0.00 0.00 0.00 4.40
655 656 3.691049 TTCTCGTTCTTTTTGGCACTG 57.309 42.857 0.00 0.00 0.00 3.66
656 657 4.712122 TTTTCTCGTTCTTTTTGGCACT 57.288 36.364 0.00 0.00 0.00 4.40
657 658 5.966636 ATTTTTCTCGTTCTTTTTGGCAC 57.033 34.783 0.00 0.00 0.00 5.01
658 659 6.976636 AAATTTTTCTCGTTCTTTTTGGCA 57.023 29.167 0.00 0.00 0.00 4.92
694 695 9.996554 TCGTCAATATTTAATGATCACCATAGT 57.003 29.630 0.00 0.00 34.45 2.12
697 698 8.786898 CCTTCGTCAATATTTAATGATCACCAT 58.213 33.333 0.00 0.00 36.99 3.55
698 699 7.990314 TCCTTCGTCAATATTTAATGATCACCA 59.010 33.333 0.00 0.00 0.00 4.17
699 700 8.378172 TCCTTCGTCAATATTTAATGATCACC 57.622 34.615 0.00 0.00 0.00 4.02
727 728 9.927668 GGGACATCAGATTTTCAAAATCTTTTA 57.072 29.630 20.80 11.10 34.96 1.52
728 729 7.879677 GGGGACATCAGATTTTCAAAATCTTTT 59.120 33.333 20.80 9.88 34.96 2.27
729 730 7.389232 GGGGACATCAGATTTTCAAAATCTTT 58.611 34.615 20.80 10.20 34.96 2.52
730 731 6.070596 GGGGGACATCAGATTTTCAAAATCTT 60.071 38.462 20.80 8.36 34.96 2.40
731 732 5.423290 GGGGGACATCAGATTTTCAAAATCT 59.577 40.000 18.17 18.17 37.47 2.40
732 733 5.664457 GGGGGACATCAGATTTTCAAAATC 58.336 41.667 14.15 14.15 0.00 2.17
733 734 4.160252 CGGGGGACATCAGATTTTCAAAAT 59.840 41.667 0.00 0.00 0.00 1.82
734 735 3.509575 CGGGGGACATCAGATTTTCAAAA 59.490 43.478 0.00 0.00 0.00 2.44
735 736 3.088532 CGGGGGACATCAGATTTTCAAA 58.911 45.455 0.00 0.00 0.00 2.69
736 737 2.041081 ACGGGGGACATCAGATTTTCAA 59.959 45.455 0.00 0.00 0.00 2.69
737 738 1.633432 ACGGGGGACATCAGATTTTCA 59.367 47.619 0.00 0.00 0.00 2.69
738 739 2.092914 AGACGGGGGACATCAGATTTTC 60.093 50.000 0.00 0.00 0.00 2.29
739 740 1.916181 AGACGGGGGACATCAGATTTT 59.084 47.619 0.00 0.00 0.00 1.82
740 741 1.486726 GAGACGGGGGACATCAGATTT 59.513 52.381 0.00 0.00 0.00 2.17
741 742 1.123928 GAGACGGGGGACATCAGATT 58.876 55.000 0.00 0.00 0.00 2.40
742 743 0.263172 AGAGACGGGGGACATCAGAT 59.737 55.000 0.00 0.00 0.00 2.90
743 744 0.395862 GAGAGACGGGGGACATCAGA 60.396 60.000 0.00 0.00 0.00 3.27
744 745 0.684479 TGAGAGACGGGGGACATCAG 60.684 60.000 0.00 0.00 0.00 2.90
745 746 0.684479 CTGAGAGACGGGGGACATCA 60.684 60.000 0.00 0.00 0.00 3.07
746 747 2.022240 GCTGAGAGACGGGGGACATC 62.022 65.000 0.00 0.00 0.00 3.06
747 748 2.060980 GCTGAGAGACGGGGGACAT 61.061 63.158 0.00 0.00 0.00 3.06
748 749 2.680352 GCTGAGAGACGGGGGACA 60.680 66.667 0.00 0.00 0.00 4.02
749 750 3.827898 CGCTGAGAGACGGGGGAC 61.828 72.222 0.00 0.00 34.71 4.46
750 751 4.361971 ACGCTGAGAGACGGGGGA 62.362 66.667 0.00 0.00 41.32 4.81
751 752 3.827898 GACGCTGAGAGACGGGGG 61.828 72.222 0.00 0.00 41.32 5.40
752 753 2.549611 CTTGACGCTGAGAGACGGGG 62.550 65.000 0.00 0.00 42.47 5.73
753 754 1.153939 CTTGACGCTGAGAGACGGG 60.154 63.158 0.00 0.00 0.00 5.28
754 755 1.153939 CCTTGACGCTGAGAGACGG 60.154 63.158 0.00 0.00 0.00 4.79
755 756 0.730834 CACCTTGACGCTGAGAGACG 60.731 60.000 0.00 0.00 0.00 4.18
756 757 0.389166 CCACCTTGACGCTGAGAGAC 60.389 60.000 0.00 0.00 0.00 3.36
757 758 1.967535 CCACCTTGACGCTGAGAGA 59.032 57.895 0.00 0.00 0.00 3.10
767 768 1.174712 GCTTTCAGCTGCCACCTTGA 61.175 55.000 9.47 0.00 38.45 3.02
801 802 2.159128 CCGCTCTTGTCATCATCTGAGT 60.159 50.000 0.00 0.00 33.51 3.41
803 804 1.827344 ACCGCTCTTGTCATCATCTGA 59.173 47.619 0.00 0.00 0.00 3.27
804 805 2.306341 ACCGCTCTTGTCATCATCTG 57.694 50.000 0.00 0.00 0.00 2.90
808 809 1.132453 CTCGTACCGCTCTTGTCATCA 59.868 52.381 0.00 0.00 0.00 3.07
809 810 1.400846 TCTCGTACCGCTCTTGTCATC 59.599 52.381 0.00 0.00 0.00 2.92
810 811 1.460504 TCTCGTACCGCTCTTGTCAT 58.539 50.000 0.00 0.00 0.00 3.06
811 812 1.241165 TTCTCGTACCGCTCTTGTCA 58.759 50.000 0.00 0.00 0.00 3.58
812 813 1.984297 GTTTCTCGTACCGCTCTTGTC 59.016 52.381 0.00 0.00 0.00 3.18
813 814 1.336609 GGTTTCTCGTACCGCTCTTGT 60.337 52.381 0.00 0.00 0.00 3.16
814 815 1.347320 GGTTTCTCGTACCGCTCTTG 58.653 55.000 0.00 0.00 0.00 3.02
815 816 0.245813 GGGTTTCTCGTACCGCTCTT 59.754 55.000 0.00 0.00 36.49 2.85
816 817 0.611340 AGGGTTTCTCGTACCGCTCT 60.611 55.000 0.00 0.00 36.49 4.09
817 818 0.458025 CAGGGTTTCTCGTACCGCTC 60.458 60.000 0.00 0.00 36.49 5.03
818 819 1.590147 CAGGGTTTCTCGTACCGCT 59.410 57.895 0.00 0.00 36.49 5.52
819 820 2.098831 GCAGGGTTTCTCGTACCGC 61.099 63.158 0.00 0.00 36.49 5.68
822 823 1.471153 GGCTAGCAGGGTTTCTCGTAC 60.471 57.143 18.24 0.00 0.00 3.67
829 830 1.140134 TCAAGGGGCTAGCAGGGTTT 61.140 55.000 18.24 0.24 0.00 3.27
850 852 0.537188 AGATGTACTCCAACCTGGCG 59.463 55.000 0.00 0.00 37.47 5.69
851 853 1.555075 TGAGATGTACTCCAACCTGGC 59.445 52.381 0.00 0.00 44.34 4.85
852 854 3.708631 AGATGAGATGTACTCCAACCTGG 59.291 47.826 0.00 0.00 44.34 4.45
853 855 4.648762 AGAGATGAGATGTACTCCAACCTG 59.351 45.833 0.00 0.00 44.34 4.00
855 857 4.892934 AGAGAGATGAGATGTACTCCAACC 59.107 45.833 0.00 0.00 44.34 3.77
856 858 7.759489 ATAGAGAGATGAGATGTACTCCAAC 57.241 40.000 0.00 0.00 44.34 3.77
857 859 7.604545 CGTATAGAGAGATGAGATGTACTCCAA 59.395 40.741 0.00 0.00 44.34 3.53
859 861 7.324935 TCGTATAGAGAGATGAGATGTACTCC 58.675 42.308 0.00 0.00 44.34 3.85
875 877 8.538492 AGTGAAACCGTGCTTCTCGTATAGAG 62.538 46.154 0.00 0.00 43.33 2.43
876 878 3.441222 TGAAACCGTGCTTCTCGTATAGA 59.559 43.478 0.00 0.00 0.00 1.98
880 882 1.338973 AGTGAAACCGTGCTTCTCGTA 59.661 47.619 0.00 0.00 37.80 3.43
881 883 0.104304 AGTGAAACCGTGCTTCTCGT 59.896 50.000 0.00 0.00 37.80 4.18
882 884 1.217882 AAGTGAAACCGTGCTTCTCG 58.782 50.000 0.00 0.00 37.80 4.04
883 885 2.612212 TGAAAGTGAAACCGTGCTTCTC 59.388 45.455 0.00 0.00 37.80 2.87
884 886 2.639065 TGAAAGTGAAACCGTGCTTCT 58.361 42.857 0.00 0.00 37.80 2.85
885 887 3.105937 GTTGAAAGTGAAACCGTGCTTC 58.894 45.455 0.00 0.00 37.80 3.86
886 888 2.159296 GGTTGAAAGTGAAACCGTGCTT 60.159 45.455 0.00 0.00 37.80 3.91
887 889 1.404035 GGTTGAAAGTGAAACCGTGCT 59.596 47.619 0.00 0.00 37.80 4.40
939 1528 2.023414 TACCCTACGAATGCTGCCCG 62.023 60.000 0.00 0.67 0.00 6.13
949 1538 3.228759 GCCGCCCATACCCTACGA 61.229 66.667 0.00 0.00 0.00 3.43
950 1539 4.309950 GGCCGCCCATACCCTACG 62.310 72.222 0.00 0.00 0.00 3.51
1105 1700 1.298157 ATGGCACGTTCGATGTGGTG 61.298 55.000 17.02 9.88 35.71 4.17
1109 1704 0.460284 GGAGATGGCACGTTCGATGT 60.460 55.000 0.00 0.00 0.00 3.06
1116 1711 4.082523 CCCACGGAGATGGCACGT 62.083 66.667 0.00 0.00 42.17 4.49
1215 1810 2.172372 GGCGTAGAGCTCGACGAGA 61.172 63.158 41.24 9.97 45.59 4.04
1275 1870 1.146263 GGCATTCCTGTACGGGAGG 59.854 63.158 22.52 19.06 36.66 4.30
1371 1966 2.906458 CGAGAGGAGGCAGGCATT 59.094 61.111 0.00 0.00 0.00 3.56
1381 1976 1.135199 GGATACAACGTTGCGAGAGGA 60.135 52.381 27.61 0.00 0.00 3.71
1452 2047 2.029073 CGGGCGAACACACAGAGT 59.971 61.111 0.00 0.00 0.00 3.24
1456 2051 2.897846 CAACCGGGCGAACACACA 60.898 61.111 6.32 0.00 0.00 3.72
1542 2137 4.802051 GCTCCCATCCCAGCGCAA 62.802 66.667 11.47 0.00 0.00 4.85
1584 2179 4.367023 GACACCACTACCGCGCCA 62.367 66.667 0.00 0.00 0.00 5.69
1666 2261 4.436998 CGTCCTGGCGTCCTCCAC 62.437 72.222 2.94 0.00 31.74 4.02
1759 2354 2.502492 CCCGGACTGCCTCATCGAT 61.502 63.158 0.73 0.00 0.00 3.59
2098 2693 2.511600 GTCCCGTTCAGGCATCCG 60.512 66.667 0.00 0.00 39.21 4.18
2328 2923 3.567478 ATGAAGGAGGCATAGTGTTCC 57.433 47.619 0.00 0.00 0.00 3.62
2494 3089 0.250770 AAAAGGGACTCCGCCACTTC 60.251 55.000 0.00 0.00 38.49 3.01
2626 3221 1.956477 GCAAGCTTGGTCCTTCTTCAA 59.044 47.619 27.10 0.00 0.00 2.69
2630 3225 0.475906 ACTGCAAGCTTGGTCCTTCT 59.524 50.000 27.10 0.00 37.60 2.85
2663 3258 2.294233 ACAAACATGTGCTTCGCATTCT 59.706 40.909 0.00 0.00 41.91 2.40
2985 3580 7.578310 AATGGATCAAATCATACTGGTTCTG 57.422 36.000 0.00 0.00 0.00 3.02
3362 3960 4.454728 TGATTTATGTGAGCAAAAGGCC 57.545 40.909 0.00 0.00 46.50 5.19
3375 3973 5.163581 CCCTTTGGCTCTCAGTTGATTTATG 60.164 44.000 0.00 0.00 0.00 1.90
3416 4014 8.708378 TCATTTATCTCACATGTCACTTCCTAT 58.292 33.333 0.00 0.00 0.00 2.57
3426 4024 6.060136 CCACCTCATCATTTATCTCACATGT 58.940 40.000 0.00 0.00 0.00 3.21
3695 4293 1.009829 GTCAGTAATGCCAAGCCTCG 58.990 55.000 0.00 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.