Multiple sequence alignment - TraesCS5D01G135600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G135600 chr5D 100.000 2579 0 0 505 3083 216097946 216100524 0.000000e+00 4763
1 TraesCS5D01G135600 chr5D 100.000 149 0 0 1 149 216097442 216097590 3.030000e-70 276
2 TraesCS5D01G135600 chr5D 97.315 149 4 0 1 149 434606249 434606101 1.420000e-63 254
3 TraesCS5D01G135600 chr5D 97.315 149 3 1 1 149 422940140 422939993 5.100000e-63 252
4 TraesCS5D01G135600 chr5D 97.297 148 4 0 2 149 482573595 482573448 5.100000e-63 252
5 TraesCS5D01G135600 chr5D 95.302 149 7 0 1 149 254524068 254523920 1.430000e-58 237
6 TraesCS5D01G135600 chr5B 96.064 1067 28 3 1011 2067 232213941 232215003 0.000000e+00 1725
7 TraesCS5D01G135600 chr5B 93.478 276 11 5 2814 3083 232217841 232218115 1.330000e-108 403
8 TraesCS5D01G135600 chr5B 94.444 252 7 2 745 996 232213495 232213739 6.240000e-102 381
9 TraesCS5D01G135600 chr5B 84.519 239 36 1 2580 2818 647386076 647385839 5.140000e-58 235
10 TraesCS5D01G135600 chr5A 93.452 901 36 9 744 1636 285305817 285306702 0.000000e+00 1315
11 TraesCS5D01G135600 chr5A 93.066 274 17 2 2099 2372 564602001 564601730 1.720000e-107 399
12 TraesCS5D01G135600 chr5A 90.438 251 17 4 745 993 285214306 285214551 1.070000e-84 324
13 TraesCS5D01G135600 chr5A 89.520 229 5 4 1890 2100 285306803 285307030 3.920000e-69 272
14 TraesCS5D01G135600 chr5A 89.506 162 15 2 2355 2514 285307025 285307186 1.450000e-48 204
15 TraesCS5D01G135600 chr5A 97.345 113 3 0 1597 1709 285306697 285306809 3.140000e-45 193
16 TraesCS5D01G135600 chr5A 95.652 115 5 0 2821 2935 285307218 285307332 5.250000e-43 185
17 TraesCS5D01G135600 chr7D 97.701 261 6 0 2099 2359 205550241 205549981 1.690000e-122 449
18 TraesCS5D01G135600 chr7D 93.985 266 15 1 2095 2360 96378650 96378914 4.790000e-108 401
19 TraesCS5D01G135600 chr7D 85.356 239 35 0 2580 2818 195476256 195476494 6.600000e-62 248
20 TraesCS5D01G135600 chr7D 95.973 149 6 0 1 149 631383136 631382988 3.070000e-60 243
21 TraesCS5D01G135600 chr2D 94.340 265 15 0 2098 2362 647763361 647763097 1.030000e-109 407
22 TraesCS5D01G135600 chr2D 92.937 269 17 2 2099 2366 406640043 406639776 1.040000e-104 390
23 TraesCS5D01G135600 chr2D 86.404 228 25 6 2593 2818 423351319 423351542 8.540000e-61 244
24 TraesCS5D01G135600 chr2D 95.333 150 6 1 1 149 40204818 40204967 1.430000e-58 237
25 TraesCS5D01G135600 chr6D 94.275 262 15 0 2099 2360 203349128 203349389 4.790000e-108 401
26 TraesCS5D01G135600 chr6D 97.315 149 4 0 1 149 348659032 348658884 1.420000e-63 254
27 TraesCS5D01G135600 chr4A 93.893 262 16 0 2098 2359 374622553 374622292 2.230000e-106 396
28 TraesCS5D01G135600 chr4A 75.421 712 116 39 1265 1933 478742911 478743606 1.080000e-74 291
29 TraesCS5D01G135600 chrUn 93.536 263 17 0 2097 2359 24270133 24269871 2.880000e-105 392
30 TraesCS5D01G135600 chr7B 93.561 264 16 1 2097 2360 39930780 39930518 2.880000e-105 392
31 TraesCS5D01G135600 chr4D 95.973 149 6 0 1 149 61122718 61122866 3.070000e-60 243
32 TraesCS5D01G135600 chr3D 95.973 149 6 0 1 149 401681687 401681539 3.070000e-60 243
33 TraesCS5D01G135600 chr2A 84.337 249 35 4 2573 2821 9107193 9106949 1.100000e-59 241
34 TraesCS5D01G135600 chr2B 84.583 240 36 1 2580 2819 718486448 718486210 1.430000e-58 237
35 TraesCS5D01G135600 chr2B 84.322 236 37 0 2580 2815 44891260 44891495 6.650000e-57 231
36 TraesCS5D01G135600 chr6B 83.750 240 39 0 2580 2819 583242094 583242333 8.600000e-56 228
37 TraesCS5D01G135600 chr3B 83.750 240 39 0 2580 2819 451184488 451184727 8.600000e-56 228
38 TraesCS5D01G135600 chr1B 83.607 244 36 4 2577 2818 499203422 499203663 3.090000e-55 226


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G135600 chr5D 216097442 216100524 3082 False 2519.500000 4763 100.000 1 3083 2 chr5D.!!$F1 3082
1 TraesCS5D01G135600 chr5B 232213495 232218115 4620 False 836.333333 1725 94.662 745 3083 3 chr5B.!!$F1 2338
2 TraesCS5D01G135600 chr5A 285305817 285307332 1515 False 433.800000 1315 93.095 744 2935 5 chr5A.!!$F2 2191
3 TraesCS5D01G135600 chr4A 478742911 478743606 695 False 291.000000 291 75.421 1265 1933 1 chr4A.!!$F1 668

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
115 116 0.036388 CTCCCTAAAGCCACGAAGCA 60.036 55.0 0.00 0.00 34.23 3.91 F
116 117 0.036388 TCCCTAAAGCCACGAAGCAG 60.036 55.0 0.00 0.00 34.23 4.24 F
117 118 0.036388 CCCTAAAGCCACGAAGCAGA 60.036 55.0 0.00 0.00 34.23 4.26 F
656 657 0.107017 TGGATGCTAGCTGCCCTTTC 60.107 55.0 17.23 1.74 42.00 2.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1764 2233 0.102481 TTCGCCTCCATCTTACGCTC 59.898 55.0 0.0 0.0 0.0 5.03 R
1765 2234 0.103208 CTTCGCCTCCATCTTACGCT 59.897 55.0 0.0 0.0 0.0 5.07 R
1784 2253 0.105039 CCTGATCCGTGCTTACCTCC 59.895 60.0 0.0 0.0 0.0 4.30 R
2538 3026 0.115745 AACCCCTTACCTCCGACTGA 59.884 55.0 0.0 0.0 0.0 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.540735 CCGAAACGGGCCCGCTAT 62.541 66.667 43.58 29.39 44.15 2.97
24 25 3.269347 CGAAACGGGCCCGCTATG 61.269 66.667 43.58 26.82 44.19 2.23
25 26 3.583086 GAAACGGGCCCGCTATGC 61.583 66.667 43.58 25.03 44.19 3.14
47 48 4.034258 CCGCCACACTGCAGCAAG 62.034 66.667 15.27 6.75 0.00 4.01
48 49 4.695231 CGCCACACTGCAGCAAGC 62.695 66.667 15.27 11.00 45.96 4.01
49 50 4.353437 GCCACACTGCAGCAAGCC 62.353 66.667 15.27 0.00 44.83 4.35
50 51 4.034258 CCACACTGCAGCAAGCCG 62.034 66.667 15.27 0.00 44.83 5.52
51 52 4.034258 CACACTGCAGCAAGCCGG 62.034 66.667 15.27 0.00 44.83 6.13
81 82 4.790962 CAGCACCCTGCCGCTCAT 62.791 66.667 0.00 0.00 46.52 2.90
82 83 4.479993 AGCACCCTGCCGCTCATC 62.480 66.667 0.00 0.00 46.52 2.92
84 85 4.457496 CACCCTGCCGCTCATCGT 62.457 66.667 0.00 0.00 36.19 3.73
85 86 4.148825 ACCCTGCCGCTCATCGTC 62.149 66.667 0.00 0.00 36.19 4.20
86 87 3.842923 CCCTGCCGCTCATCGTCT 61.843 66.667 0.00 0.00 36.19 4.18
87 88 2.279120 CCTGCCGCTCATCGTCTC 60.279 66.667 0.00 0.00 36.19 3.36
88 89 2.780094 CCTGCCGCTCATCGTCTCT 61.780 63.158 0.00 0.00 36.19 3.10
89 90 1.299014 CTGCCGCTCATCGTCTCTC 60.299 63.158 0.00 0.00 36.19 3.20
90 91 2.026879 GCCGCTCATCGTCTCTCC 59.973 66.667 0.00 0.00 36.19 3.71
91 92 2.725008 CCGCTCATCGTCTCTCCC 59.275 66.667 0.00 0.00 36.19 4.30
92 93 2.725008 CGCTCATCGTCTCTCCCC 59.275 66.667 0.00 0.00 0.00 4.81
93 94 2.851071 CGCTCATCGTCTCTCCCCC 61.851 68.421 0.00 0.00 0.00 5.40
94 95 2.851071 GCTCATCGTCTCTCCCCCG 61.851 68.421 0.00 0.00 0.00 5.73
95 96 2.833582 TCATCGTCTCTCCCCCGC 60.834 66.667 0.00 0.00 0.00 6.13
96 97 3.917760 CATCGTCTCTCCCCCGCC 61.918 72.222 0.00 0.00 0.00 6.13
97 98 4.144727 ATCGTCTCTCCCCCGCCT 62.145 66.667 0.00 0.00 0.00 5.52
98 99 4.816984 TCGTCTCTCCCCCGCCTC 62.817 72.222 0.00 0.00 0.00 4.70
102 103 3.834056 CTCTCCCCCGCCTCCCTA 61.834 72.222 0.00 0.00 0.00 3.53
103 104 3.361447 TCTCCCCCGCCTCCCTAA 61.361 66.667 0.00 0.00 0.00 2.69
104 105 2.366435 CTCCCCCGCCTCCCTAAA 60.366 66.667 0.00 0.00 0.00 1.85
105 106 2.366435 TCCCCCGCCTCCCTAAAG 60.366 66.667 0.00 0.00 0.00 1.85
106 107 4.191015 CCCCCGCCTCCCTAAAGC 62.191 72.222 0.00 0.00 0.00 3.51
107 108 4.191015 CCCCGCCTCCCTAAAGCC 62.191 72.222 0.00 0.00 0.00 4.35
108 109 3.407967 CCCGCCTCCCTAAAGCCA 61.408 66.667 0.00 0.00 0.00 4.75
109 110 2.124695 CCGCCTCCCTAAAGCCAC 60.125 66.667 0.00 0.00 0.00 5.01
110 111 2.511600 CGCCTCCCTAAAGCCACG 60.512 66.667 0.00 0.00 0.00 4.94
111 112 2.987125 GCCTCCCTAAAGCCACGA 59.013 61.111 0.00 0.00 0.00 4.35
112 113 1.298667 GCCTCCCTAAAGCCACGAA 59.701 57.895 0.00 0.00 0.00 3.85
113 114 0.744771 GCCTCCCTAAAGCCACGAAG 60.745 60.000 0.00 0.00 0.00 3.79
114 115 0.744771 CCTCCCTAAAGCCACGAAGC 60.745 60.000 0.00 0.00 0.00 3.86
115 116 0.036388 CTCCCTAAAGCCACGAAGCA 60.036 55.000 0.00 0.00 34.23 3.91
116 117 0.036388 TCCCTAAAGCCACGAAGCAG 60.036 55.000 0.00 0.00 34.23 4.24
117 118 0.036388 CCCTAAAGCCACGAAGCAGA 60.036 55.000 0.00 0.00 34.23 4.26
118 119 1.079503 CCTAAAGCCACGAAGCAGAC 58.920 55.000 0.00 0.00 34.23 3.51
119 120 1.079503 CTAAAGCCACGAAGCAGACC 58.920 55.000 0.00 0.00 34.23 3.85
120 121 0.321298 TAAAGCCACGAAGCAGACCC 60.321 55.000 0.00 0.00 34.23 4.46
121 122 3.883744 AAGCCACGAAGCAGACCCG 62.884 63.158 0.00 0.00 34.23 5.28
544 545 3.760035 GACGGCGGCAGAGAGGAA 61.760 66.667 8.47 0.00 0.00 3.36
545 546 3.708220 GACGGCGGCAGAGAGGAAG 62.708 68.421 8.47 0.00 0.00 3.46
546 547 4.521062 CGGCGGCAGAGAGGAAGG 62.521 72.222 10.53 0.00 0.00 3.46
547 548 4.168291 GGCGGCAGAGAGGAAGGG 62.168 72.222 3.07 0.00 0.00 3.95
548 549 4.168291 GCGGCAGAGAGGAAGGGG 62.168 72.222 0.00 0.00 0.00 4.79
549 550 3.474570 CGGCAGAGAGGAAGGGGG 61.475 72.222 0.00 0.00 0.00 5.40
550 551 2.041265 GGCAGAGAGGAAGGGGGA 59.959 66.667 0.00 0.00 0.00 4.81
551 552 2.069430 GGCAGAGAGGAAGGGGGAG 61.069 68.421 0.00 0.00 0.00 4.30
552 553 2.069430 GCAGAGAGGAAGGGGGAGG 61.069 68.421 0.00 0.00 0.00 4.30
553 554 1.383803 CAGAGAGGAAGGGGGAGGG 60.384 68.421 0.00 0.00 0.00 4.30
554 555 1.550374 AGAGAGGAAGGGGGAGGGA 60.550 63.158 0.00 0.00 0.00 4.20
555 556 1.074850 GAGAGGAAGGGGGAGGGAG 60.075 68.421 0.00 0.00 0.00 4.30
556 557 1.550374 AGAGGAAGGGGGAGGGAGA 60.550 63.158 0.00 0.00 0.00 3.71
557 558 1.074850 GAGGAAGGGGGAGGGAGAG 60.075 68.421 0.00 0.00 0.00 3.20
558 559 2.040359 GGAAGGGGGAGGGAGAGG 60.040 72.222 0.00 0.00 0.00 3.69
559 560 2.770475 GAAGGGGGAGGGAGAGGC 60.770 72.222 0.00 0.00 0.00 4.70
560 561 4.806339 AAGGGGGAGGGAGAGGCG 62.806 72.222 0.00 0.00 0.00 5.52
623 624 2.277628 GCGGTCGCGAGAGAGAAG 60.278 66.667 10.24 0.00 42.92 2.85
624 625 2.751913 GCGGTCGCGAGAGAGAAGA 61.752 63.158 10.24 0.00 42.92 2.87
625 626 1.350319 CGGTCGCGAGAGAGAAGAG 59.650 63.158 10.24 0.00 42.92 2.85
626 627 1.725066 GGTCGCGAGAGAGAAGAGG 59.275 63.158 10.24 0.00 42.92 3.69
627 628 0.745128 GGTCGCGAGAGAGAAGAGGA 60.745 60.000 10.24 0.00 42.92 3.71
628 629 0.655733 GTCGCGAGAGAGAAGAGGAG 59.344 60.000 10.24 0.00 42.92 3.69
629 630 0.537653 TCGCGAGAGAGAAGAGGAGA 59.462 55.000 3.71 0.00 36.84 3.71
630 631 0.937304 CGCGAGAGAGAAGAGGAGAG 59.063 60.000 0.00 0.00 0.00 3.20
631 632 1.308998 GCGAGAGAGAAGAGGAGAGG 58.691 60.000 0.00 0.00 0.00 3.69
632 633 1.134220 GCGAGAGAGAAGAGGAGAGGA 60.134 57.143 0.00 0.00 0.00 3.71
633 634 2.682563 GCGAGAGAGAAGAGGAGAGGAA 60.683 54.545 0.00 0.00 0.00 3.36
634 635 3.616219 CGAGAGAGAAGAGGAGAGGAAA 58.384 50.000 0.00 0.00 0.00 3.13
635 636 4.207165 CGAGAGAGAAGAGGAGAGGAAAT 58.793 47.826 0.00 0.00 0.00 2.17
636 637 4.644685 CGAGAGAGAAGAGGAGAGGAAATT 59.355 45.833 0.00 0.00 0.00 1.82
637 638 5.127031 CGAGAGAGAAGAGGAGAGGAAATTT 59.873 44.000 0.00 0.00 0.00 1.82
638 639 6.298441 AGAGAGAAGAGGAGAGGAAATTTG 57.702 41.667 0.00 0.00 0.00 2.32
639 640 5.189539 AGAGAGAAGAGGAGAGGAAATTTGG 59.810 44.000 0.00 0.00 0.00 3.28
640 641 5.097234 AGAGAAGAGGAGAGGAAATTTGGA 58.903 41.667 0.00 0.00 0.00 3.53
641 642 5.730697 AGAGAAGAGGAGAGGAAATTTGGAT 59.269 40.000 0.00 0.00 0.00 3.41
642 643 5.753716 AGAAGAGGAGAGGAAATTTGGATG 58.246 41.667 0.00 0.00 0.00 3.51
643 644 3.895998 AGAGGAGAGGAAATTTGGATGC 58.104 45.455 0.00 0.00 0.00 3.91
644 645 3.526841 AGAGGAGAGGAAATTTGGATGCT 59.473 43.478 0.00 0.00 0.00 3.79
645 646 4.723789 AGAGGAGAGGAAATTTGGATGCTA 59.276 41.667 0.00 0.00 0.00 3.49
646 647 5.046288 AGGAGAGGAAATTTGGATGCTAG 57.954 43.478 0.00 0.00 0.00 3.42
647 648 3.567585 GGAGAGGAAATTTGGATGCTAGC 59.432 47.826 8.10 8.10 0.00 3.42
648 649 4.459330 GAGAGGAAATTTGGATGCTAGCT 58.541 43.478 17.23 0.83 0.00 3.32
649 650 4.205587 AGAGGAAATTTGGATGCTAGCTG 58.794 43.478 17.23 0.00 0.00 4.24
650 651 2.692041 AGGAAATTTGGATGCTAGCTGC 59.308 45.455 17.23 7.56 43.25 5.25
651 652 2.223900 GGAAATTTGGATGCTAGCTGCC 60.224 50.000 17.23 16.81 42.00 4.85
652 653 1.406903 AATTTGGATGCTAGCTGCCC 58.593 50.000 17.23 14.04 42.00 5.36
653 654 0.554792 ATTTGGATGCTAGCTGCCCT 59.445 50.000 17.23 2.43 42.00 5.19
654 655 0.332632 TTTGGATGCTAGCTGCCCTT 59.667 50.000 17.23 0.00 42.00 3.95
655 656 0.332632 TTGGATGCTAGCTGCCCTTT 59.667 50.000 17.23 0.00 42.00 3.11
656 657 0.107017 TGGATGCTAGCTGCCCTTTC 60.107 55.000 17.23 1.74 42.00 2.62
657 658 0.821301 GGATGCTAGCTGCCCTTTCC 60.821 60.000 17.23 6.99 42.00 3.13
658 659 0.107017 GATGCTAGCTGCCCTTTCCA 60.107 55.000 17.23 0.00 42.00 3.53
659 660 0.554792 ATGCTAGCTGCCCTTTCCAT 59.445 50.000 17.23 0.00 42.00 3.41
660 661 0.332632 TGCTAGCTGCCCTTTCCATT 59.667 50.000 17.23 0.00 42.00 3.16
661 662 0.743097 GCTAGCTGCCCTTTCCATTG 59.257 55.000 7.70 0.00 35.15 2.82
662 663 1.957113 GCTAGCTGCCCTTTCCATTGT 60.957 52.381 7.70 0.00 35.15 2.71
663 664 2.683742 GCTAGCTGCCCTTTCCATTGTA 60.684 50.000 7.70 0.00 35.15 2.41
664 665 2.134789 AGCTGCCCTTTCCATTGTAG 57.865 50.000 0.00 0.00 0.00 2.74
665 666 1.355720 AGCTGCCCTTTCCATTGTAGT 59.644 47.619 0.00 0.00 0.00 2.73
666 667 1.474077 GCTGCCCTTTCCATTGTAGTG 59.526 52.381 0.00 0.00 0.00 2.74
667 668 2.795329 CTGCCCTTTCCATTGTAGTGT 58.205 47.619 0.00 0.00 0.00 3.55
668 669 3.157087 CTGCCCTTTCCATTGTAGTGTT 58.843 45.455 0.00 0.00 0.00 3.32
669 670 3.571590 TGCCCTTTCCATTGTAGTGTTT 58.428 40.909 0.00 0.00 0.00 2.83
670 671 3.964031 TGCCCTTTCCATTGTAGTGTTTT 59.036 39.130 0.00 0.00 0.00 2.43
671 672 4.407296 TGCCCTTTCCATTGTAGTGTTTTT 59.593 37.500 0.00 0.00 0.00 1.94
672 673 4.988540 GCCCTTTCCATTGTAGTGTTTTTC 59.011 41.667 0.00 0.00 0.00 2.29
673 674 5.219633 CCCTTTCCATTGTAGTGTTTTTCG 58.780 41.667 0.00 0.00 0.00 3.46
674 675 5.221165 CCCTTTCCATTGTAGTGTTTTTCGT 60.221 40.000 0.00 0.00 0.00 3.85
675 676 6.016943 CCCTTTCCATTGTAGTGTTTTTCGTA 60.017 38.462 0.00 0.00 0.00 3.43
676 677 7.419204 CCTTTCCATTGTAGTGTTTTTCGTAA 58.581 34.615 0.00 0.00 0.00 3.18
677 678 7.916450 CCTTTCCATTGTAGTGTTTTTCGTAAA 59.084 33.333 0.00 0.00 0.00 2.01
678 679 9.458374 CTTTCCATTGTAGTGTTTTTCGTAAAT 57.542 29.630 0.00 0.00 0.00 1.40
705 706 9.869757 ATAATCTTTAAAGTGGTGGTTTTATGC 57.130 29.630 14.74 0.00 0.00 3.14
706 707 5.764131 TCTTTAAAGTGGTGGTTTTATGCG 58.236 37.500 14.74 0.00 0.00 4.73
707 708 5.531659 TCTTTAAAGTGGTGGTTTTATGCGA 59.468 36.000 14.74 0.00 0.00 5.10
708 709 5.968528 TTAAAGTGGTGGTTTTATGCGAT 57.031 34.783 0.00 0.00 0.00 4.58
709 710 4.864704 AAAGTGGTGGTTTTATGCGATT 57.135 36.364 0.00 0.00 0.00 3.34
710 711 4.864704 AAGTGGTGGTTTTATGCGATTT 57.135 36.364 0.00 0.00 0.00 2.17
711 712 5.968528 AAGTGGTGGTTTTATGCGATTTA 57.031 34.783 0.00 0.00 0.00 1.40
712 713 5.305139 AGTGGTGGTTTTATGCGATTTAC 57.695 39.130 0.00 0.00 0.00 2.01
713 714 5.007682 AGTGGTGGTTTTATGCGATTTACT 58.992 37.500 0.00 0.00 0.00 2.24
714 715 5.475564 AGTGGTGGTTTTATGCGATTTACTT 59.524 36.000 0.00 0.00 0.00 2.24
715 716 5.571357 GTGGTGGTTTTATGCGATTTACTTG 59.429 40.000 0.00 0.00 0.00 3.16
716 717 5.099575 GGTGGTTTTATGCGATTTACTTGG 58.900 41.667 0.00 0.00 0.00 3.61
717 718 4.561213 GTGGTTTTATGCGATTTACTTGGC 59.439 41.667 0.00 0.00 0.00 4.52
718 719 4.109766 GGTTTTATGCGATTTACTTGGCC 58.890 43.478 0.00 0.00 0.00 5.36
719 720 4.381079 GGTTTTATGCGATTTACTTGGCCA 60.381 41.667 0.00 0.00 0.00 5.36
720 721 5.164954 GTTTTATGCGATTTACTTGGCCAA 58.835 37.500 19.25 19.25 0.00 4.52
721 722 5.392767 TTTATGCGATTTACTTGGCCAAA 57.607 34.783 20.91 4.58 0.00 3.28
722 723 3.508744 ATGCGATTTACTTGGCCAAAG 57.491 42.857 20.91 15.62 42.07 2.77
723 724 1.067915 TGCGATTTACTTGGCCAAAGC 60.068 47.619 20.91 15.36 39.76 3.51
734 735 2.629002 GCCAAAGCCTGTTTCGAGA 58.371 52.632 0.00 0.00 0.00 4.04
735 736 1.168714 GCCAAAGCCTGTTTCGAGAT 58.831 50.000 0.00 0.00 0.00 2.75
736 737 1.541588 GCCAAAGCCTGTTTCGAGATT 59.458 47.619 0.00 0.00 0.00 2.40
737 738 2.669391 GCCAAAGCCTGTTTCGAGATTG 60.669 50.000 0.00 0.00 0.00 2.67
738 739 2.813754 CCAAAGCCTGTTTCGAGATTGA 59.186 45.455 0.00 0.00 0.00 2.57
739 740 3.441572 CCAAAGCCTGTTTCGAGATTGAT 59.558 43.478 0.00 0.00 0.00 2.57
740 741 4.082571 CCAAAGCCTGTTTCGAGATTGATT 60.083 41.667 0.00 0.00 0.00 2.57
741 742 5.464168 CAAAGCCTGTTTCGAGATTGATTT 58.536 37.500 0.00 0.00 0.00 2.17
742 743 5.712152 AAGCCTGTTTCGAGATTGATTTT 57.288 34.783 0.00 0.00 0.00 1.82
764 765 7.448588 TTTGTGTTTCGAGATTGATTTTGTG 57.551 32.000 0.00 0.00 0.00 3.33
824 825 4.076394 GCCAATACCAAGTTACCAACAGA 58.924 43.478 0.00 0.00 0.00 3.41
887 888 8.447833 CGCAAAGAAAAATATCTACAACACCTA 58.552 33.333 0.00 0.00 0.00 3.08
996 1001 9.893634 TGCCATGATTGAGAATAATTTGAAAAT 57.106 25.926 0.00 0.00 0.00 1.82
1041 1233 2.482142 GCACGAAAATTGGGGTTGAACA 60.482 45.455 0.00 0.00 0.00 3.18
1116 1308 0.954452 CCCAACAGCACAAACTCCTC 59.046 55.000 0.00 0.00 0.00 3.71
1201 1402 4.147449 CACCATCGCGCCTCTCCA 62.147 66.667 0.00 0.00 0.00 3.86
1202 1403 4.148825 ACCATCGCGCCTCTCCAC 62.149 66.667 0.00 0.00 0.00 4.02
1203 1404 4.899239 CCATCGCGCCTCTCCACC 62.899 72.222 0.00 0.00 0.00 4.61
1204 1405 4.899239 CATCGCGCCTCTCCACCC 62.899 72.222 0.00 0.00 0.00 4.61
1208 1409 3.844090 GCGCCTCTCCACCCTCTC 61.844 72.222 0.00 0.00 0.00 3.20
1209 1410 3.151022 CGCCTCTCCACCCTCTCC 61.151 72.222 0.00 0.00 0.00 3.71
1267 1468 4.760047 ATCCACCCGCGTCTGCAC 62.760 66.667 4.92 0.00 42.97 4.57
1288 1489 1.289380 GAGAAGACGTCGCCTGGTT 59.711 57.895 15.62 1.54 0.00 3.67
1319 1520 2.705826 GTCTACGACCGCGACGAT 59.294 61.111 26.02 15.31 41.64 3.73
1357 1582 3.278574 CCAACCCTAAATGCTTCATCGA 58.721 45.455 0.00 0.00 0.00 3.59
1652 1925 2.478872 TCTCCCCGGAGAAGATGAAT 57.521 50.000 11.12 0.00 46.89 2.57
1714 2183 3.816524 CTCGAGGAAGAGCGCCGT 61.817 66.667 2.29 0.00 0.00 5.68
1715 2184 4.116328 TCGAGGAAGAGCGCCGTG 62.116 66.667 2.29 0.00 0.00 4.94
1717 2186 3.760035 GAGGAAGAGCGCCGTGGA 61.760 66.667 2.29 0.00 0.00 4.02
1718 2187 3.708220 GAGGAAGAGCGCCGTGGAG 62.708 68.421 2.29 0.00 0.00 3.86
1719 2188 3.760035 GGAAGAGCGCCGTGGAGA 61.760 66.667 2.29 0.00 0.00 3.71
1720 2189 2.202676 GAAGAGCGCCGTGGAGAG 60.203 66.667 2.29 0.00 0.00 3.20
1721 2190 4.443266 AAGAGCGCCGTGGAGAGC 62.443 66.667 2.29 0.00 0.00 4.09
1728 2197 3.432588 CCGTGGAGAGCGTCGACT 61.433 66.667 14.70 0.00 31.86 4.18
1729 2198 2.202362 CGTGGAGAGCGTCGACTG 60.202 66.667 14.70 8.46 31.86 3.51
1730 2199 2.179517 GTGGAGAGCGTCGACTGG 59.820 66.667 14.70 0.00 31.37 4.00
1731 2200 2.282251 TGGAGAGCGTCGACTGGT 60.282 61.111 14.70 12.55 0.00 4.00
1732 2201 2.333417 TGGAGAGCGTCGACTGGTC 61.333 63.158 22.89 22.89 0.00 4.02
1733 2202 2.041686 GGAGAGCGTCGACTGGTCT 61.042 63.158 28.86 28.86 46.13 3.85
1734 2203 3.580916 AGAGCGTCGACTGGTCTC 58.419 61.111 25.53 19.34 39.89 3.36
1735 2204 2.041686 AGAGCGTCGACTGGTCTCC 61.042 63.158 25.53 10.61 39.89 3.71
1736 2205 3.384014 GAGCGTCGACTGGTCTCCG 62.384 68.421 22.99 7.65 0.00 4.63
1738 2207 4.477975 CGTCGACTGGTCTCCGCC 62.478 72.222 14.70 0.00 0.00 6.13
1739 2208 3.063084 GTCGACTGGTCTCCGCCT 61.063 66.667 8.70 0.00 0.00 5.52
1740 2209 2.750637 TCGACTGGTCTCCGCCTC 60.751 66.667 0.00 0.00 0.00 4.70
1741 2210 3.827898 CGACTGGTCTCCGCCTCC 61.828 72.222 0.00 0.00 0.00 4.30
1742 2211 3.462678 GACTGGTCTCCGCCTCCC 61.463 72.222 0.00 0.00 0.00 4.30
1743 2212 4.316823 ACTGGTCTCCGCCTCCCA 62.317 66.667 0.00 0.00 0.00 4.37
1744 2213 3.465403 CTGGTCTCCGCCTCCCAG 61.465 72.222 0.00 0.00 38.63 4.45
1754 2223 3.795041 CCTCCCAGGCTGCCTCTG 61.795 72.222 20.49 12.94 0.00 3.35
1765 2234 3.647367 GCCTCTGGCCTATGTGGA 58.353 61.111 3.32 0.00 44.06 4.02
1766 2235 1.449353 GCCTCTGGCCTATGTGGAG 59.551 63.158 3.32 2.14 44.06 3.86
1767 2236 1.449353 CCTCTGGCCTATGTGGAGC 59.551 63.158 3.32 0.00 38.35 4.70
1768 2237 1.068753 CTCTGGCCTATGTGGAGCG 59.931 63.158 3.32 0.00 38.35 5.03
1769 2238 1.680522 CTCTGGCCTATGTGGAGCGT 61.681 60.000 3.32 0.00 38.35 5.07
1770 2239 0.396556 TCTGGCCTATGTGGAGCGTA 60.397 55.000 3.32 0.00 38.35 4.42
1771 2240 0.464036 CTGGCCTATGTGGAGCGTAA 59.536 55.000 3.32 0.00 38.35 3.18
1772 2241 0.464036 TGGCCTATGTGGAGCGTAAG 59.536 55.000 3.32 0.00 38.35 2.34
1773 2242 0.750850 GGCCTATGTGGAGCGTAAGA 59.249 55.000 0.00 0.00 37.58 2.10
1774 2243 1.344763 GGCCTATGTGGAGCGTAAGAT 59.655 52.381 0.00 0.00 37.58 2.40
1775 2244 2.408050 GCCTATGTGGAGCGTAAGATG 58.592 52.381 0.00 0.00 37.58 2.90
1776 2245 2.868044 GCCTATGTGGAGCGTAAGATGG 60.868 54.545 0.00 0.00 37.58 3.51
1777 2246 2.628178 CCTATGTGGAGCGTAAGATGGA 59.372 50.000 0.00 0.00 37.58 3.41
1778 2247 2.898729 ATGTGGAGCGTAAGATGGAG 57.101 50.000 0.00 0.00 43.02 3.86
1779 2248 0.824109 TGTGGAGCGTAAGATGGAGG 59.176 55.000 0.00 0.00 43.02 4.30
1780 2249 0.530870 GTGGAGCGTAAGATGGAGGC 60.531 60.000 0.00 0.00 43.02 4.70
1781 2250 1.300233 GGAGCGTAAGATGGAGGCG 60.300 63.158 0.00 0.00 43.02 5.52
1782 2251 1.734137 GAGCGTAAGATGGAGGCGA 59.266 57.895 0.00 0.00 43.02 5.54
1783 2252 0.102481 GAGCGTAAGATGGAGGCGAA 59.898 55.000 0.00 0.00 43.02 4.70
1784 2253 0.103208 AGCGTAAGATGGAGGCGAAG 59.897 55.000 0.00 0.00 43.02 3.79
1785 2254 0.876342 GCGTAAGATGGAGGCGAAGG 60.876 60.000 0.00 0.00 43.02 3.46
1786 2255 0.744874 CGTAAGATGGAGGCGAAGGA 59.255 55.000 0.00 0.00 43.02 3.36
1787 2256 1.269309 CGTAAGATGGAGGCGAAGGAG 60.269 57.143 0.00 0.00 43.02 3.69
1788 2257 1.069358 GTAAGATGGAGGCGAAGGAGG 59.931 57.143 0.00 0.00 0.00 4.30
1789 2258 0.618968 AAGATGGAGGCGAAGGAGGT 60.619 55.000 0.00 0.00 0.00 3.85
1790 2259 0.261991 AGATGGAGGCGAAGGAGGTA 59.738 55.000 0.00 0.00 0.00 3.08
1791 2260 1.120530 GATGGAGGCGAAGGAGGTAA 58.879 55.000 0.00 0.00 0.00 2.85
1792 2261 1.069358 GATGGAGGCGAAGGAGGTAAG 59.931 57.143 0.00 0.00 0.00 2.34
1793 2262 1.144276 GGAGGCGAAGGAGGTAAGC 59.856 63.158 0.00 0.00 0.00 3.09
1794 2263 1.614241 GGAGGCGAAGGAGGTAAGCA 61.614 60.000 0.00 0.00 0.00 3.91
1795 2264 0.460459 GAGGCGAAGGAGGTAAGCAC 60.460 60.000 0.00 0.00 0.00 4.40
1796 2265 1.810030 GGCGAAGGAGGTAAGCACG 60.810 63.158 0.00 0.00 0.00 5.34
1797 2266 1.810030 GCGAAGGAGGTAAGCACGG 60.810 63.158 0.00 0.00 0.00 4.94
1798 2267 1.888018 CGAAGGAGGTAAGCACGGA 59.112 57.895 0.00 0.00 0.00 4.69
1799 2268 0.460311 CGAAGGAGGTAAGCACGGAT 59.540 55.000 0.00 0.00 0.00 4.18
1800 2269 1.536284 CGAAGGAGGTAAGCACGGATC 60.536 57.143 0.00 0.00 0.00 3.36
1801 2270 1.480954 GAAGGAGGTAAGCACGGATCA 59.519 52.381 0.00 0.00 0.00 2.92
1802 2271 1.115467 AGGAGGTAAGCACGGATCAG 58.885 55.000 0.00 0.00 0.00 2.90
1803 2272 0.105039 GGAGGTAAGCACGGATCAGG 59.895 60.000 0.00 0.00 0.00 3.86
1804 2273 0.530870 GAGGTAAGCACGGATCAGGC 60.531 60.000 0.00 0.00 0.00 4.85
1805 2274 1.220749 GGTAAGCACGGATCAGGCA 59.779 57.895 8.49 0.00 0.00 4.75
1806 2275 0.811616 GGTAAGCACGGATCAGGCAG 60.812 60.000 8.49 0.00 0.00 4.85
1807 2276 1.153369 TAAGCACGGATCAGGCAGC 60.153 57.895 8.49 4.61 0.00 5.25
1808 2277 2.906182 TAAGCACGGATCAGGCAGCG 62.906 60.000 8.49 0.00 0.00 5.18
1847 2316 4.559063 CTGGCAGGGATGAGGCGG 62.559 72.222 6.61 0.00 0.00 6.13
1849 2318 4.115199 GGCAGGGATGAGGCGGTT 62.115 66.667 0.00 0.00 0.00 4.44
1850 2319 2.514824 GCAGGGATGAGGCGGTTC 60.515 66.667 0.00 0.00 0.00 3.62
1851 2320 2.202932 CAGGGATGAGGCGGTTCG 60.203 66.667 0.00 0.00 0.00 3.95
1862 2331 4.420143 CGGTTCGCATCTGGTAGG 57.580 61.111 0.00 0.00 0.00 3.18
1863 2332 1.883084 CGGTTCGCATCTGGTAGGC 60.883 63.158 0.00 0.00 0.00 3.93
1868 2337 3.264897 GCATCTGGTAGGCGCGTG 61.265 66.667 13.84 0.00 0.00 5.34
1869 2338 2.586079 CATCTGGTAGGCGCGTGG 60.586 66.667 13.84 0.57 0.00 4.94
1870 2339 4.530857 ATCTGGTAGGCGCGTGGC 62.531 66.667 15.67 15.67 42.51 5.01
2006 2481 2.416701 CGTGGCTTTCTGTTGGTTGTTT 60.417 45.455 0.00 0.00 0.00 2.83
2080 2567 9.429109 TGAGTTTGAGGTACCATGTAGATAATA 57.571 33.333 15.94 0.00 0.00 0.98
2104 2591 6.987403 AAATTAGGACTCAGAGATACTCCC 57.013 41.667 3.79 0.00 0.00 4.30
2105 2592 5.941146 ATTAGGACTCAGAGATACTCCCT 57.059 43.478 3.79 3.45 0.00 4.20
2106 2593 3.876309 AGGACTCAGAGATACTCCCTC 57.124 52.381 3.79 0.00 0.00 4.30
2107 2594 2.445525 AGGACTCAGAGATACTCCCTCC 59.554 54.545 3.79 0.00 0.00 4.30
2108 2595 2.500229 GACTCAGAGATACTCCCTCCG 58.500 57.143 3.79 0.00 0.00 4.63
2109 2596 1.847737 ACTCAGAGATACTCCCTCCGT 59.152 52.381 3.79 0.00 0.00 4.69
2110 2597 2.242708 ACTCAGAGATACTCCCTCCGTT 59.757 50.000 3.79 0.00 0.00 4.44
2111 2598 3.292460 CTCAGAGATACTCCCTCCGTTT 58.708 50.000 0.00 0.00 0.00 3.60
2112 2599 3.288964 TCAGAGATACTCCCTCCGTTTC 58.711 50.000 0.00 0.00 0.00 2.78
2113 2600 3.024547 CAGAGATACTCCCTCCGTTTCA 58.975 50.000 0.00 0.00 0.00 2.69
2114 2601 3.639094 CAGAGATACTCCCTCCGTTTCAT 59.361 47.826 0.00 0.00 0.00 2.57
2115 2602 4.827835 CAGAGATACTCCCTCCGTTTCATA 59.172 45.833 0.00 0.00 0.00 2.15
2116 2603 5.302059 CAGAGATACTCCCTCCGTTTCATAA 59.698 44.000 0.00 0.00 0.00 1.90
2117 2604 6.015010 CAGAGATACTCCCTCCGTTTCATAAT 60.015 42.308 0.00 0.00 0.00 1.28
2118 2605 6.015010 AGAGATACTCCCTCCGTTTCATAATG 60.015 42.308 0.00 0.00 0.00 1.90
2119 2606 5.602978 AGATACTCCCTCCGTTTCATAATGT 59.397 40.000 0.00 0.00 0.00 2.71
2120 2607 6.781014 AGATACTCCCTCCGTTTCATAATGTA 59.219 38.462 0.00 0.00 0.00 2.29
2121 2608 5.277857 ACTCCCTCCGTTTCATAATGTAG 57.722 43.478 0.00 0.00 0.00 2.74
2122 2609 4.715297 ACTCCCTCCGTTTCATAATGTAGT 59.285 41.667 0.00 0.00 0.00 2.73
2123 2610 5.018539 TCCCTCCGTTTCATAATGTAGTG 57.981 43.478 0.00 0.00 0.00 2.74
2124 2611 3.560068 CCCTCCGTTTCATAATGTAGTGC 59.440 47.826 0.00 0.00 0.00 4.40
2125 2612 3.560068 CCTCCGTTTCATAATGTAGTGCC 59.440 47.826 0.00 0.00 0.00 5.01
2126 2613 4.442706 CTCCGTTTCATAATGTAGTGCCT 58.557 43.478 0.00 0.00 0.00 4.75
2127 2614 5.452776 CCTCCGTTTCATAATGTAGTGCCTA 60.453 44.000 0.00 0.00 0.00 3.93
2128 2615 6.169557 TCCGTTTCATAATGTAGTGCCTAT 57.830 37.500 0.00 0.00 0.00 2.57
2129 2616 7.292713 TCCGTTTCATAATGTAGTGCCTATA 57.707 36.000 0.00 0.00 0.00 1.31
2130 2617 7.375834 TCCGTTTCATAATGTAGTGCCTATAG 58.624 38.462 0.00 0.00 0.00 1.31
2131 2618 7.231925 TCCGTTTCATAATGTAGTGCCTATAGA 59.768 37.037 0.00 0.00 0.00 1.98
2132 2619 8.035394 CCGTTTCATAATGTAGTGCCTATAGAT 58.965 37.037 0.00 0.00 0.00 1.98
2133 2620 9.424319 CGTTTCATAATGTAGTGCCTATAGATT 57.576 33.333 0.00 0.00 0.00 2.40
2161 2648 9.487790 TTTGAAAAGTCAAATCTCACAAACTTT 57.512 25.926 0.00 0.00 46.48 2.66
2162 2649 8.464770 TGAAAAGTCAAATCTCACAAACTTTG 57.535 30.769 0.00 0.00 37.12 2.77
2163 2650 8.303156 TGAAAAGTCAAATCTCACAAACTTTGA 58.697 29.630 8.55 0.00 37.12 2.69
2166 2653 5.890334 GTCAAATCTCACAAACTTTGACCA 58.110 37.500 8.55 0.00 45.88 4.02
2167 2654 6.329496 GTCAAATCTCACAAACTTTGACCAA 58.671 36.000 8.55 0.00 45.88 3.67
2168 2655 6.473455 GTCAAATCTCACAAACTTTGACCAAG 59.527 38.462 8.55 0.96 45.88 3.61
2178 2665 3.963129 ACTTTGACCAAGTTTGTGGAGA 58.037 40.909 0.00 0.00 43.89 3.71
2179 2666 4.340617 ACTTTGACCAAGTTTGTGGAGAA 58.659 39.130 0.00 0.00 43.89 2.87
2180 2667 4.956075 ACTTTGACCAAGTTTGTGGAGAAT 59.044 37.500 0.00 0.00 43.89 2.40
2181 2668 5.422012 ACTTTGACCAAGTTTGTGGAGAATT 59.578 36.000 0.00 0.00 43.89 2.17
2182 2669 5.930837 TTGACCAAGTTTGTGGAGAATTT 57.069 34.783 0.00 0.00 41.65 1.82
2183 2670 5.930837 TGACCAAGTTTGTGGAGAATTTT 57.069 34.783 0.00 0.00 41.65 1.82
2184 2671 6.293004 TGACCAAGTTTGTGGAGAATTTTT 57.707 33.333 0.00 0.00 41.65 1.94
2242 2729 9.725019 AGATTCATTGTAAGATGTAGTTTCACA 57.275 29.630 0.00 0.00 0.00 3.58
2321 2808 9.974980 AAAGTTTACAAAGTTTGACTTCTCAAA 57.025 25.926 22.23 7.27 42.93 2.69
2322 2809 9.974980 AAGTTTACAAAGTTTGACTTCTCAAAA 57.025 25.926 22.23 6.39 45.89 2.44
2323 2810 9.974980 AGTTTACAAAGTTTGACTTCTCAAAAA 57.025 25.926 22.23 5.53 45.89 1.94
2351 2838 4.481368 AGGCACTACATTATGAAACGGA 57.519 40.909 0.00 0.00 36.02 4.69
2352 2839 4.442706 AGGCACTACATTATGAAACGGAG 58.557 43.478 0.00 0.00 36.02 4.63
2353 2840 3.560068 GGCACTACATTATGAAACGGAGG 59.440 47.826 0.00 0.00 0.00 4.30
2354 2841 3.560068 GCACTACATTATGAAACGGAGGG 59.440 47.826 0.00 0.00 0.00 4.30
2355 2842 4.682320 GCACTACATTATGAAACGGAGGGA 60.682 45.833 0.00 0.00 0.00 4.20
2356 2843 5.050490 CACTACATTATGAAACGGAGGGAG 58.950 45.833 0.00 0.00 0.00 4.30
2357 2844 4.715297 ACTACATTATGAAACGGAGGGAGT 59.285 41.667 0.00 0.00 0.00 3.85
2358 2845 5.895534 ACTACATTATGAAACGGAGGGAGTA 59.104 40.000 0.00 0.00 0.00 2.59
2365 2852 1.933021 AACGGAGGGAGTATGTGACA 58.067 50.000 0.00 0.00 0.00 3.58
2403 2890 4.647291 ACAAATTTCAGCTTCGTCTACG 57.353 40.909 0.00 0.00 41.45 3.51
2412 2899 1.224075 CTTCGTCTACGCTATCCCGA 58.776 55.000 0.00 0.00 39.60 5.14
2422 2909 1.869754 CGCTATCCCGAAGATGTGTGG 60.870 57.143 0.00 0.00 36.33 4.17
2423 2910 1.871080 CTATCCCGAAGATGTGTGGC 58.129 55.000 0.00 0.00 36.33 5.01
2424 2911 1.414181 CTATCCCGAAGATGTGTGGCT 59.586 52.381 0.00 0.00 36.33 4.75
2425 2912 0.107508 ATCCCGAAGATGTGTGGCTG 60.108 55.000 0.00 0.00 32.41 4.85
2428 2915 1.238439 CCGAAGATGTGTGGCTGTTT 58.762 50.000 0.00 0.00 0.00 2.83
2467 2955 5.640783 TCATCACTTTGTATCAGTTCAGCTG 59.359 40.000 7.63 7.63 46.34 4.24
2472 2960 7.171508 TCACTTTGTATCAGTTCAGCTGTTTAG 59.828 37.037 14.67 3.19 45.23 1.85
2505 2993 8.895932 ATATAAAGCTGAACGAAACATGTTTC 57.104 30.769 32.42 32.42 43.98 2.78
2506 2994 4.630894 AAGCTGAACGAAACATGTTTCA 57.369 36.364 37.33 24.55 46.84 2.69
2513 3001 5.298026 TGAACGAAACATGTTTCAAGGATGA 59.702 36.000 37.33 17.04 46.84 2.92
2514 3002 5.964958 ACGAAACATGTTTCAAGGATGAT 57.035 34.783 37.33 17.28 46.84 2.45
2515 3003 5.702865 ACGAAACATGTTTCAAGGATGATG 58.297 37.500 37.33 24.84 46.84 3.07
2516 3004 5.097529 CGAAACATGTTTCAAGGATGATGG 58.902 41.667 37.33 20.68 46.84 3.51
2517 3005 5.335897 CGAAACATGTTTCAAGGATGATGGT 60.336 40.000 37.33 10.19 46.84 3.55
2518 3006 6.128035 CGAAACATGTTTCAAGGATGATGGTA 60.128 38.462 37.33 0.00 46.84 3.25
2519 3007 7.415541 CGAAACATGTTTCAAGGATGATGGTAT 60.416 37.037 37.33 9.24 46.84 2.73
2520 3008 6.949352 ACATGTTTCAAGGATGATGGTATC 57.051 37.500 0.00 0.00 34.96 2.24
2521 3009 6.666678 ACATGTTTCAAGGATGATGGTATCT 58.333 36.000 0.00 0.00 34.96 1.98
2522 3010 7.121382 ACATGTTTCAAGGATGATGGTATCTT 58.879 34.615 0.00 0.00 34.96 2.40
2523 3011 7.067859 ACATGTTTCAAGGATGATGGTATCTTG 59.932 37.037 0.00 0.00 34.96 3.02
2524 3012 5.887598 TGTTTCAAGGATGATGGTATCTTGG 59.112 40.000 0.00 0.00 34.96 3.61
2525 3013 4.090761 TCAAGGATGATGGTATCTTGGC 57.909 45.455 0.00 0.00 0.00 4.52
2526 3014 3.459227 TCAAGGATGATGGTATCTTGGCA 59.541 43.478 0.00 0.00 0.00 4.92
2527 3015 4.079844 TCAAGGATGATGGTATCTTGGCAA 60.080 41.667 0.00 0.00 0.00 4.52
2528 3016 4.524802 AGGATGATGGTATCTTGGCAAA 57.475 40.909 0.00 0.00 0.00 3.68
2529 3017 4.467769 AGGATGATGGTATCTTGGCAAAG 58.532 43.478 0.00 0.00 34.45 2.77
2530 3018 4.166725 AGGATGATGGTATCTTGGCAAAGA 59.833 41.667 5.87 5.87 46.33 2.52
2531 3019 4.889409 GGATGATGGTATCTTGGCAAAGAA 59.111 41.667 7.83 0.00 45.44 2.52
2532 3020 5.360714 GGATGATGGTATCTTGGCAAAGAAA 59.639 40.000 7.83 0.00 45.44 2.52
2533 3021 6.041296 GGATGATGGTATCTTGGCAAAGAAAT 59.959 38.462 7.83 0.00 45.44 2.17
2534 3022 6.455360 TGATGGTATCTTGGCAAAGAAATC 57.545 37.500 7.83 9.39 45.44 2.17
2535 3023 5.360714 TGATGGTATCTTGGCAAAGAAATCC 59.639 40.000 7.83 10.84 45.44 3.01
2536 3024 4.934356 TGGTATCTTGGCAAAGAAATCCT 58.066 39.130 7.83 0.00 45.44 3.24
2537 3025 6.073447 TGGTATCTTGGCAAAGAAATCCTA 57.927 37.500 7.83 0.00 45.44 2.94
2538 3026 6.672593 TGGTATCTTGGCAAAGAAATCCTAT 58.327 36.000 7.83 0.00 45.44 2.57
2539 3027 6.772716 TGGTATCTTGGCAAAGAAATCCTATC 59.227 38.462 7.83 0.00 45.44 2.08
2540 3028 6.772716 GGTATCTTGGCAAAGAAATCCTATCA 59.227 38.462 7.83 0.00 45.44 2.15
2541 3029 6.956202 ATCTTGGCAAAGAAATCCTATCAG 57.044 37.500 7.83 0.00 45.44 2.90
2542 3030 5.819991 TCTTGGCAAAGAAATCCTATCAGT 58.180 37.500 0.00 0.00 39.52 3.41
2543 3031 5.882557 TCTTGGCAAAGAAATCCTATCAGTC 59.117 40.000 0.00 0.00 39.52 3.51
2544 3032 4.191544 TGGCAAAGAAATCCTATCAGTCG 58.808 43.478 0.00 0.00 0.00 4.18
2545 3033 3.561725 GGCAAAGAAATCCTATCAGTCGG 59.438 47.826 0.00 0.00 0.00 4.79
2546 3034 4.442706 GCAAAGAAATCCTATCAGTCGGA 58.557 43.478 0.00 0.00 0.00 4.55
2547 3035 4.509600 GCAAAGAAATCCTATCAGTCGGAG 59.490 45.833 0.00 0.00 31.82 4.63
2548 3036 4.946478 AAGAAATCCTATCAGTCGGAGG 57.054 45.455 0.00 0.00 31.82 4.30
2549 3037 3.917300 AGAAATCCTATCAGTCGGAGGT 58.083 45.455 0.00 0.00 31.82 3.85
2550 3038 5.063017 AGAAATCCTATCAGTCGGAGGTA 57.937 43.478 0.00 0.00 31.82 3.08
2588 3076 7.710676 ACCATGACTGTCATATACTATCTCC 57.289 40.000 21.88 0.00 34.28 3.71
2592 3080 7.946381 TGACTGTCATATACTATCTCCATCC 57.054 40.000 6.36 0.00 0.00 3.51
2607 3095 3.197983 TCCATCCTGGTTTATTGGTCCT 58.802 45.455 0.00 0.00 39.03 3.85
2609 3097 3.053693 CCATCCTGGTTTATTGGTCCTCA 60.054 47.826 0.00 0.00 31.35 3.86
2612 3100 6.364701 CATCCTGGTTTATTGGTCCTCATTA 58.635 40.000 0.00 0.00 0.00 1.90
2622 3110 8.621532 TTATTGGTCCTCATTATAATCAGTGC 57.378 34.615 0.00 0.00 0.00 4.40
2623 3111 5.894298 TGGTCCTCATTATAATCAGTGCT 57.106 39.130 0.00 0.00 0.00 4.40
2624 3112 6.252599 TGGTCCTCATTATAATCAGTGCTT 57.747 37.500 0.00 0.00 0.00 3.91
2670 3158 9.740239 ACTAATAAAATGTTCATGCATGTCATC 57.260 29.630 25.43 14.33 31.79 2.92
2712 3200 9.480053 AAGAACAATGTCCAAATACAAAATCAG 57.520 29.630 0.00 0.00 32.02 2.90
2714 3202 6.757237 ACAATGTCCAAATACAAAATCAGCA 58.243 32.000 0.00 0.00 32.02 4.41
2738 3226 7.904461 GCAATATAATTTTTGTTGACATGCACC 59.096 33.333 0.00 0.00 0.00 5.01
2815 3303 3.371595 CCAATAAACCAGGGTGGAGGTAG 60.372 52.174 0.00 0.00 40.96 3.18
2819 5884 1.948391 ACCAGGGTGGAGGTAGTAAC 58.052 55.000 0.00 0.00 40.96 2.50
2856 5921 9.565090 TTCGATGAAGATTTGAATTCTATCCAT 57.435 29.630 7.05 9.01 0.00 3.41
2970 6038 7.858879 GCAATTTCATTCCATAATTGAAATGGC 59.141 33.333 16.71 16.71 43.11 4.40
3079 6148 3.494924 CGGAAGAGGCCATAATCATCACA 60.495 47.826 5.01 0.00 0.00 3.58
3081 6150 4.518211 GGAAGAGGCCATAATCATCACAAG 59.482 45.833 5.01 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 3.269347 CATAGCGGGCCCGTTTCG 61.269 66.667 42.53 27.42 42.09 3.46
8 9 3.583086 GCATAGCGGGCCCGTTTC 61.583 66.667 42.53 27.63 42.09 2.78
30 31 4.034258 CTTGCTGCAGTGTGGCGG 62.034 66.667 16.64 0.00 43.14 6.13
31 32 4.695231 GCTTGCTGCAGTGTGGCG 62.695 66.667 16.64 0.00 42.31 5.69
32 33 4.353437 GGCTTGCTGCAGTGTGGC 62.353 66.667 16.64 13.37 45.15 5.01
33 34 4.034258 CGGCTTGCTGCAGTGTGG 62.034 66.667 16.64 4.77 45.15 4.17
34 35 4.034258 CCGGCTTGCTGCAGTGTG 62.034 66.667 16.64 6.60 45.15 3.82
65 66 4.479993 GATGAGCGGCAGGGTGCT 62.480 66.667 1.45 0.00 44.28 4.40
67 68 4.457496 ACGATGAGCGGCAGGGTG 62.457 66.667 1.45 0.00 46.49 4.61
74 75 2.725008 GGGAGAGACGATGAGCGG 59.275 66.667 0.00 0.00 46.49 5.52
76 77 2.851071 CGGGGGAGAGACGATGAGC 61.851 68.421 0.00 0.00 0.00 4.26
77 78 2.851071 GCGGGGGAGAGACGATGAG 61.851 68.421 0.00 0.00 0.00 2.90
78 79 2.833582 GCGGGGGAGAGACGATGA 60.834 66.667 0.00 0.00 0.00 2.92
79 80 3.917760 GGCGGGGGAGAGACGATG 61.918 72.222 0.00 0.00 0.00 3.84
80 81 4.144727 AGGCGGGGGAGAGACGAT 62.145 66.667 0.00 0.00 0.00 3.73
81 82 4.816984 GAGGCGGGGGAGAGACGA 62.817 72.222 0.00 0.00 0.00 4.20
85 86 2.891307 TTTAGGGAGGCGGGGGAGAG 62.891 65.000 0.00 0.00 0.00 3.20
86 87 2.891307 CTTTAGGGAGGCGGGGGAGA 62.891 65.000 0.00 0.00 0.00 3.71
87 88 2.366435 TTTAGGGAGGCGGGGGAG 60.366 66.667 0.00 0.00 0.00 4.30
88 89 2.366435 CTTTAGGGAGGCGGGGGA 60.366 66.667 0.00 0.00 0.00 4.81
89 90 4.191015 GCTTTAGGGAGGCGGGGG 62.191 72.222 0.00 0.00 0.00 5.40
90 91 4.191015 GGCTTTAGGGAGGCGGGG 62.191 72.222 0.00 0.00 32.25 5.73
91 92 3.407967 TGGCTTTAGGGAGGCGGG 61.408 66.667 0.00 0.00 44.53 6.13
92 93 2.124695 GTGGCTTTAGGGAGGCGG 60.125 66.667 0.00 0.00 44.53 6.13
93 94 2.511600 CGTGGCTTTAGGGAGGCG 60.512 66.667 0.00 0.00 44.53 5.52
94 95 0.744771 CTTCGTGGCTTTAGGGAGGC 60.745 60.000 0.00 0.00 42.15 4.70
95 96 0.744771 GCTTCGTGGCTTTAGGGAGG 60.745 60.000 0.00 0.00 0.00 4.30
96 97 0.036388 TGCTTCGTGGCTTTAGGGAG 60.036 55.000 4.36 0.00 0.00 4.30
97 98 0.036388 CTGCTTCGTGGCTTTAGGGA 60.036 55.000 4.36 0.00 0.00 4.20
98 99 0.036388 TCTGCTTCGTGGCTTTAGGG 60.036 55.000 4.36 0.00 0.00 3.53
99 100 1.079503 GTCTGCTTCGTGGCTTTAGG 58.920 55.000 4.36 0.00 0.00 2.69
100 101 1.079503 GGTCTGCTTCGTGGCTTTAG 58.920 55.000 4.36 0.00 0.00 1.85
101 102 0.321298 GGGTCTGCTTCGTGGCTTTA 60.321 55.000 4.36 0.00 0.00 1.85
102 103 1.600916 GGGTCTGCTTCGTGGCTTT 60.601 57.895 4.36 0.00 0.00 3.51
103 104 2.032681 GGGTCTGCTTCGTGGCTT 59.967 61.111 4.36 0.00 0.00 4.35
104 105 4.379243 CGGGTCTGCTTCGTGGCT 62.379 66.667 4.36 0.00 0.00 4.75
524 525 4.838486 CTCTCTGCCGCCGTCGTC 62.838 72.222 0.00 0.00 0.00 4.20
527 528 3.708220 CTTCCTCTCTGCCGCCGTC 62.708 68.421 0.00 0.00 0.00 4.79
528 529 3.764466 CTTCCTCTCTGCCGCCGT 61.764 66.667 0.00 0.00 0.00 5.68
529 530 4.521062 CCTTCCTCTCTGCCGCCG 62.521 72.222 0.00 0.00 0.00 6.46
530 531 4.168291 CCCTTCCTCTCTGCCGCC 62.168 72.222 0.00 0.00 0.00 6.13
531 532 4.168291 CCCCTTCCTCTCTGCCGC 62.168 72.222 0.00 0.00 0.00 6.53
532 533 3.474570 CCCCCTTCCTCTCTGCCG 61.475 72.222 0.00 0.00 0.00 5.69
533 534 2.041265 TCCCCCTTCCTCTCTGCC 59.959 66.667 0.00 0.00 0.00 4.85
534 535 2.069430 CCTCCCCCTTCCTCTCTGC 61.069 68.421 0.00 0.00 0.00 4.26
535 536 1.383803 CCCTCCCCCTTCCTCTCTG 60.384 68.421 0.00 0.00 0.00 3.35
536 537 1.550374 TCCCTCCCCCTTCCTCTCT 60.550 63.158 0.00 0.00 0.00 3.10
537 538 1.074850 CTCCCTCCCCCTTCCTCTC 60.075 68.421 0.00 0.00 0.00 3.20
538 539 1.550374 TCTCCCTCCCCCTTCCTCT 60.550 63.158 0.00 0.00 0.00 3.69
539 540 1.074850 CTCTCCCTCCCCCTTCCTC 60.075 68.421 0.00 0.00 0.00 3.71
540 541 2.652113 CCTCTCCCTCCCCCTTCCT 61.652 68.421 0.00 0.00 0.00 3.36
541 542 2.040359 CCTCTCCCTCCCCCTTCC 60.040 72.222 0.00 0.00 0.00 3.46
542 543 2.770475 GCCTCTCCCTCCCCCTTC 60.770 72.222 0.00 0.00 0.00 3.46
543 544 4.806339 CGCCTCTCCCTCCCCCTT 62.806 72.222 0.00 0.00 0.00 3.95
606 607 2.277628 CTTCTCTCTCGCGACCGC 60.278 66.667 3.71 4.06 37.85 5.68
607 608 1.350319 CTCTTCTCTCTCGCGACCG 59.650 63.158 3.71 0.00 0.00 4.79
608 609 0.745128 TCCTCTTCTCTCTCGCGACC 60.745 60.000 3.71 0.00 0.00 4.79
609 610 0.655733 CTCCTCTTCTCTCTCGCGAC 59.344 60.000 3.71 0.00 0.00 5.19
610 611 0.537653 TCTCCTCTTCTCTCTCGCGA 59.462 55.000 9.26 9.26 0.00 5.87
611 612 0.937304 CTCTCCTCTTCTCTCTCGCG 59.063 60.000 0.00 0.00 0.00 5.87
612 613 1.134220 TCCTCTCCTCTTCTCTCTCGC 60.134 57.143 0.00 0.00 0.00 5.03
613 614 3.275617 TTCCTCTCCTCTTCTCTCTCG 57.724 52.381 0.00 0.00 0.00 4.04
614 615 6.340522 CAAATTTCCTCTCCTCTTCTCTCTC 58.659 44.000 0.00 0.00 0.00 3.20
615 616 5.189539 CCAAATTTCCTCTCCTCTTCTCTCT 59.810 44.000 0.00 0.00 0.00 3.10
616 617 5.188751 TCCAAATTTCCTCTCCTCTTCTCTC 59.811 44.000 0.00 0.00 0.00 3.20
617 618 5.097234 TCCAAATTTCCTCTCCTCTTCTCT 58.903 41.667 0.00 0.00 0.00 3.10
618 619 5.428184 TCCAAATTTCCTCTCCTCTTCTC 57.572 43.478 0.00 0.00 0.00 2.87
619 620 5.753716 CATCCAAATTTCCTCTCCTCTTCT 58.246 41.667 0.00 0.00 0.00 2.85
620 621 4.337836 GCATCCAAATTTCCTCTCCTCTTC 59.662 45.833 0.00 0.00 0.00 2.87
621 622 4.017683 AGCATCCAAATTTCCTCTCCTCTT 60.018 41.667 0.00 0.00 0.00 2.85
622 623 3.526841 AGCATCCAAATTTCCTCTCCTCT 59.473 43.478 0.00 0.00 0.00 3.69
623 624 3.895998 AGCATCCAAATTTCCTCTCCTC 58.104 45.455 0.00 0.00 0.00 3.71
624 625 4.688321 GCTAGCATCCAAATTTCCTCTCCT 60.688 45.833 10.63 0.00 0.00 3.69
625 626 3.567585 GCTAGCATCCAAATTTCCTCTCC 59.432 47.826 10.63 0.00 0.00 3.71
626 627 4.275443 CAGCTAGCATCCAAATTTCCTCTC 59.725 45.833 18.83 0.00 0.00 3.20
627 628 4.205587 CAGCTAGCATCCAAATTTCCTCT 58.794 43.478 18.83 0.00 0.00 3.69
628 629 3.243334 GCAGCTAGCATCCAAATTTCCTC 60.243 47.826 18.83 0.00 44.79 3.71
629 630 2.692041 GCAGCTAGCATCCAAATTTCCT 59.308 45.455 18.83 0.00 44.79 3.36
630 631 3.089573 GCAGCTAGCATCCAAATTTCC 57.910 47.619 18.83 0.00 44.79 3.13
642 643 0.743097 CAATGGAAAGGGCAGCTAGC 59.257 55.000 6.62 6.62 44.65 3.42
643 644 2.134789 ACAATGGAAAGGGCAGCTAG 57.865 50.000 0.00 0.00 0.00 3.42
644 645 2.576191 ACTACAATGGAAAGGGCAGCTA 59.424 45.455 0.00 0.00 0.00 3.32
645 646 1.355720 ACTACAATGGAAAGGGCAGCT 59.644 47.619 0.00 0.00 0.00 4.24
646 647 1.474077 CACTACAATGGAAAGGGCAGC 59.526 52.381 0.00 0.00 0.00 5.25
647 648 2.795329 ACACTACAATGGAAAGGGCAG 58.205 47.619 0.00 0.00 0.00 4.85
648 649 2.969821 ACACTACAATGGAAAGGGCA 57.030 45.000 0.00 0.00 0.00 5.36
649 650 4.600692 AAAACACTACAATGGAAAGGGC 57.399 40.909 0.00 0.00 0.00 5.19
650 651 5.219633 CGAAAAACACTACAATGGAAAGGG 58.780 41.667 0.00 0.00 0.00 3.95
651 652 5.827666 ACGAAAAACACTACAATGGAAAGG 58.172 37.500 0.00 0.00 0.00 3.11
652 653 8.844441 TTTACGAAAAACACTACAATGGAAAG 57.156 30.769 0.00 0.00 0.00 2.62
679 680 9.869757 GCATAAAACCACCACTTTAAAGATTAT 57.130 29.630 21.92 9.26 0.00 1.28
680 681 8.024285 CGCATAAAACCACCACTTTAAAGATTA 58.976 33.333 21.92 7.70 0.00 1.75
681 682 6.866248 CGCATAAAACCACCACTTTAAAGATT 59.134 34.615 21.92 2.46 0.00 2.40
682 683 6.207810 TCGCATAAAACCACCACTTTAAAGAT 59.792 34.615 21.92 3.51 0.00 2.40
683 684 5.531659 TCGCATAAAACCACCACTTTAAAGA 59.468 36.000 21.92 0.00 0.00 2.52
684 685 5.764131 TCGCATAAAACCACCACTTTAAAG 58.236 37.500 13.76 13.76 0.00 1.85
685 686 5.769484 TCGCATAAAACCACCACTTTAAA 57.231 34.783 0.00 0.00 0.00 1.52
686 687 5.968528 ATCGCATAAAACCACCACTTTAA 57.031 34.783 0.00 0.00 0.00 1.52
687 688 5.968528 AATCGCATAAAACCACCACTTTA 57.031 34.783 0.00 0.00 0.00 1.85
688 689 4.864704 AATCGCATAAAACCACCACTTT 57.135 36.364 0.00 0.00 0.00 2.66
689 690 4.864704 AAATCGCATAAAACCACCACTT 57.135 36.364 0.00 0.00 0.00 3.16
690 691 5.007682 AGTAAATCGCATAAAACCACCACT 58.992 37.500 0.00 0.00 0.00 4.00
691 692 5.305139 AGTAAATCGCATAAAACCACCAC 57.695 39.130 0.00 0.00 0.00 4.16
692 693 5.336055 CCAAGTAAATCGCATAAAACCACCA 60.336 40.000 0.00 0.00 0.00 4.17
693 694 5.099575 CCAAGTAAATCGCATAAAACCACC 58.900 41.667 0.00 0.00 0.00 4.61
694 695 4.561213 GCCAAGTAAATCGCATAAAACCAC 59.439 41.667 0.00 0.00 0.00 4.16
695 696 4.381079 GGCCAAGTAAATCGCATAAAACCA 60.381 41.667 0.00 0.00 0.00 3.67
696 697 4.109766 GGCCAAGTAAATCGCATAAAACC 58.890 43.478 0.00 0.00 0.00 3.27
697 698 4.739195 TGGCCAAGTAAATCGCATAAAAC 58.261 39.130 0.61 0.00 0.00 2.43
698 699 5.392767 TTGGCCAAGTAAATCGCATAAAA 57.607 34.783 16.05 0.00 0.00 1.52
699 700 5.392767 TTTGGCCAAGTAAATCGCATAAA 57.607 34.783 19.48 0.00 0.00 1.40
700 701 4.676723 GCTTTGGCCAAGTAAATCGCATAA 60.677 41.667 19.48 0.00 34.56 1.90
701 702 3.181491 GCTTTGGCCAAGTAAATCGCATA 60.181 43.478 19.48 0.00 34.56 3.14
702 703 2.417243 GCTTTGGCCAAGTAAATCGCAT 60.417 45.455 19.48 0.00 34.56 4.73
703 704 1.067915 GCTTTGGCCAAGTAAATCGCA 60.068 47.619 19.48 0.00 34.56 5.10
704 705 1.629013 GCTTTGGCCAAGTAAATCGC 58.371 50.000 19.48 9.82 34.56 4.58
716 717 1.168714 ATCTCGAAACAGGCTTTGGC 58.831 50.000 0.00 0.00 37.82 4.52
717 718 2.813754 TCAATCTCGAAACAGGCTTTGG 59.186 45.455 0.00 0.00 0.00 3.28
718 719 4.691860 ATCAATCTCGAAACAGGCTTTG 57.308 40.909 0.00 0.00 0.00 2.77
719 720 5.712152 AAATCAATCTCGAAACAGGCTTT 57.288 34.783 0.00 0.00 0.00 3.51
720 721 5.010012 ACAAAATCAATCTCGAAACAGGCTT 59.990 36.000 0.00 0.00 0.00 4.35
721 722 4.520492 ACAAAATCAATCTCGAAACAGGCT 59.480 37.500 0.00 0.00 0.00 4.58
722 723 4.618489 CACAAAATCAATCTCGAAACAGGC 59.382 41.667 0.00 0.00 0.00 4.85
723 724 5.762045 ACACAAAATCAATCTCGAAACAGG 58.238 37.500 0.00 0.00 0.00 4.00
724 725 7.356719 CGAAACACAAAATCAATCTCGAAACAG 60.357 37.037 0.00 0.00 0.00 3.16
725 726 6.413526 CGAAACACAAAATCAATCTCGAAACA 59.586 34.615 0.00 0.00 0.00 2.83
726 727 6.631238 TCGAAACACAAAATCAATCTCGAAAC 59.369 34.615 0.00 0.00 30.57 2.78
727 728 6.720343 TCGAAACACAAAATCAATCTCGAAA 58.280 32.000 0.00 0.00 30.57 3.46
728 729 6.201997 TCTCGAAACACAAAATCAATCTCGAA 59.798 34.615 0.00 0.00 32.97 3.71
729 730 5.694458 TCTCGAAACACAAAATCAATCTCGA 59.306 36.000 0.00 0.00 0.00 4.04
730 731 5.915857 TCTCGAAACACAAAATCAATCTCG 58.084 37.500 0.00 0.00 0.00 4.04
731 732 8.017373 TCAATCTCGAAACACAAAATCAATCTC 58.983 33.333 0.00 0.00 0.00 2.75
732 733 7.874940 TCAATCTCGAAACACAAAATCAATCT 58.125 30.769 0.00 0.00 0.00 2.40
733 734 8.679288 ATCAATCTCGAAACACAAAATCAATC 57.321 30.769 0.00 0.00 0.00 2.67
734 735 9.480053 AAATCAATCTCGAAACACAAAATCAAT 57.520 25.926 0.00 0.00 0.00 2.57
735 736 8.870160 AAATCAATCTCGAAACACAAAATCAA 57.130 26.923 0.00 0.00 0.00 2.57
736 737 8.754096 CAAAATCAATCTCGAAACACAAAATCA 58.246 29.630 0.00 0.00 0.00 2.57
737 738 8.755018 ACAAAATCAATCTCGAAACACAAAATC 58.245 29.630 0.00 0.00 0.00 2.17
738 739 8.542132 CACAAAATCAATCTCGAAACACAAAAT 58.458 29.630 0.00 0.00 0.00 1.82
739 740 7.757173 TCACAAAATCAATCTCGAAACACAAAA 59.243 29.630 0.00 0.00 0.00 2.44
740 741 7.254137 TCACAAAATCAATCTCGAAACACAAA 58.746 30.769 0.00 0.00 0.00 2.83
741 742 6.790282 TCACAAAATCAATCTCGAAACACAA 58.210 32.000 0.00 0.00 0.00 3.33
742 743 6.370433 TCACAAAATCAATCTCGAAACACA 57.630 33.333 0.00 0.00 0.00 3.72
764 765 1.226717 GACGACGGTCATCAGGCTC 60.227 63.158 9.10 0.00 42.91 4.70
845 846 9.495572 TTTTCTTTGCGGGTGATATTTTATTTT 57.504 25.926 0.00 0.00 0.00 1.82
846 847 9.495572 TTTTTCTTTGCGGGTGATATTTTATTT 57.504 25.926 0.00 0.00 0.00 1.40
847 848 9.665719 ATTTTTCTTTGCGGGTGATATTTTATT 57.334 25.926 0.00 0.00 0.00 1.40
996 1001 5.509163 CGAGGAAAGTTAGAGGAGTTTGTCA 60.509 44.000 0.00 0.00 0.00 3.58
1004 1190 1.201647 CGTGCGAGGAAAGTTAGAGGA 59.798 52.381 0.00 0.00 0.00 3.71
1005 1191 1.201647 TCGTGCGAGGAAAGTTAGAGG 59.798 52.381 0.00 0.00 0.00 3.69
1006 1192 2.631418 TCGTGCGAGGAAAGTTAGAG 57.369 50.000 0.00 0.00 0.00 2.43
1007 1193 3.374220 TTTCGTGCGAGGAAAGTTAGA 57.626 42.857 0.00 0.00 29.79 2.10
1008 1194 4.663636 ATTTTCGTGCGAGGAAAGTTAG 57.336 40.909 0.00 0.00 34.10 2.34
1009 1195 4.319911 CCAATTTTCGTGCGAGGAAAGTTA 60.320 41.667 9.74 0.00 32.67 2.24
1041 1233 0.666374 CCGTTTCTTTGCCTTCGGTT 59.334 50.000 0.00 0.00 34.38 4.44
1058 1250 2.930040 AGCGTATGTGTCATTTTCTCCG 59.070 45.455 0.00 0.00 0.00 4.63
1116 1308 1.206578 CGTGTGCGGCTTGGTTTAG 59.793 57.895 0.00 0.00 0.00 1.85
1237 1438 2.933287 TGGATCCGGGCTGGTTGT 60.933 61.111 13.14 0.00 39.52 3.32
1267 1468 3.441290 AGGCGACGTCTTCTCCGG 61.441 66.667 14.70 0.00 33.86 5.14
1319 1520 1.814429 TGGTGTTCTCCTTGAGGGAA 58.186 50.000 0.00 0.00 44.58 3.97
1357 1582 1.844289 TGGCCGGGGTAGTTCTTGT 60.844 57.895 2.18 0.00 0.00 3.16
1711 2180 3.432588 AGTCGACGCTCTCCACGG 61.433 66.667 10.46 0.00 34.00 4.94
1712 2181 2.202362 CAGTCGACGCTCTCCACG 60.202 66.667 10.46 0.00 0.00 4.94
1713 2182 2.179517 CCAGTCGACGCTCTCCAC 59.820 66.667 10.46 0.00 0.00 4.02
1714 2183 2.282251 ACCAGTCGACGCTCTCCA 60.282 61.111 10.46 0.00 0.00 3.86
1715 2184 1.984321 GAGACCAGTCGACGCTCTCC 61.984 65.000 20.75 7.81 34.09 3.71
1716 2185 1.426223 GAGACCAGTCGACGCTCTC 59.574 63.158 18.38 18.38 34.09 3.20
1717 2186 2.041686 GGAGACCAGTCGACGCTCT 61.042 63.158 21.26 16.85 34.09 4.09
1718 2187 2.486042 GGAGACCAGTCGACGCTC 59.514 66.667 10.46 14.57 34.09 5.03
1719 2188 3.432588 CGGAGACCAGTCGACGCT 61.433 66.667 10.46 6.45 34.09 5.07
1721 2190 4.477975 GGCGGAGACCAGTCGACG 62.478 72.222 10.46 5.16 36.93 5.12
1722 2191 3.053849 GAGGCGGAGACCAGTCGAC 62.054 68.421 7.70 7.70 31.70 4.20
1723 2192 2.750637 GAGGCGGAGACCAGTCGA 60.751 66.667 0.00 0.00 31.70 4.20
1724 2193 3.827898 GGAGGCGGAGACCAGTCG 61.828 72.222 0.00 0.00 31.70 4.18
1725 2194 3.462678 GGGAGGCGGAGACCAGTC 61.463 72.222 0.00 0.00 31.70 3.51
1726 2195 4.316823 TGGGAGGCGGAGACCAGT 62.317 66.667 0.00 0.00 31.70 4.00
1727 2196 3.465403 CTGGGAGGCGGAGACCAG 61.465 72.222 0.00 0.00 43.87 4.00
1737 2206 3.795041 CAGAGGCAGCCTGGGAGG 61.795 72.222 22.26 0.00 38.80 4.30
1738 2207 3.795041 CCAGAGGCAGCCTGGGAG 61.795 72.222 22.26 5.31 45.66 4.30
1749 2218 1.449353 GCTCCACATAGGCCAGAGG 59.551 63.158 5.01 2.41 37.29 3.69
1750 2219 1.068753 CGCTCCACATAGGCCAGAG 59.931 63.158 5.01 1.92 37.29 3.35
1751 2220 0.396556 TACGCTCCACATAGGCCAGA 60.397 55.000 5.01 0.00 37.29 3.86
1752 2221 0.464036 TTACGCTCCACATAGGCCAG 59.536 55.000 5.01 0.00 37.29 4.85
1753 2222 0.464036 CTTACGCTCCACATAGGCCA 59.536 55.000 5.01 0.00 37.29 5.36
1754 2223 0.750850 TCTTACGCTCCACATAGGCC 59.249 55.000 0.00 0.00 37.29 5.19
1755 2224 2.408050 CATCTTACGCTCCACATAGGC 58.592 52.381 0.00 0.00 37.29 3.93
1756 2225 2.628178 TCCATCTTACGCTCCACATAGG 59.372 50.000 0.00 0.00 39.47 2.57
1757 2226 3.305676 CCTCCATCTTACGCTCCACATAG 60.306 52.174 0.00 0.00 0.00 2.23
1758 2227 2.628178 CCTCCATCTTACGCTCCACATA 59.372 50.000 0.00 0.00 0.00 2.29
1759 2228 1.414181 CCTCCATCTTACGCTCCACAT 59.586 52.381 0.00 0.00 0.00 3.21
1760 2229 0.824109 CCTCCATCTTACGCTCCACA 59.176 55.000 0.00 0.00 0.00 4.17
1761 2230 0.530870 GCCTCCATCTTACGCTCCAC 60.531 60.000 0.00 0.00 0.00 4.02
1762 2231 1.823295 GCCTCCATCTTACGCTCCA 59.177 57.895 0.00 0.00 0.00 3.86
1763 2232 1.300233 CGCCTCCATCTTACGCTCC 60.300 63.158 0.00 0.00 0.00 4.70
1764 2233 0.102481 TTCGCCTCCATCTTACGCTC 59.898 55.000 0.00 0.00 0.00 5.03
1765 2234 0.103208 CTTCGCCTCCATCTTACGCT 59.897 55.000 0.00 0.00 0.00 5.07
1766 2235 0.876342 CCTTCGCCTCCATCTTACGC 60.876 60.000 0.00 0.00 0.00 4.42
1767 2236 0.744874 TCCTTCGCCTCCATCTTACG 59.255 55.000 0.00 0.00 0.00 3.18
1768 2237 1.069358 CCTCCTTCGCCTCCATCTTAC 59.931 57.143 0.00 0.00 0.00 2.34
1769 2238 1.343075 ACCTCCTTCGCCTCCATCTTA 60.343 52.381 0.00 0.00 0.00 2.10
1770 2239 0.618968 ACCTCCTTCGCCTCCATCTT 60.619 55.000 0.00 0.00 0.00 2.40
1771 2240 0.261991 TACCTCCTTCGCCTCCATCT 59.738 55.000 0.00 0.00 0.00 2.90
1772 2241 1.069358 CTTACCTCCTTCGCCTCCATC 59.931 57.143 0.00 0.00 0.00 3.51
1773 2242 1.123928 CTTACCTCCTTCGCCTCCAT 58.876 55.000 0.00 0.00 0.00 3.41
1774 2243 1.614241 GCTTACCTCCTTCGCCTCCA 61.614 60.000 0.00 0.00 0.00 3.86
1775 2244 1.144276 GCTTACCTCCTTCGCCTCC 59.856 63.158 0.00 0.00 0.00 4.30
1776 2245 0.460459 GTGCTTACCTCCTTCGCCTC 60.460 60.000 0.00 0.00 0.00 4.70
1777 2246 1.597461 GTGCTTACCTCCTTCGCCT 59.403 57.895 0.00 0.00 0.00 5.52
1778 2247 1.810030 CGTGCTTACCTCCTTCGCC 60.810 63.158 0.00 0.00 0.00 5.54
1779 2248 1.810030 CCGTGCTTACCTCCTTCGC 60.810 63.158 0.00 0.00 0.00 4.70
1780 2249 0.460311 ATCCGTGCTTACCTCCTTCG 59.540 55.000 0.00 0.00 0.00 3.79
1781 2250 1.480954 TGATCCGTGCTTACCTCCTTC 59.519 52.381 0.00 0.00 0.00 3.46
1782 2251 1.482593 CTGATCCGTGCTTACCTCCTT 59.517 52.381 0.00 0.00 0.00 3.36
1783 2252 1.115467 CTGATCCGTGCTTACCTCCT 58.885 55.000 0.00 0.00 0.00 3.69
1784 2253 0.105039 CCTGATCCGTGCTTACCTCC 59.895 60.000 0.00 0.00 0.00 4.30
1785 2254 0.530870 GCCTGATCCGTGCTTACCTC 60.531 60.000 0.00 0.00 0.00 3.85
1786 2255 1.264749 TGCCTGATCCGTGCTTACCT 61.265 55.000 0.00 0.00 0.00 3.08
1787 2256 0.811616 CTGCCTGATCCGTGCTTACC 60.812 60.000 0.00 0.00 0.00 2.85
1788 2257 1.432270 GCTGCCTGATCCGTGCTTAC 61.432 60.000 0.00 0.00 0.00 2.34
1789 2258 1.153369 GCTGCCTGATCCGTGCTTA 60.153 57.895 0.00 0.00 0.00 3.09
1790 2259 2.437359 GCTGCCTGATCCGTGCTT 60.437 61.111 0.00 0.00 0.00 3.91
1791 2260 4.827087 CGCTGCCTGATCCGTGCT 62.827 66.667 0.00 0.00 0.00 4.40
1830 2299 4.559063 CCGCCTCATCCCTGCCAG 62.559 72.222 0.00 0.00 0.00 4.85
1832 2301 4.115199 AACCGCCTCATCCCTGCC 62.115 66.667 0.00 0.00 0.00 4.85
1833 2302 2.514824 GAACCGCCTCATCCCTGC 60.515 66.667 0.00 0.00 0.00 4.85
1834 2303 2.202932 CGAACCGCCTCATCCCTG 60.203 66.667 0.00 0.00 0.00 4.45
1845 2314 1.883084 GCCTACCAGATGCGAACCG 60.883 63.158 0.00 0.00 0.00 4.44
1846 2315 4.126524 GCCTACCAGATGCGAACC 57.873 61.111 0.00 0.00 0.00 3.62
1851 2320 3.264897 CACGCGCCTACCAGATGC 61.265 66.667 5.73 0.00 0.00 3.91
1852 2321 2.586079 CCACGCGCCTACCAGATG 60.586 66.667 5.73 0.00 0.00 2.90
1853 2322 4.530857 GCCACGCGCCTACCAGAT 62.531 66.667 5.73 0.00 0.00 2.90
1883 2352 1.756950 TCCATCCTCTTCCGTCCCG 60.757 63.158 0.00 0.00 0.00 5.14
1884 2353 1.823976 GTCCATCCTCTTCCGTCCC 59.176 63.158 0.00 0.00 0.00 4.46
1885 2354 1.437986 CGTCCATCCTCTTCCGTCC 59.562 63.158 0.00 0.00 0.00 4.79
1886 2355 1.227002 GCGTCCATCCTCTTCCGTC 60.227 63.158 0.00 0.00 0.00 4.79
1887 2356 1.258445 AAGCGTCCATCCTCTTCCGT 61.258 55.000 0.00 0.00 0.00 4.69
1888 2357 0.807667 CAAGCGTCCATCCTCTTCCG 60.808 60.000 0.00 0.00 0.00 4.30
1889 2358 0.462759 CCAAGCGTCCATCCTCTTCC 60.463 60.000 0.00 0.00 0.00 3.46
1890 2359 1.092345 GCCAAGCGTCCATCCTCTTC 61.092 60.000 0.00 0.00 0.00 2.87
1891 2360 1.078143 GCCAAGCGTCCATCCTCTT 60.078 57.895 0.00 0.00 0.00 2.85
1892 2361 2.586792 GCCAAGCGTCCATCCTCT 59.413 61.111 0.00 0.00 0.00 3.69
2006 2481 5.252547 TGGCAAATCTACACAAAGCATAGA 58.747 37.500 0.00 0.00 0.00 1.98
2080 2567 7.368198 GGGAGTATCTCTGAGTCCTAATTTT 57.632 40.000 4.32 0.00 36.74 1.82
2081 2568 6.987403 GGGAGTATCTCTGAGTCCTAATTT 57.013 41.667 4.32 0.00 36.74 1.82
2100 2587 5.050490 CACTACATTATGAAACGGAGGGAG 58.950 45.833 0.00 0.00 0.00 4.30
2101 2588 4.682320 GCACTACATTATGAAACGGAGGGA 60.682 45.833 0.00 0.00 0.00 4.20
2102 2589 3.560068 GCACTACATTATGAAACGGAGGG 59.440 47.826 0.00 0.00 0.00 4.30
2103 2590 3.560068 GGCACTACATTATGAAACGGAGG 59.440 47.826 0.00 0.00 0.00 4.30
2104 2591 4.442706 AGGCACTACATTATGAAACGGAG 58.557 43.478 0.00 0.00 36.02 4.63
2105 2592 4.481368 AGGCACTACATTATGAAACGGA 57.519 40.909 0.00 0.00 36.02 4.69
2136 2623 8.924691 CAAAGTTTGTGAGATTTGACTTTTCAA 58.075 29.630 7.48 0.00 40.14 2.69
2137 2624 8.303156 TCAAAGTTTGTGAGATTTGACTTTTCA 58.697 29.630 15.08 0.00 36.89 2.69
2138 2625 8.687824 TCAAAGTTTGTGAGATTTGACTTTTC 57.312 30.769 15.08 0.00 36.89 2.29
2144 2631 6.522625 TTGGTCAAAGTTTGTGAGATTTGA 57.477 33.333 15.08 0.00 38.85 2.69
2145 2632 6.817270 CTTGGTCAAAGTTTGTGAGATTTG 57.183 37.500 15.08 0.00 34.66 2.32
2158 2645 4.981806 TTCTCCACAAACTTGGTCAAAG 57.018 40.909 0.00 0.00 42.07 2.77
2159 2646 5.930837 AATTCTCCACAAACTTGGTCAAA 57.069 34.783 0.00 0.00 37.93 2.69
2160 2647 5.930837 AAATTCTCCACAAACTTGGTCAA 57.069 34.783 0.00 0.00 37.93 3.18
2161 2648 5.930837 AAAATTCTCCACAAACTTGGTCA 57.069 34.783 0.00 0.00 37.93 4.02
2216 2703 9.725019 TGTGAAACTACATCTTACAATGAATCT 57.275 29.630 0.00 0.00 38.04 2.40
2273 2760 8.749354 ACTTTGACCAAGTTTGTAGAGAAAAAT 58.251 29.630 0.00 0.00 43.89 1.82
2274 2761 8.117813 ACTTTGACCAAGTTTGTAGAGAAAAA 57.882 30.769 0.00 0.00 43.89 1.94
2275 2762 7.696992 ACTTTGACCAAGTTTGTAGAGAAAA 57.303 32.000 0.00 0.00 43.89 2.29
2288 2775 7.812669 AGTCAAACTTTGTAAACTTTGACCAAG 59.187 33.333 23.58 4.33 44.13 3.61
2289 2776 7.662897 AGTCAAACTTTGTAAACTTTGACCAA 58.337 30.769 23.58 0.00 44.13 3.67
2290 2777 7.222000 AGTCAAACTTTGTAAACTTTGACCA 57.778 32.000 23.58 3.85 44.13 4.02
2291 2778 8.027189 AGAAGTCAAACTTTGTAAACTTTGACC 58.973 33.333 23.58 16.13 44.13 4.02
2292 2779 8.965986 AGAAGTCAAACTTTGTAAACTTTGAC 57.034 30.769 21.72 21.72 43.81 3.18
2293 2780 8.788806 TGAGAAGTCAAACTTTGTAAACTTTGA 58.211 29.630 7.95 7.58 38.80 2.69
2294 2781 8.964420 TGAGAAGTCAAACTTTGTAAACTTTG 57.036 30.769 7.95 0.00 38.80 2.77
2295 2782 9.974980 TTTGAGAAGTCAAACTTTGTAAACTTT 57.025 25.926 7.95 1.53 45.82 2.66
2323 2810 9.424319 CGTTTCATAATGTAGTGCCTATAGATT 57.576 33.333 0.00 0.00 0.00 2.40
2324 2811 8.035394 CCGTTTCATAATGTAGTGCCTATAGAT 58.965 37.037 0.00 0.00 0.00 1.98
2325 2812 7.231925 TCCGTTTCATAATGTAGTGCCTATAGA 59.768 37.037 0.00 0.00 0.00 1.98
2326 2813 7.375834 TCCGTTTCATAATGTAGTGCCTATAG 58.624 38.462 0.00 0.00 0.00 1.31
2327 2814 7.292713 TCCGTTTCATAATGTAGTGCCTATA 57.707 36.000 0.00 0.00 0.00 1.31
2328 2815 6.169557 TCCGTTTCATAATGTAGTGCCTAT 57.830 37.500 0.00 0.00 0.00 2.57
2329 2816 5.452776 CCTCCGTTTCATAATGTAGTGCCTA 60.453 44.000 0.00 0.00 0.00 3.93
2330 2817 4.442706 CTCCGTTTCATAATGTAGTGCCT 58.557 43.478 0.00 0.00 0.00 4.75
2331 2818 3.560068 CCTCCGTTTCATAATGTAGTGCC 59.440 47.826 0.00 0.00 0.00 5.01
2332 2819 3.560068 CCCTCCGTTTCATAATGTAGTGC 59.440 47.826 0.00 0.00 0.00 4.40
2333 2820 5.018539 TCCCTCCGTTTCATAATGTAGTG 57.981 43.478 0.00 0.00 0.00 2.74
2334 2821 4.715297 ACTCCCTCCGTTTCATAATGTAGT 59.285 41.667 0.00 0.00 0.00 2.73
2335 2822 5.277857 ACTCCCTCCGTTTCATAATGTAG 57.722 43.478 0.00 0.00 0.00 2.74
2336 2823 6.325545 ACATACTCCCTCCGTTTCATAATGTA 59.674 38.462 0.00 0.00 0.00 2.29
2337 2824 5.130477 ACATACTCCCTCCGTTTCATAATGT 59.870 40.000 0.00 0.00 0.00 2.71
2338 2825 5.466728 CACATACTCCCTCCGTTTCATAATG 59.533 44.000 0.00 0.00 0.00 1.90
2339 2826 5.365605 TCACATACTCCCTCCGTTTCATAAT 59.634 40.000 0.00 0.00 0.00 1.28
2340 2827 4.712829 TCACATACTCCCTCCGTTTCATAA 59.287 41.667 0.00 0.00 0.00 1.90
2341 2828 4.098960 GTCACATACTCCCTCCGTTTCATA 59.901 45.833 0.00 0.00 0.00 2.15
2342 2829 3.104512 TCACATACTCCCTCCGTTTCAT 58.895 45.455 0.00 0.00 0.00 2.57
2343 2830 2.232941 GTCACATACTCCCTCCGTTTCA 59.767 50.000 0.00 0.00 0.00 2.69
2344 2831 2.232941 TGTCACATACTCCCTCCGTTTC 59.767 50.000 0.00 0.00 0.00 2.78
2345 2832 2.253610 TGTCACATACTCCCTCCGTTT 58.746 47.619 0.00 0.00 0.00 3.60
2346 2833 1.933021 TGTCACATACTCCCTCCGTT 58.067 50.000 0.00 0.00 0.00 4.44
2347 2834 2.160721 ATGTCACATACTCCCTCCGT 57.839 50.000 0.00 0.00 0.00 4.69
2348 2835 3.487372 TCTATGTCACATACTCCCTCCG 58.513 50.000 0.00 0.00 0.00 4.63
2349 2836 5.279708 CCAATCTATGTCACATACTCCCTCC 60.280 48.000 0.00 0.00 0.00 4.30
2350 2837 5.788450 CCAATCTATGTCACATACTCCCTC 58.212 45.833 0.00 0.00 0.00 4.30
2351 2838 4.040952 GCCAATCTATGTCACATACTCCCT 59.959 45.833 0.00 0.00 0.00 4.20
2352 2839 4.202357 TGCCAATCTATGTCACATACTCCC 60.202 45.833 0.00 0.00 0.00 4.30
2353 2840 4.960938 TGCCAATCTATGTCACATACTCC 58.039 43.478 0.00 0.00 0.00 3.85
2354 2841 5.847304 TCTGCCAATCTATGTCACATACTC 58.153 41.667 0.00 0.00 0.00 2.59
2355 2842 5.876651 TCTGCCAATCTATGTCACATACT 57.123 39.130 0.00 0.00 0.00 2.12
2356 2843 6.226052 TCATCTGCCAATCTATGTCACATAC 58.774 40.000 0.00 0.00 0.00 2.39
2357 2844 6.423776 TCATCTGCCAATCTATGTCACATA 57.576 37.500 0.00 0.00 0.00 2.29
2358 2845 5.300411 TCATCTGCCAATCTATGTCACAT 57.700 39.130 0.00 0.00 0.00 3.21
2365 2852 9.358406 TGAAATTTGTATCATCTGCCAATCTAT 57.642 29.630 0.00 0.00 0.00 1.98
2403 2890 1.871080 CCACACATCTTCGGGATAGC 58.129 55.000 0.00 0.00 32.64 2.97
2499 2987 6.548622 CCAAGATACCATCATCCTTGAAACAT 59.451 38.462 0.00 0.00 34.96 2.71
2505 2993 3.824133 TGCCAAGATACCATCATCCTTG 58.176 45.455 0.00 0.00 0.00 3.61
2506 2994 4.524802 TTGCCAAGATACCATCATCCTT 57.475 40.909 0.00 0.00 0.00 3.36
2513 3001 5.522641 AGGATTTCTTTGCCAAGATACCAT 58.477 37.500 0.37 0.00 38.89 3.55
2514 3002 4.934356 AGGATTTCTTTGCCAAGATACCA 58.066 39.130 0.37 0.00 38.89 3.25
2515 3003 6.772716 TGATAGGATTTCTTTGCCAAGATACC 59.227 38.462 0.37 5.74 38.89 2.73
2516 3004 7.500559 ACTGATAGGATTTCTTTGCCAAGATAC 59.499 37.037 0.37 0.00 38.89 2.24
2517 3005 7.577303 ACTGATAGGATTTCTTTGCCAAGATA 58.423 34.615 0.37 0.00 38.89 1.98
2518 3006 6.430007 ACTGATAGGATTTCTTTGCCAAGAT 58.570 36.000 0.37 0.00 38.89 2.40
2519 3007 5.819991 ACTGATAGGATTTCTTTGCCAAGA 58.180 37.500 0.00 0.00 37.24 3.02
2520 3008 5.220739 CGACTGATAGGATTTCTTTGCCAAG 60.221 44.000 0.00 0.00 0.00 3.61
2521 3009 4.635765 CGACTGATAGGATTTCTTTGCCAA 59.364 41.667 0.00 0.00 0.00 4.52
2522 3010 4.191544 CGACTGATAGGATTTCTTTGCCA 58.808 43.478 0.00 0.00 0.00 4.92
2523 3011 3.561725 CCGACTGATAGGATTTCTTTGCC 59.438 47.826 0.00 0.00 0.00 4.52
2524 3012 4.442706 TCCGACTGATAGGATTTCTTTGC 58.557 43.478 0.00 0.00 0.00 3.68
2525 3013 5.053145 CCTCCGACTGATAGGATTTCTTTG 58.947 45.833 0.00 0.00 35.75 2.77
2526 3014 4.717280 ACCTCCGACTGATAGGATTTCTTT 59.283 41.667 0.00 0.00 35.75 2.52
2527 3015 4.290942 ACCTCCGACTGATAGGATTTCTT 58.709 43.478 0.00 0.00 35.75 2.52
2528 3016 3.917300 ACCTCCGACTGATAGGATTTCT 58.083 45.455 0.00 0.00 35.75 2.52
2529 3017 5.279056 CCTTACCTCCGACTGATAGGATTTC 60.279 48.000 0.00 0.00 35.75 2.17
2530 3018 4.589374 CCTTACCTCCGACTGATAGGATTT 59.411 45.833 0.00 0.00 35.75 2.17
2531 3019 4.153411 CCTTACCTCCGACTGATAGGATT 58.847 47.826 0.00 0.00 35.75 3.01
2532 3020 3.500654 CCCTTACCTCCGACTGATAGGAT 60.501 52.174 0.00 0.00 35.75 3.24
2533 3021 2.158505 CCCTTACCTCCGACTGATAGGA 60.159 54.545 0.00 0.00 34.34 2.94
2534 3022 2.240279 CCCTTACCTCCGACTGATAGG 58.760 57.143 0.00 0.00 36.42 2.57
2535 3023 2.240279 CCCCTTACCTCCGACTGATAG 58.760 57.143 0.00 0.00 0.00 2.08
2536 3024 1.572415 ACCCCTTACCTCCGACTGATA 59.428 52.381 0.00 0.00 0.00 2.15
2537 3025 0.338814 ACCCCTTACCTCCGACTGAT 59.661 55.000 0.00 0.00 0.00 2.90
2538 3026 0.115745 AACCCCTTACCTCCGACTGA 59.884 55.000 0.00 0.00 0.00 3.41
2539 3027 1.856629 TAACCCCTTACCTCCGACTG 58.143 55.000 0.00 0.00 0.00 3.51
2540 3028 2.182827 GTTAACCCCTTACCTCCGACT 58.817 52.381 0.00 0.00 0.00 4.18
2541 3029 2.182827 AGTTAACCCCTTACCTCCGAC 58.817 52.381 0.88 0.00 0.00 4.79
2542 3030 2.629017 AGTTAACCCCTTACCTCCGA 57.371 50.000 0.88 0.00 0.00 4.55
2543 3031 4.281941 GGTATAGTTAACCCCTTACCTCCG 59.718 50.000 0.88 0.00 0.00 4.63
2544 3032 5.218959 TGGTATAGTTAACCCCTTACCTCC 58.781 45.833 17.64 5.74 36.06 4.30
2545 3033 6.556116 TCATGGTATAGTTAACCCCTTACCTC 59.444 42.308 17.64 2.35 36.06 3.85
2546 3034 6.328410 GTCATGGTATAGTTAACCCCTTACCT 59.672 42.308 17.64 7.27 36.06 3.08
2547 3035 6.328410 AGTCATGGTATAGTTAACCCCTTACC 59.672 42.308 0.88 9.00 36.06 2.85
2548 3036 7.147602 ACAGTCATGGTATAGTTAACCCCTTAC 60.148 40.741 0.88 0.00 36.06 2.34
2549 3037 6.904654 ACAGTCATGGTATAGTTAACCCCTTA 59.095 38.462 0.88 0.00 36.06 2.69
2550 3038 5.729718 ACAGTCATGGTATAGTTAACCCCTT 59.270 40.000 0.88 0.00 36.06 3.95
2588 3076 4.235079 TGAGGACCAATAAACCAGGATG 57.765 45.455 0.00 0.00 0.00 3.51
2592 3080 9.573166 TGATTATAATGAGGACCAATAAACCAG 57.427 33.333 1.78 0.00 0.00 4.00
2600 3088 6.252599 AGCACTGATTATAATGAGGACCAA 57.747 37.500 15.22 0.00 0.00 3.67
2648 3136 9.438228 TTTTGATGACATGCATGAACATTTTAT 57.562 25.926 32.75 15.33 37.34 1.40
2649 3137 8.828688 TTTTGATGACATGCATGAACATTTTA 57.171 26.923 32.75 20.19 37.34 1.52
2686 3174 9.480053 CTGATTTTGTATTTGGACATTGTTCTT 57.520 29.630 0.00 0.00 0.00 2.52
2688 3176 7.384660 TGCTGATTTTGTATTTGGACATTGTTC 59.615 33.333 0.00 0.00 0.00 3.18
2709 3197 8.871862 GCATGTCAACAAAAATTATATTGCTGA 58.128 29.630 0.00 2.35 31.30 4.26
2712 3200 7.904461 GGTGCATGTCAACAAAAATTATATTGC 59.096 33.333 0.00 0.00 31.06 3.56
2728 3216 3.131755 TGACAAAATGTTGGTGCATGTCA 59.868 39.130 9.32 9.32 39.22 3.58
2729 3217 3.715495 TGACAAAATGTTGGTGCATGTC 58.285 40.909 0.00 4.70 39.22 3.06
2734 3222 6.701400 AGATTTAACTGACAAAATGTTGGTGC 59.299 34.615 0.00 0.00 39.22 5.01
2769 3257 8.871125 TGGTTCCCTTTGTAATTTATGCTAAAA 58.129 29.630 0.00 0.00 0.00 1.52
2777 3265 9.155785 TGGTTTATTGGTTCCCTTTGTAATTTA 57.844 29.630 0.00 0.00 0.00 1.40
2791 3279 2.225267 CCTCCACCCTGGTTTATTGGTT 60.225 50.000 0.00 0.00 39.03 3.67
2792 3280 1.357761 CCTCCACCCTGGTTTATTGGT 59.642 52.381 0.00 0.00 39.03 3.67
2806 3294 3.130693 CCACTAGCTGTTACTACCTCCAC 59.869 52.174 0.00 0.00 0.00 4.02
2807 3295 3.245514 ACCACTAGCTGTTACTACCTCCA 60.246 47.826 0.00 0.00 0.00 3.86
2815 3303 4.491676 TCATCGAAACCACTAGCTGTTAC 58.508 43.478 0.00 0.00 0.00 2.50
2819 5884 3.849911 TCTTCATCGAAACCACTAGCTG 58.150 45.455 0.00 0.00 0.00 4.24
2856 5921 1.837439 ACATATCGAGTTGGCTTCCCA 59.163 47.619 0.00 0.00 40.06 4.37
2961 6029 6.849085 TTTTAAGCCATCTAGCCATTTCAA 57.151 33.333 0.00 0.00 0.00 2.69
3044 6113 2.038557 CCTCTTCCGTTTCCCTTTCTCA 59.961 50.000 0.00 0.00 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.