Multiple sequence alignment - TraesCS5D01G134100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G134100 chr5D 100.000 2858 0 0 1 2858 214173446 214176303 0.000000e+00 5278
1 TraesCS5D01G134100 chr5D 100.000 626 0 0 2233 2858 179926002 179925377 0.000000e+00 1157
2 TraesCS5D01G134100 chr5D 100.000 626 0 0 2233 2858 293151192 293150567 0.000000e+00 1157
3 TraesCS5D01G134100 chr5D 100.000 626 0 0 2233 2858 342162352 342161727 0.000000e+00 1157
4 TraesCS5D01G134100 chr5B 94.725 1839 44 25 415 2222 228817826 228819642 0.000000e+00 2809
5 TraesCS5D01G134100 chr5B 79.372 223 34 9 5 224 707382445 707382232 2.290000e-31 147
6 TraesCS5D01G134100 chr5A 95.546 1684 50 12 541 2210 279744340 279746012 0.000000e+00 2671
7 TraesCS5D01G134100 chr6D 100.000 626 0 0 2233 2858 433656347 433656972 0.000000e+00 1157
8 TraesCS5D01G134100 chr6D 99.521 626 3 0 2233 2858 98997 99622 0.000000e+00 1140
9 TraesCS5D01G134100 chr6D 85.156 256 30 8 228 479 78252610 78252359 3.650000e-64 255
10 TraesCS5D01G134100 chr1D 100.000 626 0 0 2233 2858 204291781 204292406 0.000000e+00 1157
11 TraesCS5D01G134100 chr1D 86.008 243 30 4 228 467 431763950 431764191 1.020000e-64 257
12 TraesCS5D01G134100 chr1D 77.178 482 75 27 3 481 435361321 435361770 6.110000e-62 248
13 TraesCS5D01G134100 chrUn 99.840 626 1 0 2233 2858 90086816 90087441 0.000000e+00 1151
14 TraesCS5D01G134100 chrUn 99.521 626 3 0 2233 2858 366839171 366839796 0.000000e+00 1140
15 TraesCS5D01G134100 chr3D 99.043 627 5 1 2233 2858 592538786 592539412 0.000000e+00 1123
16 TraesCS5D01G134100 chr3D 84.821 224 32 2 3 224 533689787 533689564 1.030000e-54 224
17 TraesCS5D01G134100 chr3D 78.125 224 46 3 3 224 461428111 461427889 3.840000e-29 139
18 TraesCS5D01G134100 chr3D 77.391 230 43 6 3 223 447616864 447617093 8.310000e-26 128
19 TraesCS5D01G134100 chr3B 78.891 469 66 22 2 467 740037769 740038207 1.300000e-73 287
20 TraesCS5D01G134100 chr3B 79.372 223 44 2 3 224 727466992 727466771 3.810000e-34 156
21 TraesCS5D01G134100 chr2D 85.156 256 32 6 228 480 632084181 632083929 1.020000e-64 257
22 TraesCS5D01G134100 chr7B 84.674 261 34 6 228 485 100359079 100359336 3.650000e-64 255
23 TraesCS5D01G134100 chr7D 85.039 254 32 6 228 478 523391966 523391716 1.310000e-63 254
24 TraesCS5D01G134100 chr4D 84.496 258 36 4 228 482 504283535 504283279 4.730000e-63 252
25 TraesCS5D01G134100 chr4D 76.991 226 48 3 3 224 398287615 398287840 2.990000e-25 126
26 TraesCS5D01G134100 chr4D 89.247 93 10 0 1158 1250 96046406 96046314 1.800000e-22 117
27 TraesCS5D01G134100 chr4D 89.888 89 8 1 1421 1508 96046238 96046150 2.330000e-21 113
28 TraesCS5D01G134100 chr2B 84.706 255 35 4 229 480 109316662 109316915 4.730000e-63 252
29 TraesCS5D01G134100 chr1B 84.825 257 32 7 228 480 587499191 587499444 4.730000e-63 252
30 TraesCS5D01G134100 chr6B 84.556 259 33 7 223 478 113678638 113678892 1.700000e-62 250
31 TraesCS5D01G134100 chr6A 79.464 224 41 4 3 224 453860390 453860610 1.370000e-33 154
32 TraesCS5D01G134100 chr4A 90.000 90 9 0 1158 1247 483174828 483174917 1.800000e-22 117
33 TraesCS5D01G134100 chr4A 90.000 90 8 1 1420 1508 483175101 483175190 6.470000e-22 115
34 TraesCS5D01G134100 chr4B 88.889 90 9 1 1420 1508 136060097 136060008 3.010000e-20 110


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G134100 chr5D 214173446 214176303 2857 False 5278 5278 100.000 1 2858 1 chr5D.!!$F1 2857
1 TraesCS5D01G134100 chr5D 179925377 179926002 625 True 1157 1157 100.000 2233 2858 1 chr5D.!!$R1 625
2 TraesCS5D01G134100 chr5D 293150567 293151192 625 True 1157 1157 100.000 2233 2858 1 chr5D.!!$R2 625
3 TraesCS5D01G134100 chr5D 342161727 342162352 625 True 1157 1157 100.000 2233 2858 1 chr5D.!!$R3 625
4 TraesCS5D01G134100 chr5B 228817826 228819642 1816 False 2809 2809 94.725 415 2222 1 chr5B.!!$F1 1807
5 TraesCS5D01G134100 chr5A 279744340 279746012 1672 False 2671 2671 95.546 541 2210 1 chr5A.!!$F1 1669
6 TraesCS5D01G134100 chr6D 433656347 433656972 625 False 1157 1157 100.000 2233 2858 1 chr6D.!!$F2 625
7 TraesCS5D01G134100 chr6D 98997 99622 625 False 1140 1140 99.521 2233 2858 1 chr6D.!!$F1 625
8 TraesCS5D01G134100 chr1D 204291781 204292406 625 False 1157 1157 100.000 2233 2858 1 chr1D.!!$F1 625
9 TraesCS5D01G134100 chrUn 90086816 90087441 625 False 1151 1151 99.840 2233 2858 1 chrUn.!!$F1 625
10 TraesCS5D01G134100 chrUn 366839171 366839796 625 False 1140 1140 99.521 2233 2858 1 chrUn.!!$F2 625
11 TraesCS5D01G134100 chr3D 592538786 592539412 626 False 1123 1123 99.043 2233 2858 1 chr3D.!!$F2 625

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
86 87 0.036388 ATCGGTGGACGTGCAAAGAT 60.036 50.0 12.69 16.24 44.69 2.40 F
228 229 0.038251 TCTGCTGTGCTGGTCTAACG 60.038 55.0 0.00 0.00 0.00 3.18 F
311 312 0.179468 TATAACCAGTCTTGCCCGGC 59.821 55.0 1.04 1.04 0.00 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1323 1339 0.456312 GAGTTACCTCGGTGAGCGTG 60.456 60.0 3.30 0.75 0.00 5.34 R
1809 1835 1.312815 GTGCCTGTTCTTTCAGCTGT 58.687 50.0 14.67 0.00 34.47 4.40 R
2229 2274 0.463620 GCAACAAGAAGGGCCACAAA 59.536 50.0 6.18 0.00 0.00 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.901413 ATGGCTCTCTGAAGATGGAATAA 57.099 39.130 0.00 0.00 0.00 1.40
23 24 5.287674 TGGCTCTCTGAAGATGGAATAAG 57.712 43.478 0.00 0.00 0.00 1.73
24 25 4.102210 TGGCTCTCTGAAGATGGAATAAGG 59.898 45.833 0.00 0.00 0.00 2.69
25 26 4.102367 GGCTCTCTGAAGATGGAATAAGGT 59.898 45.833 0.00 0.00 0.00 3.50
26 27 5.397334 GGCTCTCTGAAGATGGAATAAGGTT 60.397 44.000 0.00 0.00 0.00 3.50
27 28 5.757808 GCTCTCTGAAGATGGAATAAGGTTC 59.242 44.000 0.00 0.00 0.00 3.62
28 29 6.407979 GCTCTCTGAAGATGGAATAAGGTTCT 60.408 42.308 0.00 0.00 0.00 3.01
29 30 7.118496 TCTCTGAAGATGGAATAAGGTTCTC 57.882 40.000 0.00 0.00 0.00 2.87
30 31 6.098982 TCTCTGAAGATGGAATAAGGTTCTCC 59.901 42.308 0.00 0.00 0.00 3.71
31 32 5.726308 TCTGAAGATGGAATAAGGTTCTCCA 59.274 40.000 0.00 0.00 43.26 3.86
32 33 5.745227 TGAAGATGGAATAAGGTTCTCCAC 58.255 41.667 0.00 0.00 41.95 4.02
33 34 4.408182 AGATGGAATAAGGTTCTCCACG 57.592 45.455 0.00 0.00 41.95 4.94
34 35 2.396590 TGGAATAAGGTTCTCCACGC 57.603 50.000 0.00 0.00 34.26 5.34
35 36 1.065709 TGGAATAAGGTTCTCCACGCC 60.066 52.381 0.00 0.00 34.26 5.68
36 37 1.209747 GGAATAAGGTTCTCCACGCCT 59.790 52.381 0.00 0.00 35.89 5.52
37 38 2.433239 GGAATAAGGTTCTCCACGCCTA 59.567 50.000 0.00 0.00 35.89 3.93
38 39 3.118519 GGAATAAGGTTCTCCACGCCTAA 60.119 47.826 0.00 0.00 35.89 2.69
39 40 3.538634 ATAAGGTTCTCCACGCCTAAC 57.461 47.619 0.00 0.00 35.89 2.34
40 41 0.323957 AAGGTTCTCCACGCCTAACC 59.676 55.000 0.00 0.00 41.41 2.85
41 42 1.078637 GGTTCTCCACGCCTAACCC 60.079 63.158 0.00 0.00 36.24 4.11
42 43 1.675219 GTTCTCCACGCCTAACCCA 59.325 57.895 0.00 0.00 0.00 4.51
43 44 0.672711 GTTCTCCACGCCTAACCCAC 60.673 60.000 0.00 0.00 0.00 4.61
44 45 0.834687 TTCTCCACGCCTAACCCACT 60.835 55.000 0.00 0.00 0.00 4.00
45 46 0.834687 TCTCCACGCCTAACCCACTT 60.835 55.000 0.00 0.00 0.00 3.16
46 47 0.391263 CTCCACGCCTAACCCACTTC 60.391 60.000 0.00 0.00 0.00 3.01
47 48 0.834687 TCCACGCCTAACCCACTTCT 60.835 55.000 0.00 0.00 0.00 2.85
48 49 0.391263 CCACGCCTAACCCACTTCTC 60.391 60.000 0.00 0.00 0.00 2.87
49 50 0.736325 CACGCCTAACCCACTTCTCG 60.736 60.000 0.00 0.00 0.00 4.04
50 51 0.896940 ACGCCTAACCCACTTCTCGA 60.897 55.000 0.00 0.00 0.00 4.04
51 52 0.460311 CGCCTAACCCACTTCTCGAT 59.540 55.000 0.00 0.00 0.00 3.59
52 53 1.802880 CGCCTAACCCACTTCTCGATG 60.803 57.143 0.00 0.00 0.00 3.84
53 54 1.473434 GCCTAACCCACTTCTCGATGG 60.473 57.143 0.00 0.00 35.59 3.51
54 55 1.831736 CCTAACCCACTTCTCGATGGT 59.168 52.381 2.27 0.00 33.80 3.55
55 56 2.418746 CCTAACCCACTTCTCGATGGTG 60.419 54.545 2.27 4.25 33.80 4.17
56 57 1.056660 AACCCACTTCTCGATGGTGT 58.943 50.000 2.27 0.00 33.80 4.16
57 58 0.321671 ACCCACTTCTCGATGGTGTG 59.678 55.000 2.27 2.33 33.80 3.82
58 59 0.321671 CCCACTTCTCGATGGTGTGT 59.678 55.000 2.27 0.00 33.80 3.72
59 60 1.673033 CCCACTTCTCGATGGTGTGTC 60.673 57.143 2.27 0.00 33.80 3.67
60 61 1.273606 CCACTTCTCGATGGTGTGTCT 59.726 52.381 10.23 0.00 0.00 3.41
61 62 2.492088 CCACTTCTCGATGGTGTGTCTA 59.508 50.000 10.23 0.00 0.00 2.59
62 63 3.428180 CCACTTCTCGATGGTGTGTCTAG 60.428 52.174 10.23 0.00 0.00 2.43
63 64 2.164624 ACTTCTCGATGGTGTGTCTAGC 59.835 50.000 0.00 0.00 0.00 3.42
64 65 1.834188 TCTCGATGGTGTGTCTAGCA 58.166 50.000 0.00 0.00 0.00 3.49
65 66 2.379005 TCTCGATGGTGTGTCTAGCAT 58.621 47.619 0.00 0.00 41.12 3.79
66 67 2.760650 TCTCGATGGTGTGTCTAGCATT 59.239 45.455 0.00 0.00 38.76 3.56
67 68 3.951680 TCTCGATGGTGTGTCTAGCATTA 59.048 43.478 0.00 0.00 38.76 1.90
68 69 4.584743 TCTCGATGGTGTGTCTAGCATTAT 59.415 41.667 0.00 0.00 38.76 1.28
69 70 4.871513 TCGATGGTGTGTCTAGCATTATC 58.128 43.478 0.00 0.00 38.76 1.75
70 71 3.670523 CGATGGTGTGTCTAGCATTATCG 59.329 47.826 0.00 0.00 38.76 2.92
71 72 3.452755 TGGTGTGTCTAGCATTATCGG 57.547 47.619 0.00 0.00 0.00 4.18
72 73 2.764010 TGGTGTGTCTAGCATTATCGGT 59.236 45.455 0.00 0.00 0.00 4.69
73 74 3.123804 GGTGTGTCTAGCATTATCGGTG 58.876 50.000 0.00 0.00 0.00 4.94
74 75 3.123804 GTGTGTCTAGCATTATCGGTGG 58.876 50.000 0.00 0.00 0.00 4.61
75 76 3.028130 TGTGTCTAGCATTATCGGTGGA 58.972 45.455 0.00 0.00 0.00 4.02
76 77 3.181479 TGTGTCTAGCATTATCGGTGGAC 60.181 47.826 0.00 0.00 43.00 4.02
77 78 2.034179 TGTCTAGCATTATCGGTGGACG 59.966 50.000 0.00 0.00 44.88 4.79
78 79 2.034305 GTCTAGCATTATCGGTGGACGT 59.966 50.000 0.00 0.00 44.69 4.34
79 80 2.034179 TCTAGCATTATCGGTGGACGTG 59.966 50.000 0.00 0.00 44.69 4.49
80 81 0.810031 AGCATTATCGGTGGACGTGC 60.810 55.000 0.00 0.00 44.69 5.34
81 82 1.087202 GCATTATCGGTGGACGTGCA 61.087 55.000 5.33 5.33 44.69 4.57
82 83 1.364721 CATTATCGGTGGACGTGCAA 58.635 50.000 12.69 0.00 44.69 4.08
83 84 1.735018 CATTATCGGTGGACGTGCAAA 59.265 47.619 12.69 1.87 44.69 3.68
84 85 1.434555 TTATCGGTGGACGTGCAAAG 58.565 50.000 12.69 9.08 44.69 2.77
85 86 0.604073 TATCGGTGGACGTGCAAAGA 59.396 50.000 12.69 14.57 44.69 2.52
86 87 0.036388 ATCGGTGGACGTGCAAAGAT 60.036 50.000 12.69 16.24 44.69 2.40
87 88 0.250124 TCGGTGGACGTGCAAAGATT 60.250 50.000 12.69 0.00 44.69 2.40
88 89 0.591170 CGGTGGACGTGCAAAGATTT 59.409 50.000 12.69 0.00 37.93 2.17
89 90 1.662876 CGGTGGACGTGCAAAGATTTG 60.663 52.381 12.69 0.84 38.30 2.32
90 91 1.336755 GGTGGACGTGCAAAGATTTGT 59.663 47.619 12.69 0.00 40.24 2.83
91 92 2.384382 GTGGACGTGCAAAGATTTGTG 58.616 47.619 12.69 1.17 40.24 3.33
92 93 2.020720 TGGACGTGCAAAGATTTGTGT 58.979 42.857 7.52 4.00 40.24 3.72
93 94 2.032799 TGGACGTGCAAAGATTTGTGTC 59.967 45.455 7.52 11.25 40.24 3.67
94 95 2.604614 GGACGTGCAAAGATTTGTGTCC 60.605 50.000 20.32 20.32 43.07 4.02
95 96 2.020720 ACGTGCAAAGATTTGTGTCCA 58.979 42.857 7.12 0.00 40.24 4.02
96 97 2.033299 ACGTGCAAAGATTTGTGTCCAG 59.967 45.455 7.12 0.00 40.24 3.86
97 98 2.397549 GTGCAAAGATTTGTGTCCAGC 58.602 47.619 7.12 0.00 40.24 4.85
98 99 1.001487 TGCAAAGATTTGTGTCCAGCG 60.001 47.619 7.12 0.00 40.24 5.18
99 100 1.266718 GCAAAGATTTGTGTCCAGCGA 59.733 47.619 7.12 0.00 40.24 4.93
100 101 2.287547 GCAAAGATTTGTGTCCAGCGAA 60.288 45.455 7.12 0.00 40.24 4.70
101 102 3.612479 GCAAAGATTTGTGTCCAGCGAAT 60.612 43.478 7.12 0.00 40.24 3.34
102 103 4.161333 CAAAGATTTGTGTCCAGCGAATC 58.839 43.478 0.00 0.00 37.13 2.52
103 104 3.340814 AGATTTGTGTCCAGCGAATCT 57.659 42.857 0.00 0.00 40.42 2.40
104 105 3.005554 AGATTTGTGTCCAGCGAATCTG 58.994 45.455 6.91 0.00 42.40 2.90
105 106 0.874390 TTTGTGTCCAGCGAATCTGC 59.126 50.000 0.00 0.00 41.50 4.26
106 107 0.955428 TTGTGTCCAGCGAATCTGCC 60.955 55.000 0.00 0.00 41.50 4.85
107 108 2.125552 TGTCCAGCGAATCTGCCG 60.126 61.111 0.00 0.00 41.50 5.69
108 109 2.125512 GTCCAGCGAATCTGCCGT 60.126 61.111 0.00 0.00 41.50 5.68
109 110 1.741770 GTCCAGCGAATCTGCCGTT 60.742 57.895 0.00 0.00 41.50 4.44
110 111 1.741401 TCCAGCGAATCTGCCGTTG 60.741 57.895 0.00 0.00 41.50 4.10
111 112 2.787249 CAGCGAATCTGCCGTTGG 59.213 61.111 0.00 0.00 35.78 3.77
112 113 2.034879 CAGCGAATCTGCCGTTGGT 61.035 57.895 0.00 0.00 35.78 3.67
113 114 2.034879 AGCGAATCTGCCGTTGGTG 61.035 57.895 0.00 0.00 34.65 4.17
114 115 3.039202 GCGAATCTGCCGTTGGTGG 62.039 63.158 0.00 0.00 0.00 4.61
115 116 1.375396 CGAATCTGCCGTTGGTGGA 60.375 57.895 0.00 0.00 0.00 4.02
116 117 0.744414 CGAATCTGCCGTTGGTGGAT 60.744 55.000 0.00 0.00 0.00 3.41
117 118 1.463674 GAATCTGCCGTTGGTGGATT 58.536 50.000 5.56 5.56 32.41 3.01
118 119 1.818674 GAATCTGCCGTTGGTGGATTT 59.181 47.619 6.79 0.00 30.96 2.17
119 120 1.176527 ATCTGCCGTTGGTGGATTTG 58.823 50.000 0.00 0.00 0.00 2.32
120 121 1.080569 CTGCCGTTGGTGGATTTGC 60.081 57.895 0.00 0.00 0.00 3.68
121 122 1.526575 CTGCCGTTGGTGGATTTGCT 61.527 55.000 0.00 0.00 0.00 3.91
122 123 1.212751 GCCGTTGGTGGATTTGCTC 59.787 57.895 0.00 0.00 0.00 4.26
123 124 1.501741 CCGTTGGTGGATTTGCTCG 59.498 57.895 0.00 0.00 0.00 5.03
124 125 1.501741 CGTTGGTGGATTTGCTCGG 59.498 57.895 0.00 0.00 0.00 4.63
125 126 0.953471 CGTTGGTGGATTTGCTCGGA 60.953 55.000 0.00 0.00 0.00 4.55
126 127 1.463674 GTTGGTGGATTTGCTCGGAT 58.536 50.000 0.00 0.00 0.00 4.18
127 128 1.401905 GTTGGTGGATTTGCTCGGATC 59.598 52.381 0.00 0.00 0.00 3.36
128 129 0.911769 TGGTGGATTTGCTCGGATCT 59.088 50.000 0.00 0.00 0.00 2.75
129 130 1.303309 GGTGGATTTGCTCGGATCTG 58.697 55.000 0.00 0.00 0.00 2.90
130 131 1.134401 GGTGGATTTGCTCGGATCTGA 60.134 52.381 3.71 3.71 0.00 3.27
131 132 2.486191 GGTGGATTTGCTCGGATCTGAT 60.486 50.000 4.28 0.00 0.00 2.90
132 133 3.209410 GTGGATTTGCTCGGATCTGATT 58.791 45.455 4.28 0.00 0.00 2.57
133 134 3.003068 GTGGATTTGCTCGGATCTGATTG 59.997 47.826 4.28 0.00 0.00 2.67
134 135 3.209410 GGATTTGCTCGGATCTGATTGT 58.791 45.455 4.28 0.00 0.00 2.71
135 136 4.141733 TGGATTTGCTCGGATCTGATTGTA 60.142 41.667 4.28 0.00 0.00 2.41
136 137 4.450419 GGATTTGCTCGGATCTGATTGTAG 59.550 45.833 4.28 0.00 0.00 2.74
137 138 4.471904 TTTGCTCGGATCTGATTGTAGT 57.528 40.909 4.28 0.00 0.00 2.73
138 139 4.471904 TTGCTCGGATCTGATTGTAGTT 57.528 40.909 4.28 0.00 0.00 2.24
139 140 4.046938 TGCTCGGATCTGATTGTAGTTC 57.953 45.455 4.28 0.00 0.00 3.01
140 141 3.046390 GCTCGGATCTGATTGTAGTTCG 58.954 50.000 4.28 0.00 0.00 3.95
141 142 3.489398 GCTCGGATCTGATTGTAGTTCGT 60.489 47.826 4.28 0.00 0.00 3.85
142 143 4.283678 CTCGGATCTGATTGTAGTTCGTC 58.716 47.826 4.28 0.00 0.00 4.20
143 144 3.945921 TCGGATCTGATTGTAGTTCGTCT 59.054 43.478 0.00 0.00 0.00 4.18
144 145 5.121105 TCGGATCTGATTGTAGTTCGTCTA 58.879 41.667 0.00 0.00 0.00 2.59
145 146 5.587443 TCGGATCTGATTGTAGTTCGTCTAA 59.413 40.000 0.00 0.00 0.00 2.10
146 147 6.094464 TCGGATCTGATTGTAGTTCGTCTAAA 59.906 38.462 0.00 0.00 0.00 1.85
147 148 6.918569 CGGATCTGATTGTAGTTCGTCTAAAT 59.081 38.462 0.00 0.00 0.00 1.40
148 149 7.435488 CGGATCTGATTGTAGTTCGTCTAAATT 59.565 37.037 0.00 0.00 0.00 1.82
149 150 8.756864 GGATCTGATTGTAGTTCGTCTAAATTC 58.243 37.037 0.00 0.00 0.00 2.17
150 151 9.302345 GATCTGATTGTAGTTCGTCTAAATTCA 57.698 33.333 0.00 0.00 30.36 2.57
151 152 9.823647 ATCTGATTGTAGTTCGTCTAAATTCAT 57.176 29.630 0.00 0.00 30.59 2.57
152 153 9.087424 TCTGATTGTAGTTCGTCTAAATTCATG 57.913 33.333 0.00 0.00 30.59 3.07
153 154 8.771920 TGATTGTAGTTCGTCTAAATTCATGT 57.228 30.769 0.00 0.00 27.68 3.21
154 155 8.655970 TGATTGTAGTTCGTCTAAATTCATGTG 58.344 33.333 0.00 0.00 27.68 3.21
155 156 7.956420 TTGTAGTTCGTCTAAATTCATGTGT 57.044 32.000 0.00 0.00 0.00 3.72
156 157 7.956420 TGTAGTTCGTCTAAATTCATGTGTT 57.044 32.000 0.00 0.00 0.00 3.32
157 158 8.373048 TGTAGTTCGTCTAAATTCATGTGTTT 57.627 30.769 0.00 0.00 0.00 2.83
158 159 8.832521 TGTAGTTCGTCTAAATTCATGTGTTTT 58.167 29.630 0.00 0.00 0.00 2.43
159 160 9.659830 GTAGTTCGTCTAAATTCATGTGTTTTT 57.340 29.630 0.00 0.00 0.00 1.94
161 162 9.878599 AGTTCGTCTAAATTCATGTGTTTTTAG 57.121 29.630 0.00 3.43 34.47 1.85
162 163 9.113876 GTTCGTCTAAATTCATGTGTTTTTAGG 57.886 33.333 13.89 6.49 34.13 2.69
163 164 8.385898 TCGTCTAAATTCATGTGTTTTTAGGT 57.614 30.769 13.89 0.00 34.13 3.08
164 165 8.842280 TCGTCTAAATTCATGTGTTTTTAGGTT 58.158 29.630 13.89 0.00 34.13 3.50
165 166 8.901748 CGTCTAAATTCATGTGTTTTTAGGTTG 58.098 33.333 13.89 6.21 34.13 3.77
166 167 9.191995 GTCTAAATTCATGTGTTTTTAGGTTGG 57.808 33.333 13.89 0.00 34.13 3.77
167 168 9.137459 TCTAAATTCATGTGTTTTTAGGTTGGA 57.863 29.630 13.89 0.00 34.13 3.53
168 169 9.927668 CTAAATTCATGTGTTTTTAGGTTGGAT 57.072 29.630 0.00 0.00 31.22 3.41
169 170 8.831715 AAATTCATGTGTTTTTAGGTTGGATC 57.168 30.769 0.00 0.00 0.00 3.36
170 171 7.781324 ATTCATGTGTTTTTAGGTTGGATCT 57.219 32.000 0.00 0.00 0.00 2.75
171 172 7.595819 TTCATGTGTTTTTAGGTTGGATCTT 57.404 32.000 0.00 0.00 0.00 2.40
172 173 7.595819 TCATGTGTTTTTAGGTTGGATCTTT 57.404 32.000 0.00 0.00 0.00 2.52
173 174 8.017418 TCATGTGTTTTTAGGTTGGATCTTTT 57.983 30.769 0.00 0.00 0.00 2.27
174 175 8.141268 TCATGTGTTTTTAGGTTGGATCTTTTC 58.859 33.333 0.00 0.00 0.00 2.29
175 176 6.500041 TGTGTTTTTAGGTTGGATCTTTTCG 58.500 36.000 0.00 0.00 0.00 3.46
176 177 6.319152 TGTGTTTTTAGGTTGGATCTTTTCGA 59.681 34.615 0.00 0.00 0.00 3.71
177 178 7.013846 TGTGTTTTTAGGTTGGATCTTTTCGAT 59.986 33.333 0.00 0.00 34.25 3.59
178 179 7.537649 GTGTTTTTAGGTTGGATCTTTTCGATC 59.462 37.037 0.00 0.00 46.37 3.69
179 180 7.447238 TGTTTTTAGGTTGGATCTTTTCGATCT 59.553 33.333 0.00 0.00 46.33 2.75
180 181 8.943002 GTTTTTAGGTTGGATCTTTTCGATCTA 58.057 33.333 0.00 0.00 46.33 1.98
181 182 8.488651 TTTTAGGTTGGATCTTTTCGATCTAC 57.511 34.615 0.00 2.03 46.33 2.59
182 183 4.683832 AGGTTGGATCTTTTCGATCTACG 58.316 43.478 0.00 0.00 46.33 3.51
183 184 3.245519 GGTTGGATCTTTTCGATCTACGC 59.754 47.826 0.00 0.00 46.33 4.42
184 185 4.113354 GTTGGATCTTTTCGATCTACGCT 58.887 43.478 0.00 0.00 46.33 5.07
185 186 5.279384 GTTGGATCTTTTCGATCTACGCTA 58.721 41.667 0.00 0.00 46.33 4.26
186 187 4.856664 TGGATCTTTTCGATCTACGCTAC 58.143 43.478 0.00 0.00 46.33 3.58
187 188 4.579340 TGGATCTTTTCGATCTACGCTACT 59.421 41.667 0.00 0.00 46.33 2.57
188 189 5.067413 TGGATCTTTTCGATCTACGCTACTT 59.933 40.000 0.00 0.00 46.33 2.24
189 190 5.978322 GGATCTTTTCGATCTACGCTACTTT 59.022 40.000 0.00 0.00 46.33 2.66
190 191 6.476053 GGATCTTTTCGATCTACGCTACTTTT 59.524 38.462 0.00 0.00 46.33 2.27
191 192 6.866179 TCTTTTCGATCTACGCTACTTTTC 57.134 37.500 0.00 0.00 42.26 2.29
192 193 6.384224 TCTTTTCGATCTACGCTACTTTTCA 58.616 36.000 0.00 0.00 42.26 2.69
193 194 7.033791 TCTTTTCGATCTACGCTACTTTTCAT 58.966 34.615 0.00 0.00 42.26 2.57
194 195 6.807708 TTTCGATCTACGCTACTTTTCATC 57.192 37.500 0.00 0.00 42.26 2.92
195 196 4.524749 TCGATCTACGCTACTTTTCATCG 58.475 43.478 0.00 0.00 42.26 3.84
196 197 4.271776 TCGATCTACGCTACTTTTCATCGA 59.728 41.667 0.00 0.00 42.26 3.59
197 198 4.376279 CGATCTACGCTACTTTTCATCGAC 59.624 45.833 0.00 0.00 35.08 4.20
198 199 3.677601 TCTACGCTACTTTTCATCGACG 58.322 45.455 0.00 0.00 0.00 5.12
199 200 1.625616 ACGCTACTTTTCATCGACGG 58.374 50.000 0.00 0.00 0.00 4.79
200 201 0.297820 CGCTACTTTTCATCGACGGC 59.702 55.000 0.00 0.00 0.00 5.68
201 202 0.297820 GCTACTTTTCATCGACGGCG 59.702 55.000 2.87 2.87 39.35 6.46
202 203 0.921347 CTACTTTTCATCGACGGCGG 59.079 55.000 12.58 0.00 38.28 6.13
203 204 0.244450 TACTTTTCATCGACGGCGGT 59.756 50.000 12.58 0.00 38.28 5.68
204 205 0.601841 ACTTTTCATCGACGGCGGTT 60.602 50.000 12.58 0.00 38.28 4.44
205 206 0.179225 CTTTTCATCGACGGCGGTTG 60.179 55.000 12.58 9.82 38.28 3.77
206 207 2.177654 TTTTCATCGACGGCGGTTGC 62.178 55.000 12.58 0.00 41.71 4.17
207 208 3.583276 TTCATCGACGGCGGTTGCT 62.583 57.895 12.58 0.00 42.25 3.91
208 209 2.202690 CATCGACGGCGGTTGCTA 60.203 61.111 12.58 0.00 42.25 3.49
209 210 1.591594 CATCGACGGCGGTTGCTAT 60.592 57.895 12.58 0.00 42.25 2.97
210 211 1.299926 ATCGACGGCGGTTGCTATC 60.300 57.895 12.58 0.00 42.25 2.08
211 212 1.735376 ATCGACGGCGGTTGCTATCT 61.735 55.000 12.58 0.00 42.25 1.98
212 213 2.230940 CGACGGCGGTTGCTATCTG 61.231 63.158 13.24 0.00 42.25 2.90
213 214 2.511600 ACGGCGGTTGCTATCTGC 60.512 61.111 13.24 0.00 42.25 4.26
214 215 2.202932 CGGCGGTTGCTATCTGCT 60.203 61.111 0.00 0.00 43.37 4.24
215 216 2.528743 CGGCGGTTGCTATCTGCTG 61.529 63.158 0.00 4.90 43.37 4.41
216 217 1.450312 GGCGGTTGCTATCTGCTGT 60.450 57.895 7.00 0.00 43.37 4.40
217 218 1.709147 GGCGGTTGCTATCTGCTGTG 61.709 60.000 7.00 0.00 43.37 3.66
218 219 1.717937 CGGTTGCTATCTGCTGTGC 59.282 57.895 0.00 0.00 43.37 4.57
219 220 0.742281 CGGTTGCTATCTGCTGTGCT 60.742 55.000 0.00 0.00 43.37 4.40
220 221 0.731417 GGTTGCTATCTGCTGTGCTG 59.269 55.000 0.00 0.00 43.37 4.41
221 222 0.731417 GTTGCTATCTGCTGTGCTGG 59.269 55.000 0.00 0.00 43.37 4.85
222 223 0.325933 TTGCTATCTGCTGTGCTGGT 59.674 50.000 0.00 0.00 43.37 4.00
223 224 0.107993 TGCTATCTGCTGTGCTGGTC 60.108 55.000 0.00 0.00 43.37 4.02
224 225 0.177604 GCTATCTGCTGTGCTGGTCT 59.822 55.000 0.00 0.00 38.95 3.85
225 226 1.410517 GCTATCTGCTGTGCTGGTCTA 59.589 52.381 0.00 0.00 38.95 2.59
226 227 2.159043 GCTATCTGCTGTGCTGGTCTAA 60.159 50.000 0.00 0.00 38.95 2.10
227 228 2.393271 ATCTGCTGTGCTGGTCTAAC 57.607 50.000 0.00 0.00 0.00 2.34
228 229 0.038251 TCTGCTGTGCTGGTCTAACG 60.038 55.000 0.00 0.00 0.00 3.18
229 230 1.005037 TGCTGTGCTGGTCTAACGG 60.005 57.895 0.00 0.00 0.00 4.44
230 231 2.391389 GCTGTGCTGGTCTAACGGC 61.391 63.158 0.00 0.00 43.06 5.68
231 232 2.048597 TGTGCTGGTCTAACGGCG 60.049 61.111 4.80 4.80 45.70 6.46
232 233 2.260434 GTGCTGGTCTAACGGCGA 59.740 61.111 16.62 0.00 45.70 5.54
233 234 1.153628 GTGCTGGTCTAACGGCGAT 60.154 57.895 16.62 3.59 45.70 4.58
234 235 0.739813 GTGCTGGTCTAACGGCGATT 60.740 55.000 16.62 6.95 45.70 3.34
235 236 0.739462 TGCTGGTCTAACGGCGATTG 60.739 55.000 16.62 2.20 45.70 2.67
236 237 2.006772 CTGGTCTAACGGCGATTGC 58.993 57.895 16.62 0.00 41.71 3.56
237 238 0.460284 CTGGTCTAACGGCGATTGCT 60.460 55.000 16.62 0.00 42.25 3.91
244 245 2.099062 CGGCGATTGCTGTTCTGC 59.901 61.111 0.00 0.00 42.79 4.26
245 246 2.393768 CGGCGATTGCTGTTCTGCT 61.394 57.895 0.00 0.00 42.79 4.24
246 247 1.136147 GGCGATTGCTGTTCTGCTG 59.864 57.895 4.59 0.00 42.25 4.41
247 248 1.513586 GCGATTGCTGTTCTGCTGC 60.514 57.895 0.00 0.00 41.65 5.25
248 249 1.225936 CGATTGCTGTTCTGCTGCG 60.226 57.895 0.00 0.00 43.81 5.18
249 250 1.513586 GATTGCTGTTCTGCTGCGC 60.514 57.895 0.00 0.00 43.81 6.09
250 251 1.919956 GATTGCTGTTCTGCTGCGCT 61.920 55.000 9.73 0.00 43.81 5.92
251 252 2.196382 ATTGCTGTTCTGCTGCGCTG 62.196 55.000 9.73 10.04 43.81 5.18
252 253 4.099170 GCTGTTCTGCTGCGCTGG 62.099 66.667 16.47 6.50 32.54 4.85
253 254 2.667536 CTGTTCTGCTGCGCTGGT 60.668 61.111 16.47 0.00 0.00 4.00
254 255 2.666190 TGTTCTGCTGCGCTGGTC 60.666 61.111 16.47 0.62 0.00 4.02
255 256 3.426568 GTTCTGCTGCGCTGGTCC 61.427 66.667 16.47 0.00 0.00 4.46
256 257 3.630013 TTCTGCTGCGCTGGTCCT 61.630 61.111 16.47 0.00 0.00 3.85
257 258 2.282783 TTCTGCTGCGCTGGTCCTA 61.283 57.895 16.47 0.00 0.00 2.94
258 259 1.617018 TTCTGCTGCGCTGGTCCTAT 61.617 55.000 16.47 0.00 0.00 2.57
259 260 1.886313 CTGCTGCGCTGGTCCTATG 60.886 63.158 16.47 0.00 0.00 2.23
260 261 2.302199 CTGCTGCGCTGGTCCTATGA 62.302 60.000 16.47 0.00 0.00 2.15
261 262 1.593750 GCTGCGCTGGTCCTATGAG 60.594 63.158 16.47 0.00 0.00 2.90
262 263 1.068753 CTGCGCTGGTCCTATGAGG 59.931 63.158 9.73 0.00 36.46 3.86
263 264 1.680522 CTGCGCTGGTCCTATGAGGT 61.681 60.000 9.73 0.00 36.53 3.85
264 265 1.068250 GCGCTGGTCCTATGAGGTC 59.932 63.158 0.00 0.00 36.53 3.85
265 266 1.395826 GCGCTGGTCCTATGAGGTCT 61.396 60.000 0.00 0.00 36.53 3.85
266 267 1.115467 CGCTGGTCCTATGAGGTCTT 58.885 55.000 0.00 0.00 36.53 3.01
267 268 2.307768 CGCTGGTCCTATGAGGTCTTA 58.692 52.381 0.00 0.00 36.53 2.10
268 269 2.294791 CGCTGGTCCTATGAGGTCTTAG 59.705 54.545 0.00 0.00 36.53 2.18
269 270 2.036604 GCTGGTCCTATGAGGTCTTAGC 59.963 54.545 0.00 0.00 36.53 3.09
270 271 3.300388 CTGGTCCTATGAGGTCTTAGCA 58.700 50.000 0.00 0.00 36.53 3.49
271 272 3.031736 TGGTCCTATGAGGTCTTAGCAC 58.968 50.000 0.00 0.00 36.53 4.40
272 273 3.031736 GGTCCTATGAGGTCTTAGCACA 58.968 50.000 0.00 0.00 36.53 4.57
273 274 3.451178 GGTCCTATGAGGTCTTAGCACAA 59.549 47.826 0.00 0.00 36.53 3.33
274 275 4.434520 GTCCTATGAGGTCTTAGCACAAC 58.565 47.826 0.00 0.00 36.53 3.32
275 276 3.130516 TCCTATGAGGTCTTAGCACAACG 59.869 47.826 0.00 0.00 36.53 4.10
276 277 3.130516 CCTATGAGGTCTTAGCACAACGA 59.869 47.826 0.00 0.00 0.00 3.85
277 278 2.433868 TGAGGTCTTAGCACAACGAC 57.566 50.000 0.00 0.00 0.00 4.34
278 279 1.961394 TGAGGTCTTAGCACAACGACT 59.039 47.619 0.00 0.00 0.00 4.18
279 280 2.364324 TGAGGTCTTAGCACAACGACTT 59.636 45.455 0.00 0.00 0.00 3.01
280 281 2.987821 GAGGTCTTAGCACAACGACTTC 59.012 50.000 0.00 0.00 0.00 3.01
281 282 2.067013 GGTCTTAGCACAACGACTTCC 58.933 52.381 0.00 0.00 0.00 3.46
282 283 1.719780 GTCTTAGCACAACGACTTCCG 59.280 52.381 0.00 0.00 45.44 4.30
283 284 1.610038 TCTTAGCACAACGACTTCCGA 59.390 47.619 0.00 0.00 41.76 4.55
284 285 1.719780 CTTAGCACAACGACTTCCGAC 59.280 52.381 0.00 0.00 41.76 4.79
285 286 0.956633 TAGCACAACGACTTCCGACT 59.043 50.000 0.00 0.00 41.76 4.18
286 287 0.597637 AGCACAACGACTTCCGACTG 60.598 55.000 0.00 0.00 41.76 3.51
287 288 0.874607 GCACAACGACTTCCGACTGT 60.875 55.000 0.00 0.00 41.76 3.55
288 289 1.129326 CACAACGACTTCCGACTGTC 58.871 55.000 0.00 0.00 41.76 3.51
289 290 1.030457 ACAACGACTTCCGACTGTCT 58.970 50.000 6.21 0.00 41.76 3.41
290 291 2.031420 CACAACGACTTCCGACTGTCTA 60.031 50.000 6.21 0.00 41.76 2.59
291 292 2.031333 ACAACGACTTCCGACTGTCTAC 60.031 50.000 6.21 0.00 41.76 2.59
292 293 2.181954 ACGACTTCCGACTGTCTACT 57.818 50.000 6.21 0.00 41.76 2.57
293 294 3.325293 ACGACTTCCGACTGTCTACTA 57.675 47.619 6.21 0.00 41.76 1.82
294 295 3.871485 ACGACTTCCGACTGTCTACTAT 58.129 45.455 6.21 0.00 41.76 2.12
295 296 5.016051 ACGACTTCCGACTGTCTACTATA 57.984 43.478 6.21 0.00 41.76 1.31
296 297 5.423015 ACGACTTCCGACTGTCTACTATAA 58.577 41.667 6.21 0.00 41.76 0.98
297 298 5.293079 ACGACTTCCGACTGTCTACTATAAC 59.707 44.000 6.21 0.00 41.76 1.89
298 299 5.277250 CGACTTCCGACTGTCTACTATAACC 60.277 48.000 6.21 0.00 41.76 2.85
299 300 5.503927 ACTTCCGACTGTCTACTATAACCA 58.496 41.667 6.21 0.00 0.00 3.67
300 301 5.589452 ACTTCCGACTGTCTACTATAACCAG 59.411 44.000 6.21 0.00 0.00 4.00
301 302 5.108187 TCCGACTGTCTACTATAACCAGT 57.892 43.478 6.21 0.00 38.98 4.00
302 303 5.121811 TCCGACTGTCTACTATAACCAGTC 58.878 45.833 6.21 7.79 45.32 3.51
303 304 5.104610 TCCGACTGTCTACTATAACCAGTCT 60.105 44.000 14.08 0.00 46.14 3.24
304 305 5.589452 CCGACTGTCTACTATAACCAGTCTT 59.411 44.000 14.08 0.00 46.14 3.01
305 306 6.458478 CCGACTGTCTACTATAACCAGTCTTG 60.458 46.154 14.08 4.16 46.14 3.02
306 307 6.210287 ACTGTCTACTATAACCAGTCTTGC 57.790 41.667 0.00 0.00 30.94 4.01
307 308 5.127356 ACTGTCTACTATAACCAGTCTTGCC 59.873 44.000 0.00 0.00 30.94 4.52
308 309 4.404715 TGTCTACTATAACCAGTCTTGCCC 59.595 45.833 0.00 0.00 0.00 5.36
309 310 2.981859 ACTATAACCAGTCTTGCCCG 57.018 50.000 0.00 0.00 0.00 6.13
310 311 1.485066 ACTATAACCAGTCTTGCCCGG 59.515 52.381 0.00 0.00 0.00 5.73
311 312 0.179468 TATAACCAGTCTTGCCCGGC 59.821 55.000 1.04 1.04 0.00 6.13
312 313 1.562672 ATAACCAGTCTTGCCCGGCT 61.563 55.000 11.61 0.00 0.00 5.52
313 314 2.180159 TAACCAGTCTTGCCCGGCTC 62.180 60.000 11.61 0.00 0.00 4.70
314 315 4.785453 CCAGTCTTGCCCGGCTCC 62.785 72.222 11.61 0.00 0.00 4.70
331 332 3.470888 CGACGAGGGAGGGGCAAT 61.471 66.667 0.00 0.00 0.00 3.56
332 333 2.190578 GACGAGGGAGGGGCAATG 59.809 66.667 0.00 0.00 0.00 2.82
333 334 2.285368 ACGAGGGAGGGGCAATGA 60.285 61.111 0.00 0.00 0.00 2.57
334 335 2.190578 CGAGGGAGGGGCAATGAC 59.809 66.667 0.00 0.00 0.00 3.06
335 336 2.190578 GAGGGAGGGGCAATGACG 59.809 66.667 0.00 0.00 0.00 4.35
336 337 2.285368 AGGGAGGGGCAATGACGA 60.285 61.111 0.00 0.00 0.00 4.20
337 338 2.124695 GGGAGGGGCAATGACGAC 60.125 66.667 0.00 0.00 0.00 4.34
338 339 2.511600 GGAGGGGCAATGACGACG 60.512 66.667 0.00 0.00 0.00 5.12
339 340 2.264794 GAGGGGCAATGACGACGT 59.735 61.111 0.00 0.00 0.00 4.34
340 341 1.810030 GAGGGGCAATGACGACGTC 60.810 63.158 20.97 20.97 0.00 4.34
341 342 3.186047 GGGGCAATGACGACGTCG 61.186 66.667 34.58 34.58 46.33 5.12
360 361 4.379174 GCCTTCGGCTCACTTCAA 57.621 55.556 0.00 0.00 46.69 2.69
361 362 2.859992 GCCTTCGGCTCACTTCAAT 58.140 52.632 0.00 0.00 46.69 2.57
362 363 0.449388 GCCTTCGGCTCACTTCAATG 59.551 55.000 0.00 0.00 46.69 2.82
363 364 0.449388 CCTTCGGCTCACTTCAATGC 59.551 55.000 0.00 0.00 0.00 3.56
364 365 1.446907 CTTCGGCTCACTTCAATGCT 58.553 50.000 0.00 0.00 0.00 3.79
365 366 1.808945 CTTCGGCTCACTTCAATGCTT 59.191 47.619 0.00 0.00 0.00 3.91
366 367 2.760634 TCGGCTCACTTCAATGCTTA 57.239 45.000 0.00 0.00 0.00 3.09
367 368 3.266510 TCGGCTCACTTCAATGCTTAT 57.733 42.857 0.00 0.00 0.00 1.73
368 369 4.400529 TCGGCTCACTTCAATGCTTATA 57.599 40.909 0.00 0.00 0.00 0.98
369 370 4.371786 TCGGCTCACTTCAATGCTTATAG 58.628 43.478 0.00 0.00 0.00 1.31
370 371 4.122776 CGGCTCACTTCAATGCTTATAGT 58.877 43.478 0.00 0.00 0.00 2.12
371 372 4.210120 CGGCTCACTTCAATGCTTATAGTC 59.790 45.833 0.00 0.00 0.00 2.59
372 373 4.210120 GGCTCACTTCAATGCTTATAGTCG 59.790 45.833 0.00 0.00 0.00 4.18
373 374 4.806247 GCTCACTTCAATGCTTATAGTCGT 59.194 41.667 0.00 0.00 0.00 4.34
374 375 5.051374 GCTCACTTCAATGCTTATAGTCGTC 60.051 44.000 0.00 0.00 0.00 4.20
375 376 5.034797 TCACTTCAATGCTTATAGTCGTCG 58.965 41.667 0.00 0.00 0.00 5.12
376 377 3.797256 ACTTCAATGCTTATAGTCGTCGC 59.203 43.478 0.00 0.00 0.00 5.19
377 378 3.710326 TCAATGCTTATAGTCGTCGCT 57.290 42.857 0.00 0.00 0.00 4.93
378 379 4.823790 TCAATGCTTATAGTCGTCGCTA 57.176 40.909 0.00 0.00 0.00 4.26
379 380 4.784329 TCAATGCTTATAGTCGTCGCTAG 58.216 43.478 0.00 0.00 0.00 3.42
380 381 4.514066 TCAATGCTTATAGTCGTCGCTAGA 59.486 41.667 0.00 0.00 0.00 2.43
381 382 5.181433 TCAATGCTTATAGTCGTCGCTAGAT 59.819 40.000 0.00 0.00 0.00 1.98
382 383 4.406001 TGCTTATAGTCGTCGCTAGATG 57.594 45.455 0.00 0.00 34.75 2.90
383 384 3.188667 TGCTTATAGTCGTCGCTAGATGG 59.811 47.826 0.00 0.00 34.23 3.51
384 385 3.188873 GCTTATAGTCGTCGCTAGATGGT 59.811 47.826 0.00 0.00 34.23 3.55
385 386 4.669708 GCTTATAGTCGTCGCTAGATGGTC 60.670 50.000 0.00 0.00 34.23 4.02
386 387 2.616634 TAGTCGTCGCTAGATGGTCT 57.383 50.000 0.00 0.00 34.23 3.85
387 388 2.616634 AGTCGTCGCTAGATGGTCTA 57.383 50.000 0.00 0.00 34.23 2.59
388 389 2.211806 AGTCGTCGCTAGATGGTCTAC 58.788 52.381 0.00 0.00 34.23 2.59
389 390 1.070710 GTCGTCGCTAGATGGTCTACG 60.071 57.143 0.00 0.00 34.23 3.51
390 391 0.235144 CGTCGCTAGATGGTCTACGG 59.765 60.000 0.00 0.00 30.31 4.02
391 392 1.590932 GTCGCTAGATGGTCTACGGA 58.409 55.000 0.00 0.00 30.31 4.69
392 393 2.152830 GTCGCTAGATGGTCTACGGAT 58.847 52.381 0.00 0.00 30.31 4.18
393 394 2.160022 GTCGCTAGATGGTCTACGGATC 59.840 54.545 0.00 0.00 30.31 3.36
394 395 2.038689 TCGCTAGATGGTCTACGGATCT 59.961 50.000 0.00 0.00 30.31 2.75
395 396 2.160615 CGCTAGATGGTCTACGGATCTG 59.839 54.545 0.00 0.00 0.00 2.90
396 397 2.490115 GCTAGATGGTCTACGGATCTGG 59.510 54.545 6.47 0.00 0.00 3.86
397 398 3.811098 GCTAGATGGTCTACGGATCTGGA 60.811 52.174 6.47 0.00 28.72 3.86
398 399 3.534357 AGATGGTCTACGGATCTGGAT 57.466 47.619 6.47 0.00 0.00 3.41
399 400 3.161067 AGATGGTCTACGGATCTGGATG 58.839 50.000 6.47 0.00 0.00 3.51
400 401 2.454336 TGGTCTACGGATCTGGATGT 57.546 50.000 6.47 0.00 0.00 3.06
401 402 3.588210 TGGTCTACGGATCTGGATGTA 57.412 47.619 6.47 0.00 0.00 2.29
402 403 3.905968 TGGTCTACGGATCTGGATGTAA 58.094 45.455 6.47 0.00 0.00 2.41
403 404 4.480115 TGGTCTACGGATCTGGATGTAAT 58.520 43.478 6.47 0.00 0.00 1.89
404 405 4.899457 TGGTCTACGGATCTGGATGTAATT 59.101 41.667 6.47 0.00 0.00 1.40
405 406 5.365605 TGGTCTACGGATCTGGATGTAATTT 59.634 40.000 6.47 0.00 0.00 1.82
406 407 6.126883 TGGTCTACGGATCTGGATGTAATTTT 60.127 38.462 6.47 0.00 0.00 1.82
407 408 6.766467 GGTCTACGGATCTGGATGTAATTTTT 59.234 38.462 6.47 0.00 0.00 1.94
408 409 7.929785 GGTCTACGGATCTGGATGTAATTTTTA 59.070 37.037 6.47 0.00 0.00 1.52
409 410 9.490379 GTCTACGGATCTGGATGTAATTTTTAT 57.510 33.333 6.47 0.00 0.00 1.40
447 448 8.741101 TTATTATATGGCGTGATTGAAAATGC 57.259 30.769 0.00 0.00 0.00 3.56
448 449 4.652421 ATATGGCGTGATTGAAAATGCA 57.348 36.364 0.00 0.00 0.00 3.96
449 450 3.530265 ATGGCGTGATTGAAAATGCAT 57.470 38.095 0.00 0.00 0.00 3.96
451 452 4.031418 TGGCGTGATTGAAAATGCATAG 57.969 40.909 0.00 0.00 0.00 2.23
453 454 4.338964 TGGCGTGATTGAAAATGCATAGAT 59.661 37.500 0.00 0.00 0.00 1.98
454 455 4.913924 GGCGTGATTGAAAATGCATAGATC 59.086 41.667 0.00 0.00 0.00 2.75
455 456 5.506151 GGCGTGATTGAAAATGCATAGATCA 60.506 40.000 0.00 2.01 0.00 2.92
456 457 5.972973 GCGTGATTGAAAATGCATAGATCAA 59.027 36.000 18.37 18.37 34.80 2.57
457 458 6.473131 GCGTGATTGAAAATGCATAGATCAAA 59.527 34.615 19.38 7.27 34.09 2.69
458 459 7.305820 GCGTGATTGAAAATGCATAGATCAAAG 60.306 37.037 19.38 13.98 34.09 2.77
465 466 9.630098 TGAAAATGCATAGATCAAAGTTTTCTC 57.370 29.630 0.00 0.00 36.08 2.87
513 516 0.956633 TCACGACCAAGTTACGAGCT 59.043 50.000 0.00 0.00 0.00 4.09
563 566 2.049156 CGACTGAGCCAAGCGTGA 60.049 61.111 0.00 0.00 0.00 4.35
868 878 4.295119 ACGTCCTGTGGCGTGGAC 62.295 66.667 11.68 11.68 46.69 4.02
1267 1283 4.373116 GGTGTCCTTCGCGGCAGA 62.373 66.667 6.13 0.00 0.00 4.26
1379 1395 1.808531 GATGCAAACCTGTGCTGGCA 61.809 55.000 0.00 0.00 45.17 4.92
1380 1396 1.189524 ATGCAAACCTGTGCTGGCAT 61.190 50.000 0.00 0.00 45.17 4.40
1381 1397 1.373748 GCAAACCTGTGCTGGCATG 60.374 57.895 0.00 0.00 41.51 4.06
1382 1398 1.290955 CAAACCTGTGCTGGCATGG 59.709 57.895 13.15 13.15 0.00 3.66
1383 1399 2.576832 AAACCTGTGCTGGCATGGC 61.577 57.895 13.29 13.29 0.00 4.40
1549 1565 6.020599 CGTTCGTATAAAACCATCTCTCTGTG 60.021 42.308 0.00 0.00 0.00 3.66
1559 1579 6.114187 ACCATCTCTCTGTGTACAATTCAA 57.886 37.500 0.00 0.00 0.00 2.69
1673 1699 4.038042 CGAGAGCATGAAGAAGGTATACCA 59.962 45.833 23.87 2.07 38.89 3.25
1809 1835 1.760613 ACACTCCAGGAGACGAACAAA 59.239 47.619 24.45 0.00 33.32 2.83
1855 1881 3.953612 TCATCTGCCGCTTCCATTATTTT 59.046 39.130 0.00 0.00 0.00 1.82
1856 1882 5.129634 TCATCTGCCGCTTCCATTATTTTA 58.870 37.500 0.00 0.00 0.00 1.52
1857 1883 5.592282 TCATCTGCCGCTTCCATTATTTTAA 59.408 36.000 0.00 0.00 0.00 1.52
1963 1994 1.242076 GAGCCACATGACTGCACTTT 58.758 50.000 0.00 0.00 0.00 2.66
1964 1995 2.426522 GAGCCACATGACTGCACTTTA 58.573 47.619 0.00 0.00 0.00 1.85
2014 2051 1.119684 TCGCTAGCTAGGCCATCAAA 58.880 50.000 22.10 0.00 0.00 2.69
2193 2236 3.782244 CCGCACACGCTTCTGCTC 61.782 66.667 0.00 0.00 38.22 4.26
2222 2267 2.877300 GCTCATGCCCAAGACTCAAAGA 60.877 50.000 0.00 0.00 0.00 2.52
2223 2268 3.008330 CTCATGCCCAAGACTCAAAGAG 58.992 50.000 0.00 0.00 35.52 2.85
2224 2269 2.639347 TCATGCCCAAGACTCAAAGAGA 59.361 45.455 0.31 0.00 33.32 3.10
2225 2270 2.550830 TGCCCAAGACTCAAAGAGAC 57.449 50.000 0.31 0.00 33.32 3.36
2226 2271 1.270305 TGCCCAAGACTCAAAGAGACG 60.270 52.381 0.31 0.00 33.32 4.18
2227 2272 1.270358 GCCCAAGACTCAAAGAGACGT 60.270 52.381 0.31 0.00 33.32 4.34
2228 2273 2.029290 GCCCAAGACTCAAAGAGACGTA 60.029 50.000 0.31 0.00 33.32 3.57
2229 2274 3.368531 GCCCAAGACTCAAAGAGACGTAT 60.369 47.826 0.31 0.00 33.32 3.06
2230 2275 4.822026 CCCAAGACTCAAAGAGACGTATT 58.178 43.478 0.31 0.00 33.32 1.89
2231 2276 5.238583 CCCAAGACTCAAAGAGACGTATTT 58.761 41.667 0.31 0.00 33.32 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.221884 CCTTATTCCATCTTCAGAGAGCCAT 60.222 44.000 0.00 0.00 34.85 4.40
1 2 4.102210 CCTTATTCCATCTTCAGAGAGCCA 59.898 45.833 0.00 0.00 34.85 4.75
2 3 4.102367 ACCTTATTCCATCTTCAGAGAGCC 59.898 45.833 0.00 0.00 34.85 4.70
3 4 5.289083 ACCTTATTCCATCTTCAGAGAGC 57.711 43.478 0.00 0.00 34.85 4.09
4 5 7.123355 AGAACCTTATTCCATCTTCAGAGAG 57.877 40.000 0.00 0.00 34.85 3.20
5 6 6.098982 GGAGAACCTTATTCCATCTTCAGAGA 59.901 42.308 0.00 0.00 36.09 3.10
6 7 6.126940 TGGAGAACCTTATTCCATCTTCAGAG 60.127 42.308 0.00 0.00 36.13 3.35
7 8 5.726308 TGGAGAACCTTATTCCATCTTCAGA 59.274 40.000 0.00 0.00 36.13 3.27
8 9 5.819901 GTGGAGAACCTTATTCCATCTTCAG 59.180 44.000 0.00 0.00 42.54 3.02
9 10 5.626809 CGTGGAGAACCTTATTCCATCTTCA 60.627 44.000 0.00 0.00 42.54 3.02
10 11 4.811557 CGTGGAGAACCTTATTCCATCTTC 59.188 45.833 0.00 0.00 42.54 2.87
11 12 4.770795 CGTGGAGAACCTTATTCCATCTT 58.229 43.478 0.00 0.00 42.54 2.40
12 13 3.432326 GCGTGGAGAACCTTATTCCATCT 60.432 47.826 0.00 0.00 42.54 2.90
13 14 2.872858 GCGTGGAGAACCTTATTCCATC 59.127 50.000 0.00 0.00 42.54 3.51
14 15 2.421529 GGCGTGGAGAACCTTATTCCAT 60.422 50.000 0.00 0.00 42.54 3.41
15 16 1.065709 GGCGTGGAGAACCTTATTCCA 60.066 52.381 0.00 0.00 38.62 3.53
16 17 1.209747 AGGCGTGGAGAACCTTATTCC 59.790 52.381 0.00 0.00 37.04 3.01
17 18 2.693267 AGGCGTGGAGAACCTTATTC 57.307 50.000 0.00 0.00 37.04 1.75
18 19 3.370209 GGTTAGGCGTGGAGAACCTTATT 60.370 47.826 2.28 0.00 38.65 1.40
19 20 2.169978 GGTTAGGCGTGGAGAACCTTAT 59.830 50.000 2.28 0.00 38.65 1.73
20 21 1.551883 GGTTAGGCGTGGAGAACCTTA 59.448 52.381 2.28 0.00 38.65 2.69
21 22 0.323957 GGTTAGGCGTGGAGAACCTT 59.676 55.000 2.28 0.00 38.65 3.50
22 23 1.551019 GGGTTAGGCGTGGAGAACCT 61.551 60.000 8.33 0.00 41.00 3.50
23 24 1.078637 GGGTTAGGCGTGGAGAACC 60.079 63.158 1.00 1.00 40.58 3.62
24 25 0.672711 GTGGGTTAGGCGTGGAGAAC 60.673 60.000 0.00 0.00 0.00 3.01
25 26 0.834687 AGTGGGTTAGGCGTGGAGAA 60.835 55.000 0.00 0.00 0.00 2.87
26 27 0.834687 AAGTGGGTTAGGCGTGGAGA 60.835 55.000 0.00 0.00 0.00 3.71
27 28 0.391263 GAAGTGGGTTAGGCGTGGAG 60.391 60.000 0.00 0.00 0.00 3.86
28 29 0.834687 AGAAGTGGGTTAGGCGTGGA 60.835 55.000 0.00 0.00 0.00 4.02
29 30 0.391263 GAGAAGTGGGTTAGGCGTGG 60.391 60.000 0.00 0.00 0.00 4.94
30 31 0.736325 CGAGAAGTGGGTTAGGCGTG 60.736 60.000 0.00 0.00 0.00 5.34
31 32 0.896940 TCGAGAAGTGGGTTAGGCGT 60.897 55.000 0.00 0.00 0.00 5.68
32 33 0.460311 ATCGAGAAGTGGGTTAGGCG 59.540 55.000 0.00 0.00 0.00 5.52
33 34 1.473434 CCATCGAGAAGTGGGTTAGGC 60.473 57.143 0.00 0.00 0.00 3.93
34 35 1.831736 ACCATCGAGAAGTGGGTTAGG 59.168 52.381 7.65 0.00 39.86 2.69
35 36 2.233922 ACACCATCGAGAAGTGGGTTAG 59.766 50.000 14.48 2.56 39.86 2.34
36 37 2.028476 CACACCATCGAGAAGTGGGTTA 60.028 50.000 14.48 0.00 39.86 2.85
37 38 1.056660 ACACCATCGAGAAGTGGGTT 58.943 50.000 14.48 0.00 39.86 4.11
38 39 0.321671 CACACCATCGAGAAGTGGGT 59.678 55.000 14.48 4.72 39.86 4.51
39 40 0.321671 ACACACCATCGAGAAGTGGG 59.678 55.000 11.69 11.69 40.81 4.61
40 41 1.273606 AGACACACCATCGAGAAGTGG 59.726 52.381 14.48 8.85 41.35 4.00
41 42 2.732412 AGACACACCATCGAGAAGTG 57.268 50.000 9.89 9.89 37.53 3.16
42 43 2.164624 GCTAGACACACCATCGAGAAGT 59.835 50.000 0.00 0.00 0.00 3.01
43 44 2.164422 TGCTAGACACACCATCGAGAAG 59.836 50.000 0.00 0.00 0.00 2.85
44 45 2.167662 TGCTAGACACACCATCGAGAA 58.832 47.619 0.00 0.00 0.00 2.87
45 46 1.834188 TGCTAGACACACCATCGAGA 58.166 50.000 0.00 0.00 0.00 4.04
46 47 2.879002 ATGCTAGACACACCATCGAG 57.121 50.000 0.00 0.00 0.00 4.04
47 48 4.556699 CGATAATGCTAGACACACCATCGA 60.557 45.833 0.00 0.00 36.73 3.59
48 49 3.670523 CGATAATGCTAGACACACCATCG 59.329 47.826 0.00 0.00 31.73 3.84
49 50 3.990469 CCGATAATGCTAGACACACCATC 59.010 47.826 0.00 0.00 0.00 3.51
50 51 3.388024 ACCGATAATGCTAGACACACCAT 59.612 43.478 0.00 0.00 0.00 3.55
51 52 2.764010 ACCGATAATGCTAGACACACCA 59.236 45.455 0.00 0.00 0.00 4.17
52 53 3.123804 CACCGATAATGCTAGACACACC 58.876 50.000 0.00 0.00 0.00 4.16
53 54 3.123804 CCACCGATAATGCTAGACACAC 58.876 50.000 0.00 0.00 0.00 3.82
54 55 3.028130 TCCACCGATAATGCTAGACACA 58.972 45.455 0.00 0.00 0.00 3.72
55 56 3.381949 GTCCACCGATAATGCTAGACAC 58.618 50.000 0.00 0.00 0.00 3.67
56 57 2.034179 CGTCCACCGATAATGCTAGACA 59.966 50.000 0.00 0.00 39.56 3.41
57 58 2.034305 ACGTCCACCGATAATGCTAGAC 59.966 50.000 0.00 0.00 40.70 2.59
58 59 2.034179 CACGTCCACCGATAATGCTAGA 59.966 50.000 0.00 0.00 40.70 2.43
59 60 2.394708 CACGTCCACCGATAATGCTAG 58.605 52.381 0.00 0.00 40.70 3.42
60 61 1.537348 GCACGTCCACCGATAATGCTA 60.537 52.381 0.00 0.00 40.70 3.49
61 62 0.810031 GCACGTCCACCGATAATGCT 60.810 55.000 0.00 0.00 40.70 3.79
62 63 1.087202 TGCACGTCCACCGATAATGC 61.087 55.000 0.00 0.00 40.70 3.56
63 64 1.364721 TTGCACGTCCACCGATAATG 58.635 50.000 0.00 0.00 40.70 1.90
64 65 2.006888 CTTTGCACGTCCACCGATAAT 58.993 47.619 0.00 0.00 40.70 1.28
65 66 1.001068 TCTTTGCACGTCCACCGATAA 59.999 47.619 0.00 0.00 40.70 1.75
66 67 0.604073 TCTTTGCACGTCCACCGATA 59.396 50.000 0.00 0.00 40.70 2.92
67 68 0.036388 ATCTTTGCACGTCCACCGAT 60.036 50.000 0.00 0.00 40.70 4.18
68 69 0.250124 AATCTTTGCACGTCCACCGA 60.250 50.000 0.00 0.00 40.70 4.69
69 70 0.591170 AAATCTTTGCACGTCCACCG 59.409 50.000 0.00 0.00 44.03 4.94
70 71 1.336755 ACAAATCTTTGCACGTCCACC 59.663 47.619 2.63 0.00 41.79 4.61
71 72 2.223479 ACACAAATCTTTGCACGTCCAC 60.223 45.455 2.63 0.00 41.79 4.02
72 73 2.020720 ACACAAATCTTTGCACGTCCA 58.979 42.857 2.63 0.00 41.79 4.02
73 74 2.604614 GGACACAAATCTTTGCACGTCC 60.605 50.000 16.92 16.92 42.62 4.79
74 75 2.032799 TGGACACAAATCTTTGCACGTC 59.967 45.455 2.63 7.10 41.79 4.34
75 76 2.020720 TGGACACAAATCTTTGCACGT 58.979 42.857 2.63 0.00 41.79 4.49
76 77 2.653890 CTGGACACAAATCTTTGCACG 58.346 47.619 2.63 0.00 41.79 5.34
77 78 2.397549 GCTGGACACAAATCTTTGCAC 58.602 47.619 2.63 0.00 41.79 4.57
78 79 1.001487 CGCTGGACACAAATCTTTGCA 60.001 47.619 2.63 0.00 41.79 4.08
79 80 1.266718 TCGCTGGACACAAATCTTTGC 59.733 47.619 2.63 0.00 41.79 3.68
80 81 3.624326 TTCGCTGGACACAAATCTTTG 57.376 42.857 1.19 1.19 43.62 2.77
81 82 4.074970 AGATTCGCTGGACACAAATCTTT 58.925 39.130 0.00 0.00 33.96 2.52
82 83 3.438087 CAGATTCGCTGGACACAAATCTT 59.562 43.478 0.00 0.00 41.07 2.40
83 84 3.005554 CAGATTCGCTGGACACAAATCT 58.994 45.455 0.00 0.00 41.07 2.40
84 85 2.476854 GCAGATTCGCTGGACACAAATC 60.477 50.000 0.00 0.00 45.03 2.17
85 86 1.470098 GCAGATTCGCTGGACACAAAT 59.530 47.619 0.00 0.00 45.03 2.32
86 87 0.874390 GCAGATTCGCTGGACACAAA 59.126 50.000 0.00 0.00 45.03 2.83
87 88 0.955428 GGCAGATTCGCTGGACACAA 60.955 55.000 0.00 0.00 45.03 3.33
88 89 1.375908 GGCAGATTCGCTGGACACA 60.376 57.895 0.00 0.00 45.03 3.72
89 90 2.456119 CGGCAGATTCGCTGGACAC 61.456 63.158 0.00 0.00 45.03 3.67
90 91 2.125552 CGGCAGATTCGCTGGACA 60.126 61.111 0.00 0.00 45.03 4.02
91 92 1.741770 AACGGCAGATTCGCTGGAC 60.742 57.895 11.95 0.00 45.03 4.02
92 93 1.741401 CAACGGCAGATTCGCTGGA 60.741 57.895 11.95 0.00 45.03 3.86
93 94 2.753966 CCAACGGCAGATTCGCTGG 61.754 63.158 11.95 0.00 45.03 4.85
95 96 2.034879 CACCAACGGCAGATTCGCT 61.035 57.895 0.00 0.00 0.00 4.93
96 97 2.480555 CACCAACGGCAGATTCGC 59.519 61.111 0.00 0.00 0.00 4.70
97 98 0.744414 ATCCACCAACGGCAGATTCG 60.744 55.000 0.00 0.00 0.00 3.34
98 99 1.463674 AATCCACCAACGGCAGATTC 58.536 50.000 0.00 0.00 0.00 2.52
99 100 1.545582 CAAATCCACCAACGGCAGATT 59.454 47.619 0.00 0.00 31.73 2.40
100 101 1.176527 CAAATCCACCAACGGCAGAT 58.823 50.000 0.00 0.00 0.00 2.90
101 102 1.523154 GCAAATCCACCAACGGCAGA 61.523 55.000 0.00 0.00 0.00 4.26
102 103 1.080569 GCAAATCCACCAACGGCAG 60.081 57.895 0.00 0.00 0.00 4.85
103 104 1.523154 GAGCAAATCCACCAACGGCA 61.523 55.000 0.00 0.00 0.00 5.69
104 105 1.212751 GAGCAAATCCACCAACGGC 59.787 57.895 0.00 0.00 0.00 5.68
105 106 1.501741 CGAGCAAATCCACCAACGG 59.498 57.895 0.00 0.00 0.00 4.44
106 107 0.953471 TCCGAGCAAATCCACCAACG 60.953 55.000 0.00 0.00 0.00 4.10
107 108 1.401905 GATCCGAGCAAATCCACCAAC 59.598 52.381 0.00 0.00 0.00 3.77
108 109 1.281867 AGATCCGAGCAAATCCACCAA 59.718 47.619 0.00 0.00 0.00 3.67
109 110 0.911769 AGATCCGAGCAAATCCACCA 59.088 50.000 0.00 0.00 0.00 4.17
110 111 1.134401 TCAGATCCGAGCAAATCCACC 60.134 52.381 0.00 0.00 0.00 4.61
111 112 2.315925 TCAGATCCGAGCAAATCCAC 57.684 50.000 0.00 0.00 0.00 4.02
112 113 3.208594 CAATCAGATCCGAGCAAATCCA 58.791 45.455 0.00 0.00 0.00 3.41
113 114 3.209410 ACAATCAGATCCGAGCAAATCC 58.791 45.455 0.00 0.00 0.00 3.01
114 115 5.053145 ACTACAATCAGATCCGAGCAAATC 58.947 41.667 0.00 0.00 0.00 2.17
115 116 5.028549 ACTACAATCAGATCCGAGCAAAT 57.971 39.130 0.00 0.00 0.00 2.32
116 117 4.471904 ACTACAATCAGATCCGAGCAAA 57.528 40.909 0.00 0.00 0.00 3.68
117 118 4.433615 GAACTACAATCAGATCCGAGCAA 58.566 43.478 0.00 0.00 0.00 3.91
118 119 3.489229 CGAACTACAATCAGATCCGAGCA 60.489 47.826 0.00 0.00 0.00 4.26
119 120 3.046390 CGAACTACAATCAGATCCGAGC 58.954 50.000 0.00 0.00 0.00 5.03
120 121 4.035792 AGACGAACTACAATCAGATCCGAG 59.964 45.833 0.00 0.00 0.00 4.63
121 122 3.945921 AGACGAACTACAATCAGATCCGA 59.054 43.478 0.00 0.00 0.00 4.55
122 123 4.294416 AGACGAACTACAATCAGATCCG 57.706 45.455 0.00 0.00 0.00 4.18
123 124 8.649973 AATTTAGACGAACTACAATCAGATCC 57.350 34.615 0.00 0.00 0.00 3.36
124 125 9.302345 TGAATTTAGACGAACTACAATCAGATC 57.698 33.333 0.00 0.00 0.00 2.75
125 126 9.823647 ATGAATTTAGACGAACTACAATCAGAT 57.176 29.630 0.00 0.00 0.00 2.90
126 127 9.087424 CATGAATTTAGACGAACTACAATCAGA 57.913 33.333 0.00 0.00 0.00 3.27
127 128 8.873830 ACATGAATTTAGACGAACTACAATCAG 58.126 33.333 0.00 0.00 0.00 2.90
128 129 8.655970 CACATGAATTTAGACGAACTACAATCA 58.344 33.333 0.00 0.00 0.00 2.57
129 130 8.656849 ACACATGAATTTAGACGAACTACAATC 58.343 33.333 0.00 0.00 0.00 2.67
130 131 8.547967 ACACATGAATTTAGACGAACTACAAT 57.452 30.769 0.00 0.00 0.00 2.71
131 132 7.956420 ACACATGAATTTAGACGAACTACAA 57.044 32.000 0.00 0.00 0.00 2.41
132 133 7.956420 AACACATGAATTTAGACGAACTACA 57.044 32.000 0.00 0.00 0.00 2.74
133 134 9.659830 AAAAACACATGAATTTAGACGAACTAC 57.340 29.630 0.00 0.00 0.00 2.73
135 136 9.878599 CTAAAAACACATGAATTTAGACGAACT 57.121 29.630 0.00 0.00 37.48 3.01
136 137 9.113876 CCTAAAAACACATGAATTTAGACGAAC 57.886 33.333 17.55 0.00 37.48 3.95
137 138 8.842280 ACCTAAAAACACATGAATTTAGACGAA 58.158 29.630 17.55 0.00 37.48 3.85
138 139 8.385898 ACCTAAAAACACATGAATTTAGACGA 57.614 30.769 17.55 0.00 37.48 4.20
139 140 8.901748 CAACCTAAAAACACATGAATTTAGACG 58.098 33.333 17.55 9.84 37.48 4.18
140 141 9.191995 CCAACCTAAAAACACATGAATTTAGAC 57.808 33.333 17.55 0.00 37.48 2.59
141 142 9.137459 TCCAACCTAAAAACACATGAATTTAGA 57.863 29.630 17.55 4.31 37.48 2.10
142 143 9.927668 ATCCAACCTAAAAACACATGAATTTAG 57.072 29.630 0.00 8.22 35.90 1.85
143 144 9.921637 GATCCAACCTAAAAACACATGAATTTA 57.078 29.630 0.00 0.00 0.00 1.40
144 145 8.650490 AGATCCAACCTAAAAACACATGAATTT 58.350 29.630 0.00 0.00 0.00 1.82
145 146 8.193953 AGATCCAACCTAAAAACACATGAATT 57.806 30.769 0.00 0.00 0.00 2.17
146 147 7.781324 AGATCCAACCTAAAAACACATGAAT 57.219 32.000 0.00 0.00 0.00 2.57
147 148 7.595819 AAGATCCAACCTAAAAACACATGAA 57.404 32.000 0.00 0.00 0.00 2.57
148 149 7.595819 AAAGATCCAACCTAAAAACACATGA 57.404 32.000 0.00 0.00 0.00 3.07
149 150 7.114811 CGAAAAGATCCAACCTAAAAACACATG 59.885 37.037 0.00 0.00 0.00 3.21
150 151 7.013846 TCGAAAAGATCCAACCTAAAAACACAT 59.986 33.333 0.00 0.00 0.00 3.21
151 152 6.319152 TCGAAAAGATCCAACCTAAAAACACA 59.681 34.615 0.00 0.00 0.00 3.72
152 153 6.731164 TCGAAAAGATCCAACCTAAAAACAC 58.269 36.000 0.00 0.00 0.00 3.32
153 154 6.945938 TCGAAAAGATCCAACCTAAAAACA 57.054 33.333 0.00 0.00 0.00 2.83
167 168 7.033791 TGAAAAGTAGCGTAGATCGAAAAGAT 58.966 34.615 0.00 0.00 43.51 2.40
168 169 6.384224 TGAAAAGTAGCGTAGATCGAAAAGA 58.616 36.000 0.00 0.00 42.86 2.52
169 170 6.627690 TGAAAAGTAGCGTAGATCGAAAAG 57.372 37.500 0.00 0.00 42.86 2.27
170 171 6.020916 CGATGAAAAGTAGCGTAGATCGAAAA 60.021 38.462 0.00 0.00 42.86 2.29
171 172 5.454554 CGATGAAAAGTAGCGTAGATCGAAA 59.545 40.000 0.00 0.00 42.86 3.46
172 173 4.968181 CGATGAAAAGTAGCGTAGATCGAA 59.032 41.667 0.00 0.00 42.86 3.71
173 174 4.271776 TCGATGAAAAGTAGCGTAGATCGA 59.728 41.667 0.00 0.00 42.86 3.59
174 175 4.376279 GTCGATGAAAAGTAGCGTAGATCG 59.624 45.833 0.00 0.00 43.12 3.69
175 176 4.376279 CGTCGATGAAAAGTAGCGTAGATC 59.624 45.833 0.00 0.00 0.00 2.75
176 177 4.280461 CGTCGATGAAAAGTAGCGTAGAT 58.720 43.478 0.00 0.00 0.00 1.98
177 178 3.486375 CCGTCGATGAAAAGTAGCGTAGA 60.486 47.826 6.11 0.00 0.00 2.59
178 179 2.782192 CCGTCGATGAAAAGTAGCGTAG 59.218 50.000 6.11 0.00 0.00 3.51
179 180 2.789208 CCGTCGATGAAAAGTAGCGTA 58.211 47.619 6.11 0.00 0.00 4.42
180 181 1.625616 CCGTCGATGAAAAGTAGCGT 58.374 50.000 6.11 0.00 0.00 5.07
181 182 0.297820 GCCGTCGATGAAAAGTAGCG 59.702 55.000 6.11 0.00 0.00 4.26
182 183 0.297820 CGCCGTCGATGAAAAGTAGC 59.702 55.000 6.11 0.00 38.10 3.58
183 184 0.921347 CCGCCGTCGATGAAAAGTAG 59.079 55.000 6.11 0.00 38.10 2.57
184 185 0.244450 ACCGCCGTCGATGAAAAGTA 59.756 50.000 6.11 0.00 38.10 2.24
185 186 0.601841 AACCGCCGTCGATGAAAAGT 60.602 50.000 6.11 0.00 38.10 2.66
186 187 0.179225 CAACCGCCGTCGATGAAAAG 60.179 55.000 6.11 0.00 38.10 2.27
187 188 1.863491 CAACCGCCGTCGATGAAAA 59.137 52.632 6.11 0.00 38.10 2.29
188 189 2.673114 GCAACCGCCGTCGATGAAA 61.673 57.895 6.11 0.00 38.10 2.69
189 190 2.215465 TAGCAACCGCCGTCGATGAA 62.215 55.000 6.11 0.00 39.83 2.57
190 191 2.011741 ATAGCAACCGCCGTCGATGA 62.012 55.000 6.11 0.00 39.83 2.92
191 192 1.548973 GATAGCAACCGCCGTCGATG 61.549 60.000 0.00 0.00 39.83 3.84
192 193 1.299926 GATAGCAACCGCCGTCGAT 60.300 57.895 0.00 0.00 39.83 3.59
193 194 2.103538 GATAGCAACCGCCGTCGA 59.896 61.111 0.00 0.00 39.83 4.20
194 195 2.104331 AGATAGCAACCGCCGTCG 59.896 61.111 0.00 0.00 39.83 5.12
195 196 2.526120 GCAGATAGCAACCGCCGTC 61.526 63.158 0.00 0.00 44.79 4.79
196 197 2.511600 GCAGATAGCAACCGCCGT 60.512 61.111 0.00 0.00 44.79 5.68
205 206 0.177604 AGACCAGCACAGCAGATAGC 59.822 55.000 0.00 0.00 46.19 2.97
206 207 3.452474 GTTAGACCAGCACAGCAGATAG 58.548 50.000 0.00 0.00 0.00 2.08
207 208 2.159240 CGTTAGACCAGCACAGCAGATA 60.159 50.000 0.00 0.00 0.00 1.98
208 209 1.404717 CGTTAGACCAGCACAGCAGAT 60.405 52.381 0.00 0.00 0.00 2.90
209 210 0.038251 CGTTAGACCAGCACAGCAGA 60.038 55.000 0.00 0.00 0.00 4.26
210 211 1.016130 CCGTTAGACCAGCACAGCAG 61.016 60.000 0.00 0.00 0.00 4.24
211 212 1.005037 CCGTTAGACCAGCACAGCA 60.005 57.895 0.00 0.00 0.00 4.41
212 213 2.391389 GCCGTTAGACCAGCACAGC 61.391 63.158 0.00 0.00 0.00 4.40
213 214 2.094659 CGCCGTTAGACCAGCACAG 61.095 63.158 0.00 0.00 0.00 3.66
214 215 1.884075 ATCGCCGTTAGACCAGCACA 61.884 55.000 0.00 0.00 0.00 4.57
215 216 0.739813 AATCGCCGTTAGACCAGCAC 60.740 55.000 0.00 0.00 0.00 4.40
216 217 0.739462 CAATCGCCGTTAGACCAGCA 60.739 55.000 0.00 0.00 0.00 4.41
217 218 2.006772 CAATCGCCGTTAGACCAGC 58.993 57.895 0.00 0.00 0.00 4.85
218 219 0.460284 AGCAATCGCCGTTAGACCAG 60.460 55.000 0.00 0.00 39.83 4.00
219 220 0.739462 CAGCAATCGCCGTTAGACCA 60.739 55.000 0.00 0.00 39.83 4.02
220 221 0.739813 ACAGCAATCGCCGTTAGACC 60.740 55.000 0.00 0.00 39.83 3.85
221 222 1.060698 GAACAGCAATCGCCGTTAGAC 59.939 52.381 0.00 0.00 38.87 2.59
222 223 1.067142 AGAACAGCAATCGCCGTTAGA 60.067 47.619 0.00 0.00 38.87 2.10
223 224 1.061131 CAGAACAGCAATCGCCGTTAG 59.939 52.381 0.00 0.00 38.87 2.34
224 225 1.075542 CAGAACAGCAATCGCCGTTA 58.924 50.000 0.00 0.00 38.87 3.18
225 226 1.868997 CAGAACAGCAATCGCCGTT 59.131 52.632 0.00 0.00 41.48 4.44
226 227 2.680913 GCAGAACAGCAATCGCCGT 61.681 57.895 0.00 0.00 39.83 5.68
227 228 2.099062 GCAGAACAGCAATCGCCG 59.901 61.111 0.00 0.00 39.83 6.46
228 229 1.136147 CAGCAGAACAGCAATCGCC 59.864 57.895 0.00 0.00 39.83 5.54
229 230 1.513586 GCAGCAGAACAGCAATCGC 60.514 57.895 0.00 0.00 36.85 4.58
230 231 1.225936 CGCAGCAGAACAGCAATCG 60.226 57.895 0.00 0.00 36.85 3.34
231 232 4.759564 CGCAGCAGAACAGCAATC 57.240 55.556 0.00 0.00 36.85 2.67
244 245 1.068753 CCTCATAGGACCAGCGCAG 59.931 63.158 11.47 0.00 37.67 5.18
245 246 1.676678 GACCTCATAGGACCAGCGCA 61.677 60.000 11.47 0.00 37.67 6.09
246 247 1.068250 GACCTCATAGGACCAGCGC 59.932 63.158 0.00 0.00 37.67 5.92
247 248 1.115467 AAGACCTCATAGGACCAGCG 58.885 55.000 0.00 0.00 37.67 5.18
248 249 2.036604 GCTAAGACCTCATAGGACCAGC 59.963 54.545 0.00 2.44 37.67 4.85
249 250 3.068873 GTGCTAAGACCTCATAGGACCAG 59.931 52.174 0.00 0.00 37.67 4.00
250 251 3.031736 GTGCTAAGACCTCATAGGACCA 58.968 50.000 0.00 0.00 37.67 4.02
251 252 3.031736 TGTGCTAAGACCTCATAGGACC 58.968 50.000 0.00 0.00 37.58 4.46
252 253 4.434520 GTTGTGCTAAGACCTCATAGGAC 58.565 47.826 0.00 3.12 37.67 3.85
253 254 3.130516 CGTTGTGCTAAGACCTCATAGGA 59.869 47.826 0.00 0.00 37.67 2.94
254 255 3.130516 TCGTTGTGCTAAGACCTCATAGG 59.869 47.826 0.00 0.00 42.49 2.57
255 256 4.106197 GTCGTTGTGCTAAGACCTCATAG 58.894 47.826 0.00 0.00 0.00 2.23
256 257 3.762288 AGTCGTTGTGCTAAGACCTCATA 59.238 43.478 0.00 0.00 34.41 2.15
257 258 2.563179 AGTCGTTGTGCTAAGACCTCAT 59.437 45.455 0.00 0.00 34.41 2.90
258 259 1.961394 AGTCGTTGTGCTAAGACCTCA 59.039 47.619 0.00 0.00 34.41 3.86
259 260 2.726832 AGTCGTTGTGCTAAGACCTC 57.273 50.000 0.00 0.00 34.41 3.85
260 261 2.288886 GGAAGTCGTTGTGCTAAGACCT 60.289 50.000 0.00 0.00 34.41 3.85
261 262 2.067013 GGAAGTCGTTGTGCTAAGACC 58.933 52.381 0.00 0.00 34.41 3.85
262 263 1.719780 CGGAAGTCGTTGTGCTAAGAC 59.280 52.381 0.00 0.00 0.00 3.01
263 264 1.610038 TCGGAAGTCGTTGTGCTAAGA 59.390 47.619 0.00 0.00 40.32 2.10
264 265 1.719780 GTCGGAAGTCGTTGTGCTAAG 59.280 52.381 0.00 0.00 40.32 2.18
265 266 1.338973 AGTCGGAAGTCGTTGTGCTAA 59.661 47.619 0.00 0.00 40.32 3.09
266 267 0.956633 AGTCGGAAGTCGTTGTGCTA 59.043 50.000 0.00 0.00 40.32 3.49
267 268 0.597637 CAGTCGGAAGTCGTTGTGCT 60.598 55.000 0.00 0.00 40.32 4.40
268 269 0.874607 ACAGTCGGAAGTCGTTGTGC 60.875 55.000 0.00 0.00 40.32 4.57
269 270 1.129326 GACAGTCGGAAGTCGTTGTG 58.871 55.000 0.00 0.00 37.67 3.33
270 271 1.030457 AGACAGTCGGAAGTCGTTGT 58.970 50.000 0.00 0.00 39.67 3.32
271 272 2.225963 AGTAGACAGTCGGAAGTCGTTG 59.774 50.000 0.00 0.00 39.67 4.10
272 273 2.502295 AGTAGACAGTCGGAAGTCGTT 58.498 47.619 0.00 0.00 39.67 3.85
273 274 2.181954 AGTAGACAGTCGGAAGTCGT 57.818 50.000 0.00 0.00 39.67 4.34
274 275 5.277250 GGTTATAGTAGACAGTCGGAAGTCG 60.277 48.000 0.00 0.00 39.67 4.18
275 276 5.587844 TGGTTATAGTAGACAGTCGGAAGTC 59.412 44.000 0.00 4.23 35.02 3.01
276 277 5.503927 TGGTTATAGTAGACAGTCGGAAGT 58.496 41.667 0.00 0.00 0.00 3.01
277 278 5.589452 ACTGGTTATAGTAGACAGTCGGAAG 59.411 44.000 0.00 0.00 37.86 3.46
278 279 5.503927 ACTGGTTATAGTAGACAGTCGGAA 58.496 41.667 0.00 0.00 37.86 4.30
279 280 5.108187 ACTGGTTATAGTAGACAGTCGGA 57.892 43.478 0.00 0.00 37.86 4.55
280 281 5.421212 GACTGGTTATAGTAGACAGTCGG 57.579 47.826 7.28 0.00 45.58 4.79
283 284 5.127356 GGCAAGACTGGTTATAGTAGACAGT 59.873 44.000 0.00 0.00 44.34 3.55
284 285 5.452077 GGGCAAGACTGGTTATAGTAGACAG 60.452 48.000 0.00 0.00 35.40 3.51
285 286 4.404715 GGGCAAGACTGGTTATAGTAGACA 59.595 45.833 0.00 0.00 0.00 3.41
286 287 4.499357 CGGGCAAGACTGGTTATAGTAGAC 60.499 50.000 0.00 0.00 0.00 2.59
287 288 3.635373 CGGGCAAGACTGGTTATAGTAGA 59.365 47.826 0.00 0.00 0.00 2.59
288 289 3.243771 CCGGGCAAGACTGGTTATAGTAG 60.244 52.174 0.00 0.00 32.00 2.57
289 290 2.696707 CCGGGCAAGACTGGTTATAGTA 59.303 50.000 0.00 0.00 32.00 1.82
290 291 1.485066 CCGGGCAAGACTGGTTATAGT 59.515 52.381 0.00 0.00 32.00 2.12
291 292 1.810412 GCCGGGCAAGACTGGTTATAG 60.810 57.143 15.62 0.00 39.19 1.31
292 293 0.179468 GCCGGGCAAGACTGGTTATA 59.821 55.000 15.62 0.00 39.19 0.98
293 294 1.077716 GCCGGGCAAGACTGGTTAT 60.078 57.895 15.62 0.00 39.19 1.89
294 295 2.180159 GAGCCGGGCAAGACTGGTTA 62.180 60.000 23.09 0.00 39.19 2.85
295 296 3.553095 GAGCCGGGCAAGACTGGTT 62.553 63.158 23.09 0.00 39.19 3.67
296 297 4.021925 GAGCCGGGCAAGACTGGT 62.022 66.667 23.09 0.00 39.19 4.00
297 298 4.785453 GGAGCCGGGCAAGACTGG 62.785 72.222 23.09 0.00 40.00 4.00
314 315 3.470888 ATTGCCCCTCCCTCGTCG 61.471 66.667 0.00 0.00 0.00 5.12
315 316 2.190578 CATTGCCCCTCCCTCGTC 59.809 66.667 0.00 0.00 0.00 4.20
316 317 2.285368 TCATTGCCCCTCCCTCGT 60.285 61.111 0.00 0.00 0.00 4.18
317 318 2.190578 GTCATTGCCCCTCCCTCG 59.809 66.667 0.00 0.00 0.00 4.63
318 319 2.190578 CGTCATTGCCCCTCCCTC 59.809 66.667 0.00 0.00 0.00 4.30
319 320 2.285368 TCGTCATTGCCCCTCCCT 60.285 61.111 0.00 0.00 0.00 4.20
320 321 2.124695 GTCGTCATTGCCCCTCCC 60.125 66.667 0.00 0.00 0.00 4.30
321 322 2.511600 CGTCGTCATTGCCCCTCC 60.512 66.667 0.00 0.00 0.00 4.30
322 323 1.810030 GACGTCGTCATTGCCCCTC 60.810 63.158 20.28 0.00 32.09 4.30
323 324 2.264794 GACGTCGTCATTGCCCCT 59.735 61.111 20.28 0.00 32.09 4.79
324 325 3.186047 CGACGTCGTCATTGCCCC 61.186 66.667 29.08 0.00 32.09 5.80
345 346 1.446907 AGCATTGAAGTGAGCCGAAG 58.553 50.000 0.00 0.00 0.00 3.79
346 347 1.896220 AAGCATTGAAGTGAGCCGAA 58.104 45.000 0.00 0.00 0.00 4.30
347 348 2.760634 TAAGCATTGAAGTGAGCCGA 57.239 45.000 0.00 0.00 0.00 5.54
348 349 4.122776 ACTATAAGCATTGAAGTGAGCCG 58.877 43.478 0.00 0.00 0.00 5.52
349 350 4.210120 CGACTATAAGCATTGAAGTGAGCC 59.790 45.833 0.00 0.00 0.00 4.70
350 351 4.806247 ACGACTATAAGCATTGAAGTGAGC 59.194 41.667 0.00 0.00 0.00 4.26
351 352 5.172232 CGACGACTATAAGCATTGAAGTGAG 59.828 44.000 0.00 0.00 0.00 3.51
352 353 5.034797 CGACGACTATAAGCATTGAAGTGA 58.965 41.667 0.00 0.00 0.00 3.41
353 354 4.317418 GCGACGACTATAAGCATTGAAGTG 60.317 45.833 0.00 0.00 0.00 3.16
354 355 3.797256 GCGACGACTATAAGCATTGAAGT 59.203 43.478 0.00 0.00 0.00 3.01
355 356 4.045104 AGCGACGACTATAAGCATTGAAG 58.955 43.478 0.00 0.00 0.00 3.02
356 357 4.041740 AGCGACGACTATAAGCATTGAA 57.958 40.909 0.00 0.00 0.00 2.69
357 358 3.710326 AGCGACGACTATAAGCATTGA 57.290 42.857 0.00 0.00 0.00 2.57
358 359 4.784329 TCTAGCGACGACTATAAGCATTG 58.216 43.478 0.00 0.00 0.00 2.82
359 360 5.394802 CATCTAGCGACGACTATAAGCATT 58.605 41.667 0.00 0.00 0.00 3.56
360 361 4.142578 CCATCTAGCGACGACTATAAGCAT 60.143 45.833 0.00 0.00 0.00 3.79
361 362 3.188667 CCATCTAGCGACGACTATAAGCA 59.811 47.826 0.00 0.00 0.00 3.91
362 363 3.188873 ACCATCTAGCGACGACTATAAGC 59.811 47.826 0.00 0.00 0.00 3.09
363 364 4.691685 AGACCATCTAGCGACGACTATAAG 59.308 45.833 0.00 0.00 0.00 1.73
364 365 4.639334 AGACCATCTAGCGACGACTATAA 58.361 43.478 0.00 0.00 0.00 0.98
365 366 4.268797 AGACCATCTAGCGACGACTATA 57.731 45.455 0.00 0.00 0.00 1.31
366 367 3.128852 AGACCATCTAGCGACGACTAT 57.871 47.619 0.00 0.00 0.00 2.12
367 368 2.616634 AGACCATCTAGCGACGACTA 57.383 50.000 0.00 0.00 0.00 2.59
368 369 2.211806 GTAGACCATCTAGCGACGACT 58.788 52.381 0.00 0.00 28.01 4.18
369 370 1.070710 CGTAGACCATCTAGCGACGAC 60.071 57.143 0.00 0.00 29.07 4.34
370 371 1.215244 CGTAGACCATCTAGCGACGA 58.785 55.000 0.00 0.00 29.07 4.20
371 372 0.235144 CCGTAGACCATCTAGCGACG 59.765 60.000 0.00 0.00 30.61 5.12
372 373 1.590932 TCCGTAGACCATCTAGCGAC 58.409 55.000 0.00 0.00 30.61 5.19
373 374 2.038689 AGATCCGTAGACCATCTAGCGA 59.961 50.000 0.00 0.00 30.61 4.93
374 375 2.160615 CAGATCCGTAGACCATCTAGCG 59.839 54.545 0.00 0.00 28.01 4.26
375 376 2.490115 CCAGATCCGTAGACCATCTAGC 59.510 54.545 0.00 0.00 28.01 3.42
376 377 4.022413 TCCAGATCCGTAGACCATCTAG 57.978 50.000 0.00 0.00 28.01 2.43
377 378 4.202577 ACATCCAGATCCGTAGACCATCTA 60.203 45.833 0.00 0.00 0.00 1.98
378 379 3.161067 CATCCAGATCCGTAGACCATCT 58.839 50.000 0.00 0.00 0.00 2.90
379 380 2.894126 ACATCCAGATCCGTAGACCATC 59.106 50.000 0.00 0.00 0.00 3.51
380 381 2.964209 ACATCCAGATCCGTAGACCAT 58.036 47.619 0.00 0.00 0.00 3.55
381 382 2.454336 ACATCCAGATCCGTAGACCA 57.546 50.000 0.00 0.00 0.00 4.02
382 383 5.470047 AATTACATCCAGATCCGTAGACC 57.530 43.478 0.00 0.00 0.00 3.85
383 384 7.787725 AAAAATTACATCCAGATCCGTAGAC 57.212 36.000 0.00 0.00 0.00 2.59
424 425 6.747125 TGCATTTTCAATCACGCCATATAAT 58.253 32.000 0.00 0.00 0.00 1.28
434 435 8.922058 ACTTTGATCTATGCATTTTCAATCAC 57.078 30.769 3.54 0.00 0.00 3.06
445 446 4.201714 CGCGAGAAAACTTTGATCTATGCA 60.202 41.667 0.00 0.00 0.00 3.96
446 447 4.266945 CGCGAGAAAACTTTGATCTATGC 58.733 43.478 0.00 0.00 0.00 3.14
447 448 4.201714 TGCGCGAGAAAACTTTGATCTATG 60.202 41.667 12.10 0.00 0.00 2.23
448 449 3.932710 TGCGCGAGAAAACTTTGATCTAT 59.067 39.130 12.10 0.00 0.00 1.98
449 450 3.322369 TGCGCGAGAAAACTTTGATCTA 58.678 40.909 12.10 0.00 0.00 1.98
451 452 2.594529 TGCGCGAGAAAACTTTGATC 57.405 45.000 12.10 0.00 0.00 2.92
453 454 4.475763 TTATTGCGCGAGAAAACTTTGA 57.524 36.364 12.10 0.00 28.11 2.69
454 455 5.553692 TTTTATTGCGCGAGAAAACTTTG 57.446 34.783 22.84 0.00 28.11 2.77
563 566 1.616628 AGGGAACGGCCTGGAAGAT 60.617 57.895 0.00 0.00 34.07 2.40
589 595 1.682684 CGGGACAGGACAGGCTACT 60.683 63.158 0.00 0.00 0.00 2.57
591 597 1.229082 AACGGGACAGGACAGGCTA 60.229 57.895 0.00 0.00 0.00 3.93
649 655 1.071299 CCAAAGGGCAAAAGTGGGC 59.929 57.895 0.00 0.00 0.00 5.36
937 950 2.054453 GGGAGTTGATGCCAAGGCC 61.054 63.158 8.89 0.00 39.77 5.19
1323 1339 0.456312 GAGTTACCTCGGTGAGCGTG 60.456 60.000 3.30 0.75 0.00 5.34
1382 1398 1.562783 ACTAGGGGTCAAGTGAGAGC 58.437 55.000 0.00 0.00 35.36 4.09
1383 1399 3.835395 AGAAACTAGGGGTCAAGTGAGAG 59.165 47.826 0.00 0.00 0.00 3.20
1549 1565 3.864003 GGAGTAGCTCGGTTGAATTGTAC 59.136 47.826 0.00 0.00 0.00 2.90
1585 1605 3.308866 CGGACCGCCTAAATTAAGACAAG 59.691 47.826 0.00 0.00 0.00 3.16
1603 1628 2.504244 CGCCAGTTCGTCTCGGAC 60.504 66.667 0.00 0.00 35.29 4.79
1673 1699 7.013655 CCATTCTTGCTGCTACATAAACCTATT 59.986 37.037 0.00 0.00 0.00 1.73
1809 1835 1.312815 GTGCCTGTTCTTTCAGCTGT 58.687 50.000 14.67 0.00 34.47 4.40
1963 1994 7.147069 ACTGGACTGGGGTACTACAATAGTATA 60.147 40.741 0.00 0.00 42.68 1.47
1964 1995 6.034442 TGGACTGGGGTACTACAATAGTAT 57.966 41.667 0.00 0.00 42.68 2.12
2014 2051 3.131396 GACTTGTGTTTCCGATGACTGT 58.869 45.455 0.00 0.00 0.00 3.55
2193 2236 2.093288 TCTTGGGCATGAGCAGTAGAAG 60.093 50.000 0.00 0.00 44.61 2.85
2222 2267 1.628846 AGAAGGGCCACAAATACGTCT 59.371 47.619 6.18 0.00 0.00 4.18
2223 2268 2.109425 AGAAGGGCCACAAATACGTC 57.891 50.000 6.18 0.00 0.00 4.34
2224 2269 2.159382 CAAGAAGGGCCACAAATACGT 58.841 47.619 6.18 0.00 0.00 3.57
2225 2270 2.159382 ACAAGAAGGGCCACAAATACG 58.841 47.619 6.18 0.00 0.00 3.06
2226 2271 3.860754 GCAACAAGAAGGGCCACAAATAC 60.861 47.826 6.18 0.00 0.00 1.89
2227 2272 2.298729 GCAACAAGAAGGGCCACAAATA 59.701 45.455 6.18 0.00 0.00 1.40
2228 2273 1.070601 GCAACAAGAAGGGCCACAAAT 59.929 47.619 6.18 0.00 0.00 2.32
2229 2274 0.463620 GCAACAAGAAGGGCCACAAA 59.536 50.000 6.18 0.00 0.00 2.83
2230 2275 0.685785 TGCAACAAGAAGGGCCACAA 60.686 50.000 6.18 0.00 0.00 3.33
2231 2276 0.685785 TTGCAACAAGAAGGGCCACA 60.686 50.000 6.18 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.