Multiple sequence alignment - TraesCS5D01G135000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G135000 chr5D 100.000 5309 0 0 1 5309 215304283 215298975 0.000000e+00 9804.0
1 TraesCS5D01G135000 chr5A 89.447 1791 105 28 831 2568 283310038 283308279 0.000000e+00 2183.0
2 TraesCS5D01G135000 chr5A 94.772 1358 69 2 3481 4837 283307586 283306230 0.000000e+00 2113.0
3 TraesCS5D01G135000 chr5A 96.232 637 22 2 2828 3462 283308272 283307636 0.000000e+00 1042.0
4 TraesCS5D01G135000 chr5A 83.780 672 83 19 6 667 531890933 531891588 9.770000e-172 614.0
5 TraesCS5D01G135000 chr5A 87.277 393 40 7 4839 5225 450223193 450223581 1.760000e-119 440.0
6 TraesCS5D01G135000 chr5A 88.312 154 11 5 1631 1783 691663324 691663177 1.520000e-40 178.0
7 TraesCS5D01G135000 chr5A 100.000 40 0 0 5227 5266 283306239 283306200 2.050000e-09 75.0
8 TraesCS5D01G135000 chr5B 95.789 1330 53 2 3481 4810 230881576 230880250 0.000000e+00 2143.0
9 TraesCS5D01G135000 chr5B 97.581 1116 17 5 954 2066 230884218 230883110 0.000000e+00 1903.0
10 TraesCS5D01G135000 chr5B 94.444 900 44 3 1 898 231007900 231007005 0.000000e+00 1380.0
11 TraesCS5D01G135000 chr5B 98.164 708 13 0 2759 3466 230882329 230881622 0.000000e+00 1236.0
12 TraesCS5D01G135000 chr5B 97.619 294 7 0 2160 2453 230882910 230882617 6.140000e-139 505.0
13 TraesCS5D01G135000 chr5B 94.286 175 9 1 2459 2632 230882482 230882308 3.150000e-67 267.0
14 TraesCS5D01G135000 chr2A 83.780 672 82 19 6 667 755829657 755829003 3.510000e-171 612.0
15 TraesCS5D01G135000 chr2A 81.874 651 90 19 2824 3454 406497897 406497255 1.690000e-144 523.0
16 TraesCS5D01G135000 chr2A 81.720 651 91 18 2824 3454 394707078 394707720 7.880000e-143 518.0
17 TraesCS5D01G135000 chr2A 92.958 142 8 2 2623 2764 14062498 14062637 6.970000e-49 206.0
18 TraesCS5D01G135000 chr2A 93.548 62 4 0 2769 2830 4211777 4211716 5.660000e-15 93.5
19 TraesCS5D01G135000 chr2D 82.641 674 90 21 6 668 607598820 607599477 5.960000e-159 571.0
20 TraesCS5D01G135000 chr2D 82.047 674 91 18 7 668 87584478 87585133 1.010000e-151 547.0
21 TraesCS5D01G135000 chr2D 87.500 168 17 3 2146 2312 79056320 79056156 1.950000e-44 191.0
22 TraesCS5D01G135000 chr7D 82.570 677 87 23 6 667 88016421 88015761 7.720000e-158 568.0
23 TraesCS5D01G135000 chr7D 98.462 130 2 0 2626 2755 463561789 463561918 4.140000e-56 230.0
24 TraesCS5D01G135000 chr7D 96.923 130 4 0 2627 2756 371790286 371790157 8.950000e-53 219.0
25 TraesCS5D01G135000 chr7D 91.558 154 10 2 2146 2298 156796992 156796841 5.390000e-50 209.0
26 TraesCS5D01G135000 chr7D 86.154 195 23 3 3051 3243 602687341 602687533 1.940000e-49 207.0
27 TraesCS5D01G135000 chr6D 83.441 622 81 14 56 668 4217010 4217618 4.640000e-155 558.0
28 TraesCS5D01G135000 chr6D 92.466 146 8 2 2150 2294 386931639 386931496 6.970000e-49 206.0
29 TraesCS5D01G135000 chr6D 88.312 77 6 2 2752 2825 382866266 382866342 7.320000e-14 89.8
30 TraesCS5D01G135000 chr7B 82.280 649 91 15 2824 3454 425265469 425264827 1.680000e-149 540.0
31 TraesCS5D01G135000 chr7B 85.784 408 52 6 3049 3454 683228443 683228846 1.370000e-115 427.0
32 TraesCS5D01G135000 chr7B 88.312 77 7 2 2769 2844 682239511 682239436 2.040000e-14 91.6
33 TraesCS5D01G135000 chr7B 89.706 68 6 1 2557 2624 123782861 123782927 9.470000e-13 86.1
34 TraesCS5D01G135000 chr4A 81.591 641 100 9 6 639 561335994 561335365 1.020000e-141 514.0
35 TraesCS5D01G135000 chr4A 85.787 394 49 7 4838 5228 562300965 562300576 1.380000e-110 411.0
36 TraesCS5D01G135000 chr4A 91.304 138 11 1 1660 1796 460230782 460230645 2.520000e-43 187.0
37 TraesCS5D01G135000 chr4A 86.709 158 16 2 1634 1790 3081527 3081374 2.540000e-38 171.0
38 TraesCS5D01G135000 chr4A 96.491 57 2 0 2769 2825 477033275 477033331 1.570000e-15 95.3
39 TraesCS5D01G135000 chr3B 81.690 639 97 17 6 638 735250205 735250829 1.020000e-141 514.0
40 TraesCS5D01G135000 chr3B 89.744 156 11 5 2626 2779 82848437 82848285 1.510000e-45 195.0
41 TraesCS5D01G135000 chr3B 88.608 79 5 3 2752 2826 153587096 153587018 5.660000e-15 93.5
42 TraesCS5D01G135000 chr3B 88.060 67 7 1 2559 2624 637088488 637088554 1.590000e-10 78.7
43 TraesCS5D01G135000 chr6A 87.056 394 44 7 4839 5228 108945885 108945495 6.310000e-119 438.0
44 TraesCS5D01G135000 chr1A 87.056 394 42 7 4838 5225 581867095 581866705 2.270000e-118 436.0
45 TraesCS5D01G135000 chr1A 86.514 393 43 9 4838 5225 119497471 119497084 1.770000e-114 424.0
46 TraesCS5D01G135000 chr1A 94.697 132 7 0 2623 2754 574666422 574666553 6.970000e-49 206.0
47 TraesCS5D01G135000 chr1A 86.719 128 15 2 674 800 549244792 549244918 1.990000e-29 141.0
48 TraesCS5D01G135000 chr7A 87.402 381 45 3 3049 3428 694355153 694355531 8.170000e-118 435.0
49 TraesCS5D01G135000 chr7A 86.500 400 43 9 4833 5225 579566149 579565754 3.800000e-116 429.0
50 TraesCS5D01G135000 chr7A 86.076 395 45 8 4838 5225 57206016 57206407 2.960000e-112 416.0
51 TraesCS5D01G135000 chr7A 93.333 135 9 0 2622 2756 140763946 140764080 3.240000e-47 200.0
52 TraesCS5D01G135000 chr7A 93.333 135 9 0 2622 2756 141052837 141052971 3.240000e-47 200.0
53 TraesCS5D01G135000 chr7A 89.610 154 10 2 1634 1787 113028382 113028235 1.950000e-44 191.0
54 TraesCS5D01G135000 chr7A 89.706 68 7 0 2769 2836 41448705 41448638 2.630000e-13 87.9
55 TraesCS5D01G135000 chr4B 86.534 401 42 10 4835 5228 302741076 302741471 1.060000e-116 431.0
56 TraesCS5D01G135000 chr4B 88.757 169 13 4 2139 2304 482660738 482660573 9.020000e-48 202.0
57 TraesCS5D01G135000 chr4B 92.254 142 10 1 2622 2762 68097537 68097396 3.240000e-47 200.0
58 TraesCS5D01G135000 chr4B 91.852 135 10 1 1660 1793 106227542 106227408 2.520000e-43 187.0
59 TraesCS5D01G135000 chr3D 86.041 394 46 9 4838 5227 564148481 564148093 1.060000e-111 414.0
60 TraesCS5D01G135000 chr3D 96.552 58 2 0 2769 2826 104087052 104086995 4.380000e-16 97.1
61 TraesCS5D01G135000 chr4D 84.980 253 27 8 2573 2825 72840645 72840886 4.110000e-61 246.0
62 TraesCS5D01G135000 chr4D 89.375 160 14 2 2144 2302 280180800 280180643 1.170000e-46 198.0
63 TraesCS5D01G135000 chr4D 88.166 169 14 4 2139 2304 392743507 392743342 4.190000e-46 196.0
64 TraesCS5D01G135000 chr4D 88.820 161 15 2 2144 2303 108627594 108627752 1.510000e-45 195.0
65 TraesCS5D01G135000 chr2B 89.103 156 10 2 1637 1792 224652134 224651986 2.520000e-43 187.0
66 TraesCS5D01G135000 chr2B 84.181 177 19 7 1629 1804 712617522 712617690 4.250000e-36 163.0
67 TraesCS5D01G135000 chr2B 88.889 72 6 2 2560 2630 210261414 210261484 2.630000e-13 87.9
68 TraesCS5D01G135000 chr2B 88.732 71 6 1 2759 2827 144610076 144610146 9.470000e-13 86.1
69 TraesCS5D01G135000 chr2B 89.231 65 6 1 2559 2622 273740369 273740433 4.410000e-11 80.5
70 TraesCS5D01G135000 chr3A 90.323 62 6 0 2563 2624 599863802 599863741 1.230000e-11 82.4
71 TraesCS5D01G135000 chr3A 87.879 66 8 0 2559 2624 686191210 686191275 1.590000e-10 78.7
72 TraesCS5D01G135000 chr1D 88.060 67 7 1 2558 2624 105352525 105352460 1.590000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G135000 chr5D 215298975 215304283 5308 True 9804.00 9804 100.00000 1 5309 1 chr5D.!!$R1 5308
1 TraesCS5D01G135000 chr5A 283306200 283310038 3838 True 1353.25 2183 95.11275 831 5266 4 chr5A.!!$R2 4435
2 TraesCS5D01G135000 chr5A 531890933 531891588 655 False 614.00 614 83.78000 6 667 1 chr5A.!!$F2 661
3 TraesCS5D01G135000 chr5B 231007005 231007900 895 True 1380.00 1380 94.44400 1 898 1 chr5B.!!$R1 897
4 TraesCS5D01G135000 chr5B 230880250 230884218 3968 True 1210.80 2143 96.68780 954 4810 5 chr5B.!!$R2 3856
5 TraesCS5D01G135000 chr2A 755829003 755829657 654 True 612.00 612 83.78000 6 667 1 chr2A.!!$R3 661
6 TraesCS5D01G135000 chr2A 406497255 406497897 642 True 523.00 523 81.87400 2824 3454 1 chr2A.!!$R2 630
7 TraesCS5D01G135000 chr2A 394707078 394707720 642 False 518.00 518 81.72000 2824 3454 1 chr2A.!!$F2 630
8 TraesCS5D01G135000 chr2D 607598820 607599477 657 False 571.00 571 82.64100 6 668 1 chr2D.!!$F2 662
9 TraesCS5D01G135000 chr2D 87584478 87585133 655 False 547.00 547 82.04700 7 668 1 chr2D.!!$F1 661
10 TraesCS5D01G135000 chr7D 88015761 88016421 660 True 568.00 568 82.57000 6 667 1 chr7D.!!$R1 661
11 TraesCS5D01G135000 chr6D 4217010 4217618 608 False 558.00 558 83.44100 56 668 1 chr6D.!!$F1 612
12 TraesCS5D01G135000 chr7B 425264827 425265469 642 True 540.00 540 82.28000 2824 3454 1 chr7B.!!$R1 630
13 TraesCS5D01G135000 chr4A 561335365 561335994 629 True 514.00 514 81.59100 6 639 1 chr4A.!!$R3 633
14 TraesCS5D01G135000 chr3B 735250205 735250829 624 False 514.00 514 81.69000 6 638 1 chr3B.!!$F2 632

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
934 961 1.933853 GCCGACATAACTGGATGTGTC 59.066 52.381 2.63 3.16 40.18 3.67 F
2642 2957 0.549950 AGATACTCCCTCCGTCCGAA 59.450 55.000 0.00 0.00 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2736 3051 0.033796 ATGTACTCCCTCCGTCCGAA 60.034 55.0 0.00 0.00 0.0 4.30 R
4353 4721 0.739813 GGTACACCTTACGGCTGCAG 60.740 60.0 10.11 10.11 0.0 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 86 2.356135 CTGGTGAACAAGTATTCCCGG 58.644 52.381 0.00 0.00 0.00 5.73
163 166 4.156190 TCTCACACTCCGTCTTAAGATGAC 59.844 45.833 23.60 4.89 32.95 3.06
178 181 7.761704 TCTTAAGATGACTTACTTGTCTCATGC 59.238 37.037 0.00 0.00 38.18 4.06
381 395 5.991328 TGACTTCTGAAGCTTTACACAAG 57.009 39.130 17.00 1.01 0.00 3.16
452 470 8.563732 TCTTAGAGATATCTGAATCAAGTGACG 58.436 37.037 10.74 0.00 0.00 4.35
557 579 6.724893 TCGGAACATTATTCCACTCATAGA 57.275 37.500 6.51 0.00 38.49 1.98
558 580 6.513180 TCGGAACATTATTCCACTCATAGAC 58.487 40.000 6.51 0.00 38.49 2.59
573 595 7.653311 CCACTCATAGACGAATATGTTTCATCA 59.347 37.037 10.11 0.00 35.16 3.07
654 680 4.935205 TCACCACAATATTTCGTTCCTCTG 59.065 41.667 0.00 0.00 0.00 3.35
672 698 6.720309 TCCTCTGATGAACATAAACCAATCA 58.280 36.000 0.00 0.00 0.00 2.57
812 838 7.490725 TGTCCAACAAACACTTTAATCAACATG 59.509 33.333 0.00 0.00 0.00 3.21
917 944 2.301870 TGCTAGAAGGTATATTGGGCCG 59.698 50.000 0.00 0.00 0.00 6.13
919 946 3.616802 GCTAGAAGGTATATTGGGCCGAC 60.617 52.174 0.00 0.00 0.00 4.79
934 961 1.933853 GCCGACATAACTGGATGTGTC 59.066 52.381 2.63 3.16 40.18 3.67
935 962 2.550978 CCGACATAACTGGATGTGTCC 58.449 52.381 2.63 0.00 40.18 4.02
936 963 2.168521 CCGACATAACTGGATGTGTCCT 59.831 50.000 2.63 0.00 45.32 3.85
937 964 3.448686 CGACATAACTGGATGTGTCCTC 58.551 50.000 2.63 0.00 45.32 3.71
938 965 3.119137 CGACATAACTGGATGTGTCCTCA 60.119 47.826 2.63 0.00 45.32 3.86
939 966 4.620567 CGACATAACTGGATGTGTCCTCAA 60.621 45.833 2.63 0.00 45.32 3.02
941 968 5.630121 ACATAACTGGATGTGTCCTCAAAA 58.370 37.500 0.00 0.00 45.32 2.44
942 969 6.068010 ACATAACTGGATGTGTCCTCAAAAA 58.932 36.000 0.00 0.00 45.32 1.94
1690 1761 6.696411 TGTTTTGGATATTTCAATGTGGACC 58.304 36.000 0.00 0.00 0.00 4.46
1744 1816 9.731819 CACACTAAAACGTGTCTATATACATCT 57.268 33.333 0.00 0.00 45.74 2.90
1769 1841 8.099364 TGATTCAGAAAAGTGTTAGAACATCC 57.901 34.615 0.00 0.00 41.59 3.51
2067 2141 7.068593 CCTGATTAATTGTTGCTATTCCCTCAA 59.931 37.037 0.00 0.00 0.00 3.02
2080 2154 4.826274 TTCCCTCAAGTCTCCATAGTTG 57.174 45.455 0.00 0.00 0.00 3.16
2083 2157 2.503356 CCTCAAGTCTCCATAGTTGCCT 59.497 50.000 0.00 0.00 31.15 4.75
2086 2160 4.985538 TCAAGTCTCCATAGTTGCCTTTT 58.014 39.130 0.00 0.00 31.15 2.27
2148 2222 5.251700 ACCTCCTTTGTCTCCATTCTTGTAT 59.748 40.000 0.00 0.00 0.00 2.29
2153 2227 4.503714 TGTCTCCATTCTTGTATTCCCC 57.496 45.455 0.00 0.00 0.00 4.81
2236 2416 6.885735 ATGAGCAAACAAACACACTAAAAC 57.114 33.333 0.00 0.00 0.00 2.43
2435 2621 4.759516 TGAATTTCAACTTTAGGGTCGC 57.240 40.909 0.00 0.00 0.00 5.19
2508 2823 5.112686 CAATTGTCAAGTCCTAGAGTAGCC 58.887 45.833 0.00 0.00 0.00 3.93
2526 2841 0.734889 CCTGGTAATGCTGCTTTCCG 59.265 55.000 3.87 3.93 0.00 4.30
2614 2929 8.637196 TCAGATTTGTCTAGATACGGATGTAT 57.363 34.615 0.00 0.00 43.97 2.29
2636 2951 4.970711 TCTAACACTAGATACTCCCTCCG 58.029 47.826 0.00 0.00 0.00 4.63
2637 2952 3.666345 AACACTAGATACTCCCTCCGT 57.334 47.619 0.00 0.00 0.00 4.69
2638 2953 3.211718 ACACTAGATACTCCCTCCGTC 57.788 52.381 0.00 0.00 0.00 4.79
2639 2954 2.158638 ACACTAGATACTCCCTCCGTCC 60.159 54.545 0.00 0.00 0.00 4.79
2640 2955 1.072015 ACTAGATACTCCCTCCGTCCG 59.928 57.143 0.00 0.00 0.00 4.79
2641 2956 1.347050 CTAGATACTCCCTCCGTCCGA 59.653 57.143 0.00 0.00 0.00 4.55
2642 2957 0.549950 AGATACTCCCTCCGTCCGAA 59.450 55.000 0.00 0.00 0.00 4.30
2643 2958 1.064166 AGATACTCCCTCCGTCCGAAA 60.064 52.381 0.00 0.00 0.00 3.46
2644 2959 1.753073 GATACTCCCTCCGTCCGAAAA 59.247 52.381 0.00 0.00 0.00 2.29
2645 2960 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
2646 2961 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
2647 2962 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
2648 2963 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
2649 2964 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
2650 2965 3.364549 TCCCTCCGTCCGAAAATACTTA 58.635 45.455 0.00 0.00 0.00 2.24
2651 2966 3.962718 TCCCTCCGTCCGAAAATACTTAT 59.037 43.478 0.00 0.00 0.00 1.73
2652 2967 4.038402 TCCCTCCGTCCGAAAATACTTATC 59.962 45.833 0.00 0.00 0.00 1.75
2653 2968 4.202182 CCCTCCGTCCGAAAATACTTATCA 60.202 45.833 0.00 0.00 0.00 2.15
2654 2969 5.510861 CCCTCCGTCCGAAAATACTTATCAT 60.511 44.000 0.00 0.00 0.00 2.45
2655 2970 5.989777 CCTCCGTCCGAAAATACTTATCATT 59.010 40.000 0.00 0.00 0.00 2.57
2656 2971 7.149973 CCTCCGTCCGAAAATACTTATCATTA 58.850 38.462 0.00 0.00 0.00 1.90
2657 2972 7.654520 CCTCCGTCCGAAAATACTTATCATTAA 59.345 37.037 0.00 0.00 0.00 1.40
2658 2973 8.945481 TCCGTCCGAAAATACTTATCATTAAA 57.055 30.769 0.00 0.00 0.00 1.52
2659 2974 9.381033 TCCGTCCGAAAATACTTATCATTAAAA 57.619 29.630 0.00 0.00 0.00 1.52
2708 3023 9.708092 GATGTATTTTAGTTCTAGATACACCCC 57.292 37.037 14.34 8.08 36.40 4.95
2709 3024 8.849543 TGTATTTTAGTTCTAGATACACCCCT 57.150 34.615 0.00 0.00 30.60 4.79
2710 3025 9.275572 TGTATTTTAGTTCTAGATACACCCCTT 57.724 33.333 0.00 0.00 30.60 3.95
2717 3032 7.803131 AGTTCTAGATACACCCCTTTTTATCC 58.197 38.462 0.00 0.00 0.00 2.59
2718 3033 7.404980 AGTTCTAGATACACCCCTTTTTATCCA 59.595 37.037 0.00 0.00 0.00 3.41
2719 3034 7.947782 TCTAGATACACCCCTTTTTATCCAT 57.052 36.000 0.00 0.00 0.00 3.41
2720 3035 8.344939 TCTAGATACACCCCTTTTTATCCATT 57.655 34.615 0.00 0.00 0.00 3.16
2721 3036 8.787818 TCTAGATACACCCCTTTTTATCCATTT 58.212 33.333 0.00 0.00 0.00 2.32
2722 3037 9.421399 CTAGATACACCCCTTTTTATCCATTTT 57.579 33.333 0.00 0.00 0.00 1.82
2723 3038 8.078060 AGATACACCCCTTTTTATCCATTTTG 57.922 34.615 0.00 0.00 0.00 2.44
2724 3039 7.898636 AGATACACCCCTTTTTATCCATTTTGA 59.101 33.333 0.00 0.00 0.00 2.69
2725 3040 6.950860 ACACCCCTTTTTATCCATTTTGAT 57.049 33.333 0.00 0.00 0.00 2.57
2726 3041 6.710278 ACACCCCTTTTTATCCATTTTGATG 58.290 36.000 0.00 0.00 0.00 3.07
2727 3042 6.500049 ACACCCCTTTTTATCCATTTTGATGA 59.500 34.615 0.00 0.00 0.00 2.92
2728 3043 6.818142 CACCCCTTTTTATCCATTTTGATGAC 59.182 38.462 0.00 0.00 0.00 3.06
2729 3044 6.500049 ACCCCTTTTTATCCATTTTGATGACA 59.500 34.615 0.00 0.00 0.00 3.58
2730 3045 7.017056 ACCCCTTTTTATCCATTTTGATGACAA 59.983 33.333 0.00 0.00 0.00 3.18
2731 3046 7.550196 CCCCTTTTTATCCATTTTGATGACAAG 59.450 37.037 0.00 0.00 37.32 3.16
2732 3047 8.096414 CCCTTTTTATCCATTTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
2733 3048 9.492973 CCTTTTTATCCATTTTGATGACAAGTT 57.507 29.630 0.00 0.00 37.32 2.66
2751 3066 2.444281 TTTTTCGGACGGAGGGAGT 58.556 52.632 0.00 0.00 0.00 3.85
2752 3067 1.631405 TTTTTCGGACGGAGGGAGTA 58.369 50.000 0.00 0.00 0.00 2.59
2753 3068 0.890683 TTTTCGGACGGAGGGAGTAC 59.109 55.000 0.00 0.00 0.00 2.73
2754 3069 0.251297 TTTCGGACGGAGGGAGTACA 60.251 55.000 0.00 0.00 0.00 2.90
2755 3070 0.033796 TTCGGACGGAGGGAGTACAT 60.034 55.000 0.00 0.00 0.00 2.29
2756 3071 0.465097 TCGGACGGAGGGAGTACATC 60.465 60.000 0.00 0.00 0.00 3.06
2896 3211 5.295431 TGATTTATCAGCGAACTTGGTTG 57.705 39.130 0.00 0.00 32.11 3.77
3188 3522 7.255277 GGGCCTTGTTAGAAAAGCTATTGATAG 60.255 40.741 0.84 0.00 0.00 2.08
3348 3684 4.592997 TGGAGATCCTGAGAAGTACAGA 57.407 45.455 0.00 0.00 37.54 3.41
3462 3798 7.391148 AGTTGCAAAGGTATTTATTCGTGAT 57.609 32.000 0.00 0.00 0.00 3.06
3466 3802 8.138365 TGCAAAGGTATTTATTCGTGATAGTC 57.862 34.615 0.00 0.00 0.00 2.59
3468 3804 8.488764 GCAAAGGTATTTATTCGTGATAGTCTC 58.511 37.037 0.00 0.00 0.00 3.36
3469 3805 9.751542 CAAAGGTATTTATTCGTGATAGTCTCT 57.248 33.333 0.00 0.00 0.00 3.10
3472 3808 9.012161 AGGTATTTATTCGTGATAGTCTCTACC 57.988 37.037 0.00 0.00 0.00 3.18
3473 3809 8.242739 GGTATTTATTCGTGATAGTCTCTACCC 58.757 40.741 0.00 0.00 0.00 3.69
3474 3810 9.012161 GTATTTATTCGTGATAGTCTCTACCCT 57.988 37.037 0.00 0.00 0.00 4.34
3475 3811 6.879276 TTATTCGTGATAGTCTCTACCCTG 57.121 41.667 0.00 0.00 0.00 4.45
3476 3812 3.928005 TCGTGATAGTCTCTACCCTGT 57.072 47.619 0.00 0.00 0.00 4.00
3477 3813 4.232188 TCGTGATAGTCTCTACCCTGTT 57.768 45.455 0.00 0.00 0.00 3.16
3478 3814 3.945921 TCGTGATAGTCTCTACCCTGTTG 59.054 47.826 0.00 0.00 0.00 3.33
3556 3923 8.641499 TGTTTCAACCAAGTTTGAATATGTTC 57.359 30.769 0.00 0.00 43.38 3.18
3678 4045 2.029838 ACCGATTGCTCCTGATCAAC 57.970 50.000 0.00 0.00 0.00 3.18
3829 4197 0.250553 TAGTTGGGGAACTTGCACGG 60.251 55.000 0.00 0.00 34.37 4.94
3914 4282 3.001838 CGCTGCGGTAATAGCAAAATGTA 59.998 43.478 15.40 0.00 44.67 2.29
3927 4295 3.672867 GCAAAATGTAAATGACCACCACG 59.327 43.478 0.00 0.00 0.00 4.94
3962 4330 2.492088 TGTGATCACTTGTAGGGAGTCG 59.508 50.000 25.55 0.00 26.79 4.18
4031 4399 0.956633 TCACGTTGTCGAGCTTAGGT 59.043 50.000 0.00 0.00 40.62 3.08
4055 4423 2.623416 CACAGGGTTCAAAAGGAAGTCC 59.377 50.000 0.00 0.00 35.82 3.85
4106 4474 1.968493 TGTAAGTTCTTCCAGGCTCGT 59.032 47.619 0.00 0.00 0.00 4.18
4112 4480 3.071167 AGTTCTTCCAGGCTCGTAAACTT 59.929 43.478 0.00 0.00 0.00 2.66
4138 4506 5.012561 AGCTTATCAGAAAGTTCCAGTGACT 59.987 40.000 0.00 0.00 0.00 3.41
4139 4507 5.703130 GCTTATCAGAAAGTTCCAGTGACTT 59.297 40.000 0.00 0.00 38.92 3.01
4174 4542 4.393371 GTGGCACTTTCAGATTAGAGGTTC 59.607 45.833 11.13 0.00 0.00 3.62
4180 4548 8.608317 GCACTTTCAGATTAGAGGTTCTATTTC 58.392 37.037 0.00 0.00 0.00 2.17
4181 4549 8.812329 CACTTTCAGATTAGAGGTTCTATTTCG 58.188 37.037 0.00 0.00 0.00 3.46
4182 4550 8.532819 ACTTTCAGATTAGAGGTTCTATTTCGT 58.467 33.333 0.00 0.00 0.00 3.85
4274 4642 4.722700 CCGGTGGCCAAGACTGGG 62.723 72.222 7.24 0.00 43.74 4.45
4282 4650 1.559682 GGCCAAGACTGGGTCAGATAA 59.440 52.381 0.00 0.00 43.74 1.75
4348 4716 3.594603 ACATCCAACTCCTGAACTACG 57.405 47.619 0.00 0.00 0.00 3.51
4353 4721 0.037232 AACTCCTGAACTACGCAGCC 60.037 55.000 0.00 0.00 32.06 4.85
4515 4883 2.232399 TCATCATGCCAATATGCGCTT 58.768 42.857 9.73 4.59 0.00 4.68
4548 4916 5.293079 GCTAAGCCATGAAGAACAGAGTTAG 59.707 44.000 0.00 0.00 0.00 2.34
4561 4929 3.127895 ACAGAGTTAGAAGCTCTACTGCG 59.872 47.826 0.00 0.00 40.97 5.18
4629 4997 0.802607 GAGGATCGTGGCGTCAGTTC 60.803 60.000 0.00 0.00 0.00 3.01
4827 5195 1.930908 GCAGCTCAGGAACATGTGGC 61.931 60.000 0.00 0.00 0.00 5.01
4828 5196 0.607217 CAGCTCAGGAACATGTGGCA 60.607 55.000 0.00 0.00 0.00 4.92
4829 5197 0.322277 AGCTCAGGAACATGTGGCAG 60.322 55.000 0.00 0.00 0.00 4.85
4830 5198 1.930908 GCTCAGGAACATGTGGCAGC 61.931 60.000 0.00 0.00 0.00 5.25
4831 5199 1.303561 TCAGGAACATGTGGCAGCC 60.304 57.895 3.66 3.66 0.00 4.85
4832 5200 1.604308 CAGGAACATGTGGCAGCCA 60.604 57.895 11.22 11.22 0.00 4.75
4833 5201 0.968901 CAGGAACATGTGGCAGCCAT 60.969 55.000 19.75 0.00 35.28 4.40
4834 5202 0.682209 AGGAACATGTGGCAGCCATC 60.682 55.000 19.75 10.65 35.28 3.51
4835 5203 1.669999 GGAACATGTGGCAGCCATCC 61.670 60.000 19.75 16.49 35.28 3.51
4836 5204 0.682209 GAACATGTGGCAGCCATCCT 60.682 55.000 19.75 2.06 35.28 3.24
4837 5205 0.968901 AACATGTGGCAGCCATCCTG 60.969 55.000 19.75 17.19 44.67 3.86
4838 5206 1.077285 CATGTGGCAGCCATCCTGA 60.077 57.895 19.75 0.00 44.64 3.86
4839 5207 1.101635 CATGTGGCAGCCATCCTGAG 61.102 60.000 19.75 1.02 44.64 3.35
4840 5208 1.276859 ATGTGGCAGCCATCCTGAGA 61.277 55.000 19.75 0.00 44.64 3.27
4841 5209 1.300963 GTGGCAGCCATCCTGAGAA 59.699 57.895 19.75 0.00 44.64 2.87
4842 5210 0.747283 GTGGCAGCCATCCTGAGAAG 60.747 60.000 19.75 0.00 44.64 2.85
4843 5211 1.153005 GGCAGCCATCCTGAGAAGG 60.153 63.158 6.55 0.00 44.64 3.46
4847 5215 4.972875 CCATCCTGAGAAGGCACC 57.027 61.111 0.00 0.00 0.00 5.01
4848 5216 1.225704 CCATCCTGAGAAGGCACCC 59.774 63.158 0.00 0.00 0.00 4.61
4849 5217 1.225704 CATCCTGAGAAGGCACCCC 59.774 63.158 0.00 0.00 0.00 4.95
4850 5218 2.003548 ATCCTGAGAAGGCACCCCC 61.004 63.158 0.00 0.00 0.00 5.40
4852 5220 2.673523 CTGAGAAGGCACCCCCTG 59.326 66.667 0.00 0.00 45.62 4.45
4853 5221 3.635268 CTGAGAAGGCACCCCCTGC 62.635 68.421 0.00 0.00 45.62 4.85
4861 5229 4.764771 CACCCCCTGCACCCATGG 62.765 72.222 4.14 4.14 0.00 3.66
4865 5233 4.468769 CCCTGCACCCATGGGCAT 62.469 66.667 31.73 9.80 39.65 4.40
4866 5234 2.602438 CCTGCACCCATGGGCATA 59.398 61.111 31.73 15.54 39.65 3.14
4867 5235 1.154454 CCTGCACCCATGGGCATAT 59.846 57.895 31.73 8.48 39.65 1.78
4868 5236 1.183030 CCTGCACCCATGGGCATATG 61.183 60.000 31.73 21.79 39.65 1.78
4869 5237 1.812686 CTGCACCCATGGGCATATGC 61.813 60.000 31.73 30.01 39.65 3.14
4870 5238 1.833492 GCACCCATGGGCATATGCA 60.833 57.895 29.94 10.14 44.36 3.96
4871 5239 2.043625 CACCCATGGGCATATGCAC 58.956 57.895 31.73 25.88 46.69 4.57
4872 5240 1.152483 ACCCATGGGCATATGCACC 60.152 57.895 31.73 23.82 45.73 5.01
4873 5241 1.909781 CCCATGGGCATATGCACCC 60.910 63.158 26.74 19.95 45.73 4.61
4880 5248 2.837498 GGGCATATGCACCCAATTTTC 58.163 47.619 28.07 7.31 46.22 2.29
4881 5249 2.170187 GGGCATATGCACCCAATTTTCA 59.830 45.455 28.07 0.00 46.22 2.69
4882 5250 3.370315 GGGCATATGCACCCAATTTTCAA 60.370 43.478 28.07 0.00 46.22 2.69
4883 5251 4.260170 GGCATATGCACCCAATTTTCAAA 58.740 39.130 28.07 0.00 44.36 2.69
4884 5252 4.699257 GGCATATGCACCCAATTTTCAAAA 59.301 37.500 28.07 0.00 44.36 2.44
4885 5253 5.182760 GGCATATGCACCCAATTTTCAAAAA 59.817 36.000 28.07 0.00 44.36 1.94
4952 5320 7.643569 AAAATATCAGGCATACATGTTCACA 57.356 32.000 2.30 0.00 0.00 3.58
4953 5321 7.643569 AAATATCAGGCATACATGTTCACAA 57.356 32.000 2.30 0.00 0.00 3.33
4954 5322 7.643569 AATATCAGGCATACATGTTCACAAA 57.356 32.000 2.30 0.00 0.00 2.83
4955 5323 7.828508 ATATCAGGCATACATGTTCACAAAT 57.171 32.000 2.30 0.00 0.00 2.32
4956 5324 5.313520 TCAGGCATACATGTTCACAAATG 57.686 39.130 2.30 1.18 0.00 2.32
4957 5325 4.766373 TCAGGCATACATGTTCACAAATGT 59.234 37.500 2.30 0.00 40.13 2.71
4958 5326 4.860352 CAGGCATACATGTTCACAAATGTG 59.140 41.667 2.30 7.22 46.91 3.21
4959 5327 4.523943 AGGCATACATGTTCACAAATGTGT 59.476 37.500 2.30 0.00 45.76 3.72
4969 5337 1.242989 ACAAATGTGTGTATGCGGCA 58.757 45.000 4.58 4.58 36.31 5.69
4970 5338 1.068610 ACAAATGTGTGTATGCGGCAC 60.069 47.619 4.03 0.00 36.31 5.01
4971 5339 1.068679 CAAATGTGTGTATGCGGCACA 60.069 47.619 4.03 11.88 45.48 4.57
4972 5340 1.242989 AATGTGTGTATGCGGCACAA 58.757 45.000 4.03 0.00 46.65 3.33
4973 5341 1.242989 ATGTGTGTATGCGGCACAAA 58.757 45.000 4.03 5.17 46.65 2.83
4974 5342 0.590682 TGTGTGTATGCGGCACAAAG 59.409 50.000 4.03 0.00 46.65 2.77
4975 5343 0.591170 GTGTGTATGCGGCACAAAGT 59.409 50.000 4.03 0.00 46.65 2.66
4976 5344 1.001815 GTGTGTATGCGGCACAAAGTT 60.002 47.619 4.03 0.00 46.65 2.66
4977 5345 1.678627 TGTGTATGCGGCACAAAGTTT 59.321 42.857 4.03 0.00 42.96 2.66
4978 5346 2.099921 TGTGTATGCGGCACAAAGTTTT 59.900 40.909 4.03 0.00 42.96 2.43
4979 5347 2.470999 GTGTATGCGGCACAAAGTTTTG 59.529 45.455 4.03 3.17 43.62 2.44
4996 5364 9.786105 CAAAGTTTTGTGCAAAAATATCCTTTT 57.214 25.926 2.11 0.00 41.37 2.27
4997 5365 9.786105 AAAGTTTTGTGCAAAAATATCCTTTTG 57.214 25.926 2.11 7.85 45.21 2.44
4998 5366 8.504812 AGTTTTGTGCAAAAATATCCTTTTGT 57.495 26.923 2.11 0.00 44.57 2.83
4999 5367 8.955388 AGTTTTGTGCAAAAATATCCTTTTGTT 58.045 25.926 2.11 0.00 44.57 2.83
5000 5368 9.566530 GTTTTGTGCAAAAATATCCTTTTGTTT 57.433 25.926 2.11 0.00 44.57 2.83
5002 5370 9.565213 TTTGTGCAAAAATATCCTTTTGTTTTG 57.435 25.926 12.13 7.84 44.57 2.44
5003 5371 8.273780 TGTGCAAAAATATCCTTTTGTTTTGT 57.726 26.923 12.13 0.00 44.57 2.83
5004 5372 8.394121 TGTGCAAAAATATCCTTTTGTTTTGTC 58.606 29.630 12.13 5.07 44.57 3.18
5005 5373 8.611757 GTGCAAAAATATCCTTTTGTTTTGTCT 58.388 29.630 12.13 0.00 44.57 3.41
5006 5374 8.825745 TGCAAAAATATCCTTTTGTTTTGTCTC 58.174 29.630 12.13 0.00 44.57 3.36
5007 5375 8.282592 GCAAAAATATCCTTTTGTTTTGTCTCC 58.717 33.333 12.13 0.00 44.57 3.71
5008 5376 8.487176 CAAAAATATCCTTTTGTTTTGTCTCCG 58.513 33.333 4.96 0.00 40.09 4.63
5009 5377 6.894339 AATATCCTTTTGTTTTGTCTCCGT 57.106 33.333 0.00 0.00 0.00 4.69
5010 5378 7.989416 AATATCCTTTTGTTTTGTCTCCGTA 57.011 32.000 0.00 0.00 0.00 4.02
5011 5379 7.989416 ATATCCTTTTGTTTTGTCTCCGTAA 57.011 32.000 0.00 0.00 0.00 3.18
5012 5380 6.702716 ATCCTTTTGTTTTGTCTCCGTAAA 57.297 33.333 0.00 0.00 0.00 2.01
5013 5381 6.512342 TCCTTTTGTTTTGTCTCCGTAAAA 57.488 33.333 0.00 0.00 0.00 1.52
5014 5382 6.921914 TCCTTTTGTTTTGTCTCCGTAAAAA 58.078 32.000 0.00 0.00 0.00 1.94
5037 5405 9.651913 AAAAAGACAAATTTCAGTGCTTCTAAA 57.348 25.926 0.00 0.00 0.00 1.85
5038 5406 9.822185 AAAAGACAAATTTCAGTGCTTCTAAAT 57.178 25.926 0.00 0.00 0.00 1.40
5041 5409 9.289782 AGACAAATTTCAGTGCTTCTAAATAGT 57.710 29.630 0.00 0.00 0.00 2.12
5042 5410 9.334693 GACAAATTTCAGTGCTTCTAAATAGTG 57.665 33.333 0.00 0.00 0.00 2.74
5043 5411 8.850156 ACAAATTTCAGTGCTTCTAAATAGTGT 58.150 29.630 0.00 0.00 0.00 3.55
5044 5412 9.683069 CAAATTTCAGTGCTTCTAAATAGTGTT 57.317 29.630 0.00 0.00 0.00 3.32
5046 5414 9.899226 AATTTCAGTGCTTCTAAATAGTGTTTC 57.101 29.630 0.00 0.00 0.00 2.78
5047 5415 8.445275 TTTCAGTGCTTCTAAATAGTGTTTCA 57.555 30.769 0.00 0.00 0.00 2.69
5048 5416 7.421530 TCAGTGCTTCTAAATAGTGTTTCAC 57.578 36.000 0.00 0.00 34.10 3.18
5049 5417 6.426937 TCAGTGCTTCTAAATAGTGTTTCACC 59.573 38.462 0.00 0.00 34.49 4.02
5050 5418 5.705905 AGTGCTTCTAAATAGTGTTTCACCC 59.294 40.000 0.00 0.00 34.49 4.61
5051 5419 5.472137 GTGCTTCTAAATAGTGTTTCACCCA 59.528 40.000 0.00 0.00 34.49 4.51
5052 5420 6.151144 GTGCTTCTAAATAGTGTTTCACCCAT 59.849 38.462 0.00 0.00 34.49 4.00
5053 5421 7.335924 GTGCTTCTAAATAGTGTTTCACCCATA 59.664 37.037 0.00 0.00 34.49 2.74
5054 5422 7.885922 TGCTTCTAAATAGTGTTTCACCCATAA 59.114 33.333 0.00 0.00 34.49 1.90
5055 5423 8.903820 GCTTCTAAATAGTGTTTCACCCATAAT 58.096 33.333 0.00 0.00 34.49 1.28
5062 5430 9.705290 AATAGTGTTTCACCCATAATTTTTGTC 57.295 29.630 0.00 0.00 34.49 3.18
5063 5431 7.360113 AGTGTTTCACCCATAATTTTTGTCT 57.640 32.000 0.00 0.00 34.49 3.41
5064 5432 7.791029 AGTGTTTCACCCATAATTTTTGTCTT 58.209 30.769 0.00 0.00 34.49 3.01
5065 5433 8.264347 AGTGTTTCACCCATAATTTTTGTCTTT 58.736 29.630 0.00 0.00 34.49 2.52
5066 5434 8.888716 GTGTTTCACCCATAATTTTTGTCTTTT 58.111 29.630 0.00 0.00 0.00 2.27
5067 5435 9.454859 TGTTTCACCCATAATTTTTGTCTTTTT 57.545 25.926 0.00 0.00 0.00 1.94
5084 5452 3.325293 TTTTTGCACAAGCCACAGAAA 57.675 38.095 0.00 0.00 41.13 2.52
5085 5453 3.325293 TTTTGCACAAGCCACAGAAAA 57.675 38.095 0.00 0.00 41.13 2.29
5086 5454 3.325293 TTTGCACAAGCCACAGAAAAA 57.675 38.095 0.00 0.00 41.13 1.94
5087 5455 3.540314 TTGCACAAGCCACAGAAAAAT 57.460 38.095 0.00 0.00 41.13 1.82
5088 5456 3.096489 TGCACAAGCCACAGAAAAATC 57.904 42.857 0.00 0.00 41.13 2.17
5089 5457 2.694628 TGCACAAGCCACAGAAAAATCT 59.305 40.909 0.00 0.00 41.13 2.40
5090 5458 3.888323 TGCACAAGCCACAGAAAAATCTA 59.112 39.130 0.00 0.00 41.13 1.98
5091 5459 4.523943 TGCACAAGCCACAGAAAAATCTAT 59.476 37.500 0.00 0.00 41.13 1.98
5092 5460 5.010922 TGCACAAGCCACAGAAAAATCTATT 59.989 36.000 0.00 0.00 41.13 1.73
5093 5461 5.928264 GCACAAGCCACAGAAAAATCTATTT 59.072 36.000 0.00 0.00 33.58 1.40
5094 5462 6.424812 GCACAAGCCACAGAAAAATCTATTTT 59.575 34.615 0.00 0.00 36.82 1.82
5095 5463 7.041848 GCACAAGCCACAGAAAAATCTATTTTT 60.042 33.333 12.07 12.07 42.28 1.94
5116 5484 2.308347 CGTGAAACTTTATGCACGCA 57.692 45.000 0.00 0.00 45.81 5.24
5117 5485 1.969256 CGTGAAACTTTATGCACGCAC 59.031 47.619 0.00 0.00 45.81 5.34
5118 5486 2.601029 CGTGAAACTTTATGCACGCACA 60.601 45.455 0.00 0.00 45.81 4.57
5119 5487 3.564511 GTGAAACTTTATGCACGCACAT 58.435 40.909 0.00 0.00 0.00 3.21
5120 5488 3.603770 GTGAAACTTTATGCACGCACATC 59.396 43.478 0.00 0.00 0.00 3.06
5121 5489 2.525750 AACTTTATGCACGCACATCG 57.474 45.000 0.00 0.00 45.38 3.84
5122 5490 1.720805 ACTTTATGCACGCACATCGA 58.279 45.000 0.00 0.00 41.67 3.59
5123 5491 2.073056 ACTTTATGCACGCACATCGAA 58.927 42.857 0.00 0.00 41.67 3.71
5124 5492 2.677836 ACTTTATGCACGCACATCGAAT 59.322 40.909 0.00 0.00 41.67 3.34
5125 5493 3.868661 ACTTTATGCACGCACATCGAATA 59.131 39.130 0.00 0.00 41.67 1.75
5126 5494 4.511454 ACTTTATGCACGCACATCGAATAT 59.489 37.500 0.00 0.00 41.67 1.28
5127 5495 2.955607 ATGCACGCACATCGAATATG 57.044 45.000 0.00 0.00 41.67 1.78
5128 5496 0.936600 TGCACGCACATCGAATATGG 59.063 50.000 0.00 0.00 41.67 2.74
5129 5497 1.217001 GCACGCACATCGAATATGGA 58.783 50.000 0.00 0.00 41.67 3.41
5130 5498 1.070577 GCACGCACATCGAATATGGAC 60.071 52.381 0.00 0.00 41.67 4.02
5131 5499 2.200899 CACGCACATCGAATATGGACA 58.799 47.619 0.00 0.00 41.67 4.02
5132 5500 2.033747 CACGCACATCGAATATGGACAC 60.034 50.000 0.00 0.00 41.67 3.67
5133 5501 1.190103 CGCACATCGAATATGGACACG 59.810 52.381 0.00 0.00 41.67 4.49
5134 5502 2.201732 GCACATCGAATATGGACACGT 58.798 47.619 0.00 0.00 0.00 4.49
5135 5503 3.377439 GCACATCGAATATGGACACGTA 58.623 45.455 0.00 0.00 0.00 3.57
5136 5504 3.181774 GCACATCGAATATGGACACGTAC 59.818 47.826 0.00 0.00 0.00 3.67
5137 5505 3.734231 CACATCGAATATGGACACGTACC 59.266 47.826 0.00 4.30 0.00 3.34
5138 5506 3.635373 ACATCGAATATGGACACGTACCT 59.365 43.478 11.33 1.89 0.00 3.08
5139 5507 3.703286 TCGAATATGGACACGTACCTG 57.297 47.619 11.33 0.00 0.00 4.00
5140 5508 3.018856 TCGAATATGGACACGTACCTGT 58.981 45.455 11.33 0.00 0.00 4.00
5141 5509 3.113322 CGAATATGGACACGTACCTGTG 58.887 50.000 2.00 0.90 45.41 3.66
5142 5510 2.596904 ATATGGACACGTACCTGTGC 57.403 50.000 9.09 9.09 43.74 4.57
5143 5511 1.258676 TATGGACACGTACCTGTGCA 58.741 50.000 18.40 18.40 45.31 4.57
5144 5512 0.394938 ATGGACACGTACCTGTGCAA 59.605 50.000 19.58 7.05 44.53 4.08
5145 5513 0.531090 TGGACACGTACCTGTGCAAC 60.531 55.000 14.90 1.39 43.74 4.17
5185 5553 9.995003 ATTAGCATTTAGAAATGTGTTTTTCCA 57.005 25.926 14.72 0.00 45.77 3.53
5186 5554 9.823647 TTAGCATTTAGAAATGTGTTTTTCCAA 57.176 25.926 14.72 0.00 45.77 3.53
5187 5555 8.729805 AGCATTTAGAAATGTGTTTTTCCAAA 57.270 26.923 14.72 0.00 45.77 3.28
5188 5556 8.829612 AGCATTTAGAAATGTGTTTTTCCAAAG 58.170 29.630 14.72 0.00 45.77 2.77
5189 5557 8.611757 GCATTTAGAAATGTGTTTTTCCAAAGT 58.388 29.630 14.72 0.00 45.77 2.66
5190 5558 9.919348 CATTTAGAAATGTGTTTTTCCAAAGTG 57.081 29.630 6.79 0.00 40.61 3.16
5191 5559 8.485976 TTTAGAAATGTGTTTTTCCAAAGTGG 57.514 30.769 0.00 0.00 36.47 4.00
5192 5560 5.427378 AGAAATGTGTTTTTCCAAAGTGGG 58.573 37.500 0.00 0.00 38.32 4.61
5193 5561 4.835284 AATGTGTTTTTCCAAAGTGGGT 57.165 36.364 0.00 0.00 38.32 4.51
5194 5562 4.835284 ATGTGTTTTTCCAAAGTGGGTT 57.165 36.364 0.00 0.00 38.32 4.11
5195 5563 4.195225 TGTGTTTTTCCAAAGTGGGTTC 57.805 40.909 0.00 0.00 38.32 3.62
5196 5564 3.578716 TGTGTTTTTCCAAAGTGGGTTCA 59.421 39.130 0.00 0.00 38.32 3.18
5197 5565 4.223923 TGTGTTTTTCCAAAGTGGGTTCAT 59.776 37.500 0.00 0.00 38.32 2.57
5198 5566 5.422331 TGTGTTTTTCCAAAGTGGGTTCATA 59.578 36.000 0.00 0.00 38.32 2.15
5199 5567 6.098982 TGTGTTTTTCCAAAGTGGGTTCATAT 59.901 34.615 0.00 0.00 38.32 1.78
5200 5568 6.423604 GTGTTTTTCCAAAGTGGGTTCATATG 59.576 38.462 0.00 0.00 38.32 1.78
5201 5569 6.098982 TGTTTTTCCAAAGTGGGTTCATATGT 59.901 34.615 1.90 0.00 38.32 2.29
5202 5570 7.287927 TGTTTTTCCAAAGTGGGTTCATATGTA 59.712 33.333 1.90 0.00 38.32 2.29
5203 5571 6.827586 TTTCCAAAGTGGGTTCATATGTAC 57.172 37.500 1.90 3.04 38.32 2.90
5204 5572 4.850680 TCCAAAGTGGGTTCATATGTACC 58.149 43.478 20.26 20.26 38.32 3.34
5215 5583 5.940470 GGTTCATATGTACCCTGATTCATCC 59.060 44.000 18.28 0.00 30.30 3.51
5216 5584 6.465751 GGTTCATATGTACCCTGATTCATCCA 60.466 42.308 18.28 0.00 30.30 3.41
5217 5585 6.957853 TCATATGTACCCTGATTCATCCAT 57.042 37.500 1.90 0.00 0.00 3.41
5218 5586 6.714278 TCATATGTACCCTGATTCATCCATG 58.286 40.000 1.90 0.00 0.00 3.66
5219 5587 3.213206 TGTACCCTGATTCATCCATGC 57.787 47.619 0.00 0.00 0.00 4.06
5220 5588 2.509131 TGTACCCTGATTCATCCATGCA 59.491 45.455 0.00 0.00 0.00 3.96
5221 5589 2.062971 ACCCTGATTCATCCATGCAC 57.937 50.000 0.00 0.00 0.00 4.57
5222 5590 1.567649 ACCCTGATTCATCCATGCACT 59.432 47.619 0.00 0.00 0.00 4.40
5223 5591 2.024655 ACCCTGATTCATCCATGCACTT 60.025 45.455 0.00 0.00 0.00 3.16
5224 5592 2.621998 CCCTGATTCATCCATGCACTTC 59.378 50.000 0.00 0.00 0.00 3.01
5225 5593 2.621998 CCTGATTCATCCATGCACTTCC 59.378 50.000 0.00 0.00 0.00 3.46
5268 5636 4.778143 GTAGGGCCACGGTGCTGG 62.778 72.222 6.18 0.00 0.00 4.85
5272 5640 4.722700 GGCCACGGTGCTGGATGT 62.723 66.667 1.68 0.00 32.30 3.06
5273 5641 2.672996 GCCACGGTGCTGGATGTT 60.673 61.111 1.68 0.00 32.30 2.71
5274 5642 2.690778 GCCACGGTGCTGGATGTTC 61.691 63.158 1.68 0.00 32.30 3.18
5275 5643 2.390599 CCACGGTGCTGGATGTTCG 61.391 63.158 1.68 0.00 32.30 3.95
5276 5644 2.742372 ACGGTGCTGGATGTTCGC 60.742 61.111 0.00 0.00 0.00 4.70
5277 5645 2.434884 CGGTGCTGGATGTTCGCT 60.435 61.111 0.00 0.00 0.00 4.93
5278 5646 2.456119 CGGTGCTGGATGTTCGCTC 61.456 63.158 0.00 0.00 0.00 5.03
5279 5647 2.456119 GGTGCTGGATGTTCGCTCG 61.456 63.158 0.00 0.00 0.00 5.03
5280 5648 2.815211 TGCTGGATGTTCGCTCGC 60.815 61.111 0.00 0.00 0.00 5.03
5281 5649 2.815211 GCTGGATGTTCGCTCGCA 60.815 61.111 0.00 0.00 0.00 5.10
5282 5650 2.806856 GCTGGATGTTCGCTCGCAG 61.807 63.158 0.00 0.00 0.00 5.18
5283 5651 2.125552 TGGATGTTCGCTCGCAGG 60.126 61.111 0.00 0.00 0.00 4.85
5284 5652 2.892425 GGATGTTCGCTCGCAGGG 60.892 66.667 0.00 0.00 0.00 4.45
5285 5653 2.892425 GATGTTCGCTCGCAGGGG 60.892 66.667 0.00 0.00 0.00 4.79
5296 5664 4.982701 GCAGGGGCAGGCTGTTGT 62.983 66.667 17.16 0.00 40.72 3.32
5297 5665 2.987547 CAGGGGCAGGCTGTTGTG 60.988 66.667 17.16 5.21 0.00 3.33
5298 5666 4.290622 AGGGGCAGGCTGTTGTGG 62.291 66.667 17.16 0.00 0.00 4.17
5299 5667 4.603535 GGGGCAGGCTGTTGTGGT 62.604 66.667 17.16 0.00 0.00 4.16
5300 5668 2.985847 GGGCAGGCTGTTGTGGTC 60.986 66.667 17.16 0.00 0.00 4.02
5301 5669 2.203337 GGCAGGCTGTTGTGGTCA 60.203 61.111 17.16 0.00 0.00 4.02
5302 5670 1.827789 GGCAGGCTGTTGTGGTCAA 60.828 57.895 17.16 0.00 0.00 3.18
5303 5671 1.391157 GGCAGGCTGTTGTGGTCAAA 61.391 55.000 17.16 0.00 35.20 2.69
5304 5672 0.031178 GCAGGCTGTTGTGGTCAAAG 59.969 55.000 17.16 0.00 35.20 2.77
5305 5673 0.031178 CAGGCTGTTGTGGTCAAAGC 59.969 55.000 6.28 0.00 37.18 3.51
5306 5674 1.008538 GGCTGTTGTGGTCAAAGCG 60.009 57.895 0.00 0.00 37.93 4.68
5307 5675 1.658409 GCTGTTGTGGTCAAAGCGC 60.658 57.895 0.00 0.00 35.20 5.92
5308 5676 1.008538 CTGTTGTGGTCAAAGCGCC 60.009 57.895 2.29 0.00 35.20 6.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 5.409826 CCAGCCTACATTTATCCGAAAGATC 59.590 44.000 0.00 0.00 36.33 2.75
83 86 4.451629 TTGGAACTCGAGTGTATTCCTC 57.548 45.455 26.50 16.21 41.11 3.71
163 166 6.800408 CACAAGAAATGCATGAGACAAGTAAG 59.200 38.462 0.00 0.00 0.00 2.34
381 395 9.891535 GATTCTGAAATTTAATCGCAACATTTC 57.108 29.630 0.00 0.00 35.35 2.17
452 470 7.644551 GTGACTACTGACTACATAGTTGTATGC 59.355 40.741 0.00 0.00 39.94 3.14
573 595 4.997395 GCAAAGACCCGTCATCACATATAT 59.003 41.667 0.00 0.00 0.00 0.86
654 680 6.798482 TCAGCATGATTGGTTTATGTTCATC 58.202 36.000 0.00 0.00 42.56 2.92
672 698 8.414003 TCTCTGTTCTTAATACGTTATCAGCAT 58.586 33.333 0.00 0.00 0.00 3.79
701 727 5.907197 TGTTGTCTGTCGATTTCTTTCTC 57.093 39.130 0.00 0.00 0.00 2.87
786 812 6.925211 TGTTGATTAAAGTGTTTGTTGGACA 58.075 32.000 0.00 0.00 0.00 4.02
941 968 2.638363 ACGGTAGAGCCTCTTCCTTTTT 59.362 45.455 14.57 0.00 32.45 1.94
942 969 2.258109 ACGGTAGAGCCTCTTCCTTTT 58.742 47.619 14.57 0.00 32.45 2.27
943 970 1.939980 ACGGTAGAGCCTCTTCCTTT 58.060 50.000 14.57 0.00 32.45 3.11
945 972 1.939980 AAACGGTAGAGCCTCTTCCT 58.060 50.000 14.57 0.63 32.45 3.36
946 973 2.619147 GAAAACGGTAGAGCCTCTTCC 58.381 52.381 7.30 7.30 31.42 3.46
947 974 2.260481 CGAAAACGGTAGAGCCTCTTC 58.740 52.381 0.00 0.00 34.25 2.87
1690 1761 7.809665 TGTTCACTCATTTCAATCTGTATGTG 58.190 34.615 0.00 0.00 0.00 3.21
1744 1816 7.939039 AGGATGTTCTAACACTTTTCTGAATCA 59.061 33.333 0.00 0.00 42.51 2.57
1757 1829 9.093970 CGTTCACAAATATAGGATGTTCTAACA 57.906 33.333 0.00 0.00 44.06 2.41
1769 1841 6.923508 TGCTATCACTCCGTTCACAAATATAG 59.076 38.462 0.00 0.00 0.00 1.31
2119 2193 0.840722 GGAGACAAAGGAGGTGGGGA 60.841 60.000 0.00 0.00 0.00 4.81
2120 2194 1.133809 TGGAGACAAAGGAGGTGGGG 61.134 60.000 0.00 0.00 37.44 4.96
2121 2195 2.463441 TGGAGACAAAGGAGGTGGG 58.537 57.895 0.00 0.00 37.44 4.61
2153 2227 7.927629 CCAAAACATCTTATAATGGTGAATGGG 59.072 37.037 3.21 0.00 28.85 4.00
2236 2416 9.516314 TTTCTAAATCAGATGTATGTAGACACG 57.484 33.333 0.00 0.00 31.77 4.49
2508 2823 1.131126 CACGGAAAGCAGCATTACCAG 59.869 52.381 0.00 0.00 0.00 4.00
2526 2841 2.941453 TCAGCGAATCCAGTACTCAC 57.059 50.000 0.00 0.00 0.00 3.51
2583 2898 8.622157 TCCGTATCTAGACAAATCTGAGTTAAG 58.378 37.037 0.00 0.00 36.29 1.85
2586 2901 7.068839 ACATCCGTATCTAGACAAATCTGAGTT 59.931 37.037 0.00 0.00 36.29 3.01
2614 2929 4.411540 ACGGAGGGAGTATCTAGTGTTAGA 59.588 45.833 0.00 0.00 40.10 2.10
2615 2930 4.716794 ACGGAGGGAGTATCTAGTGTTAG 58.283 47.826 0.00 0.00 33.73 2.34
2616 2931 4.445448 GGACGGAGGGAGTATCTAGTGTTA 60.445 50.000 0.00 0.00 33.73 2.41
2617 2932 3.553904 GACGGAGGGAGTATCTAGTGTT 58.446 50.000 0.00 0.00 33.73 3.32
2618 2933 2.158638 GGACGGAGGGAGTATCTAGTGT 60.159 54.545 0.00 0.00 33.73 3.55
2619 2934 2.506444 GGACGGAGGGAGTATCTAGTG 58.494 57.143 0.00 0.00 33.73 2.74
2620 2935 1.072015 CGGACGGAGGGAGTATCTAGT 59.928 57.143 0.00 0.00 33.73 2.57
2621 2936 1.347050 TCGGACGGAGGGAGTATCTAG 59.653 57.143 0.00 0.00 33.73 2.43
2622 2937 1.427809 TCGGACGGAGGGAGTATCTA 58.572 55.000 0.00 0.00 33.73 1.98
2623 2938 0.549950 TTCGGACGGAGGGAGTATCT 59.450 55.000 0.00 0.00 33.73 1.98
2624 2939 1.396653 TTTCGGACGGAGGGAGTATC 58.603 55.000 0.00 0.00 0.00 2.24
2625 2940 1.856629 TTTTCGGACGGAGGGAGTAT 58.143 50.000 0.00 0.00 0.00 2.12
2626 2941 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
2627 2942 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
2628 2943 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
2629 2944 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
2630 2945 2.685850 AAGTATTTTCGGACGGAGGG 57.314 50.000 0.00 0.00 0.00 4.30
2631 2946 4.940463 TGATAAGTATTTTCGGACGGAGG 58.060 43.478 0.00 0.00 0.00 4.30
2632 2947 8.583810 TTAATGATAAGTATTTTCGGACGGAG 57.416 34.615 0.00 0.00 0.00 4.63
2633 2948 8.945481 TTTAATGATAAGTATTTTCGGACGGA 57.055 30.769 0.00 0.00 0.00 4.69
2682 2997 9.708092 GGGGTGTATCTAGAACTAAAATACATC 57.292 37.037 0.00 13.73 35.81 3.06
2683 2998 9.448587 AGGGGTGTATCTAGAACTAAAATACAT 57.551 33.333 0.00 3.35 35.81 2.29
2684 2999 8.849543 AGGGGTGTATCTAGAACTAAAATACA 57.150 34.615 0.00 0.00 32.07 2.29
2691 3006 8.931568 GGATAAAAAGGGGTGTATCTAGAACTA 58.068 37.037 0.00 0.00 0.00 2.24
2692 3007 7.404980 TGGATAAAAAGGGGTGTATCTAGAACT 59.595 37.037 0.00 0.00 0.00 3.01
2693 3008 7.571025 TGGATAAAAAGGGGTGTATCTAGAAC 58.429 38.462 0.00 0.00 0.00 3.01
2694 3009 7.758820 TGGATAAAAAGGGGTGTATCTAGAA 57.241 36.000 0.00 0.00 0.00 2.10
2695 3010 7.947782 ATGGATAAAAAGGGGTGTATCTAGA 57.052 36.000 0.00 0.00 0.00 2.43
2696 3011 8.996651 AAATGGATAAAAAGGGGTGTATCTAG 57.003 34.615 0.00 0.00 0.00 2.43
2697 3012 9.196139 CAAAATGGATAAAAAGGGGTGTATCTA 57.804 33.333 0.00 0.00 0.00 1.98
2698 3013 7.898636 TCAAAATGGATAAAAAGGGGTGTATCT 59.101 33.333 0.00 0.00 0.00 1.98
2699 3014 8.073467 TCAAAATGGATAAAAAGGGGTGTATC 57.927 34.615 0.00 0.00 0.00 2.24
2700 3015 8.485392 CATCAAAATGGATAAAAAGGGGTGTAT 58.515 33.333 0.00 0.00 0.00 2.29
2701 3016 7.676043 TCATCAAAATGGATAAAAAGGGGTGTA 59.324 33.333 0.00 0.00 33.42 2.90
2702 3017 6.500049 TCATCAAAATGGATAAAAAGGGGTGT 59.500 34.615 0.00 0.00 33.42 4.16
2703 3018 6.818142 GTCATCAAAATGGATAAAAAGGGGTG 59.182 38.462 0.00 0.00 33.42 4.61
2704 3019 6.500049 TGTCATCAAAATGGATAAAAAGGGGT 59.500 34.615 0.00 0.00 33.42 4.95
2705 3020 6.945218 TGTCATCAAAATGGATAAAAAGGGG 58.055 36.000 0.00 0.00 33.42 4.79
2706 3021 8.096414 ACTTGTCATCAAAATGGATAAAAAGGG 58.904 33.333 0.00 0.00 33.42 3.95
2707 3022 9.492973 AACTTGTCATCAAAATGGATAAAAAGG 57.507 29.630 0.00 0.00 33.42 3.11
2733 3048 1.273327 GTACTCCCTCCGTCCGAAAAA 59.727 52.381 0.00 0.00 0.00 1.94
2734 3049 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
2735 3050 0.251297 TGTACTCCCTCCGTCCGAAA 60.251 55.000 0.00 0.00 0.00 3.46
2736 3051 0.033796 ATGTACTCCCTCCGTCCGAA 60.034 55.000 0.00 0.00 0.00 4.30
2737 3052 0.465097 GATGTACTCCCTCCGTCCGA 60.465 60.000 0.00 0.00 0.00 4.55
2738 3053 1.453762 GGATGTACTCCCTCCGTCCG 61.454 65.000 0.00 0.00 38.19 4.79
2739 3054 1.453762 CGGATGTACTCCCTCCGTCC 61.454 65.000 14.50 0.00 45.30 4.79
2740 3055 2.031360 CGGATGTACTCCCTCCGTC 58.969 63.158 14.50 0.00 45.30 4.79
2741 3056 4.254721 CGGATGTACTCCCTCCGT 57.745 61.111 14.50 0.00 45.30 4.69
2743 3058 3.157750 AGATACGGATGTACTCCCTCC 57.842 52.381 0.00 0.00 41.49 4.30
2744 3059 5.048852 GTGTTAGATACGGATGTACTCCCTC 60.049 48.000 0.00 0.00 41.49 4.30
2745 3060 4.826183 GTGTTAGATACGGATGTACTCCCT 59.174 45.833 0.00 0.00 41.49 4.20
2746 3061 4.826183 AGTGTTAGATACGGATGTACTCCC 59.174 45.833 0.00 0.00 41.49 4.30
2747 3062 6.933521 TCTAGTGTTAGATACGGATGTACTCC 59.066 42.308 0.00 0.00 34.39 3.85
2748 3063 7.959689 TCTAGTGTTAGATACGGATGTACTC 57.040 40.000 0.00 0.00 32.26 2.59
2794 3109 4.941263 TCCGTCCCAAATTAATTGACTCAG 59.059 41.667 0.39 0.00 41.85 3.35
2881 3196 0.465460 AAGCCAACCAAGTTCGCTGA 60.465 50.000 0.32 0.00 38.88 4.26
2896 3211 7.277981 TGTTGAAGAATAGAAGAACGATAAGCC 59.722 37.037 0.00 0.00 0.00 4.35
3188 3522 3.158676 ACCTCTGTCAGTAGAACTCCAC 58.841 50.000 0.00 0.00 0.00 4.02
3462 3798 5.638133 ACACTAACAACAGGGTAGAGACTA 58.362 41.667 0.00 0.00 27.62 2.59
3466 3802 6.433404 TCTTAGACACTAACAACAGGGTAGAG 59.567 42.308 0.00 0.00 30.37 2.43
3468 3804 6.208994 ACTCTTAGACACTAACAACAGGGTAG 59.791 42.308 0.00 0.00 30.37 3.18
3469 3805 6.073314 ACTCTTAGACACTAACAACAGGGTA 58.927 40.000 0.00 0.00 30.37 3.69
3470 3806 4.900054 ACTCTTAGACACTAACAACAGGGT 59.100 41.667 0.00 0.00 33.89 4.34
3471 3807 5.010719 TGACTCTTAGACACTAACAACAGGG 59.989 44.000 0.00 0.00 0.00 4.45
3472 3808 6.085555 TGACTCTTAGACACTAACAACAGG 57.914 41.667 0.00 0.00 0.00 4.00
3473 3809 7.380065 GTCTTGACTCTTAGACACTAACAACAG 59.620 40.741 0.00 0.00 40.35 3.16
3474 3810 7.068348 AGTCTTGACTCTTAGACACTAACAACA 59.932 37.037 0.00 0.00 42.51 3.33
3475 3811 7.427214 AGTCTTGACTCTTAGACACTAACAAC 58.573 38.462 0.00 0.00 42.51 3.32
3476 3812 7.284716 TGAGTCTTGACTCTTAGACACTAACAA 59.715 37.037 25.21 3.73 42.51 2.83
3477 3813 6.771267 TGAGTCTTGACTCTTAGACACTAACA 59.229 38.462 25.21 4.63 42.51 2.41
3478 3814 7.204496 TGAGTCTTGACTCTTAGACACTAAC 57.796 40.000 25.21 2.41 42.51 2.34
3556 3923 1.674441 CCTAGTGACCTGCAATGCATG 59.326 52.381 8.91 8.92 38.13 4.06
3678 4045 6.874297 ATGCATTAAACATTGACAACATCG 57.126 33.333 0.00 0.00 0.00 3.84
3829 4197 6.500684 TTCAACTCCATTCTTGAAGTATGC 57.499 37.500 6.31 0.00 32.62 3.14
3914 4282 3.826157 ACAAATCATCGTGGTGGTCATTT 59.174 39.130 0.00 0.00 0.00 2.32
3927 4295 4.097437 AGTGATCACATGCCACAAATCATC 59.903 41.667 27.02 0.00 33.53 2.92
3962 4330 3.002791 TGCATCTTCATCAACTTCGTCC 58.997 45.455 0.00 0.00 0.00 4.79
4031 4399 4.349365 ACTTCCTTTTGAACCCTGTGAAA 58.651 39.130 0.00 0.00 0.00 2.69
4106 4474 7.936847 TGGAACTTTCTGATAAGCTCAAGTTTA 59.063 33.333 0.00 0.00 34.23 2.01
4112 4480 5.012046 TCACTGGAACTTTCTGATAAGCTCA 59.988 40.000 0.00 0.00 0.00 4.26
4119 4487 3.817647 GCAAGTCACTGGAACTTTCTGAT 59.182 43.478 0.00 0.00 0.00 2.90
4159 4527 7.194278 CGACGAAATAGAACCTCTAATCTGAA 58.806 38.462 0.00 0.00 31.96 3.02
4174 4542 2.295253 AACTGAGCCCGACGAAATAG 57.705 50.000 0.00 0.00 0.00 1.73
4180 4548 0.999406 CATACAAACTGAGCCCGACG 59.001 55.000 0.00 0.00 0.00 5.12
4181 4549 2.094762 ACATACAAACTGAGCCCGAC 57.905 50.000 0.00 0.00 0.00 4.79
4182 4550 2.851263 AACATACAAACTGAGCCCGA 57.149 45.000 0.00 0.00 0.00 5.14
4307 4675 7.970614 GGATGTTGATAGTTCAGGATTTTTGTC 59.029 37.037 0.00 0.00 32.27 3.18
4313 4681 6.725364 AGTTGGATGTTGATAGTTCAGGATT 58.275 36.000 0.00 0.00 32.27 3.01
4353 4721 0.739813 GGTACACCTTACGGCTGCAG 60.740 60.000 10.11 10.11 0.00 4.41
4515 4883 1.963172 CATGGCTTAGCAGCTCATGA 58.037 50.000 14.07 0.00 46.87 3.07
4548 4916 2.947852 TGTTTCTCGCAGTAGAGCTTC 58.052 47.619 0.00 0.00 38.12 3.86
4629 4997 0.761187 ATGGGTCGGATCATCACTGG 59.239 55.000 0.00 0.00 0.00 4.00
4797 5165 4.400529 TCCTGAGCTGCAAATATACGAA 57.599 40.909 1.02 0.00 0.00 3.85
4830 5198 1.225704 GGGTGCCTTCTCAGGATGG 59.774 63.158 0.00 0.00 44.19 3.51
4831 5199 1.225704 GGGGTGCCTTCTCAGGATG 59.774 63.158 0.00 0.00 44.19 3.51
4832 5200 2.003548 GGGGGTGCCTTCTCAGGAT 61.004 63.158 0.00 0.00 44.19 3.24
4833 5201 2.610859 GGGGGTGCCTTCTCAGGA 60.611 66.667 0.00 0.00 44.19 3.86
4834 5202 2.612115 AGGGGGTGCCTTCTCAGG 60.612 66.667 0.00 0.00 44.28 3.86
4835 5203 2.673523 CAGGGGGTGCCTTCTCAG 59.326 66.667 0.00 0.00 0.00 3.35
4844 5212 4.764771 CCATGGGTGCAGGGGGTG 62.765 72.222 2.85 0.00 0.00 4.61
4848 5216 2.376225 ATATGCCCATGGGTGCAGGG 62.376 60.000 31.58 5.01 45.68 4.45
4849 5217 1.154454 ATATGCCCATGGGTGCAGG 59.846 57.895 31.58 5.81 41.46 4.85
4850 5218 1.812686 GCATATGCCCATGGGTGCAG 61.813 60.000 29.94 19.19 41.46 4.41
4851 5219 1.833492 GCATATGCCCATGGGTGCA 60.833 57.895 29.94 24.00 42.52 4.57
4852 5220 1.833492 TGCATATGCCCATGGGTGC 60.833 57.895 31.58 30.01 41.18 5.01
4853 5221 1.466025 GGTGCATATGCCCATGGGTG 61.466 60.000 31.58 22.09 41.18 4.61
4854 5222 1.152483 GGTGCATATGCCCATGGGT 60.152 57.895 31.58 15.92 41.18 4.51
4855 5223 1.909781 GGGTGCATATGCCCATGGG 60.910 63.158 27.87 27.87 44.23 4.00
4856 5224 3.781760 GGGTGCATATGCCCATGG 58.218 61.111 26.58 4.14 44.23 3.66
4860 5228 2.170187 TGAAAATTGGGTGCATATGCCC 59.830 45.455 24.54 22.41 45.04 5.36
4861 5229 3.540314 TGAAAATTGGGTGCATATGCC 57.460 42.857 24.54 15.25 41.18 4.40
4862 5230 5.876612 TTTTGAAAATTGGGTGCATATGC 57.123 34.783 21.09 21.09 42.50 3.14
4927 5295 8.065473 TGTGAACATGTATGCCTGATATTTTT 57.935 30.769 0.00 0.00 0.00 1.94
4928 5296 7.643569 TGTGAACATGTATGCCTGATATTTT 57.356 32.000 0.00 0.00 0.00 1.82
4929 5297 7.643569 TTGTGAACATGTATGCCTGATATTT 57.356 32.000 0.00 0.00 0.00 1.40
4930 5298 7.643569 TTTGTGAACATGTATGCCTGATATT 57.356 32.000 0.00 0.00 0.00 1.28
4931 5299 7.286087 ACATTTGTGAACATGTATGCCTGATAT 59.714 33.333 0.00 0.00 31.60 1.63
4932 5300 6.602803 ACATTTGTGAACATGTATGCCTGATA 59.397 34.615 0.00 0.00 31.60 2.15
4933 5301 5.419788 ACATTTGTGAACATGTATGCCTGAT 59.580 36.000 0.00 0.00 31.60 2.90
4934 5302 4.766373 ACATTTGTGAACATGTATGCCTGA 59.234 37.500 0.00 0.00 31.60 3.86
4935 5303 5.063180 ACATTTGTGAACATGTATGCCTG 57.937 39.130 0.00 0.00 31.60 4.85
4950 5318 1.068610 GTGCCGCATACACACATTTGT 60.069 47.619 0.00 0.00 37.96 2.83
4951 5319 1.068679 TGTGCCGCATACACACATTTG 60.069 47.619 0.00 0.00 42.88 2.32
4952 5320 1.242989 TGTGCCGCATACACACATTT 58.757 45.000 0.00 0.00 42.88 2.32
4953 5321 2.939781 TGTGCCGCATACACACATT 58.060 47.368 0.00 0.00 42.88 2.71
4954 5322 4.711892 TGTGCCGCATACACACAT 57.288 50.000 0.00 0.00 42.88 3.21
4957 5325 1.313772 AACTTTGTGCCGCATACACA 58.686 45.000 0.00 0.00 45.90 3.72
4958 5326 2.415697 AAACTTTGTGCCGCATACAC 57.584 45.000 0.00 0.00 38.55 2.90
4959 5327 2.736978 CAAAACTTTGTGCCGCATACA 58.263 42.857 0.00 0.00 33.59 2.29
4970 5338 9.786105 AAAAGGATATTTTTGCACAAAACTTTG 57.214 25.926 15.93 0.60 39.70 2.77
4971 5339 9.786105 CAAAAGGATATTTTTGCACAAAACTTT 57.214 25.926 8.01 10.54 40.09 2.66
4972 5340 8.955388 ACAAAAGGATATTTTTGCACAAAACTT 58.045 25.926 8.01 5.66 46.78 2.66
4973 5341 8.504812 ACAAAAGGATATTTTTGCACAAAACT 57.495 26.923 8.01 6.07 46.78 2.66
4974 5342 9.566530 AAACAAAAGGATATTTTTGCACAAAAC 57.433 25.926 8.01 0.00 46.78 2.43
4976 5344 9.565213 CAAAACAAAAGGATATTTTTGCACAAA 57.435 25.926 11.02 0.00 46.78 2.83
4977 5345 8.734386 ACAAAACAAAAGGATATTTTTGCACAA 58.266 25.926 11.02 0.00 46.78 3.33
4978 5346 8.273780 ACAAAACAAAAGGATATTTTTGCACA 57.726 26.923 11.02 0.00 46.78 4.57
4979 5347 8.611757 AGACAAAACAAAAGGATATTTTTGCAC 58.388 29.630 11.02 5.11 46.78 4.57
4980 5348 8.729805 AGACAAAACAAAAGGATATTTTTGCA 57.270 26.923 11.02 0.00 46.78 4.08
4981 5349 8.282592 GGAGACAAAACAAAAGGATATTTTTGC 58.717 33.333 11.02 3.96 46.78 3.68
4983 5351 8.201464 ACGGAGACAAAACAAAAGGATATTTTT 58.799 29.630 0.00 0.00 0.00 1.94
4984 5352 7.722363 ACGGAGACAAAACAAAAGGATATTTT 58.278 30.769 0.00 0.00 0.00 1.82
4985 5353 7.284919 ACGGAGACAAAACAAAAGGATATTT 57.715 32.000 0.00 0.00 0.00 1.40
4986 5354 6.894339 ACGGAGACAAAACAAAAGGATATT 57.106 33.333 0.00 0.00 0.00 1.28
4987 5355 7.989416 TTACGGAGACAAAACAAAAGGATAT 57.011 32.000 0.00 0.00 0.00 1.63
4988 5356 7.804843 TTTACGGAGACAAAACAAAAGGATA 57.195 32.000 0.00 0.00 0.00 2.59
4989 5357 6.702716 TTTACGGAGACAAAACAAAAGGAT 57.297 33.333 0.00 0.00 0.00 3.24
4990 5358 6.512342 TTTTACGGAGACAAAACAAAAGGA 57.488 33.333 0.00 0.00 0.00 3.36
5011 5379 9.651913 TTTAGAAGCACTGAAATTTGTCTTTTT 57.348 25.926 0.00 0.00 0.00 1.94
5012 5380 9.822185 ATTTAGAAGCACTGAAATTTGTCTTTT 57.178 25.926 0.00 0.00 0.00 2.27
5015 5383 9.289782 ACTATTTAGAAGCACTGAAATTTGTCT 57.710 29.630 0.00 0.00 0.00 3.41
5016 5384 9.334693 CACTATTTAGAAGCACTGAAATTTGTC 57.665 33.333 0.00 0.00 0.00 3.18
5017 5385 8.850156 ACACTATTTAGAAGCACTGAAATTTGT 58.150 29.630 0.00 0.00 0.00 2.83
5018 5386 9.683069 AACACTATTTAGAAGCACTGAAATTTG 57.317 29.630 0.00 0.00 0.00 2.32
5020 5388 9.899226 GAAACACTATTTAGAAGCACTGAAATT 57.101 29.630 0.00 0.00 0.00 1.82
5021 5389 9.066892 TGAAACACTATTTAGAAGCACTGAAAT 57.933 29.630 0.00 0.00 0.00 2.17
5022 5390 8.342634 GTGAAACACTATTTAGAAGCACTGAAA 58.657 33.333 0.00 0.00 36.32 2.69
5023 5391 7.041372 GGTGAAACACTATTTAGAAGCACTGAA 60.041 37.037 0.00 0.00 39.98 3.02
5024 5392 6.426937 GGTGAAACACTATTTAGAAGCACTGA 59.573 38.462 0.00 0.00 39.98 3.41
5025 5393 6.348540 GGGTGAAACACTATTTAGAAGCACTG 60.349 42.308 0.00 0.00 37.19 3.66
5026 5394 5.705905 GGGTGAAACACTATTTAGAAGCACT 59.294 40.000 0.00 0.00 37.19 4.40
5027 5395 5.472137 TGGGTGAAACACTATTTAGAAGCAC 59.528 40.000 0.00 0.00 44.23 4.40
5028 5396 5.626142 TGGGTGAAACACTATTTAGAAGCA 58.374 37.500 0.00 0.00 44.23 3.91
5029 5397 6.759497 ATGGGTGAAACACTATTTAGAAGC 57.241 37.500 0.00 0.00 44.23 3.86
5036 5404 9.705290 GACAAAAATTATGGGTGAAACACTATT 57.295 29.630 0.00 0.00 44.23 1.73
5037 5405 9.088987 AGACAAAAATTATGGGTGAAACACTAT 57.911 29.630 0.00 0.00 44.23 2.12
5038 5406 8.472007 AGACAAAAATTATGGGTGAAACACTA 57.528 30.769 0.00 0.00 44.23 2.74
5039 5407 7.360113 AGACAAAAATTATGGGTGAAACACT 57.640 32.000 0.00 0.00 44.23 3.55
5040 5408 8.432110 AAAGACAAAAATTATGGGTGAAACAC 57.568 30.769 0.00 0.00 44.11 3.32
5041 5409 9.454859 AAAAAGACAAAAATTATGGGTGAAACA 57.545 25.926 0.00 0.00 39.98 2.83
5064 5432 3.325293 TTTCTGTGGCTTGTGCAAAAA 57.675 38.095 0.00 0.00 41.91 1.94
5065 5433 3.325293 TTTTCTGTGGCTTGTGCAAAA 57.675 38.095 0.00 0.00 41.91 2.44
5066 5434 3.325293 TTTTTCTGTGGCTTGTGCAAA 57.675 38.095 0.00 0.00 41.91 3.68
5067 5435 3.132646 AGATTTTTCTGTGGCTTGTGCAA 59.867 39.130 0.00 0.00 41.91 4.08
5068 5436 2.694628 AGATTTTTCTGTGGCTTGTGCA 59.305 40.909 0.00 0.00 41.91 4.57
5069 5437 3.375782 AGATTTTTCTGTGGCTTGTGC 57.624 42.857 0.00 0.00 38.76 4.57
5070 5438 7.951530 AAAATAGATTTTTCTGTGGCTTGTG 57.048 32.000 0.00 0.00 36.65 3.33
5098 5466 2.993545 TGTGCGTGCATAAAGTTTCAC 58.006 42.857 0.00 0.00 0.00 3.18
5099 5467 3.666638 CGATGTGCGTGCATAAAGTTTCA 60.667 43.478 0.00 0.00 34.64 2.69
5100 5468 2.840176 CGATGTGCGTGCATAAAGTTTC 59.160 45.455 0.00 0.00 34.64 2.78
5101 5469 2.482336 TCGATGTGCGTGCATAAAGTTT 59.518 40.909 0.00 0.00 41.80 2.66
5102 5470 2.073056 TCGATGTGCGTGCATAAAGTT 58.927 42.857 0.00 0.00 41.80 2.66
5103 5471 1.720805 TCGATGTGCGTGCATAAAGT 58.279 45.000 0.00 0.00 41.80 2.66
5104 5472 2.804421 TTCGATGTGCGTGCATAAAG 57.196 45.000 0.00 0.00 41.80 1.85
5105 5473 4.319405 CCATATTCGATGTGCGTGCATAAA 60.319 41.667 0.00 0.00 41.80 1.40
5106 5474 3.186205 CCATATTCGATGTGCGTGCATAA 59.814 43.478 0.00 0.00 41.80 1.90
5107 5475 2.736192 CCATATTCGATGTGCGTGCATA 59.264 45.455 0.00 0.00 41.80 3.14
5108 5476 1.532437 CCATATTCGATGTGCGTGCAT 59.468 47.619 0.00 0.00 41.80 3.96
5109 5477 0.936600 CCATATTCGATGTGCGTGCA 59.063 50.000 0.00 0.00 41.80 4.57
5110 5478 1.070577 GTCCATATTCGATGTGCGTGC 60.071 52.381 0.00 0.00 41.80 5.34
5111 5479 2.033747 GTGTCCATATTCGATGTGCGTG 60.034 50.000 0.00 0.00 41.80 5.34
5112 5480 2.201732 GTGTCCATATTCGATGTGCGT 58.798 47.619 0.00 0.00 41.80 5.24
5113 5481 1.190103 CGTGTCCATATTCGATGTGCG 59.810 52.381 0.00 0.00 42.69 5.34
5114 5482 2.201732 ACGTGTCCATATTCGATGTGC 58.798 47.619 0.00 0.00 0.00 4.57
5115 5483 3.734231 GGTACGTGTCCATATTCGATGTG 59.266 47.826 0.00 0.00 0.00 3.21
5116 5484 3.635373 AGGTACGTGTCCATATTCGATGT 59.365 43.478 12.78 0.00 0.00 3.06
5117 5485 3.981416 CAGGTACGTGTCCATATTCGATG 59.019 47.826 7.41 0.00 0.00 3.84
5118 5486 3.635373 ACAGGTACGTGTCCATATTCGAT 59.365 43.478 15.24 0.00 0.00 3.59
5119 5487 3.018856 ACAGGTACGTGTCCATATTCGA 58.981 45.455 15.24 0.00 0.00 3.71
5120 5488 3.113322 CACAGGTACGTGTCCATATTCG 58.887 50.000 17.92 1.52 32.00 3.34
5121 5489 2.864343 GCACAGGTACGTGTCCATATTC 59.136 50.000 17.92 0.00 39.19 1.75
5122 5490 2.235155 TGCACAGGTACGTGTCCATATT 59.765 45.455 17.92 0.00 39.19 1.28
5123 5491 1.828595 TGCACAGGTACGTGTCCATAT 59.171 47.619 17.92 0.00 39.19 1.78
5124 5492 1.258676 TGCACAGGTACGTGTCCATA 58.741 50.000 17.92 2.95 39.19 2.74
5125 5493 0.394938 TTGCACAGGTACGTGTCCAT 59.605 50.000 17.92 0.00 39.19 3.41
5126 5494 0.531090 GTTGCACAGGTACGTGTCCA 60.531 55.000 17.92 13.12 39.19 4.02
5127 5495 0.531090 TGTTGCACAGGTACGTGTCC 60.531 55.000 17.92 10.43 39.19 4.02
5128 5496 1.508632 ATGTTGCACAGGTACGTGTC 58.491 50.000 17.92 13.04 39.19 3.67
5129 5497 1.961793 AATGTTGCACAGGTACGTGT 58.038 45.000 15.24 15.24 39.19 4.49
5130 5498 3.347958 AAAATGTTGCACAGGTACGTG 57.652 42.857 13.84 13.84 40.00 4.49
5164 5532 9.919348 CACTTTGGAAAAACACATTTCTAAATG 57.081 29.630 12.71 12.71 43.87 2.32
5165 5533 9.108284 CCACTTTGGAAAAACACATTTCTAAAT 57.892 29.630 10.37 1.99 43.87 1.40
5166 5534 7.550906 CCCACTTTGGAAAAACACATTTCTAAA 59.449 33.333 9.78 9.78 43.21 1.85
5167 5535 7.044798 CCCACTTTGGAAAAACACATTTCTAA 58.955 34.615 0.00 0.00 40.96 2.10
5168 5536 6.155393 ACCCACTTTGGAAAAACACATTTCTA 59.845 34.615 0.00 0.00 40.96 2.10
5169 5537 5.045942 ACCCACTTTGGAAAAACACATTTCT 60.046 36.000 0.00 0.00 40.96 2.52
5170 5538 5.182487 ACCCACTTTGGAAAAACACATTTC 58.818 37.500 0.00 0.00 40.96 2.17
5171 5539 5.172687 ACCCACTTTGGAAAAACACATTT 57.827 34.783 0.00 0.00 40.96 2.32
5172 5540 4.835284 ACCCACTTTGGAAAAACACATT 57.165 36.364 0.00 0.00 40.96 2.71
5173 5541 4.223923 TGAACCCACTTTGGAAAAACACAT 59.776 37.500 0.00 0.00 40.96 3.21
5174 5542 3.578716 TGAACCCACTTTGGAAAAACACA 59.421 39.130 0.00 0.00 40.96 3.72
5175 5543 4.195225 TGAACCCACTTTGGAAAAACAC 57.805 40.909 0.00 0.00 40.96 3.32
5176 5544 6.098982 ACATATGAACCCACTTTGGAAAAACA 59.901 34.615 10.38 0.00 40.96 2.83
5177 5545 6.521162 ACATATGAACCCACTTTGGAAAAAC 58.479 36.000 10.38 0.00 40.96 2.43
5178 5546 6.739331 ACATATGAACCCACTTTGGAAAAA 57.261 33.333 10.38 0.00 40.96 1.94
5179 5547 6.209788 GGTACATATGAACCCACTTTGGAAAA 59.790 38.462 10.38 0.00 40.96 2.29
5180 5548 5.712917 GGTACATATGAACCCACTTTGGAAA 59.287 40.000 10.38 0.00 40.96 3.13
5181 5549 5.258051 GGTACATATGAACCCACTTTGGAA 58.742 41.667 10.38 0.00 40.96 3.53
5182 5550 4.850680 GGTACATATGAACCCACTTTGGA 58.149 43.478 10.38 0.00 40.96 3.53
5191 5559 5.940470 GGATGAATCAGGGTACATATGAACC 59.060 44.000 10.38 8.23 34.85 3.62
5192 5560 6.533730 TGGATGAATCAGGGTACATATGAAC 58.466 40.000 10.38 0.00 0.00 3.18
5193 5561 6.762077 TGGATGAATCAGGGTACATATGAA 57.238 37.500 10.38 0.00 0.00 2.57
5194 5562 6.714278 CATGGATGAATCAGGGTACATATGA 58.286 40.000 10.38 0.00 0.00 2.15
5195 5563 5.356190 GCATGGATGAATCAGGGTACATATG 59.644 44.000 0.00 0.00 0.00 1.78
5196 5564 5.014438 TGCATGGATGAATCAGGGTACATAT 59.986 40.000 0.00 0.00 0.00 1.78
5197 5565 4.350520 TGCATGGATGAATCAGGGTACATA 59.649 41.667 0.00 0.00 0.00 2.29
5198 5566 3.138839 TGCATGGATGAATCAGGGTACAT 59.861 43.478 0.00 0.00 0.00 2.29
5199 5567 2.509131 TGCATGGATGAATCAGGGTACA 59.491 45.455 0.00 0.00 0.00 2.90
5200 5568 2.880890 GTGCATGGATGAATCAGGGTAC 59.119 50.000 0.00 0.00 0.00 3.34
5201 5569 2.779430 AGTGCATGGATGAATCAGGGTA 59.221 45.455 0.00 0.00 0.00 3.69
5202 5570 1.567649 AGTGCATGGATGAATCAGGGT 59.432 47.619 0.00 0.00 0.00 4.34
5203 5571 2.359981 AGTGCATGGATGAATCAGGG 57.640 50.000 0.00 0.00 0.00 4.45
5204 5572 2.621998 GGAAGTGCATGGATGAATCAGG 59.378 50.000 0.00 0.00 0.00 3.86
5205 5573 2.621998 GGGAAGTGCATGGATGAATCAG 59.378 50.000 0.00 0.00 0.00 2.90
5206 5574 2.025131 TGGGAAGTGCATGGATGAATCA 60.025 45.455 0.00 0.00 0.00 2.57
5207 5575 2.621998 CTGGGAAGTGCATGGATGAATC 59.378 50.000 0.00 0.00 0.00 2.52
5208 5576 2.662866 CTGGGAAGTGCATGGATGAAT 58.337 47.619 0.00 0.00 0.00 2.57
5209 5577 1.956636 GCTGGGAAGTGCATGGATGAA 60.957 52.381 0.00 0.00 0.00 2.57
5210 5578 0.394762 GCTGGGAAGTGCATGGATGA 60.395 55.000 0.00 0.00 0.00 2.92
5211 5579 1.389609 GGCTGGGAAGTGCATGGATG 61.390 60.000 0.00 0.00 0.00 3.51
5212 5580 1.076485 GGCTGGGAAGTGCATGGAT 60.076 57.895 0.00 0.00 0.00 3.41
5213 5581 1.866483 ATGGCTGGGAAGTGCATGGA 61.866 55.000 0.00 0.00 0.00 3.41
5214 5582 1.380785 ATGGCTGGGAAGTGCATGG 60.381 57.895 0.00 0.00 0.00 3.66
5215 5583 1.389609 GGATGGCTGGGAAGTGCATG 61.390 60.000 0.00 0.00 0.00 4.06
5216 5584 1.076485 GGATGGCTGGGAAGTGCAT 60.076 57.895 0.00 0.00 0.00 3.96
5217 5585 0.913934 TAGGATGGCTGGGAAGTGCA 60.914 55.000 0.00 0.00 0.00 4.57
5218 5586 0.179034 CTAGGATGGCTGGGAAGTGC 60.179 60.000 0.00 0.00 0.00 4.40
5219 5587 1.139853 GACTAGGATGGCTGGGAAGTG 59.860 57.143 0.00 0.00 0.00 3.16
5220 5588 1.008938 AGACTAGGATGGCTGGGAAGT 59.991 52.381 0.00 0.00 0.00 3.01
5221 5589 1.799933 AGACTAGGATGGCTGGGAAG 58.200 55.000 0.00 0.00 0.00 3.46
5222 5590 2.247635 ACTAGACTAGGATGGCTGGGAA 59.752 50.000 14.03 0.00 0.00 3.97
5223 5591 1.860240 ACTAGACTAGGATGGCTGGGA 59.140 52.381 14.03 0.00 0.00 4.37
5224 5592 2.158385 AGACTAGACTAGGATGGCTGGG 60.158 54.545 14.03 0.00 0.00 4.45
5225 5593 2.890311 CAGACTAGACTAGGATGGCTGG 59.110 54.545 14.03 0.00 0.00 4.85
5266 5634 2.125552 CCTGCGAGCGAACATCCA 60.126 61.111 0.00 0.00 0.00 3.41
5267 5635 2.892425 CCCTGCGAGCGAACATCC 60.892 66.667 0.00 0.00 0.00 3.51
5268 5636 2.892425 CCCCTGCGAGCGAACATC 60.892 66.667 0.00 0.00 0.00 3.06
5279 5647 4.982701 ACAACAGCCTGCCCCTGC 62.983 66.667 0.00 0.00 33.65 4.85
5280 5648 2.987547 CACAACAGCCTGCCCCTG 60.988 66.667 0.00 0.00 36.41 4.45
5281 5649 4.290622 CCACAACAGCCTGCCCCT 62.291 66.667 0.00 0.00 0.00 4.79
5282 5650 4.603535 ACCACAACAGCCTGCCCC 62.604 66.667 0.00 0.00 0.00 5.80
5283 5651 2.985847 GACCACAACAGCCTGCCC 60.986 66.667 0.00 0.00 0.00 5.36
5284 5652 1.391157 TTTGACCACAACAGCCTGCC 61.391 55.000 0.00 0.00 35.63 4.85
5285 5653 0.031178 CTTTGACCACAACAGCCTGC 59.969 55.000 0.00 0.00 35.63 4.85
5286 5654 0.031178 GCTTTGACCACAACAGCCTG 59.969 55.000 0.00 0.00 35.86 4.85
5287 5655 1.447317 CGCTTTGACCACAACAGCCT 61.447 55.000 0.00 0.00 37.12 4.58
5288 5656 1.008538 CGCTTTGACCACAACAGCC 60.009 57.895 0.00 0.00 37.12 4.85
5289 5657 1.658409 GCGCTTTGACCACAACAGC 60.658 57.895 0.00 0.00 37.10 4.40
5290 5658 1.008538 GGCGCTTTGACCACAACAG 60.009 57.895 7.64 0.00 35.63 3.16
5291 5659 3.115556 GGCGCTTTGACCACAACA 58.884 55.556 7.64 0.00 35.63 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.