Multiple sequence alignment - TraesCS5D01G133100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G133100 chr5D 100.000 3685 0 0 1 3685 212451826 212455510 0.000000e+00 6806.0
1 TraesCS5D01G133100 chr5D 91.786 280 13 3 532 802 29154134 29153856 7.470000e-102 381.0
2 TraesCS5D01G133100 chr5D 91.756 279 14 1 532 801 296966305 296966027 2.690000e-101 379.0
3 TraesCS5D01G133100 chr5A 93.880 2157 59 20 797 2903 275649412 275651545 0.000000e+00 3184.0
4 TraesCS5D01G133100 chr5A 90.072 554 29 7 1 536 275648873 275649418 0.000000e+00 695.0
5 TraesCS5D01G133100 chr5A 96.241 266 5 3 3221 3484 275651566 275651828 7.310000e-117 431.0
6 TraesCS5D01G133100 chr5A 96.460 113 3 1 3570 3682 275652466 275652577 6.280000e-43 185.0
7 TraesCS5D01G133100 chr5A 98.925 93 1 0 3480 3572 275652100 275652192 2.280000e-37 167.0
8 TraesCS5D01G133100 chr5B 95.120 1045 24 8 797 1828 226431656 226432686 0.000000e+00 1622.0
9 TraesCS5D01G133100 chr5B 93.464 918 20 8 2005 2903 226433186 226434082 0.000000e+00 1327.0
10 TraesCS5D01G133100 chr5B 96.618 414 8 5 3221 3632 226434104 226434513 0.000000e+00 682.0
11 TraesCS5D01G133100 chr5B 95.769 260 11 0 180 439 226429807 226430066 1.580000e-113 420.0
12 TraesCS5D01G133100 chr5B 91.429 280 15 1 529 799 592738241 592737962 3.470000e-100 375.0
13 TraesCS5D01G133100 chr5B 95.652 184 5 1 1828 2011 226432722 226432902 3.600000e-75 292.0
14 TraesCS5D01G133100 chr5B 92.553 188 7 2 1 181 226429496 226429683 2.820000e-66 263.0
15 TraesCS5D01G133100 chr5B 98.182 55 1 0 3616 3670 226434606 226434660 3.030000e-16 97.1
16 TraesCS5D01G133100 chr3D 92.115 279 13 1 532 801 388809606 388809884 5.770000e-103 385.0
17 TraesCS5D01G133100 chr3D 86.738 279 28 1 532 801 283613393 283613115 5.980000e-78 302.0
18 TraesCS5D01G133100 chr3D 84.407 295 27 2 525 800 63349973 63350267 4.690000e-69 272.0
19 TraesCS5D01G133100 chr3D 89.759 166 15 2 3059 3223 421610334 421610498 1.040000e-50 211.0
20 TraesCS5D01G133100 chr7D 91.418 268 12 2 541 799 32673892 32674157 1.260000e-94 357.0
21 TraesCS5D01G133100 chr7D 91.515 165 11 3 3059 3222 204094121 204093959 1.330000e-54 224.0
22 TraesCS5D01G133100 chr7D 89.881 168 13 3 3059 3224 72560544 72560379 2.880000e-51 213.0
23 TraesCS5D01G133100 chr7D 85.443 158 13 2 534 682 22744499 22744655 4.930000e-34 156.0
24 TraesCS5D01G133100 chr2D 87.234 282 26 3 530 801 543843145 543842864 2.760000e-81 313.0
25 TraesCS5D01G133100 chr2D 86.545 275 28 1 534 799 22500450 22500724 1.000000e-75 294.0
26 TraesCS5D01G133100 chr2D 84.014 294 28 6 527 801 66093086 66092793 7.850000e-67 265.0
27 TraesCS5D01G133100 chr2D 90.244 164 16 0 3059 3222 584253005 584253168 8.020000e-52 215.0
28 TraesCS5D01G133100 chr2D 88.889 171 17 2 3059 3227 197865164 197865334 3.730000e-50 209.0
29 TraesCS5D01G133100 chr1D 86.879 282 28 1 532 804 203866480 203866199 1.290000e-79 307.0
30 TraesCS5D01G133100 chr1D 90.244 164 16 0 3059 3222 488617864 488618027 8.020000e-52 215.0
31 TraesCS5D01G133100 chr1D 90.303 165 13 3 3059 3222 432561644 432561806 2.880000e-51 213.0
32 TraesCS5D01G133100 chr1D 86.713 143 9 6 2920 3054 482146399 482146539 2.290000e-32 150.0
33 TraesCS5D01G133100 chr7A 84.300 293 24 4 531 802 689536094 689535803 2.180000e-67 267.0
34 TraesCS5D01G133100 chr6D 88.506 174 20 0 3059 3232 21819476 21819303 1.040000e-50 211.0
35 TraesCS5D01G133100 chr6D 89.759 166 16 1 3059 3223 463217206 463217371 1.040000e-50 211.0
36 TraesCS5D01G133100 chr3B 84.431 167 18 4 2900 3058 425374768 425374934 1.370000e-34 158.0
37 TraesCS5D01G133100 chr3B 88.889 126 9 1 534 659 732141562 732141682 2.290000e-32 150.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G133100 chr5D 212451826 212455510 3684 False 6806.000000 6806 100.000000 1 3685 1 chr5D.!!$F1 3684
1 TraesCS5D01G133100 chr5A 275648873 275652577 3704 False 932.400000 3184 95.115600 1 3682 5 chr5A.!!$F1 3681
2 TraesCS5D01G133100 chr5B 226429496 226434660 5164 False 671.871429 1622 95.336857 1 3670 7 chr5B.!!$F1 3669

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
20 21 0.824109 TCTCTATGTGGCAACCCTCG 59.176 55.000 0.00 0.0 0.00 4.63 F
614 2265 2.001558 ACTACCTCTACAGTGGGGAGT 58.998 52.381 11.75 4.9 33.22 3.85 F
1978 3712 0.450583 CTGCGCATGCTTCATCAGTT 59.549 50.000 12.24 0.0 43.34 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1482 3151 0.545309 AGGAGCAGTAACAGAGGCCA 60.545 55.0 5.01 0.0 0.0 5.36 R
2302 4331 0.754957 CAAAGTGTCAGGGTGGGCAA 60.755 55.0 0.00 0.0 0.0 4.52 R
2958 5007 0.033894 TGGGACCGGGGCTTATTTTC 60.034 55.0 6.32 0.0 0.0 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 0.824109 TCTCTATGTGGCAACCCTCG 59.176 55.000 0.00 0.00 0.00 4.63
143 150 4.398988 TGACAAGTTGATTGCTTTCACACT 59.601 37.500 10.54 0.00 43.15 3.55
171 179 7.763172 ATGCATGTTTTAACAAAAACTTCGA 57.237 28.000 0.00 0.00 43.03 3.71
316 454 2.414559 GCACAAAATCAGTGATGTCCCG 60.415 50.000 6.34 0.00 39.30 5.14
339 478 5.345741 CGAACAAATCATACTGGCCAAAAAG 59.654 40.000 7.01 0.00 0.00 2.27
420 565 5.748402 AGTATCAAGATTGTGAGATTGCCA 58.252 37.500 0.00 0.00 0.00 4.92
435 580 3.651803 TTGCCACGTTTCCCATTAAAG 57.348 42.857 0.00 0.00 0.00 1.85
463 2114 5.389830 CCACAAAGATACAATCATATCGCCG 60.390 44.000 0.00 0.00 36.78 6.46
468 2119 5.586339 AGATACAATCATATCGCCGATGAG 58.414 41.667 10.41 1.93 36.77 2.90
469 2120 3.667497 ACAATCATATCGCCGATGAGT 57.333 42.857 10.41 0.00 36.77 3.41
470 2121 4.783764 ACAATCATATCGCCGATGAGTA 57.216 40.909 10.41 0.00 36.77 2.59
471 2122 4.486090 ACAATCATATCGCCGATGAGTAC 58.514 43.478 10.41 0.00 36.77 2.73
472 2123 4.218635 ACAATCATATCGCCGATGAGTACT 59.781 41.667 10.41 0.00 36.77 2.73
473 2124 4.624336 ATCATATCGCCGATGAGTACTC 57.376 45.455 16.32 16.32 36.77 2.59
474 2125 2.747989 TCATATCGCCGATGAGTACTCC 59.252 50.000 20.11 4.79 0.00 3.85
499 2150 5.986501 ACTCCAAAACAAACACCAAGTAA 57.013 34.783 0.00 0.00 0.00 2.24
541 2192 6.563222 ACAATCGTATCTCTTAGACTAGCC 57.437 41.667 0.00 0.00 0.00 3.93
542 2193 6.062749 ACAATCGTATCTCTTAGACTAGCCA 58.937 40.000 0.00 0.00 0.00 4.75
543 2194 6.016943 ACAATCGTATCTCTTAGACTAGCCAC 60.017 42.308 0.00 0.00 0.00 5.01
544 2195 5.032327 TCGTATCTCTTAGACTAGCCACA 57.968 43.478 0.00 0.00 0.00 4.17
545 2196 5.434408 TCGTATCTCTTAGACTAGCCACAA 58.566 41.667 0.00 0.00 0.00 3.33
546 2197 6.062749 TCGTATCTCTTAGACTAGCCACAAT 58.937 40.000 0.00 0.00 0.00 2.71
547 2198 6.017026 TCGTATCTCTTAGACTAGCCACAATG 60.017 42.308 0.00 0.00 0.00 2.82
548 2199 5.543507 ATCTCTTAGACTAGCCACAATGG 57.456 43.478 0.00 0.00 41.55 3.16
549 2200 4.610333 TCTCTTAGACTAGCCACAATGGA 58.390 43.478 0.00 0.00 40.96 3.41
550 2201 5.211973 TCTCTTAGACTAGCCACAATGGAT 58.788 41.667 0.00 0.00 40.96 3.41
551 2202 6.373759 TCTCTTAGACTAGCCACAATGGATA 58.626 40.000 0.00 0.00 40.96 2.59
561 2212 6.747414 AGCCACAATGGATAGTAACATAGA 57.253 37.500 0.00 0.00 40.96 1.98
562 2213 6.525629 AGCCACAATGGATAGTAACATAGAC 58.474 40.000 0.00 0.00 40.96 2.59
563 2214 6.327626 AGCCACAATGGATAGTAACATAGACT 59.672 38.462 0.00 0.00 40.96 3.24
564 2215 7.509318 AGCCACAATGGATAGTAACATAGACTA 59.491 37.037 0.00 0.00 40.96 2.59
565 2216 7.815068 GCCACAATGGATAGTAACATAGACTAG 59.185 40.741 0.00 0.00 40.96 2.57
566 2217 8.861086 CCACAATGGATAGTAACATAGACTAGT 58.139 37.037 0.00 0.00 40.96 2.57
576 2227 8.951614 AGTAACATAGACTAGTAATATGGGCA 57.048 34.615 22.39 10.67 32.36 5.36
577 2228 9.548631 AGTAACATAGACTAGTAATATGGGCAT 57.451 33.333 22.39 12.96 32.36 4.40
578 2229 9.587772 GTAACATAGACTAGTAATATGGGCATG 57.412 37.037 22.39 7.79 32.36 4.06
579 2230 7.798710 ACATAGACTAGTAATATGGGCATGT 57.201 36.000 22.39 8.25 32.36 3.21
580 2231 8.207350 ACATAGACTAGTAATATGGGCATGTT 57.793 34.615 22.39 5.98 32.36 2.71
581 2232 9.321532 ACATAGACTAGTAATATGGGCATGTTA 57.678 33.333 22.39 0.00 32.36 2.41
582 2233 9.587772 CATAGACTAGTAATATGGGCATGTTAC 57.412 37.037 15.34 0.00 42.23 2.50
584 2235 8.951614 AGACTAGTAATATGGGCATGTTACTA 57.048 34.615 8.35 8.35 46.68 1.82
588 2239 7.857404 AGTAATATGGGCATGTTACTAGTCT 57.143 36.000 0.00 0.00 46.68 3.24
589 2240 8.951614 AGTAATATGGGCATGTTACTAGTCTA 57.048 34.615 0.00 0.00 46.68 2.59
590 2241 9.548631 AGTAATATGGGCATGTTACTAGTCTAT 57.451 33.333 0.00 0.00 46.68 1.98
591 2242 9.587772 GTAATATGGGCATGTTACTAGTCTATG 57.412 37.037 0.00 4.16 40.21 2.23
592 2243 7.798710 ATATGGGCATGTTACTAGTCTATGT 57.201 36.000 0.00 0.00 0.00 2.29
593 2244 5.950544 TGGGCATGTTACTAGTCTATGTT 57.049 39.130 0.00 0.00 0.00 2.71
594 2245 7.612065 ATGGGCATGTTACTAGTCTATGTTA 57.388 36.000 0.00 0.00 0.00 2.41
595 2246 6.812998 TGGGCATGTTACTAGTCTATGTTAC 58.187 40.000 0.00 0.00 0.00 2.50
596 2247 6.610020 TGGGCATGTTACTAGTCTATGTTACT 59.390 38.462 0.00 0.00 0.00 2.24
597 2248 7.781219 TGGGCATGTTACTAGTCTATGTTACTA 59.219 37.037 0.00 0.00 0.00 1.82
598 2249 8.081025 GGGCATGTTACTAGTCTATGTTACTAC 58.919 40.741 0.00 0.00 0.00 2.73
599 2250 8.081025 GGCATGTTACTAGTCTATGTTACTACC 58.919 40.741 0.00 0.00 0.00 3.18
600 2251 8.848182 GCATGTTACTAGTCTATGTTACTACCT 58.152 37.037 0.00 0.00 0.00 3.08
607 2258 8.991275 ACTAGTCTATGTTACTACCTCTACAGT 58.009 37.037 0.00 0.00 0.00 3.55
608 2259 9.263538 CTAGTCTATGTTACTACCTCTACAGTG 57.736 40.741 0.00 0.00 0.00 3.66
609 2260 7.055378 AGTCTATGTTACTACCTCTACAGTGG 58.945 42.308 0.00 0.00 34.99 4.00
610 2261 6.262720 GTCTATGTTACTACCTCTACAGTGGG 59.737 46.154 0.00 0.00 33.22 4.61
611 2262 3.705051 TGTTACTACCTCTACAGTGGGG 58.295 50.000 0.00 0.00 33.22 4.96
612 2263 3.334581 TGTTACTACCTCTACAGTGGGGA 59.665 47.826 0.00 0.00 33.22 4.81
613 2264 2.830651 ACTACCTCTACAGTGGGGAG 57.169 55.000 0.00 1.36 33.22 4.30
614 2265 2.001558 ACTACCTCTACAGTGGGGAGT 58.998 52.381 11.75 4.90 33.22 3.85
615 2266 3.196300 ACTACCTCTACAGTGGGGAGTA 58.804 50.000 0.00 0.00 31.54 2.59
616 2267 3.595138 ACTACCTCTACAGTGGGGAGTAA 59.405 47.826 0.00 0.00 31.54 2.24
617 2268 2.817665 ACCTCTACAGTGGGGAGTAAC 58.182 52.381 11.75 0.00 33.22 2.50
618 2269 2.111255 ACCTCTACAGTGGGGAGTAACA 59.889 50.000 11.75 0.00 33.22 2.41
619 2270 3.246021 ACCTCTACAGTGGGGAGTAACAT 60.246 47.826 11.75 0.00 33.22 2.71
620 2271 4.016851 ACCTCTACAGTGGGGAGTAACATA 60.017 45.833 11.75 0.00 33.22 2.29
621 2272 4.960469 CCTCTACAGTGGGGAGTAACATAA 59.040 45.833 11.75 0.00 0.00 1.90
622 2273 5.163437 CCTCTACAGTGGGGAGTAACATAAC 60.163 48.000 11.75 0.00 0.00 1.89
623 2274 5.335261 TCTACAGTGGGGAGTAACATAACA 58.665 41.667 0.00 0.00 0.00 2.41
624 2275 5.962031 TCTACAGTGGGGAGTAACATAACAT 59.038 40.000 0.00 0.00 0.00 2.71
625 2276 4.843728 ACAGTGGGGAGTAACATAACATG 58.156 43.478 0.00 0.00 0.00 3.21
626 2277 3.627577 CAGTGGGGAGTAACATAACATGC 59.372 47.826 0.00 0.00 0.00 4.06
627 2278 3.265737 AGTGGGGAGTAACATAACATGCA 59.734 43.478 0.00 0.00 0.00 3.96
628 2279 4.013728 GTGGGGAGTAACATAACATGCAA 58.986 43.478 0.00 0.00 0.00 4.08
629 2280 4.013728 TGGGGAGTAACATAACATGCAAC 58.986 43.478 0.00 0.00 0.00 4.17
630 2281 4.013728 GGGGAGTAACATAACATGCAACA 58.986 43.478 0.00 0.00 0.00 3.33
631 2282 4.142469 GGGGAGTAACATAACATGCAACAC 60.142 45.833 0.00 0.00 0.00 3.32
632 2283 4.700213 GGGAGTAACATAACATGCAACACT 59.300 41.667 0.00 0.00 0.00 3.55
633 2284 5.183140 GGGAGTAACATAACATGCAACACTT 59.817 40.000 0.00 0.00 0.00 3.16
634 2285 6.314784 GGAGTAACATAACATGCAACACTTC 58.685 40.000 0.00 0.00 0.00 3.01
635 2286 6.072728 GGAGTAACATAACATGCAACACTTCA 60.073 38.462 0.00 0.00 0.00 3.02
636 2287 7.362056 GGAGTAACATAACATGCAACACTTCAT 60.362 37.037 0.00 0.00 0.00 2.57
637 2288 7.885297 AGTAACATAACATGCAACACTTCATT 58.115 30.769 0.00 0.00 0.00 2.57
638 2289 8.359642 AGTAACATAACATGCAACACTTCATTT 58.640 29.630 0.00 0.00 0.00 2.32
639 2290 9.619316 GTAACATAACATGCAACACTTCATTTA 57.381 29.630 0.00 0.00 0.00 1.40
641 2292 9.709495 AACATAACATGCAACACTTCATTTATT 57.291 25.926 0.00 0.00 0.00 1.40
645 2296 6.866480 ACATGCAACACTTCATTTATTAGGG 58.134 36.000 0.00 0.00 0.00 3.53
646 2297 6.437162 ACATGCAACACTTCATTTATTAGGGT 59.563 34.615 0.00 0.00 0.00 4.34
647 2298 7.613801 ACATGCAACACTTCATTTATTAGGGTA 59.386 33.333 0.00 0.00 0.00 3.69
648 2299 8.632679 CATGCAACACTTCATTTATTAGGGTAT 58.367 33.333 0.00 0.00 0.00 2.73
649 2300 9.860650 ATGCAACACTTCATTTATTAGGGTATA 57.139 29.630 0.00 0.00 0.00 1.47
650 2301 9.337396 TGCAACACTTCATTTATTAGGGTATAG 57.663 33.333 0.00 0.00 0.00 1.31
651 2302 9.555727 GCAACACTTCATTTATTAGGGTATAGA 57.444 33.333 0.00 0.00 0.00 1.98
661 2312 9.726438 ATTTATTAGGGTATAGACACATCTTGC 57.274 33.333 0.00 0.00 36.29 4.01
662 2313 5.546621 TTAGGGTATAGACACATCTTGCC 57.453 43.478 0.00 0.00 36.29 4.52
663 2314 3.384168 AGGGTATAGACACATCTTGCCA 58.616 45.455 0.00 0.00 36.29 4.92
664 2315 3.976654 AGGGTATAGACACATCTTGCCAT 59.023 43.478 0.00 0.00 36.29 4.40
665 2316 4.067896 GGGTATAGACACATCTTGCCATG 58.932 47.826 0.00 0.00 36.29 3.66
666 2317 4.202357 GGGTATAGACACATCTTGCCATGA 60.202 45.833 0.00 0.00 36.29 3.07
667 2318 5.513788 GGGTATAGACACATCTTGCCATGAT 60.514 44.000 0.00 0.00 36.29 2.45
668 2319 6.295859 GGGTATAGACACATCTTGCCATGATA 60.296 42.308 0.00 0.00 36.29 2.15
669 2320 7.334090 GGTATAGACACATCTTGCCATGATAT 58.666 38.462 0.00 0.00 36.29 1.63
670 2321 7.279536 GGTATAGACACATCTTGCCATGATATG 59.720 40.741 0.00 0.00 36.29 1.78
671 2322 5.045012 AGACACATCTTGCCATGATATGT 57.955 39.130 4.36 4.36 34.70 2.29
674 2325 4.855531 CACATCTTGCCATGATATGTGTG 58.144 43.478 0.00 3.12 41.46 3.82
675 2326 4.577283 CACATCTTGCCATGATATGTGTGA 59.423 41.667 6.31 0.00 41.46 3.58
676 2327 5.240844 CACATCTTGCCATGATATGTGTGAT 59.759 40.000 6.31 0.00 41.46 3.06
677 2328 5.240844 ACATCTTGCCATGATATGTGTGATG 59.759 40.000 0.00 0.00 35.23 3.07
678 2329 4.784177 TCTTGCCATGATATGTGTGATGT 58.216 39.130 0.00 0.00 0.00 3.06
679 2330 5.195185 TCTTGCCATGATATGTGTGATGTT 58.805 37.500 0.00 0.00 0.00 2.71
680 2331 6.355747 TCTTGCCATGATATGTGTGATGTTA 58.644 36.000 0.00 0.00 0.00 2.41
681 2332 6.260714 TCTTGCCATGATATGTGTGATGTTAC 59.739 38.462 0.00 0.00 0.00 2.50
682 2333 5.435291 TGCCATGATATGTGTGATGTTACA 58.565 37.500 0.00 0.00 0.00 2.41
683 2334 5.528320 TGCCATGATATGTGTGATGTTACAG 59.472 40.000 0.00 0.00 0.00 2.74
684 2335 5.528690 GCCATGATATGTGTGATGTTACAGT 59.471 40.000 0.00 0.00 0.00 3.55
685 2336 6.705825 GCCATGATATGTGTGATGTTACAGTA 59.294 38.462 0.00 0.00 0.00 2.74
686 2337 7.226523 GCCATGATATGTGTGATGTTACAGTAA 59.773 37.037 0.00 0.00 0.00 2.24
687 2338 8.551205 CCATGATATGTGTGATGTTACAGTAAC 58.449 37.037 15.58 15.58 39.11 2.50
688 2339 9.317936 CATGATATGTGTGATGTTACAGTAACT 57.682 33.333 21.56 9.41 39.38 2.24
691 2342 8.873215 ATATGTGTGATGTTACAGTAACTAGC 57.127 34.615 21.56 12.59 39.38 3.42
692 2343 6.340962 TGTGTGATGTTACAGTAACTAGCT 57.659 37.500 21.56 6.57 39.38 3.32
693 2344 7.457024 TGTGTGATGTTACAGTAACTAGCTA 57.543 36.000 21.56 4.25 39.38 3.32
694 2345 8.063200 TGTGTGATGTTACAGTAACTAGCTAT 57.937 34.615 21.56 8.59 39.38 2.97
695 2346 7.973944 TGTGTGATGTTACAGTAACTAGCTATG 59.026 37.037 21.56 0.00 39.38 2.23
696 2347 7.974501 GTGTGATGTTACAGTAACTAGCTATGT 59.025 37.037 21.56 0.00 39.38 2.29
697 2348 8.528643 TGTGATGTTACAGTAACTAGCTATGTT 58.471 33.333 21.56 7.75 39.38 2.71
700 2351 9.460906 GATGTTACAGTAACTAGCTATGTTACC 57.539 37.037 25.92 17.65 46.31 2.85
701 2352 8.352137 TGTTACAGTAACTAGCTATGTTACCA 57.648 34.615 25.92 19.04 46.31 3.25
702 2353 8.246180 TGTTACAGTAACTAGCTATGTTACCAC 58.754 37.037 25.92 20.75 46.31 4.16
703 2354 6.845758 ACAGTAACTAGCTATGTTACCACA 57.154 37.500 25.92 6.86 46.31 4.17
704 2355 7.419711 ACAGTAACTAGCTATGTTACCACAT 57.580 36.000 25.92 14.84 46.31 3.21
705 2356 7.265673 ACAGTAACTAGCTATGTTACCACATG 58.734 38.462 25.92 22.03 46.31 3.21
706 2357 6.201044 CAGTAACTAGCTATGTTACCACATGC 59.799 42.308 25.92 11.98 46.31 4.06
707 2358 4.073293 ACTAGCTATGTTACCACATGCC 57.927 45.455 0.00 0.00 43.92 4.40
708 2359 3.711704 ACTAGCTATGTTACCACATGCCT 59.288 43.478 0.00 0.00 43.92 4.75
709 2360 3.199880 AGCTATGTTACCACATGCCTC 57.800 47.619 0.00 0.00 43.92 4.70
710 2361 2.774234 AGCTATGTTACCACATGCCTCT 59.226 45.455 0.00 0.00 43.92 3.69
711 2362 3.200825 AGCTATGTTACCACATGCCTCTT 59.799 43.478 0.00 0.00 43.92 2.85
712 2363 3.947834 GCTATGTTACCACATGCCTCTTT 59.052 43.478 0.00 0.00 43.92 2.52
713 2364 4.399303 GCTATGTTACCACATGCCTCTTTT 59.601 41.667 0.00 0.00 43.92 2.27
714 2365 5.105756 GCTATGTTACCACATGCCTCTTTTT 60.106 40.000 0.00 0.00 43.92 1.94
715 2366 4.846779 TGTTACCACATGCCTCTTTTTC 57.153 40.909 0.00 0.00 0.00 2.29
716 2367 4.469657 TGTTACCACATGCCTCTTTTTCT 58.530 39.130 0.00 0.00 0.00 2.52
717 2368 4.892934 TGTTACCACATGCCTCTTTTTCTT 59.107 37.500 0.00 0.00 0.00 2.52
718 2369 5.009610 TGTTACCACATGCCTCTTTTTCTTC 59.990 40.000 0.00 0.00 0.00 2.87
719 2370 3.565307 ACCACATGCCTCTTTTTCTTCA 58.435 40.909 0.00 0.00 0.00 3.02
720 2371 4.154942 ACCACATGCCTCTTTTTCTTCAT 58.845 39.130 0.00 0.00 0.00 2.57
721 2372 4.590222 ACCACATGCCTCTTTTTCTTCATT 59.410 37.500 0.00 0.00 0.00 2.57
722 2373 5.774690 ACCACATGCCTCTTTTTCTTCATTA 59.225 36.000 0.00 0.00 0.00 1.90
723 2374 6.267471 ACCACATGCCTCTTTTTCTTCATTAA 59.733 34.615 0.00 0.00 0.00 1.40
724 2375 7.038799 ACCACATGCCTCTTTTTCTTCATTAAT 60.039 33.333 0.00 0.00 0.00 1.40
725 2376 7.820872 CCACATGCCTCTTTTTCTTCATTAATT 59.179 33.333 0.00 0.00 0.00 1.40
726 2377 9.859427 CACATGCCTCTTTTTCTTCATTAATTA 57.141 29.630 0.00 0.00 0.00 1.40
727 2378 9.860898 ACATGCCTCTTTTTCTTCATTAATTAC 57.139 29.630 0.00 0.00 0.00 1.89
728 2379 9.859427 CATGCCTCTTTTTCTTCATTAATTACA 57.141 29.630 0.00 0.00 0.00 2.41
730 2381 9.859427 TGCCTCTTTTTCTTCATTAATTACATG 57.141 29.630 0.00 0.00 0.00 3.21
731 2382 9.860898 GCCTCTTTTTCTTCATTAATTACATGT 57.139 29.630 2.69 2.69 0.00 3.21
750 2401 9.671279 TTACATGTCACATCATCTATTTTGTCT 57.329 29.630 0.00 0.00 0.00 3.41
752 2403 9.322773 ACATGTCACATCATCTATTTTGTCTAG 57.677 33.333 0.00 0.00 0.00 2.43
753 2404 9.538508 CATGTCACATCATCTATTTTGTCTAGA 57.461 33.333 0.00 0.00 0.00 2.43
762 2413 9.421399 TCATCTATTTTGTCTAGATAGGTGTGA 57.579 33.333 9.40 4.68 36.40 3.58
765 2416 9.201989 TCTATTTTGTCTAGATAGGTGTGATGT 57.798 33.333 0.00 0.00 0.00 3.06
766 2417 9.823647 CTATTTTGTCTAGATAGGTGTGATGTT 57.176 33.333 0.00 0.00 0.00 2.71
768 2419 8.997621 TTTTGTCTAGATAGGTGTGATGTTAC 57.002 34.615 0.00 0.00 0.00 2.50
769 2420 6.710597 TGTCTAGATAGGTGTGATGTTACC 57.289 41.667 0.00 0.00 37.23 2.85
770 2421 6.192044 TGTCTAGATAGGTGTGATGTTACCA 58.808 40.000 0.00 0.00 39.46 3.25
771 2422 6.096423 TGTCTAGATAGGTGTGATGTTACCAC 59.904 42.308 0.00 0.00 39.46 4.16
772 2423 4.755266 AGATAGGTGTGATGTTACCACC 57.245 45.455 0.00 0.00 39.46 4.61
773 2424 4.362677 AGATAGGTGTGATGTTACCACCT 58.637 43.478 14.34 14.34 46.68 4.00
776 2427 4.487714 AGGTGTGATGTTACCACCTATG 57.512 45.455 8.72 0.00 43.67 2.23
777 2428 3.844211 AGGTGTGATGTTACCACCTATGT 59.156 43.478 8.72 0.00 43.67 2.29
778 2429 4.288626 AGGTGTGATGTTACCACCTATGTT 59.711 41.667 8.72 0.00 43.67 2.71
779 2430 5.486063 AGGTGTGATGTTACCACCTATGTTA 59.514 40.000 8.72 0.00 43.67 2.41
780 2431 5.583457 GGTGTGATGTTACCACCTATGTTAC 59.417 44.000 0.00 0.00 36.94 2.50
781 2432 6.403878 GTGTGATGTTACCACCTATGTTACT 58.596 40.000 0.00 0.00 33.80 2.24
782 2433 6.877322 GTGTGATGTTACCACCTATGTTACTT 59.123 38.462 0.00 0.00 33.80 2.24
783 2434 7.389607 GTGTGATGTTACCACCTATGTTACTTT 59.610 37.037 0.00 0.00 33.80 2.66
784 2435 7.604927 TGTGATGTTACCACCTATGTTACTTTC 59.395 37.037 0.00 0.00 33.80 2.62
785 2436 7.604927 GTGATGTTACCACCTATGTTACTTTCA 59.395 37.037 0.00 0.00 0.00 2.69
786 2437 8.325787 TGATGTTACCACCTATGTTACTTTCAT 58.674 33.333 0.00 0.00 0.00 2.57
787 2438 9.174166 GATGTTACCACCTATGTTACTTTCATT 57.826 33.333 0.00 0.00 0.00 2.57
788 2439 8.330466 TGTTACCACCTATGTTACTTTCATTG 57.670 34.615 0.00 0.00 0.00 2.82
789 2440 7.940137 TGTTACCACCTATGTTACTTTCATTGT 59.060 33.333 0.00 0.00 0.00 2.71
790 2441 6.817765 ACCACCTATGTTACTTTCATTGTG 57.182 37.500 0.00 0.00 32.18 3.33
791 2442 5.710099 ACCACCTATGTTACTTTCATTGTGG 59.290 40.000 17.44 17.44 43.91 4.17
792 2443 5.943416 CCACCTATGTTACTTTCATTGTGGA 59.057 40.000 15.58 0.00 42.65 4.02
793 2444 6.603201 CCACCTATGTTACTTTCATTGTGGAT 59.397 38.462 15.58 0.00 42.65 3.41
794 2445 7.773224 CCACCTATGTTACTTTCATTGTGGATA 59.227 37.037 15.58 0.00 42.65 2.59
795 2446 8.830580 CACCTATGTTACTTTCATTGTGGATAG 58.169 37.037 0.00 0.00 0.00 2.08
796 2447 8.548877 ACCTATGTTACTTTCATTGTGGATAGT 58.451 33.333 0.00 0.00 34.24 2.12
797 2448 9.046296 CCTATGTTACTTTCATTGTGGATAGTC 57.954 37.037 0.00 0.00 32.48 2.59
798 2449 9.823647 CTATGTTACTTTCATTGTGGATAGTCT 57.176 33.333 0.00 0.00 32.48 3.24
801 2452 9.653287 TGTTACTTTCATTGTGGATAGTCTTAG 57.347 33.333 0.00 0.00 32.48 2.18
802 2453 9.871238 GTTACTTTCATTGTGGATAGTCTTAGA 57.129 33.333 0.00 0.00 32.48 2.10
805 2456 9.220767 ACTTTCATTGTGGATAGTCTTAGAAAC 57.779 33.333 0.00 0.00 0.00 2.78
806 2457 9.219603 CTTTCATTGTGGATAGTCTTAGAAACA 57.780 33.333 0.00 0.00 0.00 2.83
818 2469 4.583073 GTCTTAGAAACAGGGGAGCAAAAA 59.417 41.667 0.00 0.00 0.00 1.94
995 2658 2.675242 CCCATTCCCGCACTACCCA 61.675 63.158 0.00 0.00 0.00 4.51
1266 2929 3.530104 CGCGTCGCAGGTTCGTAC 61.530 66.667 18.75 0.00 0.00 3.67
1977 3711 0.675837 ACTGCGCATGCTTCATCAGT 60.676 50.000 12.24 16.15 43.34 3.41
1978 3712 0.450583 CTGCGCATGCTTCATCAGTT 59.549 50.000 12.24 0.00 43.34 3.16
1979 3713 1.667212 CTGCGCATGCTTCATCAGTTA 59.333 47.619 12.24 0.00 43.34 2.24
2089 4113 4.468510 CCCCATGGATATGCTGCAATATTT 59.531 41.667 15.22 0.00 32.79 1.40
2215 4244 5.382618 AAACAGAAATGGATCTCTGCAAC 57.617 39.130 9.08 0.00 42.39 4.17
2335 4364 5.616270 TGACACTTTGCATCTTTACCTGTA 58.384 37.500 0.00 0.00 0.00 2.74
2709 4750 2.205749 TGCAGTAGGGTGGGTGGA 59.794 61.111 0.00 0.00 0.00 4.02
2790 4831 5.598416 TCATCATCTTGTACTACCACCAG 57.402 43.478 0.00 0.00 0.00 4.00
2791 4832 3.887621 TCATCTTGTACTACCACCAGC 57.112 47.619 0.00 0.00 0.00 4.85
2792 4833 2.500098 TCATCTTGTACTACCACCAGCC 59.500 50.000 0.00 0.00 0.00 4.85
2793 4834 2.018355 TCTTGTACTACCACCAGCCA 57.982 50.000 0.00 0.00 0.00 4.75
2811 4852 1.064060 CCAGCAGTAATAAAGTGGCGC 59.936 52.381 0.00 0.00 0.00 6.53
2818 4859 4.814234 CAGTAATAAAGTGGCGCCTATGAA 59.186 41.667 29.70 11.02 0.00 2.57
2859 4900 7.775093 CCATCTCCAAGAATTGTTATCCTTGTA 59.225 37.037 0.00 0.00 46.99 2.41
2862 4903 8.548025 TCTCCAAGAATTGTTATCCTTGTATCA 58.452 33.333 0.00 0.00 46.99 2.15
2903 4952 5.674569 GCAATGCAGATGTAGTGGTAACTTG 60.675 44.000 0.00 0.00 37.88 3.16
2905 4954 2.678336 GCAGATGTAGTGGTAACTTGCC 59.322 50.000 0.00 0.00 37.88 4.52
2907 4956 3.935203 CAGATGTAGTGGTAACTTGCCTG 59.065 47.826 0.00 0.00 37.88 4.85
2908 4957 2.178912 TGTAGTGGTAACTTGCCTGC 57.821 50.000 0.00 0.00 37.88 4.85
2910 4959 2.105821 TGTAGTGGTAACTTGCCTGCTT 59.894 45.455 0.00 0.00 37.88 3.91
2913 4962 2.158608 AGTGGTAACTTGCCTGCTTCTT 60.159 45.455 0.00 0.00 30.14 2.52
2914 4963 2.623416 GTGGTAACTTGCCTGCTTCTTT 59.377 45.455 0.00 0.00 37.61 2.52
2915 4964 3.068165 GTGGTAACTTGCCTGCTTCTTTT 59.932 43.478 0.00 0.00 37.61 2.27
2917 4966 4.202111 TGGTAACTTGCCTGCTTCTTTTTC 60.202 41.667 0.00 0.00 37.61 2.29
2918 4967 4.202111 GGTAACTTGCCTGCTTCTTTTTCA 60.202 41.667 0.00 0.00 0.00 2.69
2919 4968 4.677673 AACTTGCCTGCTTCTTTTTCAT 57.322 36.364 0.00 0.00 0.00 2.57
2920 4969 3.986277 ACTTGCCTGCTTCTTTTTCATG 58.014 40.909 0.00 0.00 0.00 3.07
2921 4970 2.443887 TGCCTGCTTCTTTTTCATGC 57.556 45.000 0.00 0.00 0.00 4.06
2922 4971 1.965643 TGCCTGCTTCTTTTTCATGCT 59.034 42.857 0.00 0.00 0.00 3.79
2923 4972 2.029649 TGCCTGCTTCTTTTTCATGCTC 60.030 45.455 0.00 0.00 0.00 4.26
2928 4977 3.194116 TGCTTCTTTTTCATGCTCCCATC 59.806 43.478 0.00 0.00 0.00 3.51
2929 4978 3.429960 GCTTCTTTTTCATGCTCCCATCC 60.430 47.826 0.00 0.00 0.00 3.51
2930 4979 2.368439 TCTTTTTCATGCTCCCATCCG 58.632 47.619 0.00 0.00 0.00 4.18
2931 4980 2.094675 CTTTTTCATGCTCCCATCCGT 58.905 47.619 0.00 0.00 0.00 4.69
2932 4981 1.462616 TTTTCATGCTCCCATCCGTG 58.537 50.000 0.00 0.00 0.00 4.94
2933 4982 1.031571 TTTCATGCTCCCATCCGTGC 61.032 55.000 0.00 0.00 0.00 5.34
2934 4983 1.913951 TTCATGCTCCCATCCGTGCT 61.914 55.000 0.00 0.00 0.00 4.40
2935 4984 1.452651 CATGCTCCCATCCGTGCTT 60.453 57.895 0.00 0.00 0.00 3.91
2936 4985 1.153086 ATGCTCCCATCCGTGCTTC 60.153 57.895 0.00 0.00 0.00 3.86
2937 4986 2.514824 GCTCCCATCCGTGCTTCC 60.515 66.667 0.00 0.00 0.00 3.46
2938 4987 3.036429 GCTCCCATCCGTGCTTCCT 62.036 63.158 0.00 0.00 0.00 3.36
2939 4988 1.144936 CTCCCATCCGTGCTTCCTC 59.855 63.158 0.00 0.00 0.00 3.71
2940 4989 1.612146 TCCCATCCGTGCTTCCTCA 60.612 57.895 0.00 0.00 0.00 3.86
2941 4990 0.982852 TCCCATCCGTGCTTCCTCAT 60.983 55.000 0.00 0.00 0.00 2.90
2942 4991 0.758734 CCCATCCGTGCTTCCTCATA 59.241 55.000 0.00 0.00 0.00 2.15
2943 4992 1.541233 CCCATCCGTGCTTCCTCATAC 60.541 57.143 0.00 0.00 0.00 2.39
2944 4993 1.138859 CCATCCGTGCTTCCTCATACA 59.861 52.381 0.00 0.00 0.00 2.29
2945 4994 2.224378 CCATCCGTGCTTCCTCATACAT 60.224 50.000 0.00 0.00 0.00 2.29
2946 4995 2.602257 TCCGTGCTTCCTCATACATG 57.398 50.000 0.00 0.00 0.00 3.21
2947 4996 1.138859 TCCGTGCTTCCTCATACATGG 59.861 52.381 0.00 0.00 39.99 3.66
2948 4997 0.940126 CGTGCTTCCTCATACATGGC 59.060 55.000 0.00 0.00 0.00 4.40
2949 4998 1.312815 GTGCTTCCTCATACATGGCC 58.687 55.000 0.00 0.00 0.00 5.36
2950 4999 1.133976 GTGCTTCCTCATACATGGCCT 60.134 52.381 3.32 0.00 0.00 5.19
2951 5000 1.141657 TGCTTCCTCATACATGGCCTC 59.858 52.381 3.32 0.00 0.00 4.70
2952 5001 1.419387 GCTTCCTCATACATGGCCTCT 59.581 52.381 3.32 0.00 0.00 3.69
2953 5002 2.158696 GCTTCCTCATACATGGCCTCTT 60.159 50.000 3.32 0.00 0.00 2.85
2954 5003 3.474600 CTTCCTCATACATGGCCTCTTG 58.525 50.000 3.32 1.36 0.00 3.02
2955 5004 2.763039 TCCTCATACATGGCCTCTTGA 58.237 47.619 3.32 0.00 0.00 3.02
2956 5005 3.114606 TCCTCATACATGGCCTCTTGAA 58.885 45.455 3.32 0.00 0.00 2.69
2957 5006 3.523157 TCCTCATACATGGCCTCTTGAAA 59.477 43.478 3.32 0.00 0.00 2.69
2958 5007 3.881688 CCTCATACATGGCCTCTTGAAAG 59.118 47.826 3.32 0.00 0.00 2.62
2959 5008 4.384537 CCTCATACATGGCCTCTTGAAAGA 60.385 45.833 3.32 0.00 0.00 2.52
2960 5009 5.178096 TCATACATGGCCTCTTGAAAGAA 57.822 39.130 3.32 0.00 34.03 2.52
2961 5010 5.569355 TCATACATGGCCTCTTGAAAGAAA 58.431 37.500 3.32 0.00 34.03 2.52
2962 5011 6.009589 TCATACATGGCCTCTTGAAAGAAAA 58.990 36.000 3.32 0.00 34.03 2.29
2963 5012 6.664816 TCATACATGGCCTCTTGAAAGAAAAT 59.335 34.615 3.32 0.00 34.03 1.82
2964 5013 7.833682 TCATACATGGCCTCTTGAAAGAAAATA 59.166 33.333 3.32 0.00 34.03 1.40
2965 5014 6.916360 ACATGGCCTCTTGAAAGAAAATAA 57.084 33.333 3.32 0.00 34.03 1.40
2966 5015 6.928520 ACATGGCCTCTTGAAAGAAAATAAG 58.071 36.000 3.32 0.00 34.03 1.73
2967 5016 5.391312 TGGCCTCTTGAAAGAAAATAAGC 57.609 39.130 3.32 0.00 34.03 3.09
2968 5017 4.220602 TGGCCTCTTGAAAGAAAATAAGCC 59.779 41.667 3.32 0.00 34.03 4.35
2969 5018 4.382040 GGCCTCTTGAAAGAAAATAAGCCC 60.382 45.833 0.00 0.00 34.03 5.19
2970 5019 4.382040 GCCTCTTGAAAGAAAATAAGCCCC 60.382 45.833 0.00 0.00 34.03 5.80
2971 5020 4.142381 CCTCTTGAAAGAAAATAAGCCCCG 60.142 45.833 0.00 0.00 34.03 5.73
2972 5021 3.761752 TCTTGAAAGAAAATAAGCCCCGG 59.238 43.478 0.00 0.00 30.73 5.73
2973 5022 3.163616 TGAAAGAAAATAAGCCCCGGT 57.836 42.857 0.00 0.00 0.00 5.28
2974 5023 3.086282 TGAAAGAAAATAAGCCCCGGTC 58.914 45.455 0.00 0.00 0.00 4.79
2975 5024 2.139323 AAGAAAATAAGCCCCGGTCC 57.861 50.000 0.00 0.00 0.00 4.46
2976 5025 0.257905 AGAAAATAAGCCCCGGTCCC 59.742 55.000 0.00 0.00 0.00 4.46
2977 5026 0.033894 GAAAATAAGCCCCGGTCCCA 60.034 55.000 0.00 0.00 0.00 4.37
2978 5027 0.634465 AAAATAAGCCCCGGTCCCAT 59.366 50.000 0.00 0.00 0.00 4.00
2979 5028 0.634465 AAATAAGCCCCGGTCCCATT 59.366 50.000 0.00 0.00 0.00 3.16
2980 5029 0.185175 AATAAGCCCCGGTCCCATTC 59.815 55.000 0.00 0.00 0.00 2.67
2981 5030 1.716028 ATAAGCCCCGGTCCCATTCC 61.716 60.000 0.00 0.00 0.00 3.01
2984 5033 3.809013 CCCCGGTCCCATTCCCTG 61.809 72.222 0.00 0.00 0.00 4.45
2985 5034 2.690881 CCCGGTCCCATTCCCTGA 60.691 66.667 0.00 0.00 0.00 3.86
2986 5035 2.305607 CCCGGTCCCATTCCCTGAA 61.306 63.158 0.00 0.00 0.00 3.02
2987 5036 1.688811 CCGGTCCCATTCCCTGAAA 59.311 57.895 0.00 0.00 0.00 2.69
2988 5037 0.039035 CCGGTCCCATTCCCTGAAAA 59.961 55.000 0.00 0.00 0.00 2.29
2989 5038 1.341976 CCGGTCCCATTCCCTGAAAAT 60.342 52.381 0.00 0.00 0.00 1.82
2990 5039 2.024414 CGGTCCCATTCCCTGAAAATC 58.976 52.381 0.00 0.00 0.00 2.17
2991 5040 2.620367 CGGTCCCATTCCCTGAAAATCA 60.620 50.000 0.00 0.00 0.00 2.57
2992 5041 3.026694 GGTCCCATTCCCTGAAAATCAG 58.973 50.000 0.32 0.32 43.91 2.90
3014 5063 8.567198 TCAGGGGATGATTAGATTAGAAAAGA 57.433 34.615 0.00 0.00 31.12 2.52
3015 5064 9.003145 TCAGGGGATGATTAGATTAGAAAAGAA 57.997 33.333 0.00 0.00 31.12 2.52
3016 5065 9.632638 CAGGGGATGATTAGATTAGAAAAGAAA 57.367 33.333 0.00 0.00 0.00 2.52
3044 5093 5.613358 AAAAGAACAGCCGTAAGATGAAG 57.387 39.130 0.00 0.00 43.02 3.02
3045 5094 3.963428 AGAACAGCCGTAAGATGAAGT 57.037 42.857 0.00 0.00 43.02 3.01
3046 5095 3.589988 AGAACAGCCGTAAGATGAAGTG 58.410 45.455 0.00 0.00 43.02 3.16
3047 5096 3.258372 AGAACAGCCGTAAGATGAAGTGA 59.742 43.478 0.00 0.00 43.02 3.41
3048 5097 3.238108 ACAGCCGTAAGATGAAGTGAG 57.762 47.619 0.00 0.00 43.02 3.51
3049 5098 2.826128 ACAGCCGTAAGATGAAGTGAGA 59.174 45.455 0.00 0.00 43.02 3.27
3050 5099 3.119316 ACAGCCGTAAGATGAAGTGAGAG 60.119 47.826 0.00 0.00 43.02 3.20
3051 5100 2.159170 AGCCGTAAGATGAAGTGAGAGC 60.159 50.000 0.00 0.00 43.02 4.09
3052 5101 2.417379 GCCGTAAGATGAAGTGAGAGCA 60.417 50.000 0.00 0.00 43.02 4.26
3053 5102 3.182967 CCGTAAGATGAAGTGAGAGCAC 58.817 50.000 0.00 0.00 42.86 4.40
3054 5103 2.848887 CGTAAGATGAAGTGAGAGCACG 59.151 50.000 0.00 0.00 45.90 5.34
3055 5104 4.273819 CGTAAGATGAAGTGAGAGCACGG 61.274 52.174 0.00 0.00 45.90 4.94
3056 5105 6.442651 CGTAAGATGAAGTGAGAGCACGGA 62.443 50.000 0.00 0.00 45.90 4.69
3057 5106 7.665254 CGTAAGATGAAGTGAGAGCACGGAT 62.665 48.000 0.00 0.00 45.90 4.18
3069 5118 3.011085 CACGGATGCATACATGGCT 57.989 52.632 10.18 0.00 36.35 4.75
3070 5119 1.311859 CACGGATGCATACATGGCTT 58.688 50.000 10.18 0.00 36.35 4.35
3071 5120 1.002142 CACGGATGCATACATGGCTTG 60.002 52.381 10.18 0.00 36.35 4.01
3072 5121 1.134128 ACGGATGCATACATGGCTTGA 60.134 47.619 10.18 0.00 36.35 3.02
3073 5122 2.156917 CGGATGCATACATGGCTTGAT 58.843 47.619 10.18 0.00 36.35 2.57
3074 5123 2.555325 CGGATGCATACATGGCTTGATT 59.445 45.455 10.18 0.00 36.35 2.57
3075 5124 3.005050 CGGATGCATACATGGCTTGATTT 59.995 43.478 10.18 0.00 36.35 2.17
3076 5125 4.304110 GGATGCATACATGGCTTGATTTG 58.696 43.478 3.28 3.11 36.35 2.32
3077 5126 4.038282 GGATGCATACATGGCTTGATTTGA 59.962 41.667 3.28 0.00 36.35 2.69
3078 5127 5.279306 GGATGCATACATGGCTTGATTTGAT 60.279 40.000 3.28 0.00 36.35 2.57
3079 5128 5.601583 TGCATACATGGCTTGATTTGATT 57.398 34.783 7.45 0.00 0.00 2.57
3080 5129 5.353111 TGCATACATGGCTTGATTTGATTG 58.647 37.500 7.45 0.00 0.00 2.67
3081 5130 4.748102 GCATACATGGCTTGATTTGATTGG 59.252 41.667 7.45 0.00 0.00 3.16
3082 5131 5.452216 GCATACATGGCTTGATTTGATTGGA 60.452 40.000 7.45 0.00 0.00 3.53
3083 5132 6.575267 CATACATGGCTTGATTTGATTGGAA 58.425 36.000 7.45 0.00 0.00 3.53
3084 5133 5.080969 ACATGGCTTGATTTGATTGGAAG 57.919 39.130 7.45 0.00 0.00 3.46
3085 5134 4.773674 ACATGGCTTGATTTGATTGGAAGA 59.226 37.500 7.45 0.00 0.00 2.87
3086 5135 5.246656 ACATGGCTTGATTTGATTGGAAGAA 59.753 36.000 7.45 0.00 0.00 2.52
3087 5136 5.804944 TGGCTTGATTTGATTGGAAGAAA 57.195 34.783 0.00 0.00 0.00 2.52
3088 5137 6.172136 TGGCTTGATTTGATTGGAAGAAAA 57.828 33.333 0.00 0.00 0.00 2.29
3089 5138 6.771573 TGGCTTGATTTGATTGGAAGAAAAT 58.228 32.000 0.00 0.00 0.00 1.82
3090 5139 7.905265 TGGCTTGATTTGATTGGAAGAAAATA 58.095 30.769 0.00 0.00 0.00 1.40
3091 5140 8.373981 TGGCTTGATTTGATTGGAAGAAAATAA 58.626 29.630 0.00 0.00 0.00 1.40
3092 5141 8.876790 GGCTTGATTTGATTGGAAGAAAATAAG 58.123 33.333 0.00 0.00 0.00 1.73
3093 5142 8.876790 GCTTGATTTGATTGGAAGAAAATAAGG 58.123 33.333 0.00 0.00 0.00 2.69
3094 5143 9.933723 CTTGATTTGATTGGAAGAAAATAAGGT 57.066 29.630 0.00 0.00 0.00 3.50
3095 5144 9.927668 TTGATTTGATTGGAAGAAAATAAGGTC 57.072 29.630 0.00 0.00 0.00 3.85
3096 5145 8.531146 TGATTTGATTGGAAGAAAATAAGGTCC 58.469 33.333 0.00 0.00 0.00 4.46
3097 5146 6.509418 TTGATTGGAAGAAAATAAGGTCCG 57.491 37.500 0.00 0.00 0.00 4.79
3098 5147 4.947388 TGATTGGAAGAAAATAAGGTCCGG 59.053 41.667 0.00 0.00 0.00 5.14
3099 5148 2.718563 TGGAAGAAAATAAGGTCCGGC 58.281 47.619 0.00 0.00 0.00 6.13
3100 5149 2.040545 TGGAAGAAAATAAGGTCCGGCA 59.959 45.455 0.00 0.00 0.00 5.69
3101 5150 2.422479 GGAAGAAAATAAGGTCCGGCAC 59.578 50.000 0.00 0.00 0.00 5.01
3109 5158 3.637273 GGTCCGGCACCACTCCTT 61.637 66.667 15.65 0.00 45.98 3.36
3110 5159 2.358737 GTCCGGCACCACTCCTTG 60.359 66.667 0.00 0.00 0.00 3.61
3111 5160 2.525629 TCCGGCACCACTCCTTGA 60.526 61.111 0.00 0.00 0.00 3.02
3112 5161 2.144078 TCCGGCACCACTCCTTGAA 61.144 57.895 0.00 0.00 0.00 2.69
3113 5162 1.228124 CCGGCACCACTCCTTGAAA 60.228 57.895 0.00 0.00 0.00 2.69
3114 5163 0.821711 CCGGCACCACTCCTTGAAAA 60.822 55.000 0.00 0.00 0.00 2.29
3115 5164 1.247567 CGGCACCACTCCTTGAAAAT 58.752 50.000 0.00 0.00 0.00 1.82
3116 5165 1.200020 CGGCACCACTCCTTGAAAATC 59.800 52.381 0.00 0.00 0.00 2.17
3117 5166 2.238521 GGCACCACTCCTTGAAAATCA 58.761 47.619 0.00 0.00 0.00 2.57
3118 5167 2.627699 GGCACCACTCCTTGAAAATCAA 59.372 45.455 0.00 0.00 34.79 2.57
3181 5230 2.961526 TCGTAAGATGAAGTGGGAGC 57.038 50.000 0.00 0.00 45.01 4.70
3182 5231 2.176045 TCGTAAGATGAAGTGGGAGCA 58.824 47.619 0.00 0.00 45.01 4.26
3183 5232 2.094182 TCGTAAGATGAAGTGGGAGCAC 60.094 50.000 0.00 0.00 45.01 4.40
3184 5233 2.353704 CGTAAGATGAAGTGGGAGCACA 60.354 50.000 0.00 0.00 43.02 4.57
3185 5234 3.679917 CGTAAGATGAAGTGGGAGCACAT 60.680 47.826 0.00 0.00 43.02 3.21
3186 5235 4.441495 CGTAAGATGAAGTGGGAGCACATA 60.441 45.833 0.00 0.00 43.02 2.29
3187 5236 4.785346 AAGATGAAGTGGGAGCACATAT 57.215 40.909 0.00 0.00 0.00 1.78
3188 5237 4.082665 AGATGAAGTGGGAGCACATATG 57.917 45.455 0.00 0.00 0.00 1.78
3189 5238 2.715749 TGAAGTGGGAGCACATATGG 57.284 50.000 7.80 0.00 0.00 2.74
3190 5239 1.312815 GAAGTGGGAGCACATATGGC 58.687 55.000 7.80 7.80 0.00 4.40
3191 5240 0.625316 AAGTGGGAGCACATATGGCA 59.375 50.000 15.63 0.00 0.00 4.92
3192 5241 0.182061 AGTGGGAGCACATATGGCAG 59.818 55.000 15.63 3.92 0.00 4.85
3193 5242 1.152902 TGGGAGCACATATGGCAGC 60.153 57.895 15.63 12.22 0.00 5.25
3194 5243 1.152902 GGGAGCACATATGGCAGCA 60.153 57.895 16.11 0.00 0.00 4.41
3195 5244 0.538977 GGGAGCACATATGGCAGCAT 60.539 55.000 16.11 4.95 0.00 3.79
3196 5245 0.596577 GGAGCACATATGGCAGCATG 59.403 55.000 16.11 9.62 40.87 4.06
3197 5246 0.596577 GAGCACATATGGCAGCATGG 59.403 55.000 16.11 6.46 35.86 3.66
3198 5247 0.184211 AGCACATATGGCAGCATGGA 59.816 50.000 16.11 0.00 35.86 3.41
3199 5248 0.596577 GCACATATGGCAGCATGGAG 59.403 55.000 7.80 8.67 35.86 3.86
3200 5249 1.816572 GCACATATGGCAGCATGGAGA 60.817 52.381 7.80 0.00 35.86 3.71
3201 5250 2.152016 CACATATGGCAGCATGGAGAG 58.848 52.381 7.80 1.18 35.86 3.20
3202 5251 1.073444 ACATATGGCAGCATGGAGAGG 59.927 52.381 7.80 0.00 35.86 3.69
3203 5252 0.697079 ATATGGCAGCATGGAGAGGG 59.303 55.000 0.00 0.00 35.86 4.30
3204 5253 0.400381 TATGGCAGCATGGAGAGGGA 60.400 55.000 0.00 0.00 35.86 4.20
3205 5254 1.706995 ATGGCAGCATGGAGAGGGAG 61.707 60.000 0.00 0.00 35.86 4.30
3206 5255 2.203181 GCAGCATGGAGAGGGAGC 60.203 66.667 0.00 0.00 35.86 4.70
3207 5256 3.040206 GCAGCATGGAGAGGGAGCA 62.040 63.158 0.00 0.00 35.86 4.26
3208 5257 1.146485 CAGCATGGAGAGGGAGCAG 59.854 63.158 0.00 0.00 0.00 4.24
3209 5258 2.071262 AGCATGGAGAGGGAGCAGG 61.071 63.158 0.00 0.00 0.00 4.85
3210 5259 2.509916 CATGGAGAGGGAGCAGGC 59.490 66.667 0.00 0.00 0.00 4.85
3211 5260 2.041762 ATGGAGAGGGAGCAGGCA 59.958 61.111 0.00 0.00 0.00 4.75
3212 5261 1.617536 ATGGAGAGGGAGCAGGCAA 60.618 57.895 0.00 0.00 0.00 4.52
3213 5262 1.633915 ATGGAGAGGGAGCAGGCAAG 61.634 60.000 0.00 0.00 0.00 4.01
3214 5263 2.124778 GAGAGGGAGCAGGCAAGC 60.125 66.667 0.00 0.00 0.00 4.01
3215 5264 3.695747 GAGAGGGAGCAGGCAAGCC 62.696 68.421 2.02 2.02 34.23 4.35
3219 5268 4.496336 GGAGCAGGCAAGCCGGAT 62.496 66.667 15.46 8.74 41.95 4.18
3220 5269 2.899339 GAGCAGGCAAGCCGGATC 60.899 66.667 15.46 14.32 39.23 3.36
3221 5270 4.496336 AGCAGGCAAGCCGGATCC 62.496 66.667 15.46 0.00 41.95 3.36
3222 5271 4.802051 GCAGGCAAGCCGGATCCA 62.802 66.667 15.46 0.00 41.95 3.41
3223 5272 2.194056 CAGGCAAGCCGGATCCAT 59.806 61.111 13.41 0.00 41.95 3.41
3224 5273 1.451504 CAGGCAAGCCGGATCCATA 59.548 57.895 13.41 0.00 41.95 2.74
3225 5274 0.037303 CAGGCAAGCCGGATCCATAT 59.963 55.000 13.41 0.00 41.95 1.78
3244 5293 1.873698 TTTGGTTCGGAGTACAGCAC 58.126 50.000 0.00 0.00 0.00 4.40
3380 5430 0.632294 AGTCTCCCTACACCCTCCTC 59.368 60.000 0.00 0.00 0.00 3.71
3381 5431 0.397394 GTCTCCCTACACCCTCCTCC 60.397 65.000 0.00 0.00 0.00 4.30
3382 5432 0.555369 TCTCCCTACACCCTCCTCCT 60.555 60.000 0.00 0.00 0.00 3.69
3682 6394 2.094494 TGAGACGGTGAAATCAGCTCTC 60.094 50.000 21.72 21.72 42.29 3.20
3683 6395 1.205893 AGACGGTGAAATCAGCTCTCC 59.794 52.381 10.51 0.00 41.81 3.71
3684 6396 0.250513 ACGGTGAAATCAGCTCTCCC 59.749 55.000 10.51 0.00 41.81 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.594134 AGCACATTGTCTAGTCTCAAGC 58.406 45.455 0.00 0.00 0.00 4.01
201 339 6.402981 ACCCTATTGTAGGTCCAAAGAAAT 57.597 37.500 2.60 0.00 44.73 2.17
228 366 3.259064 ACTTAACGAATCCACATCCACG 58.741 45.455 0.00 0.00 0.00 4.94
316 454 6.454795 TCTTTTTGGCCAGTATGATTTGTTC 58.545 36.000 5.11 0.00 39.69 3.18
420 565 4.645588 TGTGGAAACTTTAATGGGAAACGT 59.354 37.500 0.00 0.00 0.00 3.99
435 580 7.587757 GCGATATGATTGTATCTTTGTGGAAAC 59.412 37.037 0.00 0.00 0.00 2.78
469 2120 4.810491 GTGTTTGTTTTGGAGTACGGAGTA 59.190 41.667 0.00 0.00 45.11 2.59
471 2122 3.002965 GGTGTTTGTTTTGGAGTACGGAG 59.997 47.826 0.00 0.00 0.00 4.63
472 2123 2.944349 GGTGTTTGTTTTGGAGTACGGA 59.056 45.455 0.00 0.00 0.00 4.69
473 2124 2.683867 TGGTGTTTGTTTTGGAGTACGG 59.316 45.455 0.00 0.00 0.00 4.02
474 2125 4.142556 ACTTGGTGTTTGTTTTGGAGTACG 60.143 41.667 0.00 0.00 0.00 3.67
516 2167 7.883833 TGGCTAGTCTAAGAGATACGATTGTAT 59.116 37.037 5.22 5.22 43.97 2.29
536 2187 7.815068 GTCTATGTTACTATCCATTGTGGCTAG 59.185 40.741 5.55 5.55 40.94 3.42
537 2188 7.509318 AGTCTATGTTACTATCCATTGTGGCTA 59.491 37.037 0.00 0.00 37.47 3.93
538 2189 6.327626 AGTCTATGTTACTATCCATTGTGGCT 59.672 38.462 0.00 0.00 37.47 4.75
539 2190 6.525629 AGTCTATGTTACTATCCATTGTGGC 58.474 40.000 0.00 0.00 37.47 5.01
540 2191 8.861086 ACTAGTCTATGTTACTATCCATTGTGG 58.139 37.037 0.00 0.00 39.43 4.17
551 2202 8.951614 TGCCCATATTACTAGTCTATGTTACT 57.048 34.615 17.61 0.00 0.00 2.24
552 2203 9.587772 CATGCCCATATTACTAGTCTATGTTAC 57.412 37.037 17.61 10.70 0.00 2.50
553 2204 9.321532 ACATGCCCATATTACTAGTCTATGTTA 57.678 33.333 17.61 8.80 0.00 2.41
554 2205 8.207350 ACATGCCCATATTACTAGTCTATGTT 57.793 34.615 17.61 4.45 0.00 2.71
555 2206 7.798710 ACATGCCCATATTACTAGTCTATGT 57.201 36.000 17.61 3.95 0.00 2.29
556 2207 9.587772 GTAACATGCCCATATTACTAGTCTATG 57.412 37.037 0.00 8.39 30.30 2.23
557 2208 9.548631 AGTAACATGCCCATATTACTAGTCTAT 57.451 33.333 9.53 0.00 38.74 1.98
558 2209 8.951614 AGTAACATGCCCATATTACTAGTCTA 57.048 34.615 9.53 0.00 38.74 2.59
559 2210 7.857404 AGTAACATGCCCATATTACTAGTCT 57.143 36.000 9.53 0.00 38.74 3.24
563 2214 8.951614 AGACTAGTAACATGCCCATATTACTA 57.048 34.615 14.83 14.83 38.74 1.82
564 2215 7.857404 AGACTAGTAACATGCCCATATTACT 57.143 36.000 14.28 14.28 42.00 2.24
565 2216 9.587772 CATAGACTAGTAACATGCCCATATTAC 57.412 37.037 0.00 2.10 32.41 1.89
566 2217 9.321532 ACATAGACTAGTAACATGCCCATATTA 57.678 33.333 0.00 0.00 0.00 0.98
567 2218 8.207350 ACATAGACTAGTAACATGCCCATATT 57.793 34.615 0.00 0.00 0.00 1.28
568 2219 7.798710 ACATAGACTAGTAACATGCCCATAT 57.201 36.000 0.00 0.00 0.00 1.78
569 2220 7.612065 AACATAGACTAGTAACATGCCCATA 57.388 36.000 0.00 0.00 0.00 2.74
570 2221 6.500589 AACATAGACTAGTAACATGCCCAT 57.499 37.500 0.00 0.00 0.00 4.00
571 2222 5.950544 AACATAGACTAGTAACATGCCCA 57.049 39.130 0.00 0.00 0.00 5.36
572 2223 7.052142 AGTAACATAGACTAGTAACATGCCC 57.948 40.000 0.00 0.00 0.00 5.36
573 2224 8.081025 GGTAGTAACATAGACTAGTAACATGCC 58.919 40.741 0.00 0.00 30.08 4.40
574 2225 8.848182 AGGTAGTAACATAGACTAGTAACATGC 58.152 37.037 0.00 0.00 30.08 4.06
581 2232 8.991275 ACTGTAGAGGTAGTAACATAGACTAGT 58.009 37.037 0.00 0.00 30.08 2.57
582 2233 9.263538 CACTGTAGAGGTAGTAACATAGACTAG 57.736 40.741 0.00 0.00 30.08 2.57
583 2234 8.209584 CCACTGTAGAGGTAGTAACATAGACTA 58.790 40.741 0.00 0.00 0.00 2.59
584 2235 7.055378 CCACTGTAGAGGTAGTAACATAGACT 58.945 42.308 0.00 0.00 0.00 3.24
585 2236 6.262720 CCCACTGTAGAGGTAGTAACATAGAC 59.737 46.154 0.00 0.00 0.00 2.59
586 2237 6.363065 CCCACTGTAGAGGTAGTAACATAGA 58.637 44.000 0.00 0.00 0.00 1.98
587 2238 5.535406 CCCCACTGTAGAGGTAGTAACATAG 59.465 48.000 0.00 0.00 0.00 2.23
588 2239 5.194334 TCCCCACTGTAGAGGTAGTAACATA 59.806 44.000 0.00 0.00 0.00 2.29
589 2240 4.016851 TCCCCACTGTAGAGGTAGTAACAT 60.017 45.833 0.00 0.00 0.00 2.71
590 2241 3.334581 TCCCCACTGTAGAGGTAGTAACA 59.665 47.826 0.00 0.00 0.00 2.41
591 2242 3.952967 CTCCCCACTGTAGAGGTAGTAAC 59.047 52.174 0.00 0.00 0.00 2.50
592 2243 3.595138 ACTCCCCACTGTAGAGGTAGTAA 59.405 47.826 6.62 0.00 31.70 2.24
593 2244 3.196300 ACTCCCCACTGTAGAGGTAGTA 58.804 50.000 6.62 0.00 31.70 1.82
594 2245 2.001558 ACTCCCCACTGTAGAGGTAGT 58.998 52.381 6.62 0.00 31.70 2.73
595 2246 2.830651 ACTCCCCACTGTAGAGGTAG 57.169 55.000 6.62 0.00 31.70 3.18
596 2247 3.334581 TGTTACTCCCCACTGTAGAGGTA 59.665 47.826 6.62 0.00 31.70 3.08
597 2248 2.111255 TGTTACTCCCCACTGTAGAGGT 59.889 50.000 6.62 0.00 31.70 3.85
598 2249 2.816411 TGTTACTCCCCACTGTAGAGG 58.184 52.381 6.62 0.00 31.70 3.69
599 2250 5.421056 TGTTATGTTACTCCCCACTGTAGAG 59.579 44.000 1.43 1.43 0.00 2.43
600 2251 5.335261 TGTTATGTTACTCCCCACTGTAGA 58.665 41.667 0.00 0.00 0.00 2.59
601 2252 5.670792 TGTTATGTTACTCCCCACTGTAG 57.329 43.478 0.00 0.00 0.00 2.74
602 2253 5.628200 GCATGTTATGTTACTCCCCACTGTA 60.628 44.000 0.00 0.00 0.00 2.74
603 2254 4.843728 CATGTTATGTTACTCCCCACTGT 58.156 43.478 0.00 0.00 0.00 3.55
604 2255 3.627577 GCATGTTATGTTACTCCCCACTG 59.372 47.826 0.00 0.00 0.00 3.66
605 2256 3.265737 TGCATGTTATGTTACTCCCCACT 59.734 43.478 0.00 0.00 0.00 4.00
606 2257 3.616219 TGCATGTTATGTTACTCCCCAC 58.384 45.455 0.00 0.00 0.00 4.61
607 2258 4.013728 GTTGCATGTTATGTTACTCCCCA 58.986 43.478 0.00 0.00 0.00 4.96
608 2259 4.013728 TGTTGCATGTTATGTTACTCCCC 58.986 43.478 0.00 0.00 0.00 4.81
609 2260 4.700213 AGTGTTGCATGTTATGTTACTCCC 59.300 41.667 0.00 0.00 0.00 4.30
610 2261 5.880054 AGTGTTGCATGTTATGTTACTCC 57.120 39.130 0.00 0.00 0.00 3.85
611 2262 6.898041 TGAAGTGTTGCATGTTATGTTACTC 58.102 36.000 0.00 0.00 0.00 2.59
612 2263 6.875948 TGAAGTGTTGCATGTTATGTTACT 57.124 33.333 0.00 0.00 0.00 2.24
613 2264 8.519492 AAATGAAGTGTTGCATGTTATGTTAC 57.481 30.769 0.00 0.00 0.00 2.50
615 2266 9.709495 AATAAATGAAGTGTTGCATGTTATGTT 57.291 25.926 0.00 0.00 0.00 2.71
619 2270 8.465999 CCCTAATAAATGAAGTGTTGCATGTTA 58.534 33.333 0.00 0.00 0.00 2.41
620 2271 7.039082 ACCCTAATAAATGAAGTGTTGCATGTT 60.039 33.333 0.00 0.00 0.00 2.71
621 2272 6.437162 ACCCTAATAAATGAAGTGTTGCATGT 59.563 34.615 0.00 0.00 0.00 3.21
622 2273 6.866480 ACCCTAATAAATGAAGTGTTGCATG 58.134 36.000 0.00 0.00 0.00 4.06
623 2274 8.766994 ATACCCTAATAAATGAAGTGTTGCAT 57.233 30.769 0.00 0.00 0.00 3.96
624 2275 9.337396 CTATACCCTAATAAATGAAGTGTTGCA 57.663 33.333 0.00 0.00 0.00 4.08
625 2276 9.555727 TCTATACCCTAATAAATGAAGTGTTGC 57.444 33.333 0.00 0.00 0.00 4.17
635 2286 9.726438 GCAAGATGTGTCTATACCCTAATAAAT 57.274 33.333 0.00 0.00 33.30 1.40
636 2287 8.154856 GGCAAGATGTGTCTATACCCTAATAAA 58.845 37.037 0.00 0.00 33.30 1.40
637 2288 7.291416 TGGCAAGATGTGTCTATACCCTAATAA 59.709 37.037 0.00 0.00 33.30 1.40
638 2289 6.785466 TGGCAAGATGTGTCTATACCCTAATA 59.215 38.462 0.00 0.00 33.30 0.98
639 2290 5.606749 TGGCAAGATGTGTCTATACCCTAAT 59.393 40.000 0.00 0.00 33.30 1.73
640 2291 4.966168 TGGCAAGATGTGTCTATACCCTAA 59.034 41.667 0.00 0.00 33.30 2.69
641 2292 4.552674 TGGCAAGATGTGTCTATACCCTA 58.447 43.478 0.00 0.00 33.30 3.53
642 2293 3.384168 TGGCAAGATGTGTCTATACCCT 58.616 45.455 0.00 0.00 33.30 4.34
643 2294 3.838244 TGGCAAGATGTGTCTATACCC 57.162 47.619 0.00 0.00 33.30 3.69
644 2295 4.960938 TCATGGCAAGATGTGTCTATACC 58.039 43.478 0.00 0.00 33.30 2.73
645 2296 7.821359 ACATATCATGGCAAGATGTGTCTATAC 59.179 37.037 23.57 0.00 41.92 1.47
646 2297 7.820872 CACATATCATGGCAAGATGTGTCTATA 59.179 37.037 25.55 1.71 43.18 1.31
647 2298 6.653740 CACATATCATGGCAAGATGTGTCTAT 59.346 38.462 25.55 7.95 43.18 1.98
648 2299 5.993441 CACATATCATGGCAAGATGTGTCTA 59.007 40.000 25.55 3.04 43.18 2.59
649 2300 4.820173 CACATATCATGGCAAGATGTGTCT 59.180 41.667 25.55 8.86 43.18 3.41
650 2301 5.104562 CACATATCATGGCAAGATGTGTC 57.895 43.478 25.55 0.00 43.18 3.67
653 2304 4.784177 TCACACATATCATGGCAAGATGT 58.216 39.130 15.03 5.81 33.60 3.06
654 2305 5.240844 ACATCACACATATCATGGCAAGATG 59.759 40.000 15.03 3.96 36.44 2.90
655 2306 5.382616 ACATCACACATATCATGGCAAGAT 58.617 37.500 10.37 10.37 33.60 2.40
656 2307 4.784177 ACATCACACATATCATGGCAAGA 58.216 39.130 0.00 0.00 33.60 3.02
657 2308 5.509716 AACATCACACATATCATGGCAAG 57.490 39.130 0.00 0.00 33.60 4.01
658 2309 5.884792 TGTAACATCACACATATCATGGCAA 59.115 36.000 0.00 0.00 33.60 4.52
659 2310 5.435291 TGTAACATCACACATATCATGGCA 58.565 37.500 0.00 0.00 33.60 4.92
660 2311 5.528690 ACTGTAACATCACACATATCATGGC 59.471 40.000 0.00 0.00 33.60 4.40
661 2312 8.551205 GTTACTGTAACATCACACATATCATGG 58.449 37.037 22.30 0.00 38.52 3.66
662 2313 9.317936 AGTTACTGTAACATCACACATATCATG 57.682 33.333 27.12 0.00 41.07 3.07
665 2316 8.969267 GCTAGTTACTGTAACATCACACATATC 58.031 37.037 27.12 5.73 41.07 1.63
666 2317 8.696374 AGCTAGTTACTGTAACATCACACATAT 58.304 33.333 27.12 9.43 41.07 1.78
667 2318 8.063200 AGCTAGTTACTGTAACATCACACATA 57.937 34.615 27.12 11.12 41.07 2.29
668 2319 6.936279 AGCTAGTTACTGTAACATCACACAT 58.064 36.000 27.12 10.64 41.07 3.21
669 2320 6.340962 AGCTAGTTACTGTAACATCACACA 57.659 37.500 27.12 7.11 41.07 3.72
670 2321 7.974501 ACATAGCTAGTTACTGTAACATCACAC 59.025 37.037 27.12 13.16 41.07 3.82
671 2322 8.063200 ACATAGCTAGTTACTGTAACATCACA 57.937 34.615 27.12 12.96 41.07 3.58
672 2323 8.928270 AACATAGCTAGTTACTGTAACATCAC 57.072 34.615 27.12 15.70 41.07 3.06
674 2325 9.460906 GGTAACATAGCTAGTTACTGTAACATC 57.539 37.037 27.12 16.94 46.49 3.06
675 2326 8.974238 TGGTAACATAGCTAGTTACTGTAACAT 58.026 33.333 27.12 16.67 46.49 2.71
676 2327 8.352137 TGGTAACATAGCTAGTTACTGTAACA 57.648 34.615 27.12 19.73 46.49 2.41
695 2346 5.009610 TGAAGAAAAAGAGGCATGTGGTAAC 59.990 40.000 0.00 0.00 0.00 2.50
696 2347 5.136828 TGAAGAAAAAGAGGCATGTGGTAA 58.863 37.500 0.00 0.00 0.00 2.85
697 2348 4.724399 TGAAGAAAAAGAGGCATGTGGTA 58.276 39.130 0.00 0.00 0.00 3.25
698 2349 3.565307 TGAAGAAAAAGAGGCATGTGGT 58.435 40.909 0.00 0.00 0.00 4.16
699 2350 4.796038 ATGAAGAAAAAGAGGCATGTGG 57.204 40.909 0.00 0.00 0.00 4.17
700 2351 8.767478 AATTAATGAAGAAAAAGAGGCATGTG 57.233 30.769 0.00 0.00 0.00 3.21
701 2352 9.860898 GTAATTAATGAAGAAAAAGAGGCATGT 57.139 29.630 0.00 0.00 0.00 3.21
702 2353 9.859427 TGTAATTAATGAAGAAAAAGAGGCATG 57.141 29.630 0.00 0.00 0.00 4.06
704 2355 9.859427 CATGTAATTAATGAAGAAAAAGAGGCA 57.141 29.630 0.00 0.00 0.00 4.75
705 2356 9.860898 ACATGTAATTAATGAAGAAAAAGAGGC 57.139 29.630 0.00 0.00 0.00 4.70
724 2375 9.671279 AGACAAAATAGATGATGTGACATGTAA 57.329 29.630 1.23 0.00 31.65 2.41
726 2377 9.322773 CTAGACAAAATAGATGATGTGACATGT 57.677 33.333 1.23 0.00 0.00 3.21
727 2378 9.538508 TCTAGACAAAATAGATGATGTGACATG 57.461 33.333 1.23 0.00 0.00 3.21
736 2387 9.421399 TCACACCTATCTAGACAAAATAGATGA 57.579 33.333 0.00 0.00 39.68 2.92
739 2390 9.201989 ACATCACACCTATCTAGACAAAATAGA 57.798 33.333 0.00 0.00 33.93 1.98
740 2391 9.823647 AACATCACACCTATCTAGACAAAATAG 57.176 33.333 0.00 0.00 0.00 1.73
742 2393 9.601217 GTAACATCACACCTATCTAGACAAAAT 57.399 33.333 0.00 0.00 0.00 1.82
743 2394 8.038944 GGTAACATCACACCTATCTAGACAAAA 58.961 37.037 0.00 0.00 0.00 2.44
744 2395 7.179516 TGGTAACATCACACCTATCTAGACAAA 59.820 37.037 0.00 0.00 46.17 2.83
745 2396 6.666113 TGGTAACATCACACCTATCTAGACAA 59.334 38.462 0.00 0.00 46.17 3.18
746 2397 6.192044 TGGTAACATCACACCTATCTAGACA 58.808 40.000 0.00 0.00 46.17 3.41
747 2398 6.710597 TGGTAACATCACACCTATCTAGAC 57.289 41.667 0.00 0.00 46.17 2.59
764 2415 8.234546 CACAATGAAAGTAACATAGGTGGTAAC 58.765 37.037 0.00 0.00 33.58 2.50
765 2416 7.392113 CCACAATGAAAGTAACATAGGTGGTAA 59.608 37.037 16.34 0.00 42.12 2.85
766 2417 6.882140 CCACAATGAAAGTAACATAGGTGGTA 59.118 38.462 16.34 0.00 42.12 3.25
767 2418 5.710099 CCACAATGAAAGTAACATAGGTGGT 59.290 40.000 16.34 0.00 42.12 4.16
768 2419 5.943416 TCCACAATGAAAGTAACATAGGTGG 59.057 40.000 17.51 17.51 44.83 4.61
769 2420 7.630242 ATCCACAATGAAAGTAACATAGGTG 57.370 36.000 0.00 0.00 35.23 4.00
770 2421 8.548877 ACTATCCACAATGAAAGTAACATAGGT 58.451 33.333 0.00 0.00 0.00 3.08
771 2422 8.964476 ACTATCCACAATGAAAGTAACATAGG 57.036 34.615 0.00 0.00 0.00 2.57
772 2423 9.823647 AGACTATCCACAATGAAAGTAACATAG 57.176 33.333 0.00 0.00 0.00 2.23
775 2426 9.653287 CTAAGACTATCCACAATGAAAGTAACA 57.347 33.333 0.00 0.00 0.00 2.41
776 2427 9.871238 TCTAAGACTATCCACAATGAAAGTAAC 57.129 33.333 0.00 0.00 0.00 2.50
779 2430 9.220767 GTTTCTAAGACTATCCACAATGAAAGT 57.779 33.333 0.00 0.00 0.00 2.66
780 2431 9.219603 TGTTTCTAAGACTATCCACAATGAAAG 57.780 33.333 0.00 0.00 0.00 2.62
781 2432 9.219603 CTGTTTCTAAGACTATCCACAATGAAA 57.780 33.333 0.00 0.00 0.00 2.69
782 2433 7.824289 CCTGTTTCTAAGACTATCCACAATGAA 59.176 37.037 0.00 0.00 0.00 2.57
783 2434 7.331026 CCTGTTTCTAAGACTATCCACAATGA 58.669 38.462 0.00 0.00 0.00 2.57
784 2435 6.540189 CCCTGTTTCTAAGACTATCCACAATG 59.460 42.308 0.00 0.00 0.00 2.82
785 2436 6.353082 CCCCTGTTTCTAAGACTATCCACAAT 60.353 42.308 0.00 0.00 0.00 2.71
786 2437 5.045869 CCCCTGTTTCTAAGACTATCCACAA 60.046 44.000 0.00 0.00 0.00 3.33
787 2438 4.469945 CCCCTGTTTCTAAGACTATCCACA 59.530 45.833 0.00 0.00 0.00 4.17
788 2439 4.715297 TCCCCTGTTTCTAAGACTATCCAC 59.285 45.833 0.00 0.00 0.00 4.02
789 2440 4.955335 TCCCCTGTTTCTAAGACTATCCA 58.045 43.478 0.00 0.00 0.00 3.41
790 2441 4.202274 GCTCCCCTGTTTCTAAGACTATCC 60.202 50.000 0.00 0.00 0.00 2.59
791 2442 4.406003 TGCTCCCCTGTTTCTAAGACTATC 59.594 45.833 0.00 0.00 0.00 2.08
792 2443 4.362677 TGCTCCCCTGTTTCTAAGACTAT 58.637 43.478 0.00 0.00 0.00 2.12
793 2444 3.786553 TGCTCCCCTGTTTCTAAGACTA 58.213 45.455 0.00 0.00 0.00 2.59
794 2445 2.621070 TGCTCCCCTGTTTCTAAGACT 58.379 47.619 0.00 0.00 0.00 3.24
795 2446 3.418684 TTGCTCCCCTGTTTCTAAGAC 57.581 47.619 0.00 0.00 0.00 3.01
796 2447 4.447138 TTTTGCTCCCCTGTTTCTAAGA 57.553 40.909 0.00 0.00 0.00 2.10
818 2469 8.035448 TCTCCTTTTCTTTCTTAGAGTCCTTT 57.965 34.615 0.00 0.00 33.51 3.11
867 2519 1.831106 AGATTTTTCCGCCCCATTTCC 59.169 47.619 0.00 0.00 0.00 3.13
1482 3151 0.545309 AGGAGCAGTAACAGAGGCCA 60.545 55.000 5.01 0.00 0.00 5.36
1977 3711 8.756927 TCATGCCAAGGAAAACATCAATAATAA 58.243 29.630 0.00 0.00 0.00 1.40
1978 3712 8.303780 TCATGCCAAGGAAAACATCAATAATA 57.696 30.769 0.00 0.00 0.00 0.98
1979 3713 7.185318 TCATGCCAAGGAAAACATCAATAAT 57.815 32.000 0.00 0.00 0.00 1.28
2115 4139 1.195442 TCATCAGGTGGTAACGGGCA 61.195 55.000 0.00 0.00 42.51 5.36
2302 4331 0.754957 CAAAGTGTCAGGGTGGGCAA 60.755 55.000 0.00 0.00 0.00 4.52
2307 4336 1.901591 AGATGCAAAGTGTCAGGGTG 58.098 50.000 0.00 0.00 0.00 4.61
2335 4364 3.550842 GCTGTGGAGAAAAACGCAAATCT 60.551 43.478 0.00 0.00 0.00 2.40
2470 4500 4.731503 GTCTGCGCGTTGCTGCTG 62.732 66.667 8.43 0.00 46.63 4.41
2473 4503 3.584250 CTTGGTCTGCGCGTTGCTG 62.584 63.158 8.43 3.26 46.63 4.41
2474 4504 3.349006 CTTGGTCTGCGCGTTGCT 61.349 61.111 8.43 0.00 46.63 3.91
2475 4505 3.300667 CTCTTGGTCTGCGCGTTGC 62.301 63.158 8.43 0.00 46.70 4.17
2476 4506 2.671177 CCTCTTGGTCTGCGCGTTG 61.671 63.158 8.43 0.25 0.00 4.10
2477 4507 2.357517 CCTCTTGGTCTGCGCGTT 60.358 61.111 8.43 0.00 0.00 4.84
2615 4645 7.132213 CGACAAAACAACACTAAACATGATCT 58.868 34.615 0.00 0.00 0.00 2.75
2790 4831 1.064060 CGCCACTTTATTACTGCTGGC 59.936 52.381 0.00 0.00 40.73 4.85
2791 4832 1.064060 GCGCCACTTTATTACTGCTGG 59.936 52.381 0.00 0.00 0.00 4.85
2792 4833 1.064060 GGCGCCACTTTATTACTGCTG 59.936 52.381 24.80 0.00 0.00 4.41
2793 4834 1.065418 AGGCGCCACTTTATTACTGCT 60.065 47.619 31.54 0.00 0.00 4.24
2811 4852 5.652014 TGGCACAACCTTTATTCTTCATAGG 59.348 40.000 0.00 0.00 40.22 2.57
2889 4935 1.697432 AGCAGGCAAGTTACCACTACA 59.303 47.619 0.00 0.00 30.68 2.74
2903 4952 2.603953 GAGCATGAAAAAGAAGCAGGC 58.396 47.619 0.00 0.00 39.38 4.85
2905 4954 2.559668 TGGGAGCATGAAAAAGAAGCAG 59.440 45.455 0.00 0.00 0.00 4.24
2907 4956 3.429960 GGATGGGAGCATGAAAAAGAAGC 60.430 47.826 0.00 0.00 0.00 3.86
2908 4957 3.181493 CGGATGGGAGCATGAAAAAGAAG 60.181 47.826 0.00 0.00 0.00 2.85
2910 4959 2.290896 ACGGATGGGAGCATGAAAAAGA 60.291 45.455 0.00 0.00 0.00 2.52
2913 4962 1.462616 CACGGATGGGAGCATGAAAA 58.537 50.000 0.00 0.00 0.00 2.29
2914 4963 1.031571 GCACGGATGGGAGCATGAAA 61.032 55.000 0.00 0.00 0.00 2.69
2915 4964 1.451927 GCACGGATGGGAGCATGAA 60.452 57.895 0.00 0.00 0.00 2.57
2917 4966 1.442526 GAAGCACGGATGGGAGCATG 61.443 60.000 0.00 0.00 0.00 4.06
2918 4967 1.153086 GAAGCACGGATGGGAGCAT 60.153 57.895 0.00 0.00 0.00 3.79
2919 4968 2.268920 GAAGCACGGATGGGAGCA 59.731 61.111 0.00 0.00 0.00 4.26
2920 4969 2.514824 GGAAGCACGGATGGGAGC 60.515 66.667 0.00 0.00 0.00 4.70
2921 4970 1.144936 GAGGAAGCACGGATGGGAG 59.855 63.158 0.00 0.00 0.00 4.30
2922 4971 0.982852 ATGAGGAAGCACGGATGGGA 60.983 55.000 0.00 0.00 0.00 4.37
2923 4972 0.758734 TATGAGGAAGCACGGATGGG 59.241 55.000 0.00 0.00 0.00 4.00
2928 4977 1.586422 CCATGTATGAGGAAGCACGG 58.414 55.000 0.00 0.00 0.00 4.94
2929 4978 0.940126 GCCATGTATGAGGAAGCACG 59.060 55.000 0.00 0.00 0.00 5.34
2930 4979 1.133976 AGGCCATGTATGAGGAAGCAC 60.134 52.381 5.01 0.00 0.00 4.40
2931 4980 1.141657 GAGGCCATGTATGAGGAAGCA 59.858 52.381 5.01 0.00 0.00 3.91
2932 4981 1.419387 AGAGGCCATGTATGAGGAAGC 59.581 52.381 5.01 0.00 0.00 3.86
2933 4982 3.135348 TCAAGAGGCCATGTATGAGGAAG 59.865 47.826 5.01 0.00 0.00 3.46
2934 4983 3.114606 TCAAGAGGCCATGTATGAGGAA 58.885 45.455 5.01 0.00 0.00 3.36
2935 4984 2.763039 TCAAGAGGCCATGTATGAGGA 58.237 47.619 5.01 0.00 0.00 3.71
2936 4985 3.565764 TTCAAGAGGCCATGTATGAGG 57.434 47.619 5.01 0.00 0.00 3.86
2937 4986 4.774124 TCTTTCAAGAGGCCATGTATGAG 58.226 43.478 5.01 0.00 0.00 2.90
2938 4987 4.842531 TCTTTCAAGAGGCCATGTATGA 57.157 40.909 5.01 0.00 0.00 2.15
2939 4988 5.902613 TTTCTTTCAAGAGGCCATGTATG 57.097 39.130 5.01 0.00 36.22 2.39
2940 4989 8.593945 TTATTTTCTTTCAAGAGGCCATGTAT 57.406 30.769 5.01 0.00 36.22 2.29
2941 4990 7.362920 GCTTATTTTCTTTCAAGAGGCCATGTA 60.363 37.037 5.01 0.00 36.22 2.29
2942 4991 6.573094 GCTTATTTTCTTTCAAGAGGCCATGT 60.573 38.462 5.01 0.00 36.22 3.21
2943 4992 5.809051 GCTTATTTTCTTTCAAGAGGCCATG 59.191 40.000 5.01 0.27 36.22 3.66
2944 4993 5.105187 GGCTTATTTTCTTTCAAGAGGCCAT 60.105 40.000 5.01 0.00 36.22 4.40
2945 4994 4.220602 GGCTTATTTTCTTTCAAGAGGCCA 59.779 41.667 5.01 0.00 36.22 5.36
2946 4995 4.382040 GGGCTTATTTTCTTTCAAGAGGCC 60.382 45.833 0.00 0.00 36.22 5.19
2947 4996 4.382040 GGGGCTTATTTTCTTTCAAGAGGC 60.382 45.833 0.00 0.00 36.22 4.70
2948 4997 4.142381 CGGGGCTTATTTTCTTTCAAGAGG 60.142 45.833 0.00 0.00 36.22 3.69
2949 4998 4.142381 CCGGGGCTTATTTTCTTTCAAGAG 60.142 45.833 0.00 0.00 36.22 2.85
2950 4999 3.761752 CCGGGGCTTATTTTCTTTCAAGA 59.238 43.478 0.00 0.00 0.00 3.02
2951 5000 3.509967 ACCGGGGCTTATTTTCTTTCAAG 59.490 43.478 6.32 0.00 0.00 3.02
2952 5001 3.502356 ACCGGGGCTTATTTTCTTTCAA 58.498 40.909 6.32 0.00 0.00 2.69
2953 5002 3.086282 GACCGGGGCTTATTTTCTTTCA 58.914 45.455 6.32 0.00 0.00 2.69
2954 5003 2.426024 GGACCGGGGCTTATTTTCTTTC 59.574 50.000 6.32 0.00 0.00 2.62
2955 5004 2.453521 GGACCGGGGCTTATTTTCTTT 58.546 47.619 6.32 0.00 0.00 2.52
2956 5005 1.341679 GGGACCGGGGCTTATTTTCTT 60.342 52.381 6.32 0.00 0.00 2.52
2957 5006 0.257905 GGGACCGGGGCTTATTTTCT 59.742 55.000 6.32 0.00 0.00 2.52
2958 5007 0.033894 TGGGACCGGGGCTTATTTTC 60.034 55.000 6.32 0.00 0.00 2.29
2959 5008 0.634465 ATGGGACCGGGGCTTATTTT 59.366 50.000 6.32 0.00 0.00 1.82
2960 5009 0.634465 AATGGGACCGGGGCTTATTT 59.366 50.000 6.32 0.00 0.00 1.40
2961 5010 0.185175 GAATGGGACCGGGGCTTATT 59.815 55.000 6.32 0.35 0.00 1.40
2962 5011 1.716028 GGAATGGGACCGGGGCTTAT 61.716 60.000 6.32 0.00 0.00 1.73
2963 5012 2.380285 GGAATGGGACCGGGGCTTA 61.380 63.158 6.32 0.00 0.00 3.09
2964 5013 3.739613 GGAATGGGACCGGGGCTT 61.740 66.667 6.32 0.00 0.00 4.35
2967 5016 3.809013 CAGGGAATGGGACCGGGG 61.809 72.222 6.32 0.00 0.00 5.73
2968 5017 1.858739 TTTCAGGGAATGGGACCGGG 61.859 60.000 6.32 0.00 0.00 5.73
2969 5018 0.039035 TTTTCAGGGAATGGGACCGG 59.961 55.000 0.00 0.00 0.00 5.28
2970 5019 2.024414 GATTTTCAGGGAATGGGACCG 58.976 52.381 0.00 0.00 0.00 4.79
2971 5020 3.026694 CTGATTTTCAGGGAATGGGACC 58.973 50.000 0.00 0.00 40.71 4.46
2988 5037 9.175577 TCTTTTCTAATCTAATCATCCCCTGAT 57.824 33.333 0.00 0.00 46.87 2.90
2989 5038 8.567198 TCTTTTCTAATCTAATCATCCCCTGA 57.433 34.615 0.00 0.00 38.53 3.86
2990 5039 9.632638 TTTCTTTTCTAATCTAATCATCCCCTG 57.367 33.333 0.00 0.00 0.00 4.45
3021 5070 5.531287 ACTTCATCTTACGGCTGTTCTTTTT 59.469 36.000 1.99 0.00 0.00 1.94
3022 5071 5.049405 CACTTCATCTTACGGCTGTTCTTTT 60.049 40.000 1.99 0.00 0.00 2.27
3023 5072 4.452455 CACTTCATCTTACGGCTGTTCTTT 59.548 41.667 1.99 0.00 0.00 2.52
3024 5073 3.997021 CACTTCATCTTACGGCTGTTCTT 59.003 43.478 1.99 0.00 0.00 2.52
3025 5074 3.258372 TCACTTCATCTTACGGCTGTTCT 59.742 43.478 1.99 0.00 0.00 3.01
3026 5075 3.585862 TCACTTCATCTTACGGCTGTTC 58.414 45.455 1.99 0.00 0.00 3.18
3027 5076 3.258372 TCTCACTTCATCTTACGGCTGTT 59.742 43.478 1.99 0.00 0.00 3.16
3028 5077 2.826128 TCTCACTTCATCTTACGGCTGT 59.174 45.455 2.42 2.42 0.00 4.40
3029 5078 3.443037 CTCTCACTTCATCTTACGGCTG 58.557 50.000 0.00 0.00 0.00 4.85
3030 5079 2.159170 GCTCTCACTTCATCTTACGGCT 60.159 50.000 0.00 0.00 0.00 5.52
3031 5080 2.197577 GCTCTCACTTCATCTTACGGC 58.802 52.381 0.00 0.00 0.00 5.68
3032 5081 3.182967 GTGCTCTCACTTCATCTTACGG 58.817 50.000 0.00 0.00 40.03 4.02
3033 5082 2.848887 CGTGCTCTCACTTCATCTTACG 59.151 50.000 0.00 0.00 40.99 3.18
3034 5083 3.119459 TCCGTGCTCTCACTTCATCTTAC 60.119 47.826 0.00 0.00 40.99 2.34
3035 5084 3.089284 TCCGTGCTCTCACTTCATCTTA 58.911 45.455 0.00 0.00 40.99 2.10
3036 5085 1.895798 TCCGTGCTCTCACTTCATCTT 59.104 47.619 0.00 0.00 40.99 2.40
3037 5086 1.550327 TCCGTGCTCTCACTTCATCT 58.450 50.000 0.00 0.00 40.99 2.90
3038 5087 2.200067 CATCCGTGCTCTCACTTCATC 58.800 52.381 0.00 0.00 40.99 2.92
3039 5088 2.306341 CATCCGTGCTCTCACTTCAT 57.694 50.000 0.00 0.00 40.99 2.57
3040 5089 3.820595 CATCCGTGCTCTCACTTCA 57.179 52.632 0.00 0.00 40.99 3.02
3051 5100 1.002142 CAAGCCATGTATGCATCCGTG 60.002 52.381 0.19 2.87 31.99 4.94
3052 5101 1.134128 TCAAGCCATGTATGCATCCGT 60.134 47.619 0.19 0.00 31.99 4.69
3053 5102 1.596603 TCAAGCCATGTATGCATCCG 58.403 50.000 0.19 0.00 31.99 4.18
3054 5103 4.038282 TCAAATCAAGCCATGTATGCATCC 59.962 41.667 0.19 0.00 31.99 3.51
3055 5104 5.190992 TCAAATCAAGCCATGTATGCATC 57.809 39.130 0.19 0.00 31.99 3.91
3056 5105 5.801531 ATCAAATCAAGCCATGTATGCAT 57.198 34.783 3.79 3.79 35.32 3.96
3057 5106 5.353111 CAATCAAATCAAGCCATGTATGCA 58.647 37.500 0.00 0.00 0.00 3.96
3058 5107 4.748102 CCAATCAAATCAAGCCATGTATGC 59.252 41.667 0.00 0.00 0.00 3.14
3059 5108 6.151663 TCCAATCAAATCAAGCCATGTATG 57.848 37.500 0.00 0.00 0.00 2.39
3060 5109 6.608405 TCTTCCAATCAAATCAAGCCATGTAT 59.392 34.615 0.00 0.00 0.00 2.29
3061 5110 5.951148 TCTTCCAATCAAATCAAGCCATGTA 59.049 36.000 0.00 0.00 0.00 2.29
3062 5111 4.773674 TCTTCCAATCAAATCAAGCCATGT 59.226 37.500 0.00 0.00 0.00 3.21
3063 5112 5.333299 TCTTCCAATCAAATCAAGCCATG 57.667 39.130 0.00 0.00 0.00 3.66
3064 5113 6.363167 TTTCTTCCAATCAAATCAAGCCAT 57.637 33.333 0.00 0.00 0.00 4.40
3065 5114 5.804944 TTTCTTCCAATCAAATCAAGCCA 57.195 34.783 0.00 0.00 0.00 4.75
3066 5115 8.776376 TTATTTTCTTCCAATCAAATCAAGCC 57.224 30.769 0.00 0.00 0.00 4.35
3067 5116 8.876790 CCTTATTTTCTTCCAATCAAATCAAGC 58.123 33.333 0.00 0.00 0.00 4.01
3068 5117 9.933723 ACCTTATTTTCTTCCAATCAAATCAAG 57.066 29.630 0.00 0.00 0.00 3.02
3069 5118 9.927668 GACCTTATTTTCTTCCAATCAAATCAA 57.072 29.630 0.00 0.00 0.00 2.57
3070 5119 8.531146 GGACCTTATTTTCTTCCAATCAAATCA 58.469 33.333 0.00 0.00 0.00 2.57
3071 5120 7.702348 CGGACCTTATTTTCTTCCAATCAAATC 59.298 37.037 0.00 0.00 0.00 2.17
3072 5121 7.363793 CCGGACCTTATTTTCTTCCAATCAAAT 60.364 37.037 0.00 0.00 0.00 2.32
3073 5122 6.071616 CCGGACCTTATTTTCTTCCAATCAAA 60.072 38.462 0.00 0.00 0.00 2.69
3074 5123 5.417580 CCGGACCTTATTTTCTTCCAATCAA 59.582 40.000 0.00 0.00 0.00 2.57
3075 5124 4.947388 CCGGACCTTATTTTCTTCCAATCA 59.053 41.667 0.00 0.00 0.00 2.57
3076 5125 4.202020 GCCGGACCTTATTTTCTTCCAATC 60.202 45.833 5.05 0.00 0.00 2.67
3077 5126 3.699538 GCCGGACCTTATTTTCTTCCAAT 59.300 43.478 5.05 0.00 0.00 3.16
3078 5127 3.086282 GCCGGACCTTATTTTCTTCCAA 58.914 45.455 5.05 0.00 0.00 3.53
3079 5128 2.040545 TGCCGGACCTTATTTTCTTCCA 59.959 45.455 5.05 0.00 0.00 3.53
3080 5129 2.422479 GTGCCGGACCTTATTTTCTTCC 59.578 50.000 5.05 0.00 0.00 3.46
3081 5130 2.422479 GGTGCCGGACCTTATTTTCTTC 59.578 50.000 5.05 0.00 42.25 2.87
3082 5131 2.224917 TGGTGCCGGACCTTATTTTCTT 60.225 45.455 19.61 0.00 46.32 2.52
3083 5132 1.353022 TGGTGCCGGACCTTATTTTCT 59.647 47.619 19.61 0.00 46.32 2.52
3084 5133 1.471287 GTGGTGCCGGACCTTATTTTC 59.529 52.381 19.61 0.00 46.32 2.29
3085 5134 1.074889 AGTGGTGCCGGACCTTATTTT 59.925 47.619 19.61 2.11 46.32 1.82
3086 5135 0.696501 AGTGGTGCCGGACCTTATTT 59.303 50.000 19.61 3.43 46.32 1.40
3087 5136 0.252197 GAGTGGTGCCGGACCTTATT 59.748 55.000 19.61 6.72 46.32 1.40
3088 5137 1.623542 GGAGTGGTGCCGGACCTTAT 61.624 60.000 19.61 8.88 46.32 1.73
3089 5138 2.288025 GGAGTGGTGCCGGACCTTA 61.288 63.158 19.61 2.77 46.32 2.69
3090 5139 3.637273 GGAGTGGTGCCGGACCTT 61.637 66.667 19.61 10.81 46.32 3.50
3091 5140 4.640690 AGGAGTGGTGCCGGACCT 62.641 66.667 19.61 7.57 46.32 3.85
3092 5141 3.637273 AAGGAGTGGTGCCGGACC 61.637 66.667 5.05 11.15 46.37 4.46
3093 5142 2.358737 CAAGGAGTGGTGCCGGAC 60.359 66.667 5.05 0.00 0.00 4.79
3094 5143 1.701031 TTTCAAGGAGTGGTGCCGGA 61.701 55.000 5.05 0.00 0.00 5.14
3095 5144 0.821711 TTTTCAAGGAGTGGTGCCGG 60.822 55.000 0.00 0.00 0.00 6.13
3096 5145 1.200020 GATTTTCAAGGAGTGGTGCCG 59.800 52.381 0.00 0.00 0.00 5.69
3097 5146 2.238521 TGATTTTCAAGGAGTGGTGCC 58.761 47.619 0.00 0.00 0.00 5.01
3154 5203 5.238650 CCCACTTCATCTTACGACTGTTTTT 59.761 40.000 0.00 0.00 0.00 1.94
3155 5204 4.755123 CCCACTTCATCTTACGACTGTTTT 59.245 41.667 0.00 0.00 0.00 2.43
3156 5205 4.039973 TCCCACTTCATCTTACGACTGTTT 59.960 41.667 0.00 0.00 0.00 2.83
3157 5206 3.576982 TCCCACTTCATCTTACGACTGTT 59.423 43.478 0.00 0.00 0.00 3.16
3158 5207 3.162666 TCCCACTTCATCTTACGACTGT 58.837 45.455 0.00 0.00 0.00 3.55
3159 5208 3.775202 CTCCCACTTCATCTTACGACTG 58.225 50.000 0.00 0.00 0.00 3.51
3160 5209 2.166664 GCTCCCACTTCATCTTACGACT 59.833 50.000 0.00 0.00 0.00 4.18
3161 5210 2.094182 TGCTCCCACTTCATCTTACGAC 60.094 50.000 0.00 0.00 0.00 4.34
3162 5211 2.094182 GTGCTCCCACTTCATCTTACGA 60.094 50.000 0.00 0.00 38.93 3.43
3163 5212 2.271800 GTGCTCCCACTTCATCTTACG 58.728 52.381 0.00 0.00 38.93 3.18
3164 5213 3.334583 TGTGCTCCCACTTCATCTTAC 57.665 47.619 0.00 0.00 42.54 2.34
3165 5214 5.455183 CCATATGTGCTCCCACTTCATCTTA 60.455 44.000 1.24 0.00 42.54 2.10
3166 5215 4.458397 CATATGTGCTCCCACTTCATCTT 58.542 43.478 0.00 0.00 42.54 2.40
3167 5216 3.181447 CCATATGTGCTCCCACTTCATCT 60.181 47.826 1.24 0.00 42.54 2.90
3168 5217 3.144506 CCATATGTGCTCCCACTTCATC 58.855 50.000 1.24 0.00 42.54 2.92
3169 5218 2.750807 GCCATATGTGCTCCCACTTCAT 60.751 50.000 1.24 0.00 42.54 2.57
3170 5219 1.408683 GCCATATGTGCTCCCACTTCA 60.409 52.381 1.24 0.00 42.54 3.02
3171 5220 1.312815 GCCATATGTGCTCCCACTTC 58.687 55.000 1.24 0.00 42.54 3.01
3172 5221 0.625316 TGCCATATGTGCTCCCACTT 59.375 50.000 14.63 0.00 42.54 3.16
3173 5222 0.182061 CTGCCATATGTGCTCCCACT 59.818 55.000 14.63 0.00 42.54 4.00
3174 5223 1.450531 GCTGCCATATGTGCTCCCAC 61.451 60.000 14.63 0.00 42.40 4.61
3175 5224 1.152902 GCTGCCATATGTGCTCCCA 60.153 57.895 14.63 0.00 0.00 4.37
3176 5225 0.538977 ATGCTGCCATATGTGCTCCC 60.539 55.000 14.63 6.23 0.00 4.30
3177 5226 0.596577 CATGCTGCCATATGTGCTCC 59.403 55.000 14.63 8.02 0.00 4.70
3178 5227 0.596577 CCATGCTGCCATATGTGCTC 59.403 55.000 14.63 8.80 0.00 4.26
3179 5228 0.184211 TCCATGCTGCCATATGTGCT 59.816 50.000 14.63 0.00 0.00 4.40
3180 5229 0.596577 CTCCATGCTGCCATATGTGC 59.403 55.000 1.24 5.66 0.00 4.57
3181 5230 2.152016 CTCTCCATGCTGCCATATGTG 58.848 52.381 1.24 0.00 0.00 3.21
3182 5231 1.073444 CCTCTCCATGCTGCCATATGT 59.927 52.381 1.24 0.00 0.00 2.29
3183 5232 1.613520 CCCTCTCCATGCTGCCATATG 60.614 57.143 0.00 0.00 0.00 1.78
3184 5233 0.697079 CCCTCTCCATGCTGCCATAT 59.303 55.000 0.00 0.00 0.00 1.78
3185 5234 0.400381 TCCCTCTCCATGCTGCCATA 60.400 55.000 0.00 0.00 0.00 2.74
3186 5235 1.695239 TCCCTCTCCATGCTGCCAT 60.695 57.895 0.00 0.00 0.00 4.40
3187 5236 2.285592 TCCCTCTCCATGCTGCCA 60.286 61.111 0.00 0.00 0.00 4.92
3188 5237 2.509916 CTCCCTCTCCATGCTGCC 59.490 66.667 0.00 0.00 0.00 4.85
3189 5238 2.203181 GCTCCCTCTCCATGCTGC 60.203 66.667 0.00 0.00 0.00 5.25
3190 5239 1.146485 CTGCTCCCTCTCCATGCTG 59.854 63.158 0.00 0.00 0.00 4.41
3191 5240 2.071262 CCTGCTCCCTCTCCATGCT 61.071 63.158 0.00 0.00 0.00 3.79
3192 5241 2.509916 CCTGCTCCCTCTCCATGC 59.490 66.667 0.00 0.00 0.00 4.06
3193 5242 1.918467 TTGCCTGCTCCCTCTCCATG 61.918 60.000 0.00 0.00 0.00 3.66
3194 5243 1.617536 TTGCCTGCTCCCTCTCCAT 60.618 57.895 0.00 0.00 0.00 3.41
3195 5244 2.203983 TTGCCTGCTCCCTCTCCA 60.204 61.111 0.00 0.00 0.00 3.86
3196 5245 2.588989 CTTGCCTGCTCCCTCTCC 59.411 66.667 0.00 0.00 0.00 3.71
3197 5246 2.124778 GCTTGCCTGCTCCCTCTC 60.125 66.667 0.00 0.00 0.00 3.20
3198 5247 3.726144 GGCTTGCCTGCTCCCTCT 61.726 66.667 4.11 0.00 0.00 3.69
3202 5251 4.496336 ATCCGGCTTGCCTGCTCC 62.496 66.667 10.12 0.00 0.00 4.70
3203 5252 2.899339 GATCCGGCTTGCCTGCTC 60.899 66.667 10.12 0.76 0.00 4.26
3204 5253 4.496336 GGATCCGGCTTGCCTGCT 62.496 66.667 10.12 0.00 0.00 4.24
3205 5254 2.680974 TATGGATCCGGCTTGCCTGC 62.681 60.000 7.39 0.00 0.00 4.85
3206 5255 0.037303 ATATGGATCCGGCTTGCCTG 59.963 55.000 7.39 3.29 0.00 4.85
3207 5256 0.773644 AATATGGATCCGGCTTGCCT 59.226 50.000 7.39 0.00 0.00 4.75
3208 5257 1.270550 CAAATATGGATCCGGCTTGCC 59.729 52.381 7.39 0.75 0.00 4.52
3209 5258 2.712057 CAAATATGGATCCGGCTTGC 57.288 50.000 7.39 0.00 0.00 4.01
3221 5270 4.034048 GTGCTGTACTCCGAACCAAATATG 59.966 45.833 0.00 0.00 0.00 1.78
3222 5271 4.189231 GTGCTGTACTCCGAACCAAATAT 58.811 43.478 0.00 0.00 0.00 1.28
3223 5272 3.592059 GTGCTGTACTCCGAACCAAATA 58.408 45.455 0.00 0.00 0.00 1.40
3224 5273 2.423577 GTGCTGTACTCCGAACCAAAT 58.576 47.619 0.00 0.00 0.00 2.32
3225 5274 1.870580 CGTGCTGTACTCCGAACCAAA 60.871 52.381 0.00 0.00 0.00 3.28
3380 5430 3.535629 TTGTCCGTGAGCAGGCAGG 62.536 63.158 0.00 0.00 0.00 4.85
3381 5431 2.031012 TTGTCCGTGAGCAGGCAG 59.969 61.111 0.00 0.00 0.00 4.85
3382 5432 2.031012 CTTGTCCGTGAGCAGGCA 59.969 61.111 0.00 0.00 0.00 4.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.