Multiple sequence alignment - TraesCS5D01G132600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G132600 chr5D 100.000 8722 0 0 1 8722 211206154 211214875 0.000000e+00 16107.0
1 TraesCS5D01G132600 chr5D 100.000 195 0 0 8071 8265 211214032 211214226 2.310000e-95 361.0
2 TraesCS5D01G132600 chr5D 100.000 195 0 0 7879 8073 211214224 211214418 2.310000e-95 361.0
3 TraesCS5D01G132600 chr5D 96.491 57 2 0 147 203 285828038 285827982 2.590000e-15 95.3
4 TraesCS5D01G132600 chr5A 91.982 3405 120 50 146 3470 274780424 274783755 0.000000e+00 4634.0
5 TraesCS5D01G132600 chr5A 95.794 1712 34 11 5269 6955 274785360 274787058 0.000000e+00 2728.0
6 TraesCS5D01G132600 chr5A 96.394 1331 44 4 3858 5187 274784034 274785361 0.000000e+00 2189.0
7 TraesCS5D01G132600 chr5A 96.814 973 25 5 6953 7923 274787825 274788793 0.000000e+00 1620.0
8 TraesCS5D01G132600 chr5A 95.054 465 18 3 8261 8722 274789150 274789612 0.000000e+00 726.0
9 TraesCS5D01G132600 chr5A 93.262 282 8 4 3501 3771 274783755 274784036 1.050000e-108 405.0
10 TraesCS5D01G132600 chr5A 83.333 264 38 4 180 437 311007076 311006813 1.130000e-58 239.0
11 TraesCS5D01G132600 chr5A 98.780 82 1 0 7916 7997 274788821 274788902 7.060000e-31 147.0
12 TraesCS5D01G132600 chr5A 98.780 82 1 0 8108 8189 274788821 274788902 7.060000e-31 147.0
13 TraesCS5D01G132600 chr5A 94.624 93 5 0 5186 5278 38014705 38014613 2.540000e-30 145.0
14 TraesCS5D01G132600 chr5A 96.491 57 2 0 7916 7972 274788973 274789029 2.590000e-15 95.3
15 TraesCS5D01G132600 chr5A 96.491 57 2 0 8108 8164 274788973 274789029 2.590000e-15 95.3
16 TraesCS5D01G132600 chr5B 94.055 2826 97 22 146 2942 225095537 225098320 0.000000e+00 4222.0
17 TraesCS5D01G132600 chr5B 96.150 2260 53 17 2943 5187 225099893 225102133 0.000000e+00 3661.0
18 TraesCS5D01G132600 chr5B 96.805 1690 46 6 6237 7923 225102939 225104623 0.000000e+00 2815.0
19 TraesCS5D01G132600 chr5B 97.778 810 12 5 5269 6076 225102132 225102937 0.000000e+00 1391.0
20 TraesCS5D01G132600 chr5B 97.198 464 11 1 8261 8722 225105001 225105464 0.000000e+00 784.0
21 TraesCS5D01G132600 chr5B 92.537 134 8 2 1 133 702611940 702611808 3.210000e-44 191.0
22 TraesCS5D01G132600 chr5B 90.345 145 12 2 1 144 702630487 702630344 1.160000e-43 189.0
23 TraesCS5D01G132600 chr5B 90.278 144 12 2 2 144 702808122 702807980 4.160000e-43 187.0
24 TraesCS5D01G132600 chr5B 91.304 138 9 3 1 137 702652063 702651928 1.500000e-42 185.0
25 TraesCS5D01G132600 chr5B 90.210 143 10 2 7916 8058 225104651 225104789 5.380000e-42 183.0
26 TraesCS5D01G132600 chr5B 90.210 143 10 2 8108 8250 225104651 225104789 5.380000e-42 183.0
27 TraesCS5D01G132600 chr5B 90.647 139 10 3 1 138 702762719 702762583 1.930000e-41 182.0
28 TraesCS5D01G132600 chr5B 96.629 89 3 0 5186 5274 711237882 711237970 1.960000e-31 148.0
29 TraesCS5D01G132600 chr5B 91.089 101 8 1 5170 5270 677875964 677876063 1.530000e-27 135.0
30 TraesCS5D01G132600 chr5B 97.778 45 1 0 8071 8115 225104579 225104623 2.610000e-10 78.7
31 TraesCS5D01G132600 chr5B 100.000 34 0 0 8264 8297 225104856 225104889 7.310000e-06 63.9
32 TraesCS5D01G132600 chr7D 98.662 299 3 1 7625 7923 610228711 610228414 6.000000e-146 529.0
33 TraesCS5D01G132600 chr7D 92.453 159 11 1 6079 6237 397554920 397555077 8.810000e-55 226.0
34 TraesCS5D01G132600 chr7D 91.971 137 11 0 9 145 305084589 305084725 8.940000e-45 193.0
35 TraesCS5D01G132600 chr7D 81.301 246 33 10 197 437 329293678 329293915 4.160000e-43 187.0
36 TraesCS5D01G132600 chr7D 94.737 95 3 1 5176 5270 626199877 626199969 7.060000e-31 147.0
37 TraesCS5D01G132600 chr7D 100.000 45 0 0 8071 8115 610228458 610228414 5.610000e-12 84.2
38 TraesCS5D01G132600 chr6B 85.141 249 25 10 193 434 314195606 314195849 2.430000e-60 244.0
39 TraesCS5D01G132600 chr6B 92.453 159 11 1 6079 6237 481857855 481858012 8.810000e-55 226.0
40 TraesCS5D01G132600 chr6B 94.624 93 4 1 5179 5271 218219334 218219425 9.130000e-30 143.0
41 TraesCS5D01G132600 chr6B 91.089 101 9 0 5171 5271 96970745 96970845 4.250000e-28 137.0
42 TraesCS5D01G132600 chr6D 93.711 159 9 1 6079 6237 338408561 338408404 4.070000e-58 237.0
43 TraesCS5D01G132600 chr1D 85.903 227 22 7 192 412 191484998 191485220 5.260000e-57 233.0
44 TraesCS5D01G132600 chr1D 91.358 162 12 2 6076 6237 225704944 225704785 4.100000e-53 220.0
45 TraesCS5D01G132600 chr7A 83.077 260 32 9 158 409 409883101 409882846 8.810000e-55 226.0
46 TraesCS5D01G132600 chr7A 80.408 245 41 5 197 437 343138687 343138446 6.960000e-41 180.0
47 TraesCS5D01G132600 chr3A 89.503 181 15 3 6060 6238 600921032 600920854 8.810000e-55 226.0
48 TraesCS5D01G132600 chr4D 91.875 160 12 1 6079 6238 64390628 64390470 1.140000e-53 222.0
49 TraesCS5D01G132600 chr4D 90.511 137 13 0 8 144 193768420 193768556 1.930000e-41 182.0
50 TraesCS5D01G132600 chr4D 93.000 100 7 0 5186 5285 449455616 449455715 7.060000e-31 147.0
51 TraesCS5D01G132600 chr2D 88.889 180 15 4 6063 6240 296364222 296364046 5.300000e-52 217.0
52 TraesCS5D01G132600 chr2D 93.684 95 6 0 5179 5273 204417077 204417171 9.130000e-30 143.0
53 TraesCS5D01G132600 chr2B 88.889 180 15 4 6063 6240 366017506 366017682 5.300000e-52 217.0
54 TraesCS5D01G132600 chr3D 86.813 182 15 7 158 332 197875930 197876109 2.480000e-45 195.0
55 TraesCS5D01G132600 chr4B 90.511 137 13 0 9 145 482993192 482993056 1.930000e-41 182.0
56 TraesCS5D01G132600 chr4A 88.889 144 16 0 1 144 221194603 221194460 2.500000e-40 178.0
57 TraesCS5D01G132600 chr3B 91.589 107 7 1 5172 5278 334313056 334313160 7.060000e-31 147.0
58 TraesCS5D01G132600 chr1A 97.872 47 1 0 158 204 209047478 209047432 2.020000e-11 82.4
59 TraesCS5D01G132600 chr2A 88.462 52 6 0 4001 4052 771487286 771487337 7.310000e-06 63.9
60 TraesCS5D01G132600 chr2A 88.462 52 6 0 4001 4052 771489010 771489061 7.310000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G132600 chr5D 211206154 211214875 8721 False 5609.666667 16107 100.0000 1 8722 3 chr5D.!!$F1 8721
1 TraesCS5D01G132600 chr5A 274780424 274789612 9188 False 1278.660000 4634 95.9842 146 8722 10 chr5A.!!$F1 8576
2 TraesCS5D01G132600 chr5B 225095537 225105464 9927 False 1486.844444 4222 95.5760 146 8722 9 chr5B.!!$F3 8576

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
98 99 0.096976 GAATGACATGGCAACGACGG 59.903 55.000 4.70 0.00 42.51 4.79 F
137 138 0.178068 TAGAGCATCGGTCTTTGGGC 59.822 55.000 0.46 0.00 40.94 5.36 F
1367 1396 0.533308 AAAACTGTTGCCGCGGAGTA 60.533 50.000 33.48 11.76 0.00 2.59 F
1368 1397 1.226030 AAACTGTTGCCGCGGAGTAC 61.226 55.000 33.48 22.41 0.00 2.73 F
1381 1420 1.694639 GGAGTACGTTCCAGTGTTCG 58.305 55.000 0.00 0.00 37.20 3.95 F
1541 1580 2.224079 TGCTCACTCGATTTTGAACTGC 59.776 45.455 0.00 0.00 0.00 4.40 F
1679 1718 2.346766 TCCAAGAAACTGAGCTTGCA 57.653 45.000 0.00 0.00 40.02 4.08 F
3483 5184 0.469917 ACAGCTGTGTGTAAGCCTGT 59.530 50.000 20.97 0.00 41.82 4.00 F
3989 5701 1.631071 TTCACAGGCAGGACACACCA 61.631 55.000 0.00 0.00 42.04 4.17 F
5206 6926 3.136641 ACTCCCTCAGTCCCATAATGT 57.863 47.619 0.00 0.00 0.00 2.71 F
5267 6987 1.424638 ACATTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30 F
6600 8345 0.463654 ACTGTCGGTGCACATTGTGT 60.464 50.000 20.43 8.61 35.75 3.72 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1497 1536 0.107017 TAAGCCTGCTGATTGCCCTC 60.107 55.000 0.0 0.0 42.00 4.30 R
1621 1660 1.537202 GCAAGCGTCCAGAACAAGAAT 59.463 47.619 0.0 0.0 0.00 2.40 R
3362 5041 1.278985 CAGGGCTGTATGGTGTGAAGA 59.721 52.381 0.0 0.0 0.00 2.87 R
3418 5097 0.251608 GCTAAACTTGGGGGAAGGCA 60.252 55.000 0.0 0.0 35.78 4.75 R
3470 5171 5.105473 TCAGATACCTTACAGGCTTACACAC 60.105 44.000 0.0 0.0 39.63 3.82 R
3477 5178 4.290093 TGTGATCAGATACCTTACAGGCT 58.710 43.478 0.0 0.0 39.63 4.58 R
3662 5363 4.572389 CCGCTATTGCTTGTCTACAGAAAT 59.428 41.667 0.0 0.0 36.97 2.17 R
5255 6975 0.033306 ACTTCTACTCCCTCCGTCCC 60.033 60.000 0.0 0.0 0.00 4.46 R
5259 6979 1.275291 TGCAAACTTCTACTCCCTCCG 59.725 52.381 0.0 0.0 0.00 4.63 R
6227 7965 1.783979 TCCTCCTCATCTACTCCCTCC 59.216 57.143 0.0 0.0 0.00 4.30 R
6623 8368 1.883638 GCATGACCCAAAGCTCTGACA 60.884 52.381 0.0 0.0 0.00 3.58 R
8185 10779 0.112995 TTCCTGTCATTTGGCTGGCT 59.887 50.000 2.0 0.0 38.45 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.587388 CAACTATGGATGGATGCAAGTTT 57.413 39.130 0.00 0.00 32.17 2.66
23 24 5.969423 CAACTATGGATGGATGCAAGTTTT 58.031 37.500 0.00 0.00 32.17 2.43
24 25 5.587388 ACTATGGATGGATGCAAGTTTTG 57.413 39.130 0.00 0.00 0.00 2.44
25 26 5.263599 ACTATGGATGGATGCAAGTTTTGA 58.736 37.500 0.00 0.00 0.00 2.69
26 27 5.716228 ACTATGGATGGATGCAAGTTTTGAA 59.284 36.000 0.00 0.00 0.00 2.69
27 28 4.952071 TGGATGGATGCAAGTTTTGAAA 57.048 36.364 0.00 0.00 0.00 2.69
28 29 5.287674 TGGATGGATGCAAGTTTTGAAAA 57.712 34.783 0.00 0.00 0.00 2.29
29 30 5.678583 TGGATGGATGCAAGTTTTGAAAAA 58.321 33.333 0.00 0.00 0.00 1.94
30 31 5.526846 TGGATGGATGCAAGTTTTGAAAAAC 59.473 36.000 10.07 10.07 46.54 2.43
44 45 8.204182 GTTTTGAAAAACGTGTAGATGAGATG 57.796 34.615 3.10 0.00 38.89 2.90
45 46 5.530519 TGAAAAACGTGTAGATGAGATGC 57.469 39.130 0.00 0.00 0.00 3.91
46 47 4.994217 TGAAAAACGTGTAGATGAGATGCA 59.006 37.500 0.00 0.00 0.00 3.96
47 48 4.928661 AAAACGTGTAGATGAGATGCAC 57.071 40.909 0.00 0.00 0.00 4.57
48 49 3.592898 AACGTGTAGATGAGATGCACA 57.407 42.857 0.00 0.00 0.00 4.57
49 50 3.808466 ACGTGTAGATGAGATGCACAT 57.192 42.857 0.00 0.00 0.00 3.21
50 51 3.451526 ACGTGTAGATGAGATGCACATG 58.548 45.455 0.00 0.00 33.38 3.21
51 52 3.131046 ACGTGTAGATGAGATGCACATGA 59.869 43.478 0.00 0.00 31.94 3.07
52 53 4.202192 ACGTGTAGATGAGATGCACATGAT 60.202 41.667 0.00 0.00 31.94 2.45
53 54 4.150098 CGTGTAGATGAGATGCACATGATG 59.850 45.833 0.00 0.00 0.00 3.07
54 55 5.295152 GTGTAGATGAGATGCACATGATGA 58.705 41.667 0.00 0.00 0.00 2.92
55 56 5.177142 GTGTAGATGAGATGCACATGATGAC 59.823 44.000 0.00 0.00 0.00 3.06
56 57 4.417426 AGATGAGATGCACATGATGACA 57.583 40.909 0.00 0.00 0.00 3.58
57 58 4.974399 AGATGAGATGCACATGATGACAT 58.026 39.130 0.00 2.24 37.19 3.06
67 68 2.536365 CATGATGACATGGCAAAGTGC 58.464 47.619 4.70 0.00 46.95 4.40
68 69 2.094442 CATGATGACATGGCAAAGTGCA 60.094 45.455 4.70 0.00 46.95 4.57
69 70 3.615351 CATGATGACATGGCAAAGTGCAA 60.615 43.478 4.70 0.00 46.95 4.08
70 71 5.669481 CATGATGACATGGCAAAGTGCAAC 61.669 45.833 4.70 0.00 46.95 4.17
83 84 3.548201 TGCAACACACAAGCGAATG 57.452 47.368 0.00 0.00 0.00 2.67
84 85 1.020437 TGCAACACACAAGCGAATGA 58.980 45.000 0.00 0.00 0.00 2.57
85 86 1.268488 TGCAACACACAAGCGAATGAC 60.268 47.619 0.00 0.00 0.00 3.06
86 87 1.268488 GCAACACACAAGCGAATGACA 60.268 47.619 0.00 0.00 0.00 3.58
87 88 2.605338 GCAACACACAAGCGAATGACAT 60.605 45.455 0.00 0.00 0.00 3.06
88 89 2.975193 CAACACACAAGCGAATGACATG 59.025 45.455 0.00 0.00 0.00 3.21
89 90 1.536766 ACACACAAGCGAATGACATGG 59.463 47.619 0.00 0.00 0.00 3.66
90 91 0.523072 ACACAAGCGAATGACATGGC 59.477 50.000 0.00 0.00 0.00 4.40
91 92 0.522626 CACAAGCGAATGACATGGCA 59.477 50.000 2.18 2.18 0.00 4.92
92 93 1.068402 CACAAGCGAATGACATGGCAA 60.068 47.619 4.70 0.00 0.00 4.52
93 94 1.068333 ACAAGCGAATGACATGGCAAC 60.068 47.619 4.70 1.62 0.00 4.17
94 95 0.168788 AAGCGAATGACATGGCAACG 59.831 50.000 21.68 21.68 42.51 4.10
95 96 0.673333 AGCGAATGACATGGCAACGA 60.673 50.000 27.45 0.00 42.51 3.85
96 97 0.521242 GCGAATGACATGGCAACGAC 60.521 55.000 27.45 17.64 42.51 4.34
97 98 0.247262 CGAATGACATGGCAACGACG 60.247 55.000 21.53 13.67 42.51 5.12
98 99 0.096976 GAATGACATGGCAACGACGG 59.903 55.000 4.70 0.00 42.51 4.79
99 100 0.605319 AATGACATGGCAACGACGGT 60.605 50.000 4.70 0.00 42.51 4.83
100 101 1.298157 ATGACATGGCAACGACGGTG 61.298 55.000 4.70 8.96 42.51 4.94
101 102 1.666553 GACATGGCAACGACGGTGA 60.667 57.895 18.96 0.00 42.51 4.02
102 103 1.225376 GACATGGCAACGACGGTGAA 61.225 55.000 18.96 3.83 42.51 3.18
103 104 0.605319 ACATGGCAACGACGGTGAAT 60.605 50.000 18.96 6.37 42.51 2.57
104 105 1.338294 ACATGGCAACGACGGTGAATA 60.338 47.619 18.96 1.47 42.51 1.75
105 106 1.735018 CATGGCAACGACGGTGAATAA 59.265 47.619 18.96 0.00 42.51 1.40
106 107 1.880271 TGGCAACGACGGTGAATAAA 58.120 45.000 18.96 0.00 42.51 1.40
107 108 1.532007 TGGCAACGACGGTGAATAAAC 59.468 47.619 18.96 0.00 42.51 2.01
108 109 1.462869 GGCAACGACGGTGAATAAACG 60.463 52.381 18.96 0.00 0.00 3.60
109 110 1.462869 GCAACGACGGTGAATAAACGG 60.463 52.381 18.96 0.00 0.00 4.44
110 111 2.060284 CAACGACGGTGAATAAACGGA 58.940 47.619 7.21 0.00 0.00 4.69
111 112 2.437200 ACGACGGTGAATAAACGGAA 57.563 45.000 0.00 0.00 0.00 4.30
112 113 2.331194 ACGACGGTGAATAAACGGAAG 58.669 47.619 0.00 0.00 0.00 3.46
113 114 2.030007 ACGACGGTGAATAAACGGAAGA 60.030 45.455 0.00 0.00 0.00 2.87
114 115 2.343544 CGACGGTGAATAAACGGAAGAC 59.656 50.000 0.00 0.00 0.00 3.01
115 116 3.319755 GACGGTGAATAAACGGAAGACA 58.680 45.455 0.00 0.00 0.00 3.41
116 117 3.930848 GACGGTGAATAAACGGAAGACAT 59.069 43.478 0.00 0.00 0.00 3.06
117 118 3.930848 ACGGTGAATAAACGGAAGACATC 59.069 43.478 0.00 0.00 0.00 3.06
118 119 4.181578 CGGTGAATAAACGGAAGACATCT 58.818 43.478 0.00 0.00 0.00 2.90
119 120 5.105635 ACGGTGAATAAACGGAAGACATCTA 60.106 40.000 0.00 0.00 0.00 1.98
120 121 5.459107 CGGTGAATAAACGGAAGACATCTAG 59.541 44.000 0.00 0.00 0.00 2.43
121 122 6.570692 GGTGAATAAACGGAAGACATCTAGA 58.429 40.000 0.00 0.00 0.00 2.43
122 123 6.697892 GGTGAATAAACGGAAGACATCTAGAG 59.302 42.308 0.00 0.00 0.00 2.43
123 124 6.199342 GTGAATAAACGGAAGACATCTAGAGC 59.801 42.308 0.00 0.00 0.00 4.09
124 125 5.854010 ATAAACGGAAGACATCTAGAGCA 57.146 39.130 0.00 0.00 0.00 4.26
125 126 4.744795 AAACGGAAGACATCTAGAGCAT 57.255 40.909 0.00 0.00 0.00 3.79
126 127 4.314740 AACGGAAGACATCTAGAGCATC 57.685 45.455 0.00 0.00 0.00 3.91
127 128 2.292016 ACGGAAGACATCTAGAGCATCG 59.708 50.000 0.00 0.00 42.67 3.84
128 129 2.351253 CGGAAGACATCTAGAGCATCGG 60.351 54.545 0.00 0.00 42.67 4.18
129 130 2.625790 GGAAGACATCTAGAGCATCGGT 59.374 50.000 0.00 0.00 42.67 4.69
130 131 3.305064 GGAAGACATCTAGAGCATCGGTC 60.305 52.174 0.00 0.00 42.67 4.79
131 132 3.222173 AGACATCTAGAGCATCGGTCT 57.778 47.619 0.00 0.93 43.16 3.85
132 133 3.561143 AGACATCTAGAGCATCGGTCTT 58.439 45.455 0.00 0.00 40.94 3.01
133 134 3.957497 AGACATCTAGAGCATCGGTCTTT 59.043 43.478 0.00 0.00 40.94 2.52
134 135 4.047822 GACATCTAGAGCATCGGTCTTTG 58.952 47.826 0.00 1.06 40.94 2.77
135 136 3.181471 ACATCTAGAGCATCGGTCTTTGG 60.181 47.826 0.00 0.00 40.94 3.28
136 137 1.757118 TCTAGAGCATCGGTCTTTGGG 59.243 52.381 0.46 0.00 40.94 4.12
137 138 0.178068 TAGAGCATCGGTCTTTGGGC 59.822 55.000 0.46 0.00 40.94 5.36
138 139 2.436646 AGCATCGGTCTTTGGGCG 60.437 61.111 0.00 0.00 0.00 6.13
139 140 2.746277 GCATCGGTCTTTGGGCGT 60.746 61.111 0.00 0.00 0.00 5.68
140 141 2.750888 GCATCGGTCTTTGGGCGTC 61.751 63.158 0.00 0.00 0.00 5.19
141 142 1.375396 CATCGGTCTTTGGGCGTCA 60.375 57.895 0.00 0.00 0.00 4.35
142 143 1.375523 ATCGGTCTTTGGGCGTCAC 60.376 57.895 0.00 0.00 0.00 3.67
143 144 2.107041 ATCGGTCTTTGGGCGTCACA 62.107 55.000 0.00 0.00 0.00 3.58
144 145 1.890041 CGGTCTTTGGGCGTCACAA 60.890 57.895 0.00 0.00 0.00 3.33
176 177 3.194968 GTCGGAGTTCAAGACCTCCATTA 59.805 47.826 13.19 0.00 35.84 1.90
177 178 3.447586 TCGGAGTTCAAGACCTCCATTAG 59.552 47.826 13.19 0.00 35.84 1.73
227 228 5.548181 TCTCTCCATGAGATTTGGATGAG 57.452 43.478 0.00 10.42 46.03 2.90
278 279 4.712829 TGTTTTTGGATCATGATGCATCCT 59.287 37.500 27.76 11.64 38.92 3.24
300 301 7.112122 TCCTATGTATTGCTTGTGATTTGAGT 58.888 34.615 0.00 0.00 0.00 3.41
302 303 8.338259 CCTATGTATTGCTTGTGATTTGAGTAC 58.662 37.037 0.00 0.00 0.00 2.73
304 305 7.744087 TGTATTGCTTGTGATTTGAGTACTT 57.256 32.000 0.00 0.00 0.00 2.24
305 306 7.584108 TGTATTGCTTGTGATTTGAGTACTTG 58.416 34.615 0.00 0.00 0.00 3.16
306 307 6.882610 ATTGCTTGTGATTTGAGTACTTGA 57.117 33.333 0.00 0.00 0.00 3.02
334 338 8.352942 GTGAATCTTGTCCAATAAAGTGTTTCT 58.647 33.333 0.00 0.00 0.00 2.52
351 355 7.046652 AGTGTTTCTCCTTGTGATATCTCATG 58.953 38.462 8.23 10.21 32.98 3.07
354 358 7.550551 TGTTTCTCCTTGTGATATCTCATGTTC 59.449 37.037 8.23 0.37 32.98 3.18
362 366 5.240403 TGTGATATCTCATGTTCTCCTCTCG 59.760 44.000 3.98 0.00 32.98 4.04
367 371 3.574396 TCTCATGTTCTCCTCTCGTGTTT 59.426 43.478 0.00 0.00 0.00 2.83
370 374 4.511454 TCATGTTCTCCTCTCGTGTTTTTG 59.489 41.667 0.00 0.00 0.00 2.44
385 389 2.946990 GTTTTTGGTGTTCCTCCTCGAA 59.053 45.455 0.00 0.00 34.23 3.71
390 394 1.486726 GGTGTTCCTCCTCGAATCCAT 59.513 52.381 0.00 0.00 0.00 3.41
393 397 2.432146 TGTTCCTCCTCGAATCCATCTG 59.568 50.000 0.00 0.00 0.00 2.90
413 417 1.406539 GCAATTCATGAACATCGGGCT 59.593 47.619 11.07 0.00 0.00 5.19
427 431 0.616891 CGGGCTACCTAGGGTTTTGT 59.383 55.000 14.81 0.00 37.09 2.83
497 501 4.942761 ATGTTTTGATGTTTGAGTGCCT 57.057 36.364 0.00 0.00 0.00 4.75
503 507 4.305989 TGATGTTTGAGTGCCTTGTTTC 57.694 40.909 0.00 0.00 0.00 2.78
522 526 0.962356 CAGGGCCGCTGTTGAAGATT 60.962 55.000 11.85 0.00 0.00 2.40
892 921 1.336517 CGAACCTTCTAGAACACGCCA 60.337 52.381 0.00 0.00 0.00 5.69
1334 1363 3.994392 CGCGATGGTTAATGGCTAGTATT 59.006 43.478 0.00 0.00 37.83 1.89
1364 1393 1.240256 ATAAAAACTGTTGCCGCGGA 58.760 45.000 33.48 11.82 0.00 5.54
1366 1395 1.381165 AAAAACTGTTGCCGCGGAGT 61.381 50.000 33.48 21.13 0.00 3.85
1367 1396 0.533308 AAAACTGTTGCCGCGGAGTA 60.533 50.000 33.48 11.76 0.00 2.59
1368 1397 1.226030 AAACTGTTGCCGCGGAGTAC 61.226 55.000 33.48 22.41 0.00 2.73
1381 1420 1.694639 GGAGTACGTTCCAGTGTTCG 58.305 55.000 0.00 0.00 37.20 3.95
1465 1504 3.874392 ATTTTTGCTGGGGAATTCGAG 57.126 42.857 0.00 0.00 0.00 4.04
1497 1536 7.429633 AGATTTTATCTACAGTCATGTCGAGG 58.570 38.462 0.00 0.00 41.01 4.63
1541 1580 2.224079 TGCTCACTCGATTTTGAACTGC 59.776 45.455 0.00 0.00 0.00 4.40
1659 1698 5.980715 CGCTTGCCCTTTACTTTTTCTTTTA 59.019 36.000 0.00 0.00 0.00 1.52
1679 1718 2.346766 TCCAAGAAACTGAGCTTGCA 57.653 45.000 0.00 0.00 40.02 4.08
1905 1944 2.884639 CCTGGGCCAGTTAATTATTCCG 59.115 50.000 30.68 8.14 0.00 4.30
2177 2217 3.500448 TTGGCTAGTGGATGTTGTTGA 57.500 42.857 0.00 0.00 0.00 3.18
2409 2477 2.547211 CAGGTGACTTGTGAAGCTTGAG 59.453 50.000 2.10 0.00 40.21 3.02
2451 2519 4.142071 TGTGAAGCATGTTTGTTTGGCTAA 60.142 37.500 0.00 0.00 33.80 3.09
2461 2529 3.433306 TGTTTGGCTAATACAGTGCCT 57.567 42.857 0.00 0.00 46.23 4.75
2568 2667 9.950496 ATATTTCTACTCATCTCTCTCTCTCTC 57.050 37.037 0.00 0.00 0.00 3.20
2569 2668 7.437713 TTTCTACTCATCTCTCTCTCTCTCT 57.562 40.000 0.00 0.00 0.00 3.10
2570 2669 6.656632 TCTACTCATCTCTCTCTCTCTCTC 57.343 45.833 0.00 0.00 0.00 3.20
2571 2670 6.377080 TCTACTCATCTCTCTCTCTCTCTCT 58.623 44.000 0.00 0.00 0.00 3.10
2572 2671 5.543507 ACTCATCTCTCTCTCTCTCTCTC 57.456 47.826 0.00 0.00 0.00 3.20
2573 2672 5.215069 ACTCATCTCTCTCTCTCTCTCTCT 58.785 45.833 0.00 0.00 0.00 3.10
2574 2673 5.304101 ACTCATCTCTCTCTCTCTCTCTCTC 59.696 48.000 0.00 0.00 0.00 3.20
2575 2674 5.462240 TCATCTCTCTCTCTCTCTCTCTCT 58.538 45.833 0.00 0.00 0.00 3.10
2576 2675 5.538053 TCATCTCTCTCTCTCTCTCTCTCTC 59.462 48.000 0.00 0.00 0.00 3.20
2577 2676 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
2578 2677 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2579 2678 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2580 2679 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2581 2680 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2582 2681 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2583 2682 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2584 2683 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2585 2684 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2586 2685 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2613 2712 6.848364 TACATGTTTGTCCCAAGCATTAATGC 60.848 38.462 29.21 29.21 44.36 3.56
2674 2773 6.126409 TGTGGAATTTACTCTCAACTTTGGT 58.874 36.000 0.00 0.00 0.00 3.67
2762 2861 5.010213 GGTGATGATCTCTCTGTAAGGTACC 59.990 48.000 2.73 2.73 0.00 3.34
2883 2982 9.956640 AAAGATATCTTCTGTTGTCTTCATTCT 57.043 29.630 18.19 0.00 34.61 2.40
2884 2983 9.956640 AAGATATCTTCTGTTGTCTTCATTCTT 57.043 29.630 12.37 0.00 33.93 2.52
2885 2984 9.956640 AGATATCTTCTGTTGTCTTCATTCTTT 57.043 29.630 0.00 0.00 31.79 2.52
2908 3007 5.242795 ACTAAGGCTGTGGTTCTTTACAT 57.757 39.130 0.00 0.00 0.00 2.29
2946 4617 6.506538 AGGATAGCTTTACATTCATGGACT 57.493 37.500 0.00 0.00 0.00 3.85
3115 4787 3.196463 CTCTTGCATCTGCTAGTTCCAG 58.804 50.000 12.22 0.95 42.89 3.86
3286 4965 5.278660 GCCTTCCTTATATGTTTGCATCCTG 60.279 44.000 0.00 0.00 36.58 3.86
3290 4969 4.763793 CCTTATATGTTTGCATCCTGAGGG 59.236 45.833 0.00 0.00 36.58 4.30
3346 5025 3.277142 TCTGACTAGGCACGTCTGATA 57.723 47.619 0.00 0.00 35.38 2.15
3352 5031 5.580691 TGACTAGGCACGTCTGATATTTTTG 59.419 40.000 0.00 0.00 32.70 2.44
3418 5097 9.232882 TCCTCAAACTACCCCTATTAAACATAT 57.767 33.333 0.00 0.00 0.00 1.78
3436 5115 2.532250 ATGCCTTCCCCCAAGTTTAG 57.468 50.000 0.00 0.00 0.00 1.85
3470 5171 4.115516 ACACGCTTCAGATATTACAGCTG 58.884 43.478 13.48 13.48 42.27 4.24
3471 5172 4.115516 CACGCTTCAGATATTACAGCTGT 58.884 43.478 25.12 25.12 41.59 4.40
3472 5173 4.026228 CACGCTTCAGATATTACAGCTGTG 60.026 45.833 29.57 10.74 41.59 3.66
3473 5174 4.115516 CGCTTCAGATATTACAGCTGTGT 58.884 43.478 29.57 19.19 41.59 3.72
3474 5175 4.026228 CGCTTCAGATATTACAGCTGTGTG 60.026 45.833 29.57 15.33 41.59 3.82
3475 5176 4.872691 GCTTCAGATATTACAGCTGTGTGT 59.127 41.667 29.57 15.53 41.59 3.72
3476 5177 6.042777 GCTTCAGATATTACAGCTGTGTGTA 58.957 40.000 29.57 17.92 41.59 2.90
3477 5178 6.535150 GCTTCAGATATTACAGCTGTGTGTAA 59.465 38.462 29.57 15.76 44.86 2.41
3478 5179 7.254252 GCTTCAGATATTACAGCTGTGTGTAAG 60.254 40.741 29.57 19.16 44.18 2.34
3479 5180 6.042777 TCAGATATTACAGCTGTGTGTAAGC 58.957 40.000 29.57 12.34 44.18 3.09
3480 5181 5.235186 CAGATATTACAGCTGTGTGTAAGCC 59.765 44.000 29.57 10.29 44.18 4.35
3481 5182 3.703001 ATTACAGCTGTGTGTAAGCCT 57.297 42.857 29.57 0.00 44.18 4.58
3482 5183 2.455674 TACAGCTGTGTGTAAGCCTG 57.544 50.000 29.57 0.00 41.82 4.85
3483 5184 0.469917 ACAGCTGTGTGTAAGCCTGT 59.530 50.000 20.97 0.00 41.82 4.00
3484 5185 1.691976 ACAGCTGTGTGTAAGCCTGTA 59.308 47.619 20.97 0.00 41.82 2.74
3485 5186 2.104111 ACAGCTGTGTGTAAGCCTGTAA 59.896 45.455 20.97 0.00 41.82 2.41
3486 5187 2.738846 CAGCTGTGTGTAAGCCTGTAAG 59.261 50.000 5.25 0.00 41.82 2.34
3487 5188 8.900601 TTACAGCTGTGTGTAAGCCTGTAAGG 62.901 46.154 29.57 0.00 46.30 2.69
3723 5432 4.420741 GGGGGCCAACCTCTCTAT 57.579 61.111 4.39 0.00 36.49 1.98
3724 5433 2.634100 GGGGGCCAACCTCTCTATT 58.366 57.895 4.39 0.00 36.49 1.73
3772 5484 5.342791 GCAAATAACACAAAATGGCAATTGC 59.657 36.000 22.47 22.47 41.14 3.56
3797 5509 3.881688 CAGAATTAATGGCTGACCCTCAG 59.118 47.826 11.32 0.00 46.90 3.35
3989 5701 1.631071 TTCACAGGCAGGACACACCA 61.631 55.000 0.00 0.00 42.04 4.17
4059 5771 3.620966 GCTCCTTAGTCAGGTCAGCAATT 60.621 47.826 0.28 0.00 44.37 2.32
4111 5823 4.463070 ACGTTTTTAACTTCCCTGCCTTA 58.537 39.130 0.00 0.00 0.00 2.69
4159 5871 4.510038 AGCATCAATCTTTTCACGCTTT 57.490 36.364 0.00 0.00 0.00 3.51
5154 6874 5.631096 GCTTGAAGCATCTGTTTTAAGGAAC 59.369 40.000 13.09 0.00 41.89 3.62
5195 6915 9.790344 ATCATTCAAAAATAGATACTCCCTCAG 57.210 33.333 0.00 0.00 0.00 3.35
5196 6916 8.772250 TCATTCAAAAATAGATACTCCCTCAGT 58.228 33.333 0.00 0.00 39.41 3.41
5197 6917 9.050601 CATTCAAAAATAGATACTCCCTCAGTC 57.949 37.037 0.00 0.00 36.43 3.51
5198 6918 7.125792 TCAAAAATAGATACTCCCTCAGTCC 57.874 40.000 0.00 0.00 36.43 3.85
5199 6919 6.099845 TCAAAAATAGATACTCCCTCAGTCCC 59.900 42.308 0.00 0.00 36.43 4.46
5200 6920 4.834406 AATAGATACTCCCTCAGTCCCA 57.166 45.455 0.00 0.00 36.43 4.37
5201 6921 5.361630 AATAGATACTCCCTCAGTCCCAT 57.638 43.478 0.00 0.00 36.43 4.00
5202 6922 6.485388 AATAGATACTCCCTCAGTCCCATA 57.515 41.667 0.00 0.00 36.43 2.74
5203 6923 4.834406 AGATACTCCCTCAGTCCCATAA 57.166 45.455 0.00 0.00 36.43 1.90
5204 6924 5.361630 AGATACTCCCTCAGTCCCATAAT 57.638 43.478 0.00 0.00 36.43 1.28
5205 6925 5.090139 AGATACTCCCTCAGTCCCATAATG 58.910 45.833 0.00 0.00 36.43 1.90
5206 6926 3.136641 ACTCCCTCAGTCCCATAATGT 57.863 47.619 0.00 0.00 0.00 2.71
5207 6927 4.280789 ACTCCCTCAGTCCCATAATGTA 57.719 45.455 0.00 0.00 0.00 2.29
5208 6928 4.631234 ACTCCCTCAGTCCCATAATGTAA 58.369 43.478 0.00 0.00 0.00 2.41
5209 6929 4.656112 ACTCCCTCAGTCCCATAATGTAAG 59.344 45.833 0.00 0.00 0.00 2.34
5210 6930 4.890988 TCCCTCAGTCCCATAATGTAAGA 58.109 43.478 0.00 0.00 0.00 2.10
5211 6931 4.654262 TCCCTCAGTCCCATAATGTAAGAC 59.346 45.833 0.00 0.00 0.00 3.01
5212 6932 4.501571 CCCTCAGTCCCATAATGTAAGACG 60.502 50.000 0.00 0.00 32.70 4.18
5213 6933 4.099573 CCTCAGTCCCATAATGTAAGACGT 59.900 45.833 0.00 0.00 32.70 4.34
5214 6934 5.395324 CCTCAGTCCCATAATGTAAGACGTT 60.395 44.000 0.00 0.00 32.70 3.99
5215 6935 6.045072 TCAGTCCCATAATGTAAGACGTTT 57.955 37.500 0.00 0.00 32.70 3.60
5216 6936 6.469410 TCAGTCCCATAATGTAAGACGTTTT 58.531 36.000 0.00 0.00 32.70 2.43
5217 6937 6.938030 TCAGTCCCATAATGTAAGACGTTTTT 59.062 34.615 0.00 0.00 32.70 1.94
5236 6956 5.607939 TTTTTGACTCCAGTCTAGTGTCA 57.392 39.130 8.19 0.00 44.99 3.58
5237 6957 5.607939 TTTTGACTCCAGTCTAGTGTCAA 57.392 39.130 10.58 10.58 44.99 3.18
5238 6958 5.607939 TTTGACTCCAGTCTAGTGTCAAA 57.392 39.130 18.53 18.53 46.86 2.69
5239 6959 5.607939 TTGACTCCAGTCTAGTGTCAAAA 57.392 39.130 11.79 0.00 41.91 2.44
5240 6960 5.607939 TGACTCCAGTCTAGTGTCAAAAA 57.392 39.130 8.19 0.00 44.99 1.94
5262 6982 3.720949 CGTCTTACATTATGGGACGGA 57.279 47.619 20.50 2.30 43.69 4.69
5263 6983 3.639538 CGTCTTACATTATGGGACGGAG 58.360 50.000 20.50 2.74 43.69 4.63
5264 6984 3.552273 CGTCTTACATTATGGGACGGAGG 60.552 52.174 20.50 5.87 43.69 4.30
5265 6985 2.969950 TCTTACATTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
5266 6986 2.779429 TACATTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
5267 6987 1.424638 ACATTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
6083 7821 4.464947 AGAAATTATGCTTGCTACCCTCC 58.535 43.478 0.00 0.00 0.00 4.30
6103 7841 6.869388 CCCTCCGCTTCTAAATATAAGTCTTC 59.131 42.308 0.00 0.00 0.00 2.87
6234 7972 7.396418 AGACTTATACTTAGATACGGAGGGAG 58.604 42.308 0.00 0.00 0.00 4.30
6235 7973 7.017452 AGACTTATACTTAGATACGGAGGGAGT 59.983 40.741 0.00 0.00 0.00 3.85
6254 7992 4.837860 GGAGTAGATGAGGAGGATGATGTT 59.162 45.833 0.00 0.00 0.00 2.71
6597 8342 1.665679 GGATACTGTCGGTGCACATTG 59.334 52.381 20.43 7.94 0.00 2.82
6598 8343 2.346803 GATACTGTCGGTGCACATTGT 58.653 47.619 20.43 11.63 0.00 2.71
6599 8344 1.507562 TACTGTCGGTGCACATTGTG 58.492 50.000 20.43 12.54 36.51 3.33
6600 8345 0.463654 ACTGTCGGTGCACATTGTGT 60.464 50.000 20.43 8.61 35.75 3.72
6601 8346 0.662619 CTGTCGGTGCACATTGTGTT 59.337 50.000 20.43 0.00 35.75 3.32
6602 8347 1.065401 CTGTCGGTGCACATTGTGTTT 59.935 47.619 20.43 0.00 35.75 2.83
6623 8368 6.611642 TGTTTATCTAGGTGCTCCTATCTGTT 59.388 38.462 14.73 2.48 44.30 3.16
6672 8417 8.293867 TGCATGTTGTATTTTTACCAAGACTAC 58.706 33.333 0.00 0.00 0.00 2.73
6837 8588 9.099454 GATCTACTCAAACCAACCTAAGTTATG 57.901 37.037 0.00 0.00 33.27 1.90
7043 9565 7.970102 TCATACTCACAACTACTAAAGGGTTT 58.030 34.615 0.00 0.00 0.00 3.27
7234 9758 7.540745 ACCAAACGCAAATAGTTGATTAATCAC 59.459 33.333 17.76 12.56 36.83 3.06
7257 9781 5.181690 TGCAGTTGTTAAGGTTGTTGATC 57.818 39.130 0.00 0.00 0.00 2.92
7568 10092 1.000955 AGAAGTTCAGGTACGTGCAGG 59.999 52.381 10.71 4.53 0.00 4.85
7573 10097 1.485124 TCAGGTACGTGCAGGATCAT 58.515 50.000 14.38 0.27 0.00 2.45
7616 10140 9.327731 AGAAAGATACCCCTTACCAGATATAAG 57.672 37.037 0.00 0.00 0.00 1.73
7688 10212 2.213499 ACTTCAGGTGAAACGAGCAAG 58.787 47.619 0.00 0.00 38.12 4.01
7830 10354 9.658475 TTTTGTTATGTACAATTTGAAGAGTCG 57.342 29.630 0.00 0.00 45.72 4.18
7835 10359 7.730364 ATGTACAATTTGAAGAGTCGTCTTT 57.270 32.000 0.00 0.00 43.50 2.52
7842 10366 0.321996 AAGAGTCGTCTTTGGGCCTC 59.678 55.000 4.53 0.00 40.35 4.70
7998 10557 4.154918 GTCTTTTCTGGTGAATACAGCCAG 59.845 45.833 3.61 3.61 42.95 4.85
7999 10558 2.113860 TTCTGGTGAATACAGCCAGC 57.886 50.000 5.05 0.00 42.95 4.85
8001 10560 0.035152 CTGGTGAATACAGCCAGCCA 60.035 55.000 0.00 0.00 42.95 4.75
8006 10565 2.754552 GTGAATACAGCCAGCCAAATGA 59.245 45.455 0.00 0.00 0.00 2.57
8008 10567 2.512692 ATACAGCCAGCCAAATGACA 57.487 45.000 0.00 0.00 0.00 3.58
8018 10577 3.446161 CAGCCAAATGACAGGAATCATGT 59.554 43.478 0.00 0.00 39.32 3.21
8021 10580 5.012354 AGCCAAATGACAGGAATCATGTTTT 59.988 36.000 1.00 0.00 39.32 2.43
8022 10581 6.211184 AGCCAAATGACAGGAATCATGTTTTA 59.789 34.615 1.00 0.00 39.32 1.52
8058 10617 3.012518 GCAGTGCTATTGAGTTCCATGT 58.987 45.455 8.18 0.00 0.00 3.21
8059 10618 3.441572 GCAGTGCTATTGAGTTCCATGTT 59.558 43.478 8.18 0.00 0.00 2.71
8060 10619 4.673580 GCAGTGCTATTGAGTTCCATGTTG 60.674 45.833 8.18 0.00 0.00 3.33
8061 10620 4.696877 CAGTGCTATTGAGTTCCATGTTGA 59.303 41.667 0.00 0.00 0.00 3.18
8064 10623 4.696877 TGCTATTGAGTTCCATGTTGAGTG 59.303 41.667 0.00 0.00 0.00 3.51
8065 10624 4.697352 GCTATTGAGTTCCATGTTGAGTGT 59.303 41.667 0.00 0.00 0.00 3.55
8066 10625 5.182001 GCTATTGAGTTCCATGTTGAGTGTT 59.818 40.000 0.00 0.00 0.00 3.32
8067 10626 6.371548 GCTATTGAGTTCCATGTTGAGTGTTA 59.628 38.462 0.00 0.00 0.00 2.41
8068 10627 7.066284 GCTATTGAGTTCCATGTTGAGTGTTAT 59.934 37.037 0.00 0.00 0.00 1.89
8069 10628 6.801539 TTGAGTTCCATGTTGAGTGTTATC 57.198 37.500 0.00 0.00 0.00 1.75
8074 10633 6.998074 AGTTCCATGTTGAGTGTTATCAAGAA 59.002 34.615 0.00 0.00 39.78 2.52
8075 10634 7.502226 AGTTCCATGTTGAGTGTTATCAAGAAA 59.498 33.333 0.00 0.00 39.78 2.52
8155 10749 9.645059 AAGGATGTTTATATCTCGTGTATCATG 57.355 33.333 0.00 0.00 0.00 3.07
8164 10758 4.993905 TCTCGTGTATCATGTACACCAAG 58.006 43.478 22.07 19.76 43.45 3.61
8166 10760 5.047590 TCTCGTGTATCATGTACACCAAGTT 60.048 40.000 22.07 0.00 43.45 2.66
8167 10761 4.926832 TCGTGTATCATGTACACCAAGTTG 59.073 41.667 22.07 13.10 43.45 3.16
8168 10762 4.688879 CGTGTATCATGTACACCAAGTTGT 59.311 41.667 22.07 0.00 43.45 3.32
8169 10763 5.163992 CGTGTATCATGTACACCAAGTTGTC 60.164 44.000 22.07 5.56 43.45 3.18
8170 10764 5.932303 GTGTATCATGTACACCAAGTTGTCT 59.068 40.000 19.50 0.00 41.27 3.41
8171 10765 6.426937 GTGTATCATGTACACCAAGTTGTCTT 59.573 38.462 19.50 0.00 41.27 3.01
8172 10766 6.995686 TGTATCATGTACACCAAGTTGTCTTT 59.004 34.615 0.00 0.00 0.00 2.52
8173 10767 6.959639 ATCATGTACACCAAGTTGTCTTTT 57.040 33.333 0.00 0.00 0.00 2.27
8174 10768 6.371809 TCATGTACACCAAGTTGTCTTTTC 57.628 37.500 0.00 0.00 0.00 2.29
8175 10769 6.119536 TCATGTACACCAAGTTGTCTTTTCT 58.880 36.000 0.00 0.00 0.00 2.52
8176 10770 5.811399 TGTACACCAAGTTGTCTTTTCTG 57.189 39.130 1.45 0.00 0.00 3.02
8177 10771 4.638421 TGTACACCAAGTTGTCTTTTCTGG 59.362 41.667 1.45 0.00 0.00 3.86
8178 10772 3.697166 ACACCAAGTTGTCTTTTCTGGT 58.303 40.909 1.45 0.00 29.87 4.00
8179 10773 3.443681 ACACCAAGTTGTCTTTTCTGGTG 59.556 43.478 15.62 15.62 43.53 4.17
8180 10774 3.694072 CACCAAGTTGTCTTTTCTGGTGA 59.306 43.478 12.62 0.00 42.01 4.02
8181 10775 4.157656 CACCAAGTTGTCTTTTCTGGTGAA 59.842 41.667 12.62 0.00 42.01 3.18
8182 10776 4.956075 ACCAAGTTGTCTTTTCTGGTGAAT 59.044 37.500 1.45 0.00 29.11 2.57
8183 10777 6.039270 CACCAAGTTGTCTTTTCTGGTGAATA 59.961 38.462 12.62 0.00 42.01 1.75
8184 10778 6.039382 ACCAAGTTGTCTTTTCTGGTGAATAC 59.961 38.462 1.45 0.00 29.11 1.89
8185 10779 6.039270 CCAAGTTGTCTTTTCTGGTGAATACA 59.961 38.462 1.45 0.00 31.56 2.29
8186 10780 6.867662 AGTTGTCTTTTCTGGTGAATACAG 57.132 37.500 0.00 0.00 37.30 2.74
8187 10781 5.239525 AGTTGTCTTTTCTGGTGAATACAGC 59.760 40.000 0.00 0.00 43.75 4.40
8188 10782 4.072131 TGTCTTTTCTGGTGAATACAGCC 58.928 43.478 0.00 0.00 42.95 4.85
8189 10783 4.072131 GTCTTTTCTGGTGAATACAGCCA 58.928 43.478 0.00 0.00 42.95 4.75
8190 10784 4.154918 GTCTTTTCTGGTGAATACAGCCAG 59.845 45.833 3.61 3.61 42.95 4.85
8191 10785 2.113860 TTCTGGTGAATACAGCCAGC 57.886 50.000 5.05 0.00 42.95 4.85
8192 10786 0.253044 TCTGGTGAATACAGCCAGCC 59.747 55.000 5.05 0.00 42.95 4.85
8193 10787 0.035152 CTGGTGAATACAGCCAGCCA 60.035 55.000 0.00 0.00 42.95 4.75
8194 10788 0.403655 TGGTGAATACAGCCAGCCAA 59.596 50.000 0.00 0.00 42.95 4.52
8195 10789 1.202989 TGGTGAATACAGCCAGCCAAA 60.203 47.619 0.00 0.00 42.95 3.28
8196 10790 2.102578 GGTGAATACAGCCAGCCAAAT 58.897 47.619 0.00 0.00 38.41 2.32
8197 10791 2.159198 GGTGAATACAGCCAGCCAAATG 60.159 50.000 0.00 0.00 38.41 2.32
8198 10792 2.754552 GTGAATACAGCCAGCCAAATGA 59.245 45.455 0.00 0.00 0.00 2.57
8199 10793 2.754552 TGAATACAGCCAGCCAAATGAC 59.245 45.455 0.00 0.00 0.00 3.06
8200 10794 2.512692 ATACAGCCAGCCAAATGACA 57.487 45.000 0.00 0.00 0.00 3.58
8210 10804 3.446161 CAGCCAAATGACAGGAATCATGT 59.554 43.478 0.00 0.00 39.32 3.21
8214 10808 6.211184 AGCCAAATGACAGGAATCATGTTTTA 59.789 34.615 1.00 0.00 39.32 1.52
8250 10844 3.012518 GCAGTGCTATTGAGTTCCATGT 58.987 45.455 8.18 0.00 0.00 3.21
8251 10845 3.441572 GCAGTGCTATTGAGTTCCATGTT 59.558 43.478 8.18 0.00 0.00 2.71
8252 10846 4.673580 GCAGTGCTATTGAGTTCCATGTTG 60.674 45.833 8.18 0.00 0.00 3.33
8253 10847 4.696877 CAGTGCTATTGAGTTCCATGTTGA 59.303 41.667 0.00 0.00 0.00 3.18
8256 10850 4.696877 TGCTATTGAGTTCCATGTTGAGTG 59.303 41.667 0.00 0.00 0.00 3.51
8257 10851 4.697352 GCTATTGAGTTCCATGTTGAGTGT 59.303 41.667 0.00 0.00 0.00 3.55
8258 10852 5.182001 GCTATTGAGTTCCATGTTGAGTGTT 59.818 40.000 0.00 0.00 0.00 3.32
8259 10853 6.371548 GCTATTGAGTTCCATGTTGAGTGTTA 59.628 38.462 0.00 0.00 0.00 2.41
8350 10999 6.371548 TGTCCAAGTATAACAGAACAGAATGC 59.628 38.462 0.00 0.00 42.53 3.56
8352 11001 7.066284 GTCCAAGTATAACAGAACAGAATGCAT 59.934 37.037 0.00 0.00 42.53 3.96
8353 11002 7.611467 TCCAAGTATAACAGAACAGAATGCATT 59.389 33.333 12.83 12.83 42.53 3.56
8354 11003 8.892723 CCAAGTATAACAGAACAGAATGCATTA 58.107 33.333 12.97 0.00 42.53 1.90
8355 11004 9.708222 CAAGTATAACAGAACAGAATGCATTAC 57.292 33.333 12.97 6.35 42.53 1.89
8357 11006 9.618890 AGTATAACAGAACAGAATGCATTACAT 57.381 29.630 12.97 0.00 42.53 2.29
8358 11007 9.655769 GTATAACAGAACAGAATGCATTACATG 57.344 33.333 12.97 13.71 42.53 3.21
8466 11117 3.243068 CCTTGTTACAGGTTCAGCACAAC 60.243 47.826 0.00 0.00 0.00 3.32
8499 11150 4.444306 GGACAGTGGATCGATTTATTGGGA 60.444 45.833 0.00 0.00 0.00 4.37
8646 11297 5.235616 ACAGGTTGTACTTACACATTTGTCG 59.764 40.000 0.00 0.00 37.15 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.587388 AAACTTGCATCCATCCATAGTTG 57.413 39.130 0.00 0.00 0.00 3.16
1 2 5.716228 TCAAAACTTGCATCCATCCATAGTT 59.284 36.000 0.00 0.00 0.00 2.24
2 3 5.263599 TCAAAACTTGCATCCATCCATAGT 58.736 37.500 0.00 0.00 0.00 2.12
3 4 5.840243 TCAAAACTTGCATCCATCCATAG 57.160 39.130 0.00 0.00 0.00 2.23
4 5 6.602410 TTTCAAAACTTGCATCCATCCATA 57.398 33.333 0.00 0.00 0.00 2.74
5 6 5.486735 TTTCAAAACTTGCATCCATCCAT 57.513 34.783 0.00 0.00 0.00 3.41
6 7 4.952071 TTTCAAAACTTGCATCCATCCA 57.048 36.364 0.00 0.00 0.00 3.41
7 8 5.333263 CGTTTTTCAAAACTTGCATCCATCC 60.333 40.000 12.22 0.00 44.58 3.51
8 9 5.234116 ACGTTTTTCAAAACTTGCATCCATC 59.766 36.000 12.22 0.00 44.58 3.51
9 10 5.006552 CACGTTTTTCAAAACTTGCATCCAT 59.993 36.000 12.22 0.00 44.58 3.41
10 11 4.328440 CACGTTTTTCAAAACTTGCATCCA 59.672 37.500 12.22 0.00 44.58 3.41
11 12 4.328712 ACACGTTTTTCAAAACTTGCATCC 59.671 37.500 17.17 0.00 46.13 3.51
12 13 5.448926 ACACGTTTTTCAAAACTTGCATC 57.551 34.783 17.17 0.00 46.13 3.91
13 14 6.326375 TCTACACGTTTTTCAAAACTTGCAT 58.674 32.000 17.17 6.02 46.13 3.96
14 15 5.700846 TCTACACGTTTTTCAAAACTTGCA 58.299 33.333 17.17 7.62 46.13 4.08
15 16 6.470877 TCATCTACACGTTTTTCAAAACTTGC 59.529 34.615 17.17 0.00 46.13 4.01
16 17 7.908082 TCTCATCTACACGTTTTTCAAAACTTG 59.092 33.333 16.14 16.14 46.98 3.16
17 18 7.981142 TCTCATCTACACGTTTTTCAAAACTT 58.019 30.769 12.22 1.61 44.58 2.66
18 19 7.548196 TCTCATCTACACGTTTTTCAAAACT 57.452 32.000 12.22 0.00 44.58 2.66
19 20 7.149128 GCATCTCATCTACACGTTTTTCAAAAC 60.149 37.037 5.25 5.25 43.61 2.43
20 21 6.855914 GCATCTCATCTACACGTTTTTCAAAA 59.144 34.615 0.00 0.00 0.00 2.44
21 22 6.017523 TGCATCTCATCTACACGTTTTTCAAA 60.018 34.615 0.00 0.00 0.00 2.69
22 23 5.468409 TGCATCTCATCTACACGTTTTTCAA 59.532 36.000 0.00 0.00 0.00 2.69
23 24 4.994217 TGCATCTCATCTACACGTTTTTCA 59.006 37.500 0.00 0.00 0.00 2.69
24 25 5.107104 TGTGCATCTCATCTACACGTTTTTC 60.107 40.000 0.00 0.00 33.96 2.29
25 26 4.754618 TGTGCATCTCATCTACACGTTTTT 59.245 37.500 0.00 0.00 33.96 1.94
26 27 4.314961 TGTGCATCTCATCTACACGTTTT 58.685 39.130 0.00 0.00 33.96 2.43
27 28 3.925379 TGTGCATCTCATCTACACGTTT 58.075 40.909 0.00 0.00 33.96 3.60
28 29 3.592898 TGTGCATCTCATCTACACGTT 57.407 42.857 0.00 0.00 33.96 3.99
29 30 3.131046 TCATGTGCATCTCATCTACACGT 59.869 43.478 0.00 0.00 33.96 4.49
30 31 3.709987 TCATGTGCATCTCATCTACACG 58.290 45.455 0.00 0.00 33.96 4.49
31 32 5.177142 GTCATCATGTGCATCTCATCTACAC 59.823 44.000 0.00 0.00 0.00 2.90
32 33 5.163385 TGTCATCATGTGCATCTCATCTACA 60.163 40.000 0.00 0.00 0.00 2.74
33 34 5.295152 TGTCATCATGTGCATCTCATCTAC 58.705 41.667 0.00 0.00 0.00 2.59
34 35 5.540400 TGTCATCATGTGCATCTCATCTA 57.460 39.130 0.00 0.00 0.00 1.98
35 36 4.417426 TGTCATCATGTGCATCTCATCT 57.583 40.909 0.00 0.00 0.00 2.90
36 37 4.083271 CCATGTCATCATGTGCATCTCATC 60.083 45.833 0.00 0.00 46.99 2.92
37 38 3.821033 CCATGTCATCATGTGCATCTCAT 59.179 43.478 0.00 0.00 46.99 2.90
38 39 3.211045 CCATGTCATCATGTGCATCTCA 58.789 45.455 0.00 0.00 46.99 3.27
39 40 2.031069 GCCATGTCATCATGTGCATCTC 60.031 50.000 0.00 0.00 46.99 2.75
40 41 1.954382 GCCATGTCATCATGTGCATCT 59.046 47.619 0.00 0.00 46.99 2.90
41 42 1.679153 TGCCATGTCATCATGTGCATC 59.321 47.619 14.96 0.00 46.99 3.91
42 43 1.770294 TGCCATGTCATCATGTGCAT 58.230 45.000 14.96 2.88 46.99 3.96
43 44 1.546961 TTGCCATGTCATCATGTGCA 58.453 45.000 14.96 14.96 46.99 4.57
44 45 2.094390 ACTTTGCCATGTCATCATGTGC 60.094 45.455 7.30 9.77 46.99 4.57
45 46 3.507786 CACTTTGCCATGTCATCATGTG 58.492 45.455 7.30 0.00 46.99 3.21
46 47 2.094390 GCACTTTGCCATGTCATCATGT 60.094 45.455 7.30 0.00 46.99 3.21
48 49 2.172679 TGCACTTTGCCATGTCATCAT 58.827 42.857 0.00 0.00 44.23 2.45
49 50 1.618487 TGCACTTTGCCATGTCATCA 58.382 45.000 0.00 0.00 44.23 3.07
50 51 2.288334 TGTTGCACTTTGCCATGTCATC 60.288 45.455 0.00 0.00 44.23 2.92
51 52 1.687660 TGTTGCACTTTGCCATGTCAT 59.312 42.857 0.00 0.00 44.23 3.06
52 53 1.109609 TGTTGCACTTTGCCATGTCA 58.890 45.000 0.00 0.00 44.23 3.58
53 54 1.202394 TGTGTTGCACTTTGCCATGTC 60.202 47.619 0.00 0.00 44.23 3.06
54 55 0.822811 TGTGTTGCACTTTGCCATGT 59.177 45.000 0.00 0.00 44.23 3.21
55 56 1.210870 GTGTGTTGCACTTTGCCATG 58.789 50.000 0.00 0.00 44.23 3.66
56 57 3.665544 GTGTGTTGCACTTTGCCAT 57.334 47.368 0.00 0.00 44.23 4.40
65 66 1.020437 TCATTCGCTTGTGTGTTGCA 58.980 45.000 0.00 0.00 0.00 4.08
66 67 1.268488 TGTCATTCGCTTGTGTGTTGC 60.268 47.619 0.00 0.00 0.00 4.17
67 68 2.753989 TGTCATTCGCTTGTGTGTTG 57.246 45.000 0.00 0.00 0.00 3.33
68 69 2.030893 CCATGTCATTCGCTTGTGTGTT 60.031 45.455 0.00 0.00 0.00 3.32
69 70 1.536766 CCATGTCATTCGCTTGTGTGT 59.463 47.619 0.00 0.00 0.00 3.72
70 71 1.730121 GCCATGTCATTCGCTTGTGTG 60.730 52.381 0.00 0.00 0.00 3.82
71 72 0.523072 GCCATGTCATTCGCTTGTGT 59.477 50.000 0.00 0.00 0.00 3.72
72 73 0.522626 TGCCATGTCATTCGCTTGTG 59.477 50.000 0.00 0.00 0.00 3.33
73 74 1.068333 GTTGCCATGTCATTCGCTTGT 60.068 47.619 0.00 0.00 0.00 3.16
74 75 1.621107 GTTGCCATGTCATTCGCTTG 58.379 50.000 0.00 0.00 0.00 4.01
75 76 0.168788 CGTTGCCATGTCATTCGCTT 59.831 50.000 0.00 0.00 0.00 4.68
76 77 0.673333 TCGTTGCCATGTCATTCGCT 60.673 50.000 0.00 0.00 0.00 4.93
77 78 0.521242 GTCGTTGCCATGTCATTCGC 60.521 55.000 0.00 0.00 0.00 4.70
78 79 0.247262 CGTCGTTGCCATGTCATTCG 60.247 55.000 0.00 0.00 0.00 3.34
79 80 0.096976 CCGTCGTTGCCATGTCATTC 59.903 55.000 0.00 0.00 0.00 2.67
80 81 0.605319 ACCGTCGTTGCCATGTCATT 60.605 50.000 0.00 0.00 0.00 2.57
81 82 1.003839 ACCGTCGTTGCCATGTCAT 60.004 52.632 0.00 0.00 0.00 3.06
82 83 1.958715 CACCGTCGTTGCCATGTCA 60.959 57.895 0.00 0.00 0.00 3.58
83 84 1.225376 TTCACCGTCGTTGCCATGTC 61.225 55.000 0.00 0.00 0.00 3.06
84 85 0.605319 ATTCACCGTCGTTGCCATGT 60.605 50.000 0.00 0.00 0.00 3.21
85 86 1.364721 TATTCACCGTCGTTGCCATG 58.635 50.000 0.00 0.00 0.00 3.66
86 87 2.102070 TTATTCACCGTCGTTGCCAT 57.898 45.000 0.00 0.00 0.00 4.40
87 88 1.532007 GTTTATTCACCGTCGTTGCCA 59.468 47.619 0.00 0.00 0.00 4.92
88 89 1.462869 CGTTTATTCACCGTCGTTGCC 60.463 52.381 0.00 0.00 0.00 4.52
89 90 1.462869 CCGTTTATTCACCGTCGTTGC 60.463 52.381 0.00 0.00 0.00 4.17
90 91 2.060284 TCCGTTTATTCACCGTCGTTG 58.940 47.619 0.00 0.00 0.00 4.10
91 92 2.437200 TCCGTTTATTCACCGTCGTT 57.563 45.000 0.00 0.00 0.00 3.85
92 93 2.030007 TCTTCCGTTTATTCACCGTCGT 60.030 45.455 0.00 0.00 0.00 4.34
93 94 2.343544 GTCTTCCGTTTATTCACCGTCG 59.656 50.000 0.00 0.00 0.00 5.12
94 95 3.319755 TGTCTTCCGTTTATTCACCGTC 58.680 45.455 0.00 0.00 0.00 4.79
95 96 3.389925 TGTCTTCCGTTTATTCACCGT 57.610 42.857 0.00 0.00 0.00 4.83
96 97 4.181578 AGATGTCTTCCGTTTATTCACCG 58.818 43.478 0.00 0.00 0.00 4.94
97 98 6.570692 TCTAGATGTCTTCCGTTTATTCACC 58.429 40.000 0.00 0.00 0.00 4.02
98 99 6.199342 GCTCTAGATGTCTTCCGTTTATTCAC 59.801 42.308 0.00 0.00 0.00 3.18
99 100 6.127451 TGCTCTAGATGTCTTCCGTTTATTCA 60.127 38.462 0.00 0.00 0.00 2.57
100 101 6.273825 TGCTCTAGATGTCTTCCGTTTATTC 58.726 40.000 0.00 0.00 0.00 1.75
101 102 6.222038 TGCTCTAGATGTCTTCCGTTTATT 57.778 37.500 0.00 0.00 0.00 1.40
102 103 5.854010 TGCTCTAGATGTCTTCCGTTTAT 57.146 39.130 0.00 0.00 0.00 1.40
103 104 5.505819 CGATGCTCTAGATGTCTTCCGTTTA 60.506 44.000 0.00 0.00 0.00 2.01
104 105 4.688021 GATGCTCTAGATGTCTTCCGTTT 58.312 43.478 0.00 0.00 0.00 3.60
105 106 3.243234 CGATGCTCTAGATGTCTTCCGTT 60.243 47.826 0.00 0.00 0.00 4.44
106 107 2.292016 CGATGCTCTAGATGTCTTCCGT 59.708 50.000 0.00 0.00 0.00 4.69
107 108 2.351253 CCGATGCTCTAGATGTCTTCCG 60.351 54.545 0.00 0.00 0.00 4.30
108 109 2.625790 ACCGATGCTCTAGATGTCTTCC 59.374 50.000 0.00 0.00 0.00 3.46
109 110 3.568007 AGACCGATGCTCTAGATGTCTTC 59.432 47.826 0.00 0.00 0.00 2.87
110 111 3.561143 AGACCGATGCTCTAGATGTCTT 58.439 45.455 0.00 0.00 0.00 3.01
111 112 3.222173 AGACCGATGCTCTAGATGTCT 57.778 47.619 0.00 0.00 0.00 3.41
112 113 4.047822 CAAAGACCGATGCTCTAGATGTC 58.952 47.826 0.00 0.00 0.00 3.06
113 114 3.181471 CCAAAGACCGATGCTCTAGATGT 60.181 47.826 0.00 0.00 0.00 3.06
114 115 3.388308 CCAAAGACCGATGCTCTAGATG 58.612 50.000 0.00 0.00 0.00 2.90
115 116 2.366916 CCCAAAGACCGATGCTCTAGAT 59.633 50.000 0.00 0.00 0.00 1.98
116 117 1.757118 CCCAAAGACCGATGCTCTAGA 59.243 52.381 0.00 0.00 0.00 2.43
117 118 1.808133 GCCCAAAGACCGATGCTCTAG 60.808 57.143 0.00 0.00 0.00 2.43
118 119 0.178068 GCCCAAAGACCGATGCTCTA 59.822 55.000 0.00 0.00 0.00 2.43
119 120 1.078143 GCCCAAAGACCGATGCTCT 60.078 57.895 0.00 0.00 0.00 4.09
120 121 2.464459 CGCCCAAAGACCGATGCTC 61.464 63.158 0.00 0.00 0.00 4.26
121 122 2.436646 CGCCCAAAGACCGATGCT 60.437 61.111 0.00 0.00 0.00 3.79
122 123 2.746277 ACGCCCAAAGACCGATGC 60.746 61.111 0.00 0.00 0.00 3.91
123 124 1.375396 TGACGCCCAAAGACCGATG 60.375 57.895 0.00 0.00 0.00 3.84
124 125 1.375523 GTGACGCCCAAAGACCGAT 60.376 57.895 0.00 0.00 0.00 4.18
125 126 2.029964 GTGACGCCCAAAGACCGA 59.970 61.111 0.00 0.00 0.00 4.69
126 127 1.440938 TTTGTGACGCCCAAAGACCG 61.441 55.000 0.00 0.00 0.00 4.79
127 128 2.410466 TTTGTGACGCCCAAAGACC 58.590 52.632 0.00 0.00 0.00 3.85
130 131 3.845625 GTCTTTGTGACGCCCAAAG 57.154 52.632 13.08 13.08 46.46 2.77
154 155 3.816580 GGAGGTCTTGAACTCCGAC 57.183 57.895 17.68 0.00 43.37 4.79
227 228 8.406297 CAAGGGAAATAAAGATACAAAGGTAGC 58.594 37.037 0.00 0.00 36.15 3.58
278 279 9.448438 AAGTACTCAAATCACAAGCAATACATA 57.552 29.630 0.00 0.00 0.00 2.29
300 301 9.513906 TTTATTGGACAAGATTCACATCAAGTA 57.486 29.630 0.00 0.00 0.00 2.24
302 303 8.517878 ACTTTATTGGACAAGATTCACATCAAG 58.482 33.333 0.00 0.00 0.00 3.02
304 305 7.448161 ACACTTTATTGGACAAGATTCACATCA 59.552 33.333 0.00 0.00 0.00 3.07
305 306 7.820648 ACACTTTATTGGACAAGATTCACATC 58.179 34.615 0.00 0.00 0.00 3.06
306 307 7.765695 ACACTTTATTGGACAAGATTCACAT 57.234 32.000 0.00 0.00 0.00 3.21
334 338 5.901853 AGGAGAACATGAGATATCACAAGGA 59.098 40.000 6.94 0.00 0.00 3.36
351 355 3.002348 CACCAAAAACACGAGAGGAGAAC 59.998 47.826 0.00 0.00 0.00 3.01
354 358 2.561569 ACACCAAAAACACGAGAGGAG 58.438 47.619 0.00 0.00 0.00 3.69
362 366 2.032924 CGAGGAGGAACACCAAAAACAC 59.967 50.000 0.00 0.00 43.22 3.32
367 371 2.290071 GGATTCGAGGAGGAACACCAAA 60.290 50.000 0.00 0.00 43.22 3.28
370 374 0.902531 TGGATTCGAGGAGGAACACC 59.097 55.000 0.00 0.00 40.21 4.16
385 389 5.278315 CGATGTTCATGAATTGCAGATGGAT 60.278 40.000 12.12 0.00 0.00 3.41
390 394 2.684374 CCCGATGTTCATGAATTGCAGA 59.316 45.455 12.12 0.00 0.00 4.26
393 397 1.406539 AGCCCGATGTTCATGAATTGC 59.593 47.619 12.12 8.28 0.00 3.56
413 417 5.343715 TGATGTAGGACAAAACCCTAGGTA 58.656 41.667 8.29 0.00 36.98 3.08
427 431 9.850198 TGATCACATTGAATATTTGATGTAGGA 57.150 29.630 13.86 10.29 31.92 2.94
497 501 1.454847 AACAGCGGCCCTGAAACAA 60.455 52.632 23.24 0.00 44.64 2.83
685 711 4.129148 GAGATGCCCCACCCCCAC 62.129 72.222 0.00 0.00 0.00 4.61
892 921 1.592400 TTCCGTCTCGCTCAACCGAT 61.592 55.000 0.00 0.00 36.54 4.18
1334 1363 6.321717 GCAACAGTTTTTATATGCTAGCACA 58.678 36.000 22.07 9.56 0.00 4.57
1364 1393 0.672342 AGCGAACACTGGAACGTACT 59.328 50.000 0.00 0.00 0.00 2.73
1366 1395 3.188773 CAGCGAACACTGGAACGTA 57.811 52.632 0.00 0.00 33.85 3.57
1367 1396 4.027755 CAGCGAACACTGGAACGT 57.972 55.556 0.00 0.00 33.85 3.99
1381 1420 0.109597 CCAGCGAATGAAACACCAGC 60.110 55.000 0.00 0.00 0.00 4.85
1488 1527 0.178767 TGATTGCCCTCCTCGACATG 59.821 55.000 0.00 0.00 0.00 3.21
1497 1536 0.107017 TAAGCCTGCTGATTGCCCTC 60.107 55.000 0.00 0.00 42.00 4.30
1541 1580 4.692228 CTTAGCTTAAGCCCAGAAGAGAG 58.308 47.826 23.71 5.27 43.38 3.20
1621 1660 1.537202 GCAAGCGTCCAGAACAAGAAT 59.463 47.619 0.00 0.00 0.00 2.40
1659 1698 2.555757 GTGCAAGCTCAGTTTCTTGGAT 59.444 45.455 0.00 0.00 41.43 3.41
1679 1718 2.362077 CAAGCCAGCAACCAAGTAAAGT 59.638 45.455 0.00 0.00 0.00 2.66
1759 1798 9.979270 GGCGAATATGAGAATAATACAAGAATG 57.021 33.333 0.00 0.00 0.00 2.67
1905 1944 7.095187 CCCTATGAGTGTACAAAAGACAAAGAC 60.095 40.741 0.00 0.00 0.00 3.01
2096 2135 5.277825 TGCTTGTCAAAAATCCAACTAACG 58.722 37.500 0.00 0.00 0.00 3.18
2315 2368 4.566004 TGACAGCTTAAGTCGCTTATGTT 58.434 39.130 4.02 5.70 38.83 2.71
2409 2477 9.599322 GCTTCACATAAACAATATAGCATGTAC 57.401 33.333 0.00 0.00 0.00 2.90
2451 2519 4.016444 CACACCCAATTAAGGCACTGTAT 58.984 43.478 0.00 0.00 40.86 2.29
2568 2667 6.410942 TGTATGAGAGAGAGAGAGAGAGAG 57.589 45.833 0.00 0.00 0.00 3.20
2569 2668 6.327365 ACATGTATGAGAGAGAGAGAGAGAGA 59.673 42.308 0.00 0.00 0.00 3.10
2570 2669 6.528321 ACATGTATGAGAGAGAGAGAGAGAG 58.472 44.000 0.00 0.00 0.00 3.20
2571 2670 6.499106 ACATGTATGAGAGAGAGAGAGAGA 57.501 41.667 0.00 0.00 0.00 3.10
2572 2671 7.067372 ACAAACATGTATGAGAGAGAGAGAGAG 59.933 40.741 0.00 0.00 0.00 3.20
2573 2672 6.889177 ACAAACATGTATGAGAGAGAGAGAGA 59.111 38.462 0.00 0.00 0.00 3.10
2574 2673 7.099266 ACAAACATGTATGAGAGAGAGAGAG 57.901 40.000 0.00 0.00 0.00 3.20
2575 2674 6.096141 GGACAAACATGTATGAGAGAGAGAGA 59.904 42.308 0.00 0.00 0.00 3.10
2576 2675 6.272318 GGACAAACATGTATGAGAGAGAGAG 58.728 44.000 0.00 0.00 0.00 3.20
2577 2676 5.127845 GGGACAAACATGTATGAGAGAGAGA 59.872 44.000 0.00 0.00 0.00 3.10
2578 2677 5.105187 TGGGACAAACATGTATGAGAGAGAG 60.105 44.000 0.00 0.00 31.92 3.20
2579 2678 4.777366 TGGGACAAACATGTATGAGAGAGA 59.223 41.667 0.00 0.00 31.92 3.10
2580 2679 5.089970 TGGGACAAACATGTATGAGAGAG 57.910 43.478 0.00 0.00 31.92 3.20
2674 2773 7.523709 GCTGAATCCATGTCTTCAACCTTTAAA 60.524 37.037 8.13 0.00 31.40 1.52
2762 2861 3.211865 AGCATCAGATAACAGTGCATGG 58.788 45.455 0.00 0.00 38.23 3.66
2880 2979 5.562298 AGAACCACAGCCTTAGTAAAGAA 57.438 39.130 0.00 0.00 34.37 2.52
2881 2980 5.562298 AAGAACCACAGCCTTAGTAAAGA 57.438 39.130 0.00 0.00 34.37 2.52
2882 2981 6.708949 TGTAAAGAACCACAGCCTTAGTAAAG 59.291 38.462 0.00 0.00 0.00 1.85
2883 2982 6.593807 TGTAAAGAACCACAGCCTTAGTAAA 58.406 36.000 0.00 0.00 0.00 2.01
2884 2983 6.177310 TGTAAAGAACCACAGCCTTAGTAA 57.823 37.500 0.00 0.00 0.00 2.24
2885 2984 5.811796 TGTAAAGAACCACAGCCTTAGTA 57.188 39.130 0.00 0.00 0.00 1.82
2886 2985 4.699925 TGTAAAGAACCACAGCCTTAGT 57.300 40.909 0.00 0.00 0.00 2.24
2946 4617 6.953101 TCAACTGTAGGCTATTTCACCAATA 58.047 36.000 0.00 0.00 0.00 1.90
3203 4880 8.686334 ACAAATCTAATGTTGTGTCAAGAGTTT 58.314 29.630 0.00 0.00 36.62 2.66
3204 4881 8.131100 CACAAATCTAATGTTGTGTCAAGAGTT 58.869 33.333 8.09 0.00 46.15 3.01
3205 4882 7.642669 CACAAATCTAATGTTGTGTCAAGAGT 58.357 34.615 8.09 0.00 46.15 3.24
3216 4893 5.477984 ACCATGAGCACACAAATCTAATGTT 59.522 36.000 0.00 0.00 0.00 2.71
3223 4900 3.119708 GGAAGACCATGAGCACACAAATC 60.120 47.826 0.00 0.00 35.97 2.17
3290 4969 5.296748 ACATCAAGGGTTGCAAATTACAAC 58.703 37.500 0.00 13.33 45.30 3.32
3346 5025 8.912988 TGGTGTGAAGAATTTAGAGACAAAAAT 58.087 29.630 0.00 0.00 0.00 1.82
3352 5031 7.201565 GCTGTATGGTGTGAAGAATTTAGAGAC 60.202 40.741 0.00 0.00 0.00 3.36
3362 5041 1.278985 CAGGGCTGTATGGTGTGAAGA 59.721 52.381 0.00 0.00 0.00 2.87
3418 5097 0.251608 GCTAAACTTGGGGGAAGGCA 60.252 55.000 0.00 0.00 35.78 4.75
3470 5171 5.105473 TCAGATACCTTACAGGCTTACACAC 60.105 44.000 0.00 0.00 39.63 3.82
3471 5172 5.020795 TCAGATACCTTACAGGCTTACACA 58.979 41.667 0.00 0.00 39.63 3.72
3472 5173 5.593679 TCAGATACCTTACAGGCTTACAC 57.406 43.478 0.00 0.00 39.63 2.90
3473 5174 5.897250 TGATCAGATACCTTACAGGCTTACA 59.103 40.000 0.00 0.00 39.63 2.41
3474 5175 6.183360 TGTGATCAGATACCTTACAGGCTTAC 60.183 42.308 0.00 0.00 39.63 2.34
3475 5176 5.897250 TGTGATCAGATACCTTACAGGCTTA 59.103 40.000 0.00 0.00 39.63 3.09
3476 5177 4.716784 TGTGATCAGATACCTTACAGGCTT 59.283 41.667 0.00 0.00 39.63 4.35
3477 5178 4.290093 TGTGATCAGATACCTTACAGGCT 58.710 43.478 0.00 0.00 39.63 4.58
3478 5179 4.672587 TGTGATCAGATACCTTACAGGC 57.327 45.455 0.00 0.00 39.63 4.85
3479 5180 7.060383 AGAATGTGATCAGATACCTTACAGG 57.940 40.000 5.67 0.00 42.49 4.00
3480 5181 8.085296 GGTAGAATGTGATCAGATACCTTACAG 58.915 40.741 13.52 0.00 32.20 2.74
3481 5182 7.563556 TGGTAGAATGTGATCAGATACCTTACA 59.436 37.037 18.92 12.47 34.14 2.41
3482 5183 7.952671 TGGTAGAATGTGATCAGATACCTTAC 58.047 38.462 18.92 12.72 34.14 2.34
3483 5184 8.547481 TTGGTAGAATGTGATCAGATACCTTA 57.453 34.615 18.92 8.68 34.14 2.69
3484 5185 7.437713 TTGGTAGAATGTGATCAGATACCTT 57.562 36.000 18.92 1.32 34.14 3.50
3485 5186 7.345653 TCTTTGGTAGAATGTGATCAGATACCT 59.654 37.037 18.92 14.95 34.14 3.08
3486 5187 7.500992 TCTTTGGTAGAATGTGATCAGATACC 58.499 38.462 13.79 13.79 33.87 2.73
3487 5188 8.948631 TTCTTTGGTAGAATGTGATCAGATAC 57.051 34.615 5.67 0.85 37.96 2.24
3488 5189 9.958180 TTTTCTTTGGTAGAATGTGATCAGATA 57.042 29.630 5.67 0.00 42.32 1.98
3489 5190 8.868522 TTTTCTTTGGTAGAATGTGATCAGAT 57.131 30.769 0.00 0.00 42.32 2.90
3490 5191 8.733458 CATTTTCTTTGGTAGAATGTGATCAGA 58.267 33.333 0.00 0.00 42.32 3.27
3491 5192 8.517878 ACATTTTCTTTGGTAGAATGTGATCAG 58.482 33.333 0.00 0.00 42.32 2.90
3492 5193 8.408043 ACATTTTCTTTGGTAGAATGTGATCA 57.592 30.769 0.00 0.00 42.32 2.92
3493 5194 9.696917 AAACATTTTCTTTGGTAGAATGTGATC 57.303 29.630 0.00 0.00 42.32 2.92
3494 5195 9.480053 CAAACATTTTCTTTGGTAGAATGTGAT 57.520 29.630 0.00 0.00 42.32 3.06
3495 5196 7.437862 GCAAACATTTTCTTTGGTAGAATGTGA 59.562 33.333 0.00 0.00 42.32 3.58
3496 5197 7.307337 GGCAAACATTTTCTTTGGTAGAATGTG 60.307 37.037 0.00 0.00 42.32 3.21
3497 5198 6.705825 GGCAAACATTTTCTTTGGTAGAATGT 59.294 34.615 0.00 0.00 42.32 2.71
3498 5199 6.930722 AGGCAAACATTTTCTTTGGTAGAATG 59.069 34.615 0.00 0.00 42.32 2.67
3499 5200 7.066307 AGGCAAACATTTTCTTTGGTAGAAT 57.934 32.000 0.00 0.00 42.32 2.40
3500 5201 6.478512 AGGCAAACATTTTCTTTGGTAGAA 57.521 33.333 0.00 0.00 41.11 2.10
3662 5363 4.572389 CCGCTATTGCTTGTCTACAGAAAT 59.428 41.667 0.00 0.00 36.97 2.17
3723 5432 8.772705 GCATCAAAGTACATCAAATTTGGAAAA 58.227 29.630 17.90 0.00 34.25 2.29
3724 5433 7.930325 TGCATCAAAGTACATCAAATTTGGAAA 59.070 29.630 17.90 0.00 34.25 3.13
3772 5484 3.117738 AGGGTCAGCCATTAATTCTGGAG 60.118 47.826 10.42 3.34 35.70 3.86
3797 5509 3.290710 AGTAATGGCATCACATCCAACC 58.709 45.455 3.11 0.00 35.75 3.77
3989 5701 9.453572 AAAACTATCTCATGAATGTGTGTGTAT 57.546 29.630 0.00 0.00 0.00 2.29
4059 5771 5.976458 ACTTCAAGTTGAAAGGCATCAAAA 58.024 33.333 18.55 0.00 40.76 2.44
4111 5823 5.789643 ACAGCATTGGTGAAAAATACTGT 57.210 34.783 21.85 2.04 36.99 3.55
4147 5859 7.484959 AGACTTTAAAACAGAAAGCGTGAAAAG 59.515 33.333 0.00 0.00 37.41 2.27
4159 5871 9.677567 GCATGTCAAATTAGACTTTAAAACAGA 57.322 29.630 0.00 0.00 39.27 3.41
4568 6280 8.464770 TTCTTGCAGCAATATCAAAATGTAAC 57.535 30.769 8.67 0.00 0.00 2.50
4619 6331 6.311445 CGTAGCAGTGTTAACTTCATCTCAAT 59.689 38.462 7.22 0.00 32.98 2.57
4657 6369 1.671261 CCCTCGCTCAAGTCAAGACTG 60.671 57.143 3.08 0.00 41.58 3.51
5154 6874 7.776933 TTTGAATGATTGAGAATCTACCTCG 57.223 36.000 0.00 0.00 38.72 4.63
5187 6907 4.901849 TCTTACATTATGGGACTGAGGGAG 59.098 45.833 0.00 0.00 0.00 4.30
5188 6908 4.654262 GTCTTACATTATGGGACTGAGGGA 59.346 45.833 0.00 0.00 0.00 4.20
5189 6909 4.501571 CGTCTTACATTATGGGACTGAGGG 60.502 50.000 0.00 0.00 0.00 4.30
5190 6910 4.099573 ACGTCTTACATTATGGGACTGAGG 59.900 45.833 0.00 0.00 0.00 3.86
5191 6911 5.263968 ACGTCTTACATTATGGGACTGAG 57.736 43.478 0.00 0.00 0.00 3.35
5192 6912 5.670792 AACGTCTTACATTATGGGACTGA 57.329 39.130 0.00 0.00 0.00 3.41
5193 6913 6.737254 AAAACGTCTTACATTATGGGACTG 57.263 37.500 0.00 2.61 0.00 3.51
5237 6957 5.122711 CCGTCCCATAATGTAAGACGTTTTT 59.877 40.000 9.63 0.00 46.62 1.94
5238 6958 4.632688 CCGTCCCATAATGTAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
5239 6959 4.081531 TCCGTCCCATAATGTAAGACGTTT 60.082 41.667 9.63 0.00 46.62 3.60
5240 6960 3.448301 TCCGTCCCATAATGTAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
5241 6961 3.025978 TCCGTCCCATAATGTAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
5243 6963 3.244112 CCCTCCGTCCCATAATGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
5244 6964 2.969950 CCCTCCGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
5245 6965 2.969950 TCCCTCCGTCCCATAATGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
5246 6966 2.969950 CTCCCTCCGTCCCATAATGTAA 59.030 50.000 0.00 0.00 0.00 2.41
5247 6967 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
5248 6968 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
5249 6969 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
5250 6970 2.449730 TCTACTCCCTCCGTCCCATAAT 59.550 50.000 0.00 0.00 0.00 1.28
5251 6971 1.854939 TCTACTCCCTCCGTCCCATAA 59.145 52.381 0.00 0.00 0.00 1.90
5252 6972 1.526315 TCTACTCCCTCCGTCCCATA 58.474 55.000 0.00 0.00 0.00 2.74
5253 6973 0.635009 TTCTACTCCCTCCGTCCCAT 59.365 55.000 0.00 0.00 0.00 4.00
5254 6974 0.033405 CTTCTACTCCCTCCGTCCCA 60.033 60.000 0.00 0.00 0.00 4.37
5255 6975 0.033306 ACTTCTACTCCCTCCGTCCC 60.033 60.000 0.00 0.00 0.00 4.46
5256 6976 1.849977 AACTTCTACTCCCTCCGTCC 58.150 55.000 0.00 0.00 0.00 4.79
5257 6977 2.674462 GCAAACTTCTACTCCCTCCGTC 60.674 54.545 0.00 0.00 0.00 4.79
5258 6978 1.275573 GCAAACTTCTACTCCCTCCGT 59.724 52.381 0.00 0.00 0.00 4.69
5259 6979 1.275291 TGCAAACTTCTACTCCCTCCG 59.725 52.381 0.00 0.00 0.00 4.63
5260 6980 3.274288 CATGCAAACTTCTACTCCCTCC 58.726 50.000 0.00 0.00 0.00 4.30
5261 6981 2.680339 GCATGCAAACTTCTACTCCCTC 59.320 50.000 14.21 0.00 0.00 4.30
5262 6982 2.040278 TGCATGCAAACTTCTACTCCCT 59.960 45.455 20.30 0.00 0.00 4.20
5263 6983 2.421424 CTGCATGCAAACTTCTACTCCC 59.579 50.000 22.88 0.00 0.00 4.30
5264 6984 3.338249 TCTGCATGCAAACTTCTACTCC 58.662 45.455 22.88 0.00 0.00 3.85
5265 6985 4.633126 TCATCTGCATGCAAACTTCTACTC 59.367 41.667 22.88 0.00 0.00 2.59
5266 6986 4.582869 TCATCTGCATGCAAACTTCTACT 58.417 39.130 22.88 0.00 0.00 2.57
5267 6987 4.952262 TCATCTGCATGCAAACTTCTAC 57.048 40.909 22.88 0.00 0.00 2.59
5740 7478 8.678199 TGCTCATTCCTACATATAACGAGATAG 58.322 37.037 0.00 0.00 0.00 2.08
5798 7536 2.572290 GTACTTGCAAGGGACAACACT 58.428 47.619 29.18 8.41 0.00 3.55
5992 7730 8.243426 GCTATTGTGTAAAACATTTCCAGATCA 58.757 33.333 0.00 0.00 38.99 2.92
6115 7853 4.783764 TGCTCCGTATGTAGTCCATATG 57.216 45.455 0.00 0.00 41.06 1.78
6209 7947 7.017452 ACTCCCTCCGTATCTAAGTATAAGTCT 59.983 40.741 0.00 0.00 0.00 3.24
6211 7949 7.089106 ACTCCCTCCGTATCTAAGTATAAGT 57.911 40.000 0.00 0.00 0.00 2.24
6218 7956 5.806818 TCATCTACTCCCTCCGTATCTAAG 58.193 45.833 0.00 0.00 0.00 2.18
6223 7961 2.987437 TCCTCATCTACTCCCTCCGTAT 59.013 50.000 0.00 0.00 0.00 3.06
6227 7965 1.783979 TCCTCCTCATCTACTCCCTCC 59.216 57.143 0.00 0.00 0.00 4.30
6602 8347 8.392290 CTGACAACAGATAGGAGCACCTAGATA 61.392 44.444 15.45 0.00 44.55 1.98
6623 8368 1.883638 GCATGACCCAAAGCTCTGACA 60.884 52.381 0.00 0.00 0.00 3.58
6672 8417 6.072838 ACAGCACAAACAATCATCAGTTAGAG 60.073 38.462 0.00 0.00 0.00 2.43
6837 8588 6.206634 TCACAGACCCATTTTGAACATAGTTC 59.793 38.462 3.05 3.05 0.00 3.01
6883 8635 8.735315 TCAGCAGTCTATACTATCAATTCTAGC 58.265 37.037 0.00 0.00 33.48 3.42
6975 9497 6.704493 TGATAGGCCGTAGACAATTGAATTAC 59.296 38.462 13.59 9.96 0.00 1.89
7190 9714 6.285990 GTTTGGTAAGAACTCTAACCAGTCA 58.714 40.000 0.00 0.00 42.66 3.41
7234 9758 4.630894 TCAACAACCTTAACAACTGCAG 57.369 40.909 13.48 13.48 0.00 4.41
7568 10092 8.668510 TTCTCTAAATACAGGCAAGAATGATC 57.331 34.615 0.00 0.00 0.00 2.92
7573 10097 9.601217 GTATCTTTCTCTAAATACAGGCAAGAA 57.399 33.333 0.00 0.00 0.00 2.52
7616 10140 7.041576 ACTGTTACGGTTCTTTAATTCCTGTTC 60.042 37.037 0.00 0.00 0.00 3.18
7688 10212 1.084370 CCGAGATGTCCTTCGGTTGC 61.084 60.000 4.84 0.00 40.49 4.17
7700 10224 1.064946 GTCTGTCGAGGCCGAGATG 59.935 63.158 6.48 3.94 46.52 2.90
7825 10349 0.250513 ATGAGGCCCAAAGACGACTC 59.749 55.000 0.00 0.00 0.00 3.36
7830 10354 3.751479 AAAAACATGAGGCCCAAAGAC 57.249 42.857 0.00 0.00 0.00 3.01
7863 10387 8.294341 TCGATTTTCTTTGTAGTAACAGTGAG 57.706 34.615 0.00 0.00 36.83 3.51
7998 10557 4.460948 AACATGATTCCTGTCATTTGGC 57.539 40.909 0.00 0.00 36.72 4.52
7999 10558 9.090692 GATTAAAACATGATTCCTGTCATTTGG 57.909 33.333 0.00 0.00 36.72 3.28
8006 10565 8.408043 TGACAAGATTAAAACATGATTCCTGT 57.592 30.769 0.00 0.00 0.00 4.00
8008 10567 8.868522 TCTGACAAGATTAAAACATGATTCCT 57.131 30.769 0.00 0.00 0.00 3.36
8018 10577 6.671190 CACTGCACATCTGACAAGATTAAAA 58.329 36.000 0.00 0.00 41.43 1.52
8021 10580 3.686241 GCACTGCACATCTGACAAGATTA 59.314 43.478 0.00 0.00 41.43 1.75
8022 10581 2.486982 GCACTGCACATCTGACAAGATT 59.513 45.455 0.00 0.00 41.43 2.40
8068 10627 9.219603 ACTCAACAGATAATTCGATTTTCTTGA 57.780 29.630 0.00 3.49 29.81 3.02
8075 10634 9.698309 CCAGTATACTCAACAGATAATTCGATT 57.302 33.333 1.26 0.00 0.00 3.34
8084 10643 6.780031 AGCTATGACCAGTATACTCAACAGAT 59.220 38.462 1.26 0.00 0.00 2.90
8091 10650 6.163135 ACCAAAGCTATGACCAGTATACTC 57.837 41.667 1.26 0.00 0.00 2.59
8155 10749 4.638865 ACCAGAAAAGACAACTTGGTGTAC 59.361 41.667 0.00 0.00 36.39 2.90
8164 10758 5.452777 GCTGTATTCACCAGAAAAGACAAC 58.547 41.667 0.00 0.00 37.29 3.32
8166 10760 4.072131 GGCTGTATTCACCAGAAAAGACA 58.928 43.478 0.00 0.00 37.29 3.41
8167 10761 4.072131 TGGCTGTATTCACCAGAAAAGAC 58.928 43.478 0.00 0.00 37.29 3.01
8168 10762 4.365514 TGGCTGTATTCACCAGAAAAGA 57.634 40.909 0.00 0.00 37.29 2.52
8175 10769 0.403655 TTGGCTGGCTGTATTCACCA 59.596 50.000 2.00 0.00 0.00 4.17
8176 10770 1.544724 TTTGGCTGGCTGTATTCACC 58.455 50.000 2.00 0.00 0.00 4.02
8177 10771 2.754552 TCATTTGGCTGGCTGTATTCAC 59.245 45.455 2.00 0.00 0.00 3.18
8178 10772 2.754552 GTCATTTGGCTGGCTGTATTCA 59.245 45.455 2.00 0.00 0.00 2.57
8179 10773 2.754552 TGTCATTTGGCTGGCTGTATTC 59.245 45.455 2.00 0.00 0.00 1.75
8180 10774 2.756760 CTGTCATTTGGCTGGCTGTATT 59.243 45.455 2.00 0.00 0.00 1.89
8181 10775 2.372264 CTGTCATTTGGCTGGCTGTAT 58.628 47.619 2.00 0.00 0.00 2.29
8182 10776 1.614051 CCTGTCATTTGGCTGGCTGTA 60.614 52.381 2.00 0.00 32.12 2.74
8183 10777 0.896940 CCTGTCATTTGGCTGGCTGT 60.897 55.000 2.00 0.00 32.12 4.40
8184 10778 0.609957 TCCTGTCATTTGGCTGGCTG 60.610 55.000 2.00 0.00 38.45 4.85
8185 10779 0.112995 TTCCTGTCATTTGGCTGGCT 59.887 50.000 2.00 0.00 38.45 4.75
8186 10780 1.135721 GATTCCTGTCATTTGGCTGGC 59.864 52.381 3.42 0.00 38.45 4.85
8187 10781 2.449464 TGATTCCTGTCATTTGGCTGG 58.551 47.619 1.95 1.95 39.72 4.85
8188 10782 3.446161 ACATGATTCCTGTCATTTGGCTG 59.554 43.478 0.00 0.00 36.72 4.85
8189 10783 3.705051 ACATGATTCCTGTCATTTGGCT 58.295 40.909 0.00 0.00 36.72 4.75
8190 10784 4.460948 AACATGATTCCTGTCATTTGGC 57.539 40.909 0.00 0.00 36.72 4.52
8191 10785 9.090692 GATTAAAACATGATTCCTGTCATTTGG 57.909 33.333 0.00 0.00 36.72 3.28
8192 10786 9.865321 AGATTAAAACATGATTCCTGTCATTTG 57.135 29.630 0.00 0.00 36.72 2.32
8194 10788 9.865321 CAAGATTAAAACATGATTCCTGTCATT 57.135 29.630 0.00 0.00 36.72 2.57
8195 10789 9.028284 ACAAGATTAAAACATGATTCCTGTCAT 57.972 29.630 0.00 0.00 39.34 3.06
8196 10790 8.408043 ACAAGATTAAAACATGATTCCTGTCA 57.592 30.769 0.00 0.00 0.00 3.58
8197 10791 8.514594 TGACAAGATTAAAACATGATTCCTGTC 58.485 33.333 0.00 0.00 0.00 3.51
8198 10792 8.408043 TGACAAGATTAAAACATGATTCCTGT 57.592 30.769 0.00 0.00 0.00 4.00
8199 10793 8.733458 TCTGACAAGATTAAAACATGATTCCTG 58.267 33.333 0.00 0.00 0.00 3.86
8200 10794 8.868522 TCTGACAAGATTAAAACATGATTCCT 57.131 30.769 0.00 0.00 0.00 3.36
8210 10804 6.671190 CACTGCACATCTGACAAGATTAAAA 58.329 36.000 0.00 0.00 41.43 1.52
8214 10808 2.486982 GCACTGCACATCTGACAAGATT 59.513 45.455 0.00 0.00 41.43 2.40
8250 10844 5.560722 TCAGGAACCTTGATAACACTCAA 57.439 39.130 0.00 0.00 34.14 3.02
8251 10845 5.560722 TTCAGGAACCTTGATAACACTCA 57.439 39.130 0.00 0.00 0.00 3.41
8252 10846 6.314896 CAGATTCAGGAACCTTGATAACACTC 59.685 42.308 0.00 0.00 0.00 3.51
8253 10847 6.176183 CAGATTCAGGAACCTTGATAACACT 58.824 40.000 0.00 0.00 0.00 3.55
8256 10850 4.943705 TGCAGATTCAGGAACCTTGATAAC 59.056 41.667 0.00 0.00 0.00 1.89
8257 10851 5.178096 TGCAGATTCAGGAACCTTGATAA 57.822 39.130 0.00 0.00 0.00 1.75
8258 10852 4.842531 TGCAGATTCAGGAACCTTGATA 57.157 40.909 0.00 0.00 0.00 2.15
8259 10853 3.726557 TGCAGATTCAGGAACCTTGAT 57.273 42.857 0.00 0.00 0.00 2.57
8357 11006 8.424918 TGGGAACAATTACTTTTATTTTGCTCA 58.575 29.630 0.00 0.00 37.44 4.26
8358 11007 8.708742 GTGGGAACAATTACTTTTATTTTGCTC 58.291 33.333 0.00 0.00 46.06 4.26
8466 11117 3.539604 GATCCACTGTCCTGATTTCTGG 58.460 50.000 0.00 0.00 36.43 3.86
8499 11150 2.517875 GCGCTGATTGCCCCAGAT 60.518 61.111 0.00 0.00 38.78 2.90
8646 11297 0.450583 TCGACTACTGGTCATGCGTC 59.549 55.000 0.00 0.00 44.70 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.