Multiple sequence alignment - TraesCS5D01G131200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G131200 chr5D 100.000 5640 0 0 1989 7628 208508013 208513652 0.000000e+00 10416.0
1 TraesCS5D01G131200 chr5D 100.000 1482 0 0 1 1482 208506025 208507506 0.000000e+00 2737.0
2 TraesCS5D01G131200 chr5D 97.222 36 0 1 7439 7474 208513432 208513466 8.270000e-05 60.2
3 TraesCS5D01G131200 chr5D 97.222 36 0 1 7408 7442 208513463 208513498 8.270000e-05 60.2
4 TraesCS5D01G131200 chr5A 97.155 5202 117 12 1989 7174 269275310 269280496 0.000000e+00 8757.0
5 TraesCS5D01G131200 chr5A 96.369 1019 26 7 466 1482 269274190 269275199 0.000000e+00 1666.0
6 TraesCS5D01G131200 chr5A 78.837 430 27 25 7211 7628 269280879 269281256 1.660000e-56 231.0
7 TraesCS5D01G131200 chr5B 97.458 3186 66 7 3993 7174 221903125 221906299 0.000000e+00 5421.0
8 TraesCS5D01G131200 chr5B 96.466 2009 54 12 1989 3994 221901051 221903045 0.000000e+00 3301.0
9 TraesCS5D01G131200 chr5B 95.428 1028 34 6 466 1482 221899915 221900940 0.000000e+00 1626.0
10 TraesCS5D01G131200 chr5B 81.452 372 36 16 7172 7543 221906338 221906676 2.710000e-69 274.0
11 TraesCS5D01G131200 chr5B 93.651 63 4 0 7566 7628 221906677 221906739 2.270000e-15 95.3
12 TraesCS5D01G131200 chr2D 96.488 484 17 0 1 484 635113343 635112860 0.000000e+00 800.0
13 TraesCS5D01G131200 chr6D 95.868 484 20 0 1 484 35516213 35516696 0.000000e+00 784.0
14 TraesCS5D01G131200 chr6D 92.623 488 32 4 1 486 454868655 454869140 0.000000e+00 699.0
15 TraesCS5D01G131200 chr7A 94.021 485 28 1 1 484 635584358 635584842 0.000000e+00 734.0
16 TraesCS5D01G131200 chr1D 93.033 488 25 9 1 484 280706104 280705622 0.000000e+00 704.0
17 TraesCS5D01G131200 chr1D 92.449 490 29 6 1 484 449707278 449706791 0.000000e+00 693.0
18 TraesCS5D01G131200 chr3A 92.769 484 34 1 1 484 599790173 599790655 0.000000e+00 699.0
19 TraesCS5D01G131200 chr6B 92.387 486 35 2 1 484 548449598 548450083 0.000000e+00 691.0
20 TraesCS5D01G131200 chr3D 92.418 488 29 8 1 484 58425341 58425824 0.000000e+00 689.0
21 TraesCS5D01G131200 chr3D 86.391 169 23 0 6459 6627 547895630 547895462 1.310000e-42 185.0
22 TraesCS5D01G131200 chr3D 79.204 226 30 12 5736 5957 547907954 547907742 2.870000e-29 141.0
23 TraesCS5D01G131200 chr4B 75.339 1326 264 50 4785 6075 126334257 126335554 5.130000e-161 579.0
24 TraesCS5D01G131200 chr4D 74.697 1320 274 48 4785 6075 89430299 89431587 4.050000e-147 532.0
25 TraesCS5D01G131200 chr4D 85.000 200 28 2 2967 3165 89428705 89428903 1.300000e-47 202.0
26 TraesCS5D01G131200 chr4A 74.547 1324 281 46 4779 6075 501970515 501971809 1.890000e-145 527.0
27 TraesCS5D01G131200 chr4A 84.000 200 30 2 2967 3165 501968872 501969070 2.810000e-44 191.0
28 TraesCS5D01G131200 chr2B 90.000 80 8 0 5963 6042 285052752 285052831 3.770000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G131200 chr5D 208506025 208513652 7627 False 3318.350000 10416 98.6110 1 7628 4 chr5D.!!$F1 7627
1 TraesCS5D01G131200 chr5A 269274190 269281256 7066 False 3551.333333 8757 90.7870 466 7628 3 chr5A.!!$F1 7162
2 TraesCS5D01G131200 chr5B 221899915 221906739 6824 False 2143.460000 5421 92.8910 466 7628 5 chr5B.!!$F1 7162
3 TraesCS5D01G131200 chr4B 126334257 126335554 1297 False 579.000000 579 75.3390 4785 6075 1 chr4B.!!$F1 1290
4 TraesCS5D01G131200 chr4D 89428705 89431587 2882 False 367.000000 532 79.8485 2967 6075 2 chr4D.!!$F1 3108
5 TraesCS5D01G131200 chr4A 501968872 501971809 2937 False 359.000000 527 79.2735 2967 6075 2 chr4A.!!$F1 3108

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
278 279 0.033781 TCCCGGTTCCACACTTTACG 59.966 55.000 0.00 0.00 0.00 3.18 F
279 280 0.249996 CCCGGTTCCACACTTTACGT 60.250 55.000 0.00 0.00 0.00 3.57 F
808 818 0.451783 GCCATTAACCAACTGCCTCG 59.548 55.000 0.00 0.00 0.00 4.63 F
1464 1475 3.061563 CGGAGCATTTCGTGTTAATTCGA 59.938 43.478 1.81 1.81 0.00 3.71 F
2553 2567 1.995484 CGGACTGTACAAGCATGTCAG 59.005 52.381 15.33 15.33 41.05 3.51 F
3687 3867 0.813610 CAACTTGTGTGAGGCGGTGA 60.814 55.000 0.00 0.00 0.00 4.02 F
3700 3880 1.538419 GGCGGTGAGTAACTAGATGCC 60.538 57.143 0.00 0.00 0.00 4.40 F
4168 4491 1.600023 TCAAGGTTTACGCCCAACAG 58.400 50.000 0.00 0.00 0.00 3.16 F
5257 5622 2.132762 CCTTCACGTGTACCTGTTGTC 58.867 52.381 16.51 0.00 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1434 1445 0.871722 CGAAATGCTCCGACAAACCA 59.128 50.000 0.00 0.00 0.00 3.67 R
1436 1447 1.263217 ACACGAAATGCTCCGACAAAC 59.737 47.619 0.00 0.00 0.00 2.93 R
2525 2539 2.165845 GCTTGTACAGTCCGTATCCAGT 59.834 50.000 0.00 0.00 31.20 4.00 R
2916 2935 3.870419 TCTTTCAAGCAATTGCAACCAAC 59.130 39.130 30.89 0.87 45.16 3.77 R
4514 4847 2.755655 ACATCGTTGGGTCTCTGTAGAG 59.244 50.000 2.45 2.45 43.36 2.43 R
5434 5799 2.450476 GGACTTGCCTGAAATCCATGT 58.550 47.619 0.00 0.00 0.00 3.21 R
6100 6470 9.507329 AATGTATCTGGTATATAAGTTGGCAAG 57.493 33.333 0.00 0.00 0.00 4.01 R
6264 6634 7.158021 CCCAGATTATAGTTCAGATCCTCAAC 58.842 42.308 0.00 0.00 0.00 3.18 R
7563 8310 0.036294 ACCTTACGCTTCAAGCCTCC 60.036 55.000 3.08 0.00 38.18 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.855255 TCAACTTGATGGTTGAGTGGA 57.145 42.857 6.03 0.00 46.91 4.02
21 22 4.371624 TCAACTTGATGGTTGAGTGGAT 57.628 40.909 6.03 0.00 46.91 3.41
22 23 4.728772 TCAACTTGATGGTTGAGTGGATT 58.271 39.130 6.03 0.00 46.91 3.01
23 24 4.520111 TCAACTTGATGGTTGAGTGGATTG 59.480 41.667 6.03 0.00 46.91 2.67
24 25 4.104383 ACTTGATGGTTGAGTGGATTGT 57.896 40.909 0.00 0.00 0.00 2.71
25 26 5.241403 ACTTGATGGTTGAGTGGATTGTA 57.759 39.130 0.00 0.00 0.00 2.41
26 27 5.003804 ACTTGATGGTTGAGTGGATTGTAC 58.996 41.667 0.00 0.00 0.00 2.90
27 28 4.908601 TGATGGTTGAGTGGATTGTACT 57.091 40.909 0.00 0.00 0.00 2.73
28 29 4.832248 TGATGGTTGAGTGGATTGTACTC 58.168 43.478 0.00 0.00 43.73 2.59
29 30 4.532126 TGATGGTTGAGTGGATTGTACTCT 59.468 41.667 0.00 0.00 43.79 3.24
30 31 4.974645 TGGTTGAGTGGATTGTACTCTT 57.025 40.909 0.00 0.00 43.79 2.85
31 32 5.304686 TGGTTGAGTGGATTGTACTCTTT 57.695 39.130 0.00 0.00 43.79 2.52
32 33 5.690865 TGGTTGAGTGGATTGTACTCTTTT 58.309 37.500 0.00 0.00 43.79 2.27
33 34 6.126409 TGGTTGAGTGGATTGTACTCTTTTT 58.874 36.000 0.00 0.00 43.79 1.94
34 35 6.262273 TGGTTGAGTGGATTGTACTCTTTTTC 59.738 38.462 0.00 0.00 43.79 2.29
35 36 6.294010 GGTTGAGTGGATTGTACTCTTTTTCC 60.294 42.308 0.00 0.00 43.79 3.13
36 37 5.313712 TGAGTGGATTGTACTCTTTTTCCC 58.686 41.667 0.00 0.00 43.79 3.97
37 38 5.073144 TGAGTGGATTGTACTCTTTTTCCCT 59.927 40.000 0.00 0.00 43.79 4.20
38 39 5.953571 AGTGGATTGTACTCTTTTTCCCTT 58.046 37.500 0.00 0.00 0.00 3.95
39 40 5.770162 AGTGGATTGTACTCTTTTTCCCTTG 59.230 40.000 0.00 0.00 0.00 3.61
40 41 5.768164 GTGGATTGTACTCTTTTTCCCTTGA 59.232 40.000 0.00 0.00 0.00 3.02
41 42 6.003950 TGGATTGTACTCTTTTTCCCTTGAG 58.996 40.000 0.00 0.00 0.00 3.02
42 43 6.004574 GGATTGTACTCTTTTTCCCTTGAGT 58.995 40.000 0.00 0.00 41.81 3.41
43 44 6.072452 GGATTGTACTCTTTTTCCCTTGAGTG 60.072 42.308 0.00 0.00 39.69 3.51
44 45 5.623956 TGTACTCTTTTTCCCTTGAGTGA 57.376 39.130 0.00 0.00 39.69 3.41
45 46 5.611374 TGTACTCTTTTTCCCTTGAGTGAG 58.389 41.667 0.00 0.00 39.69 3.51
46 47 4.779993 ACTCTTTTTCCCTTGAGTGAGT 57.220 40.909 0.00 0.00 38.22 3.41
47 48 5.117406 ACTCTTTTTCCCTTGAGTGAGTT 57.883 39.130 0.00 0.00 38.22 3.01
48 49 5.510430 ACTCTTTTTCCCTTGAGTGAGTTT 58.490 37.500 0.00 0.00 38.22 2.66
49 50 5.952347 ACTCTTTTTCCCTTGAGTGAGTTTT 59.048 36.000 0.00 0.00 38.22 2.43
50 51 6.095580 ACTCTTTTTCCCTTGAGTGAGTTTTC 59.904 38.462 0.00 0.00 38.22 2.29
51 52 5.359860 TCTTTTTCCCTTGAGTGAGTTTTCC 59.640 40.000 0.00 0.00 0.00 3.13
52 53 4.519906 TTTCCCTTGAGTGAGTTTTCCT 57.480 40.909 0.00 0.00 0.00 3.36
53 54 3.492102 TCCCTTGAGTGAGTTTTCCTG 57.508 47.619 0.00 0.00 0.00 3.86
54 55 3.045634 TCCCTTGAGTGAGTTTTCCTGA 58.954 45.455 0.00 0.00 0.00 3.86
55 56 3.652869 TCCCTTGAGTGAGTTTTCCTGAT 59.347 43.478 0.00 0.00 0.00 2.90
56 57 3.755378 CCCTTGAGTGAGTTTTCCTGATG 59.245 47.826 0.00 0.00 0.00 3.07
57 58 4.392940 CCTTGAGTGAGTTTTCCTGATGT 58.607 43.478 0.00 0.00 0.00 3.06
58 59 4.823989 CCTTGAGTGAGTTTTCCTGATGTT 59.176 41.667 0.00 0.00 0.00 2.71
59 60 5.300286 CCTTGAGTGAGTTTTCCTGATGTTT 59.700 40.000 0.00 0.00 0.00 2.83
60 61 6.377327 TTGAGTGAGTTTTCCTGATGTTTC 57.623 37.500 0.00 0.00 0.00 2.78
61 62 5.684704 TGAGTGAGTTTTCCTGATGTTTCT 58.315 37.500 0.00 0.00 0.00 2.52
62 63 5.760253 TGAGTGAGTTTTCCTGATGTTTCTC 59.240 40.000 0.00 0.00 0.00 2.87
63 64 5.684704 AGTGAGTTTTCCTGATGTTTCTCA 58.315 37.500 0.00 0.00 0.00 3.27
64 65 5.529060 AGTGAGTTTTCCTGATGTTTCTCAC 59.471 40.000 12.18 12.18 45.84 3.51
65 66 5.296780 GTGAGTTTTCCTGATGTTTCTCACA 59.703 40.000 14.33 0.00 45.25 3.58
66 67 5.296780 TGAGTTTTCCTGATGTTTCTCACAC 59.703 40.000 0.00 0.00 38.61 3.82
67 68 4.273480 AGTTTTCCTGATGTTTCTCACACG 59.727 41.667 0.00 0.00 38.61 4.49
68 69 3.744238 TTCCTGATGTTTCTCACACGA 57.256 42.857 0.00 0.00 38.61 4.35
69 70 3.303881 TCCTGATGTTTCTCACACGAG 57.696 47.619 0.00 0.00 38.61 4.18
70 71 2.029020 TCCTGATGTTTCTCACACGAGG 60.029 50.000 0.00 0.00 38.61 4.63
71 72 2.289072 CCTGATGTTTCTCACACGAGGT 60.289 50.000 0.00 0.00 38.61 3.85
72 73 3.393800 CTGATGTTTCTCACACGAGGTT 58.606 45.455 0.00 0.00 38.61 3.50
73 74 3.804036 TGATGTTTCTCACACGAGGTTT 58.196 40.909 0.00 0.00 38.61 3.27
74 75 4.196193 TGATGTTTCTCACACGAGGTTTT 58.804 39.130 0.00 0.00 38.61 2.43
75 76 4.638421 TGATGTTTCTCACACGAGGTTTTT 59.362 37.500 0.00 0.00 38.61 1.94
76 77 4.349663 TGTTTCTCACACGAGGTTTTTG 57.650 40.909 0.00 0.00 39.95 2.44
77 78 4.004314 TGTTTCTCACACGAGGTTTTTGA 58.996 39.130 0.00 0.00 39.95 2.69
78 79 4.142773 TGTTTCTCACACGAGGTTTTTGAC 60.143 41.667 0.00 0.00 39.95 3.18
79 80 2.198406 TCTCACACGAGGTTTTTGACG 58.802 47.619 0.00 0.00 39.95 4.35
80 81 2.159212 TCTCACACGAGGTTTTTGACGA 60.159 45.455 0.00 0.00 39.95 4.20
81 82 2.198406 TCACACGAGGTTTTTGACGAG 58.802 47.619 0.00 0.00 0.00 4.18
82 83 1.260561 CACACGAGGTTTTTGACGAGG 59.739 52.381 0.00 0.00 0.00 4.63
83 84 0.234884 CACGAGGTTTTTGACGAGGC 59.765 55.000 0.00 0.00 0.00 4.70
84 85 0.179067 ACGAGGTTTTTGACGAGGCA 60.179 50.000 0.00 0.00 0.00 4.75
85 86 0.941542 CGAGGTTTTTGACGAGGCAA 59.058 50.000 0.00 0.00 0.00 4.52
86 87 1.535462 CGAGGTTTTTGACGAGGCAAT 59.465 47.619 0.00 0.00 0.00 3.56
87 88 2.031157 CGAGGTTTTTGACGAGGCAATT 60.031 45.455 0.00 0.00 0.00 2.32
88 89 3.565516 GAGGTTTTTGACGAGGCAATTC 58.434 45.455 0.00 0.00 0.00 2.17
89 90 2.031157 AGGTTTTTGACGAGGCAATTCG 60.031 45.455 0.00 3.39 45.70 3.34
118 119 5.862924 ACAACAATGTATACTGTGTGCTC 57.137 39.130 11.29 0.00 38.24 4.26
119 120 5.551233 ACAACAATGTATACTGTGTGCTCT 58.449 37.500 11.29 0.00 38.24 4.09
120 121 5.997746 ACAACAATGTATACTGTGTGCTCTT 59.002 36.000 11.29 0.00 38.24 2.85
121 122 6.486657 ACAACAATGTATACTGTGTGCTCTTT 59.513 34.615 11.29 0.00 38.24 2.52
122 123 6.727824 ACAATGTATACTGTGTGCTCTTTC 57.272 37.500 4.17 0.00 0.00 2.62
123 124 6.467677 ACAATGTATACTGTGTGCTCTTTCT 58.532 36.000 4.17 0.00 0.00 2.52
124 125 6.591834 ACAATGTATACTGTGTGCTCTTTCTC 59.408 38.462 4.17 0.00 0.00 2.87
125 126 5.073311 TGTATACTGTGTGCTCTTTCTCC 57.927 43.478 4.17 0.00 0.00 3.71
126 127 4.526650 TGTATACTGTGTGCTCTTTCTCCA 59.473 41.667 4.17 0.00 0.00 3.86
127 128 4.833478 ATACTGTGTGCTCTTTCTCCAT 57.167 40.909 0.00 0.00 0.00 3.41
128 129 5.939764 ATACTGTGTGCTCTTTCTCCATA 57.060 39.130 0.00 0.00 0.00 2.74
129 130 4.833478 ACTGTGTGCTCTTTCTCCATAT 57.167 40.909 0.00 0.00 0.00 1.78
130 131 5.171339 ACTGTGTGCTCTTTCTCCATATT 57.829 39.130 0.00 0.00 0.00 1.28
131 132 5.564550 ACTGTGTGCTCTTTCTCCATATTT 58.435 37.500 0.00 0.00 0.00 1.40
132 133 6.006449 ACTGTGTGCTCTTTCTCCATATTTT 58.994 36.000 0.00 0.00 0.00 1.82
133 134 6.491403 ACTGTGTGCTCTTTCTCCATATTTTT 59.509 34.615 0.00 0.00 0.00 1.94
151 152 3.528597 TTTTTCCACTGGGTTTTTCGG 57.471 42.857 0.00 0.00 34.93 4.30
152 153 2.438800 TTTCCACTGGGTTTTTCGGA 57.561 45.000 0.00 0.00 34.93 4.55
153 154 1.975660 TTCCACTGGGTTTTTCGGAG 58.024 50.000 0.00 0.00 34.93 4.63
154 155 0.841289 TCCACTGGGTTTTTCGGAGT 59.159 50.000 0.00 0.00 34.93 3.85
155 156 1.213430 TCCACTGGGTTTTTCGGAGTT 59.787 47.619 0.00 0.00 34.93 3.01
156 157 2.028876 CCACTGGGTTTTTCGGAGTTT 58.971 47.619 0.00 0.00 0.00 2.66
157 158 2.429250 CCACTGGGTTTTTCGGAGTTTT 59.571 45.455 0.00 0.00 0.00 2.43
158 159 3.443976 CACTGGGTTTTTCGGAGTTTTG 58.556 45.455 0.00 0.00 0.00 2.44
159 160 3.129638 CACTGGGTTTTTCGGAGTTTTGA 59.870 43.478 0.00 0.00 0.00 2.69
160 161 3.380320 ACTGGGTTTTTCGGAGTTTTGAG 59.620 43.478 0.00 0.00 0.00 3.02
161 162 2.691011 TGGGTTTTTCGGAGTTTTGAGG 59.309 45.455 0.00 0.00 0.00 3.86
162 163 2.545113 GGGTTTTTCGGAGTTTTGAGGC 60.545 50.000 0.00 0.00 0.00 4.70
163 164 2.100087 GGTTTTTCGGAGTTTTGAGGCA 59.900 45.455 0.00 0.00 0.00 4.75
164 165 3.243737 GGTTTTTCGGAGTTTTGAGGCAT 60.244 43.478 0.00 0.00 0.00 4.40
165 166 3.641437 TTTTCGGAGTTTTGAGGCATG 57.359 42.857 0.00 0.00 0.00 4.06
166 167 1.533625 TTCGGAGTTTTGAGGCATGG 58.466 50.000 0.00 0.00 0.00 3.66
167 168 0.690192 TCGGAGTTTTGAGGCATGGA 59.310 50.000 0.00 0.00 0.00 3.41
168 169 1.281867 TCGGAGTTTTGAGGCATGGAT 59.718 47.619 0.00 0.00 0.00 3.41
169 170 2.503765 TCGGAGTTTTGAGGCATGGATA 59.496 45.455 0.00 0.00 0.00 2.59
170 171 3.136443 TCGGAGTTTTGAGGCATGGATAT 59.864 43.478 0.00 0.00 0.00 1.63
171 172 4.346709 TCGGAGTTTTGAGGCATGGATATA 59.653 41.667 0.00 0.00 0.00 0.86
172 173 4.452455 CGGAGTTTTGAGGCATGGATATAC 59.548 45.833 0.00 0.00 0.00 1.47
173 174 4.452455 GGAGTTTTGAGGCATGGATATACG 59.548 45.833 0.00 0.00 0.00 3.06
174 175 4.389374 AGTTTTGAGGCATGGATATACGG 58.611 43.478 0.00 0.00 0.00 4.02
175 176 4.102524 AGTTTTGAGGCATGGATATACGGA 59.897 41.667 0.00 0.00 0.00 4.69
176 177 4.908601 TTTGAGGCATGGATATACGGAT 57.091 40.909 0.00 0.00 0.00 4.18
177 178 6.013725 AGTTTTGAGGCATGGATATACGGATA 60.014 38.462 0.00 0.00 0.00 2.59
178 179 6.367374 TTTGAGGCATGGATATACGGATAA 57.633 37.500 0.00 0.00 0.00 1.75
179 180 6.560003 TTGAGGCATGGATATACGGATAAT 57.440 37.500 0.00 0.00 0.00 1.28
180 181 6.560003 TGAGGCATGGATATACGGATAATT 57.440 37.500 0.00 0.00 0.00 1.40
181 182 7.669089 TGAGGCATGGATATACGGATAATTA 57.331 36.000 0.00 0.00 0.00 1.40
182 183 7.497595 TGAGGCATGGATATACGGATAATTAC 58.502 38.462 0.00 0.00 0.00 1.89
183 184 6.827727 AGGCATGGATATACGGATAATTACC 58.172 40.000 0.00 0.00 0.00 2.85
184 185 5.995897 GGCATGGATATACGGATAATTACCC 59.004 44.000 0.00 0.00 0.00 3.69
185 186 6.408776 GGCATGGATATACGGATAATTACCCA 60.409 42.308 0.00 0.00 0.00 4.51
186 187 7.051623 GCATGGATATACGGATAATTACCCAA 58.948 38.462 0.00 0.00 0.00 4.12
187 188 7.226720 GCATGGATATACGGATAATTACCCAAG 59.773 40.741 0.00 0.00 0.00 3.61
188 189 7.190335 TGGATATACGGATAATTACCCAAGG 57.810 40.000 0.00 0.00 0.00 3.61
189 190 6.157297 TGGATATACGGATAATTACCCAAGGG 59.843 42.308 2.91 2.91 42.03 3.95
200 201 2.440599 CCAAGGGGGAGTGTTGGG 59.559 66.667 0.00 0.00 40.01 4.12
201 202 2.160171 CCAAGGGGGAGTGTTGGGA 61.160 63.158 0.00 0.00 40.01 4.37
202 203 1.725169 CCAAGGGGGAGTGTTGGGAA 61.725 60.000 0.00 0.00 40.01 3.97
203 204 0.187361 CAAGGGGGAGTGTTGGGAAA 59.813 55.000 0.00 0.00 0.00 3.13
204 205 0.187606 AAGGGGGAGTGTTGGGAAAC 59.812 55.000 0.00 0.00 0.00 2.78
217 218 4.629523 GAAACCGGCCCACCACGA 62.630 66.667 0.00 0.00 34.57 4.35
218 219 4.636435 AAACCGGCCCACCACGAG 62.636 66.667 0.00 0.00 34.57 4.18
243 244 4.305036 GCGGCTAGCGCATGAAGC 62.305 66.667 21.32 12.81 38.10 3.86
252 253 3.518003 GCATGAAGCGCTTGGGAT 58.482 55.556 30.47 13.59 0.00 3.85
253 254 2.706636 GCATGAAGCGCTTGGGATA 58.293 52.632 30.47 8.71 0.00 2.59
254 255 0.590195 GCATGAAGCGCTTGGGATAG 59.410 55.000 30.47 11.91 0.00 2.08
255 256 0.590195 CATGAAGCGCTTGGGATAGC 59.410 55.000 30.47 11.80 37.80 2.97
256 257 0.536006 ATGAAGCGCTTGGGATAGCC 60.536 55.000 30.47 10.98 37.90 3.93
266 267 2.447959 GGATAGCCCCTCCCGGTT 60.448 66.667 0.00 0.00 0.00 4.44
267 268 2.517798 GGATAGCCCCTCCCGGTTC 61.518 68.421 0.00 0.00 0.00 3.62
268 269 2.447959 ATAGCCCCTCCCGGTTCC 60.448 66.667 0.00 0.00 0.00 3.62
269 270 3.341469 ATAGCCCCTCCCGGTTCCA 62.341 63.158 0.00 0.00 0.00 3.53
272 273 4.029809 CCCCTCCCGGTTCCACAC 62.030 72.222 0.00 0.00 0.00 3.82
273 274 2.928396 CCCTCCCGGTTCCACACT 60.928 66.667 0.00 0.00 0.00 3.55
274 275 2.526046 CCCTCCCGGTTCCACACTT 61.526 63.158 0.00 0.00 0.00 3.16
275 276 1.454539 CCTCCCGGTTCCACACTTT 59.545 57.895 0.00 0.00 0.00 2.66
276 277 0.688487 CCTCCCGGTTCCACACTTTA 59.312 55.000 0.00 0.00 0.00 1.85
277 278 1.609841 CCTCCCGGTTCCACACTTTAC 60.610 57.143 0.00 0.00 0.00 2.01
278 279 0.033781 TCCCGGTTCCACACTTTACG 59.966 55.000 0.00 0.00 0.00 3.18
279 280 0.249996 CCCGGTTCCACACTTTACGT 60.250 55.000 0.00 0.00 0.00 3.57
280 281 1.585297 CCGGTTCCACACTTTACGTT 58.415 50.000 0.00 0.00 0.00 3.99
281 282 2.547642 CCCGGTTCCACACTTTACGTTA 60.548 50.000 0.00 0.00 0.00 3.18
282 283 3.129871 CCGGTTCCACACTTTACGTTAA 58.870 45.455 0.00 0.00 0.00 2.01
283 284 3.559242 CCGGTTCCACACTTTACGTTAAA 59.441 43.478 0.00 0.00 0.00 1.52
284 285 4.213906 CCGGTTCCACACTTTACGTTAAAT 59.786 41.667 0.00 0.00 0.00 1.40
285 286 5.141568 CGGTTCCACACTTTACGTTAAATG 58.858 41.667 0.00 0.00 0.00 2.32
286 287 5.454520 GGTTCCACACTTTACGTTAAATGG 58.545 41.667 0.00 0.00 30.32 3.16
287 288 5.454520 GTTCCACACTTTACGTTAAATGGG 58.545 41.667 0.00 0.00 30.17 4.00
288 289 4.716794 TCCACACTTTACGTTAAATGGGT 58.283 39.130 0.00 0.00 30.17 4.51
289 290 5.862845 TCCACACTTTACGTTAAATGGGTA 58.137 37.500 0.00 0.00 30.17 3.69
290 291 5.700373 TCCACACTTTACGTTAAATGGGTAC 59.300 40.000 0.00 0.00 30.17 3.34
291 292 5.702209 CCACACTTTACGTTAAATGGGTACT 59.298 40.000 0.00 0.00 0.00 2.73
292 293 6.205270 CCACACTTTACGTTAAATGGGTACTT 59.795 38.462 0.00 0.00 0.00 2.24
293 294 7.387397 CCACACTTTACGTTAAATGGGTACTTA 59.613 37.037 0.00 0.00 0.00 2.24
294 295 8.938906 CACACTTTACGTTAAATGGGTACTTAT 58.061 33.333 0.00 0.00 0.00 1.73
295 296 9.154847 ACACTTTACGTTAAATGGGTACTTATC 57.845 33.333 0.00 0.00 0.00 1.75
296 297 9.374838 CACTTTACGTTAAATGGGTACTTATCT 57.625 33.333 0.00 0.00 0.00 1.98
297 298 9.591792 ACTTTACGTTAAATGGGTACTTATCTC 57.408 33.333 0.00 0.00 0.00 2.75
298 299 9.813446 CTTTACGTTAAATGGGTACTTATCTCT 57.187 33.333 0.00 0.00 0.00 3.10
300 301 9.590451 TTACGTTAAATGGGTACTTATCTCTTG 57.410 33.333 0.00 0.00 0.00 3.02
301 302 7.844009 ACGTTAAATGGGTACTTATCTCTTGA 58.156 34.615 0.00 0.00 0.00 3.02
302 303 7.763071 ACGTTAAATGGGTACTTATCTCTTGAC 59.237 37.037 0.00 0.00 0.00 3.18
303 304 7.224167 CGTTAAATGGGTACTTATCTCTTGACC 59.776 40.741 0.00 0.00 0.00 4.02
304 305 5.632034 AATGGGTACTTATCTCTTGACCC 57.368 43.478 0.75 0.75 45.75 4.46
305 306 4.348020 TGGGTACTTATCTCTTGACCCT 57.652 45.455 9.22 0.00 45.74 4.34
306 307 4.030913 TGGGTACTTATCTCTTGACCCTG 58.969 47.826 9.22 0.00 45.74 4.45
307 308 4.031611 GGGTACTTATCTCTTGACCCTGT 58.968 47.826 0.50 0.00 42.80 4.00
308 309 5.206587 GGGTACTTATCTCTTGACCCTGTA 58.793 45.833 0.50 0.00 42.80 2.74
309 310 5.068855 GGGTACTTATCTCTTGACCCTGTAC 59.931 48.000 0.50 0.00 42.80 2.90
310 311 5.068855 GGTACTTATCTCTTGACCCTGTACC 59.931 48.000 0.00 0.00 40.00 3.34
311 312 4.031611 ACTTATCTCTTGACCCTGTACCC 58.968 47.826 0.00 0.00 0.00 3.69
312 313 1.880941 ATCTCTTGACCCTGTACCCC 58.119 55.000 0.00 0.00 0.00 4.95
313 314 0.790993 TCTCTTGACCCTGTACCCCT 59.209 55.000 0.00 0.00 0.00 4.79
314 315 2.005350 TCTCTTGACCCTGTACCCCTA 58.995 52.381 0.00 0.00 0.00 3.53
315 316 2.590611 TCTCTTGACCCTGTACCCCTAT 59.409 50.000 0.00 0.00 0.00 2.57
316 317 3.795545 TCTCTTGACCCTGTACCCCTATA 59.204 47.826 0.00 0.00 0.00 1.31
317 318 4.422592 TCTCTTGACCCTGTACCCCTATAT 59.577 45.833 0.00 0.00 0.00 0.86
318 319 5.618284 TCTCTTGACCCTGTACCCCTATATA 59.382 44.000 0.00 0.00 0.00 0.86
319 320 6.105139 TCTCTTGACCCTGTACCCCTATATAA 59.895 42.308 0.00 0.00 0.00 0.98
320 321 6.695624 TCTTGACCCTGTACCCCTATATAAA 58.304 40.000 0.00 0.00 0.00 1.40
321 322 6.785963 TCTTGACCCTGTACCCCTATATAAAG 59.214 42.308 0.00 0.00 0.00 1.85
322 323 6.297830 TGACCCTGTACCCCTATATAAAGA 57.702 41.667 0.00 0.00 0.00 2.52
323 324 6.320518 TGACCCTGTACCCCTATATAAAGAG 58.679 44.000 0.00 0.00 0.00 2.85
324 325 6.105139 TGACCCTGTACCCCTATATAAAGAGA 59.895 42.308 0.00 0.00 0.00 3.10
325 326 6.321321 ACCCTGTACCCCTATATAAAGAGAC 58.679 44.000 0.00 0.00 0.00 3.36
326 327 5.418209 CCCTGTACCCCTATATAAAGAGACG 59.582 48.000 0.00 0.00 0.00 4.18
327 328 6.243900 CCTGTACCCCTATATAAAGAGACGA 58.756 44.000 0.00 0.00 0.00 4.20
328 329 6.374894 CCTGTACCCCTATATAAAGAGACGAG 59.625 46.154 0.00 0.00 0.00 4.18
329 330 6.243900 TGTACCCCTATATAAAGAGACGAGG 58.756 44.000 0.00 0.00 0.00 4.63
330 331 5.595814 ACCCCTATATAAAGAGACGAGGA 57.404 43.478 0.00 0.00 0.00 3.71
331 332 5.572252 ACCCCTATATAAAGAGACGAGGAG 58.428 45.833 0.00 0.00 0.00 3.69
332 333 4.399934 CCCCTATATAAAGAGACGAGGAGC 59.600 50.000 0.00 0.00 0.00 4.70
333 334 5.010933 CCCTATATAAAGAGACGAGGAGCA 58.989 45.833 0.00 0.00 0.00 4.26
334 335 5.477291 CCCTATATAAAGAGACGAGGAGCAA 59.523 44.000 0.00 0.00 0.00 3.91
335 336 6.153680 CCCTATATAAAGAGACGAGGAGCAAT 59.846 42.308 0.00 0.00 0.00 3.56
336 337 7.254852 CCTATATAAAGAGACGAGGAGCAATC 58.745 42.308 0.00 0.00 0.00 2.67
337 338 6.656632 ATATAAAGAGACGAGGAGCAATCA 57.343 37.500 0.00 0.00 0.00 2.57
338 339 3.902881 AAAGAGACGAGGAGCAATCAT 57.097 42.857 0.00 0.00 0.00 2.45
339 340 3.902881 AAGAGACGAGGAGCAATCATT 57.097 42.857 0.00 0.00 0.00 2.57
340 341 3.176552 AGAGACGAGGAGCAATCATTG 57.823 47.619 0.00 0.00 0.00 2.82
341 342 2.499289 AGAGACGAGGAGCAATCATTGT 59.501 45.455 0.00 0.00 0.00 2.71
342 343 3.701542 AGAGACGAGGAGCAATCATTGTA 59.298 43.478 0.00 0.00 0.00 2.41
343 344 4.160439 AGAGACGAGGAGCAATCATTGTAA 59.840 41.667 0.00 0.00 0.00 2.41
344 345 4.184629 AGACGAGGAGCAATCATTGTAAC 58.815 43.478 0.00 0.00 0.00 2.50
345 346 3.270877 ACGAGGAGCAATCATTGTAACC 58.729 45.455 0.00 0.85 0.00 2.85
346 347 2.614057 CGAGGAGCAATCATTGTAACCC 59.386 50.000 0.00 0.00 0.00 4.11
347 348 2.952310 GAGGAGCAATCATTGTAACCCC 59.048 50.000 0.00 0.00 0.00 4.95
348 349 2.582636 AGGAGCAATCATTGTAACCCCT 59.417 45.455 0.00 0.00 0.00 4.79
349 350 2.689983 GGAGCAATCATTGTAACCCCTG 59.310 50.000 0.00 0.00 0.00 4.45
350 351 3.620488 GAGCAATCATTGTAACCCCTGA 58.380 45.455 0.00 0.00 0.00 3.86
351 352 4.210331 GAGCAATCATTGTAACCCCTGAT 58.790 43.478 0.00 0.00 0.00 2.90
352 353 4.210331 AGCAATCATTGTAACCCCTGATC 58.790 43.478 0.00 0.00 0.00 2.92
353 354 3.953612 GCAATCATTGTAACCCCTGATCA 59.046 43.478 0.00 0.00 0.00 2.92
354 355 4.586001 GCAATCATTGTAACCCCTGATCAT 59.414 41.667 0.00 0.00 0.00 2.45
355 356 5.069516 GCAATCATTGTAACCCCTGATCATT 59.930 40.000 0.00 0.00 0.00 2.57
356 357 6.736794 GCAATCATTGTAACCCCTGATCATTC 60.737 42.308 0.00 0.00 0.00 2.67
357 358 5.449297 TCATTGTAACCCCTGATCATTCA 57.551 39.130 0.00 0.00 0.00 2.57
358 359 6.017211 TCATTGTAACCCCTGATCATTCAT 57.983 37.500 0.00 0.00 0.00 2.57
359 360 6.434302 TCATTGTAACCCCTGATCATTCATT 58.566 36.000 0.00 0.00 0.00 2.57
360 361 7.581814 TCATTGTAACCCCTGATCATTCATTA 58.418 34.615 0.00 0.00 0.00 1.90
361 362 8.058235 TCATTGTAACCCCTGATCATTCATTAA 58.942 33.333 0.00 0.00 0.00 1.40
362 363 8.863086 CATTGTAACCCCTGATCATTCATTAAT 58.137 33.333 0.00 0.00 0.00 1.40
364 365 9.928618 TTGTAACCCCTGATCATTCATTAATAA 57.071 29.630 0.00 0.00 0.00 1.40
365 366 9.928618 TGTAACCCCTGATCATTCATTAATAAA 57.071 29.630 0.00 0.00 0.00 1.40
367 368 7.530426 ACCCCTGATCATTCATTAATAAAGC 57.470 36.000 0.00 0.00 0.00 3.51
368 369 7.300658 ACCCCTGATCATTCATTAATAAAGCT 58.699 34.615 0.00 0.00 0.00 3.74
369 370 8.448008 ACCCCTGATCATTCATTAATAAAGCTA 58.552 33.333 0.00 0.00 0.00 3.32
370 371 8.954350 CCCCTGATCATTCATTAATAAAGCTAG 58.046 37.037 0.00 0.00 0.00 3.42
371 372 9.512588 CCCTGATCATTCATTAATAAAGCTAGT 57.487 33.333 0.00 0.00 0.00 2.57
377 378 9.988815 TCATTCATTAATAAAGCTAGTCTCCTC 57.011 33.333 0.00 0.00 0.00 3.71
378 379 9.213799 CATTCATTAATAAAGCTAGTCTCCTCC 57.786 37.037 0.00 0.00 0.00 4.30
379 380 7.914427 TCATTAATAAAGCTAGTCTCCTCCA 57.086 36.000 0.00 0.00 0.00 3.86
380 381 8.497910 TCATTAATAAAGCTAGTCTCCTCCAT 57.502 34.615 0.00 0.00 0.00 3.41
381 382 9.601810 TCATTAATAAAGCTAGTCTCCTCCATA 57.398 33.333 0.00 0.00 0.00 2.74
382 383 9.646427 CATTAATAAAGCTAGTCTCCTCCATAC 57.354 37.037 0.00 0.00 0.00 2.39
383 384 9.608718 ATTAATAAAGCTAGTCTCCTCCATACT 57.391 33.333 0.00 0.00 0.00 2.12
384 385 7.922699 AATAAAGCTAGTCTCCTCCATACTT 57.077 36.000 0.00 0.00 0.00 2.24
385 386 5.862678 AAAGCTAGTCTCCTCCATACTTC 57.137 43.478 0.00 0.00 0.00 3.01
386 387 4.806952 AGCTAGTCTCCTCCATACTTCT 57.193 45.455 0.00 0.00 0.00 2.85
387 388 4.725490 AGCTAGTCTCCTCCATACTTCTC 58.275 47.826 0.00 0.00 0.00 2.87
388 389 4.415512 AGCTAGTCTCCTCCATACTTCTCT 59.584 45.833 0.00 0.00 0.00 3.10
389 390 4.518970 GCTAGTCTCCTCCATACTTCTCTG 59.481 50.000 0.00 0.00 0.00 3.35
390 391 4.601406 AGTCTCCTCCATACTTCTCTGT 57.399 45.455 0.00 0.00 0.00 3.41
391 392 4.277476 AGTCTCCTCCATACTTCTCTGTG 58.723 47.826 0.00 0.00 0.00 3.66
392 393 4.020543 GTCTCCTCCATACTTCTCTGTGT 58.979 47.826 0.00 0.00 0.00 3.72
393 394 4.097286 GTCTCCTCCATACTTCTCTGTGTC 59.903 50.000 0.00 0.00 0.00 3.67
394 395 4.019858 CTCCTCCATACTTCTCTGTGTCA 58.980 47.826 0.00 0.00 0.00 3.58
395 396 4.614475 TCCTCCATACTTCTCTGTGTCAT 58.386 43.478 0.00 0.00 0.00 3.06
396 397 5.026121 TCCTCCATACTTCTCTGTGTCATT 58.974 41.667 0.00 0.00 0.00 2.57
397 398 5.485353 TCCTCCATACTTCTCTGTGTCATTT 59.515 40.000 0.00 0.00 0.00 2.32
398 399 6.667848 TCCTCCATACTTCTCTGTGTCATTTA 59.332 38.462 0.00 0.00 0.00 1.40
399 400 6.758886 CCTCCATACTTCTCTGTGTCATTTAC 59.241 42.308 0.00 0.00 0.00 2.01
400 401 7.364232 CCTCCATACTTCTCTGTGTCATTTACT 60.364 40.741 0.00 0.00 0.00 2.24
401 402 7.907389 TCCATACTTCTCTGTGTCATTTACTT 58.093 34.615 0.00 0.00 0.00 2.24
402 403 8.375506 TCCATACTTCTCTGTGTCATTTACTTT 58.624 33.333 0.00 0.00 0.00 2.66
403 404 8.660373 CCATACTTCTCTGTGTCATTTACTTTC 58.340 37.037 0.00 0.00 0.00 2.62
404 405 6.771188 ACTTCTCTGTGTCATTTACTTTCG 57.229 37.500 0.00 0.00 0.00 3.46
405 406 5.177696 ACTTCTCTGTGTCATTTACTTTCGC 59.822 40.000 0.00 0.00 0.00 4.70
406 407 3.673338 TCTCTGTGTCATTTACTTTCGCG 59.327 43.478 0.00 0.00 0.00 5.87
407 408 3.386486 TCTGTGTCATTTACTTTCGCGT 58.614 40.909 5.77 0.00 0.00 6.01
408 409 3.183574 TCTGTGTCATTTACTTTCGCGTG 59.816 43.478 5.77 0.00 0.00 5.34
409 410 2.867368 TGTGTCATTTACTTTCGCGTGT 59.133 40.909 5.77 6.70 0.00 4.49
410 411 3.310227 TGTGTCATTTACTTTCGCGTGTT 59.690 39.130 5.77 0.00 0.00 3.32
411 412 3.898361 GTGTCATTTACTTTCGCGTGTTC 59.102 43.478 5.77 0.00 0.00 3.18
412 413 3.143279 GTCATTTACTTTCGCGTGTTCG 58.857 45.455 5.77 0.00 40.37 3.95
413 414 3.051327 TCATTTACTTTCGCGTGTTCGA 58.949 40.909 5.77 0.00 39.71 3.71
414 415 2.909076 TTTACTTTCGCGTGTTCGAC 57.091 45.000 5.77 0.00 38.30 4.20
415 416 2.124011 TTACTTTCGCGTGTTCGACT 57.876 45.000 5.77 0.00 38.30 4.18
416 417 2.967459 TACTTTCGCGTGTTCGACTA 57.033 45.000 5.77 0.00 38.30 2.59
417 418 1.402511 ACTTTCGCGTGTTCGACTAC 58.597 50.000 5.77 0.00 38.30 2.73
418 419 1.002033 ACTTTCGCGTGTTCGACTACT 60.002 47.619 5.77 0.00 38.30 2.57
419 420 2.049228 CTTTCGCGTGTTCGACTACTT 58.951 47.619 5.77 0.00 38.30 2.24
420 421 1.678360 TTCGCGTGTTCGACTACTTC 58.322 50.000 5.77 0.00 38.30 3.01
421 422 0.587768 TCGCGTGTTCGACTACTTCA 59.412 50.000 5.77 0.00 39.71 3.02
422 423 1.002576 TCGCGTGTTCGACTACTTCAA 60.003 47.619 5.77 0.00 39.71 2.69
423 424 1.121967 CGCGTGTTCGACTACTTCAAC 59.878 52.381 0.00 0.00 39.71 3.18
424 425 2.391879 GCGTGTTCGACTACTTCAACT 58.608 47.619 0.00 0.00 39.71 3.16
425 426 3.558505 GCGTGTTCGACTACTTCAACTA 58.441 45.455 0.00 0.00 39.71 2.24
426 427 3.360168 GCGTGTTCGACTACTTCAACTAC 59.640 47.826 0.00 0.00 39.71 2.73
427 428 3.596982 CGTGTTCGACTACTTCAACTACG 59.403 47.826 0.00 0.00 39.71 3.51
428 429 4.609113 CGTGTTCGACTACTTCAACTACGA 60.609 45.833 0.00 0.00 39.71 3.43
429 430 4.610536 GTGTTCGACTACTTCAACTACGAC 59.389 45.833 0.00 0.00 0.00 4.34
430 431 3.712162 TCGACTACTTCAACTACGACG 57.288 47.619 0.00 0.00 0.00 5.12
431 432 2.159787 TCGACTACTTCAACTACGACGC 60.160 50.000 0.00 0.00 0.00 5.19
432 433 2.159734 CGACTACTTCAACTACGACGCT 60.160 50.000 0.00 0.00 0.00 5.07
433 434 3.415370 GACTACTTCAACTACGACGCTC 58.585 50.000 0.00 0.00 0.00 5.03
434 435 2.159734 ACTACTTCAACTACGACGCTCG 60.160 50.000 0.00 5.97 46.93 5.03
435 436 0.728466 ACTTCAACTACGACGCTCGC 60.728 55.000 0.00 0.00 45.12 5.03
436 437 0.454620 CTTCAACTACGACGCTCGCT 60.455 55.000 0.00 0.00 45.12 4.93
437 438 0.453950 TTCAACTACGACGCTCGCTC 60.454 55.000 0.00 0.00 45.12 5.03
438 439 1.134901 CAACTACGACGCTCGCTCT 59.865 57.895 0.00 0.00 45.12 4.09
439 440 0.858135 CAACTACGACGCTCGCTCTC 60.858 60.000 0.00 0.00 45.12 3.20
440 441 2.053811 CTACGACGCTCGCTCTCG 60.054 66.667 0.00 4.84 45.12 4.04
441 442 4.219846 TACGACGCTCGCTCTCGC 62.220 66.667 0.00 0.00 45.12 5.03
444 445 4.897856 GACGCTCGCTCTCGCTCC 62.898 72.222 0.00 0.00 35.26 4.70
448 449 4.482684 CTCGCTCTCGCTCCGCAA 62.483 66.667 0.00 0.00 35.26 4.85
449 450 3.971453 CTCGCTCTCGCTCCGCAAA 62.971 63.158 0.00 0.00 35.26 3.68
450 451 3.843240 CGCTCTCGCTCCGCAAAC 61.843 66.667 0.00 0.00 0.00 2.93
451 452 2.433318 GCTCTCGCTCCGCAAACT 60.433 61.111 0.00 0.00 0.00 2.66
452 453 2.448705 GCTCTCGCTCCGCAAACTC 61.449 63.158 0.00 0.00 0.00 3.01
453 454 1.080501 CTCTCGCTCCGCAAACTCA 60.081 57.895 0.00 0.00 0.00 3.41
454 455 1.075425 CTCTCGCTCCGCAAACTCAG 61.075 60.000 0.00 0.00 0.00 3.35
455 456 1.080501 CTCGCTCCGCAAACTCAGA 60.081 57.895 0.00 0.00 0.00 3.27
456 457 1.347817 CTCGCTCCGCAAACTCAGAC 61.348 60.000 0.00 0.00 0.00 3.51
457 458 2.383527 CGCTCCGCAAACTCAGACC 61.384 63.158 0.00 0.00 0.00 3.85
458 459 2.383527 GCTCCGCAAACTCAGACCG 61.384 63.158 0.00 0.00 0.00 4.79
459 460 1.738099 CTCCGCAAACTCAGACCGG 60.738 63.158 0.00 0.00 40.25 5.28
460 461 2.154798 CTCCGCAAACTCAGACCGGA 62.155 60.000 9.46 0.00 44.85 5.14
461 462 2.027625 CCGCAAACTCAGACCGGAC 61.028 63.158 9.46 0.10 41.34 4.79
462 463 1.006102 CGCAAACTCAGACCGGACT 60.006 57.895 9.46 3.68 0.00 3.85
463 464 1.009389 CGCAAACTCAGACCGGACTC 61.009 60.000 9.46 0.00 0.00 3.36
464 465 1.009389 GCAAACTCAGACCGGACTCG 61.009 60.000 9.46 3.01 0.00 4.18
465 466 1.009389 CAAACTCAGACCGGACTCGC 61.009 60.000 9.46 0.00 34.56 5.03
466 467 2.156051 AAACTCAGACCGGACTCGCC 62.156 60.000 9.46 0.00 34.56 5.54
525 526 2.264794 CTCCACGTGCACCCTACC 59.735 66.667 10.91 0.00 0.00 3.18
803 812 1.136565 CGCCGCCATTAACCAACTG 59.863 57.895 0.00 0.00 0.00 3.16
808 818 0.451783 GCCATTAACCAACTGCCTCG 59.548 55.000 0.00 0.00 0.00 4.63
1343 1353 9.751542 CTTCTCTTTTCTGACTACTAAAGTTCA 57.248 33.333 0.00 0.00 39.07 3.18
1434 1445 7.067251 TCGGTACAAACTTAGTCAATGGTTTTT 59.933 33.333 0.00 0.00 30.78 1.94
1436 1447 7.436970 GGTACAAACTTAGTCAATGGTTTTTGG 59.563 37.037 0.00 0.00 30.78 3.28
1439 1450 7.880713 ACAAACTTAGTCAATGGTTTTTGGTTT 59.119 29.630 0.00 0.00 30.78 3.27
1440 1451 7.841915 AACTTAGTCAATGGTTTTTGGTTTG 57.158 32.000 0.00 0.00 0.00 2.93
1441 1452 6.941857 ACTTAGTCAATGGTTTTTGGTTTGT 58.058 32.000 0.00 0.00 0.00 2.83
1464 1475 3.061563 CGGAGCATTTCGTGTTAATTCGA 59.938 43.478 1.81 1.81 0.00 3.71
2386 2397 6.212791 ACCATGCTACTGTTTTCTAGGAGTAA 59.787 38.462 0.00 0.00 0.00 2.24
2388 2399 7.770897 CCATGCTACTGTTTTCTAGGAGTAATT 59.229 37.037 0.00 0.00 0.00 1.40
2392 2403 8.251721 GCTACTGTTTTCTAGGAGTAATTCAGA 58.748 37.037 0.00 0.00 0.00 3.27
2553 2567 1.995484 CGGACTGTACAAGCATGTCAG 59.005 52.381 15.33 15.33 41.05 3.51
2580 2594 6.366061 GTCGTGCACTATAATTATCATGCAGA 59.634 38.462 25.69 21.88 43.24 4.26
2594 2608 9.895138 ATTATCATGCAGAGCACATAATATGTA 57.105 29.630 5.49 0.00 43.04 2.29
2635 2653 6.385467 AGGCTTGTATTCCTTCTAGATGAACT 59.615 38.462 7.19 1.63 0.00 3.01
2636 2654 7.565398 AGGCTTGTATTCCTTCTAGATGAACTA 59.435 37.037 7.19 0.88 0.00 2.24
2637 2655 8.204836 GGCTTGTATTCCTTCTAGATGAACTAA 58.795 37.037 7.19 3.63 0.00 2.24
2638 2656 9.036671 GCTTGTATTCCTTCTAGATGAACTAAC 57.963 37.037 7.19 7.16 0.00 2.34
2779 2798 8.708378 TGTTATGGAGAATGTGATCTACTGATT 58.292 33.333 0.00 0.00 31.08 2.57
2908 2927 6.391227 AAACAAGTGTTACAGATTCCAAGG 57.609 37.500 0.00 0.00 37.25 3.61
2963 2982 5.197451 TCTTTTGTTAGAGTCCTTGCCAAA 58.803 37.500 0.00 0.00 0.00 3.28
3505 3559 2.338785 GCAAAGCACTCCTGGGCTC 61.339 63.158 0.00 0.00 40.01 4.70
3687 3867 0.813610 CAACTTGTGTGAGGCGGTGA 60.814 55.000 0.00 0.00 0.00 4.02
3700 3880 1.538419 GGCGGTGAGTAACTAGATGCC 60.538 57.143 0.00 0.00 0.00 4.40
3835 4015 6.757947 CACTTGAAATTCAACTCCACAAATGT 59.242 34.615 4.03 0.00 32.21 2.71
3888 4068 2.238646 TCCCAAGCGGTGTATTGAGAAT 59.761 45.455 0.00 0.00 0.00 2.40
3891 4071 5.305902 TCCCAAGCGGTGTATTGAGAATATA 59.694 40.000 0.00 0.00 0.00 0.86
4023 4284 4.801330 TCAACTTTCTATCGCTGGAGAA 57.199 40.909 0.00 0.00 0.00 2.87
4039 4300 3.830755 TGGAGAACCAAGTAGTCCAGTAC 59.169 47.826 0.00 0.00 43.91 2.73
4168 4491 1.600023 TCAAGGTTTACGCCCAACAG 58.400 50.000 0.00 0.00 0.00 3.16
4392 4715 2.416202 GCATTTGGCTGGCATTTTACAC 59.584 45.455 4.22 0.00 40.25 2.90
4514 4847 7.492020 TGCTGATTGGAAATATTTATGCACAAC 59.508 33.333 0.00 0.00 0.00 3.32
4550 4884 2.742053 ACGATGTTGTTGATGGCACTAC 59.258 45.455 0.00 0.00 0.00 2.73
4551 4885 2.222796 CGATGTTGTTGATGGCACTACG 60.223 50.000 0.00 0.00 0.00 3.51
4576 4910 5.546621 TGGTATGCTGTATACTCTTTCCC 57.453 43.478 14.20 0.00 41.19 3.97
5156 5515 8.531622 TTTGGAATAGTTTATGTGCACAAATG 57.468 30.769 25.72 0.00 0.00 2.32
5257 5622 2.132762 CCTTCACGTGTACCTGTTGTC 58.867 52.381 16.51 0.00 0.00 3.18
5434 5799 5.969435 CGTATTACGAGCTGTCATCTTTGTA 59.031 40.000 10.70 0.00 46.05 2.41
5823 6193 7.014518 TGTCAAATTCCAGTGAATCAATCAAGT 59.985 33.333 0.00 0.00 40.34 3.16
5859 6229 7.885399 GGTGAATAACTATATTTCTGCATCCCT 59.115 37.037 0.00 0.00 31.83 4.20
6100 6470 4.517285 TGCTTCATTCTGGAATGTACTCC 58.483 43.478 18.86 0.00 46.15 3.85
6264 6634 7.861630 TCTCCTTTTGAACGACTTCAATTTAG 58.138 34.615 2.44 2.09 44.24 1.85
6588 6959 2.020720 CTGGAGACTGACATCTACGCT 58.979 52.381 0.00 0.00 31.39 5.07
6689 7071 2.637872 TGTTCCAAACCAAACCAAACCA 59.362 40.909 0.00 0.00 0.00 3.67
6690 7072 3.072476 TGTTCCAAACCAAACCAAACCAA 59.928 39.130 0.00 0.00 0.00 3.67
6691 7073 4.072839 GTTCCAAACCAAACCAAACCAAA 58.927 39.130 0.00 0.00 0.00 3.28
6692 7074 3.676093 TCCAAACCAAACCAAACCAAAC 58.324 40.909 0.00 0.00 0.00 2.93
6693 7075 2.750166 CCAAACCAAACCAAACCAAACC 59.250 45.455 0.00 0.00 0.00 3.27
7015 7397 5.835280 TCACTACATCAGGCAGAGATCATTA 59.165 40.000 0.00 0.00 0.00 1.90
7018 7400 5.163281 ACATCAGGCAGAGATCATTATCC 57.837 43.478 0.00 0.00 31.98 2.59
7103 7485 5.126067 AGAGTGTGCAGTCAAACTTGTATT 58.874 37.500 9.38 0.00 40.77 1.89
7128 7510 7.289587 ACTTTGACTTTTGTTGTACAAATGC 57.710 32.000 10.51 0.00 46.17 3.56
7206 7643 9.018582 AGAGGGAGTATTTCTTTTTCATCTTTG 57.981 33.333 0.00 0.00 0.00 2.77
7243 7972 2.930826 AAGAGTGTTGGTGTCCGAAT 57.069 45.000 0.00 0.00 0.00 3.34
7248 7977 2.616842 AGTGTTGGTGTCCGAATGTTTC 59.383 45.455 0.00 0.00 0.00 2.78
7254 7983 1.459592 GTGTCCGAATGTTTCAGGTCG 59.540 52.381 0.00 0.00 0.00 4.79
7318 8047 8.697507 AAGAAAACTACAGAAAATGAGATGGT 57.302 30.769 0.00 0.00 0.00 3.55
7326 8055 6.049149 ACAGAAAATGAGATGGTACGTATGG 58.951 40.000 0.00 0.00 0.00 2.74
7439 8183 7.313731 AGGTTTCTATCCCACATAGGAATAGA 58.686 38.462 0.00 0.00 40.04 1.98
7440 8184 7.794683 AGGTTTCTATCCCACATAGGAATAGAA 59.205 37.037 0.00 0.00 40.04 2.10
7441 8185 8.606830 GGTTTCTATCCCACATAGGAATAGAAT 58.393 37.037 4.06 0.00 40.04 2.40
7442 8186 9.442047 GTTTCTATCCCACATAGGAATAGAATG 57.558 37.037 4.06 0.00 40.04 2.67
7443 8187 8.972662 TTCTATCCCACATAGGAATAGAATGA 57.027 34.615 0.00 0.00 40.04 2.57
7444 8188 9.566331 TTCTATCCCACATAGGAATAGAATGAT 57.434 33.333 0.00 0.00 40.04 2.45
7447 8191 7.739995 TCCCACATAGGAATAGAATGATAGG 57.260 40.000 0.00 0.00 41.22 2.57
7448 8192 7.256399 TCCCACATAGGAATAGAATGATAGGT 58.744 38.462 0.00 0.00 41.22 3.08
7449 8193 7.739444 TCCCACATAGGAATAGAATGATAGGTT 59.261 37.037 0.00 0.00 41.22 3.50
7450 8194 8.386264 CCCACATAGGAATAGAATGATAGGTTT 58.614 37.037 0.00 0.00 41.22 3.27
7451 8195 9.442047 CCACATAGGAATAGAATGATAGGTTTC 57.558 37.037 0.00 0.00 41.22 2.78
7470 8214 6.502158 AGGTTTCTATCCCACATAGGAATAGG 59.498 42.308 0.00 0.00 40.04 2.57
7475 8219 7.723382 TCTATCCCACATAGGAATAGGAATCT 58.277 38.462 0.00 0.00 40.04 2.40
7479 8223 8.757307 TCCCACATAGGAATAGGAATCTATTT 57.243 34.615 0.00 0.00 43.91 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.473444 ACAATCCACTCAACCATCAAGTT 58.527 39.130 0.00 0.00 0.00 2.66
3 4 4.104383 ACAATCCACTCAACCATCAAGT 57.896 40.909 0.00 0.00 0.00 3.16
4 5 5.248640 AGTACAATCCACTCAACCATCAAG 58.751 41.667 0.00 0.00 0.00 3.02
5 6 5.013079 AGAGTACAATCCACTCAACCATCAA 59.987 40.000 5.38 0.00 44.03 2.57
6 7 4.532126 AGAGTACAATCCACTCAACCATCA 59.468 41.667 5.38 0.00 44.03 3.07
7 8 5.091261 AGAGTACAATCCACTCAACCATC 57.909 43.478 5.38 0.00 44.03 3.51
8 9 5.505181 AAGAGTACAATCCACTCAACCAT 57.495 39.130 5.38 0.00 44.03 3.55
10 11 6.294010 GGAAAAAGAGTACAATCCACTCAACC 60.294 42.308 5.38 0.00 44.03 3.77
11 12 6.294010 GGGAAAAAGAGTACAATCCACTCAAC 60.294 42.308 5.38 0.00 44.03 3.18
12 13 5.768164 GGGAAAAAGAGTACAATCCACTCAA 59.232 40.000 5.38 0.00 44.03 3.02
13 14 5.073144 AGGGAAAAAGAGTACAATCCACTCA 59.927 40.000 5.38 0.00 44.03 3.41
15 16 5.584551 AGGGAAAAAGAGTACAATCCACT 57.415 39.130 0.00 0.00 0.00 4.00
16 17 5.768164 TCAAGGGAAAAAGAGTACAATCCAC 59.232 40.000 0.00 0.00 0.00 4.02
17 18 5.947663 TCAAGGGAAAAAGAGTACAATCCA 58.052 37.500 0.00 0.00 0.00 3.41
18 19 6.004574 ACTCAAGGGAAAAAGAGTACAATCC 58.995 40.000 0.00 0.00 39.40 3.01
19 20 6.710744 TCACTCAAGGGAAAAAGAGTACAATC 59.289 38.462 0.00 0.00 39.17 2.67
20 21 6.601332 TCACTCAAGGGAAAAAGAGTACAAT 58.399 36.000 0.00 0.00 39.17 2.71
21 22 5.996644 TCACTCAAGGGAAAAAGAGTACAA 58.003 37.500 0.00 0.00 39.17 2.41
22 23 5.130477 ACTCACTCAAGGGAAAAAGAGTACA 59.870 40.000 0.00 0.00 39.17 2.90
23 24 5.612351 ACTCACTCAAGGGAAAAAGAGTAC 58.388 41.667 0.00 0.00 39.17 2.73
24 25 5.888982 ACTCACTCAAGGGAAAAAGAGTA 57.111 39.130 0.00 0.00 39.17 2.59
25 26 4.779993 ACTCACTCAAGGGAAAAAGAGT 57.220 40.909 0.00 0.00 41.70 3.24
26 27 6.456795 AAAACTCACTCAAGGGAAAAAGAG 57.543 37.500 0.00 0.00 0.00 2.85
27 28 5.359860 GGAAAACTCACTCAAGGGAAAAAGA 59.640 40.000 0.00 0.00 0.00 2.52
28 29 5.360999 AGGAAAACTCACTCAAGGGAAAAAG 59.639 40.000 0.00 0.00 0.00 2.27
29 30 5.127031 CAGGAAAACTCACTCAAGGGAAAAA 59.873 40.000 0.00 0.00 0.00 1.94
30 31 4.644685 CAGGAAAACTCACTCAAGGGAAAA 59.355 41.667 0.00 0.00 0.00 2.29
31 32 4.080015 TCAGGAAAACTCACTCAAGGGAAA 60.080 41.667 0.00 0.00 0.00 3.13
32 33 3.458118 TCAGGAAAACTCACTCAAGGGAA 59.542 43.478 0.00 0.00 0.00 3.97
33 34 3.045634 TCAGGAAAACTCACTCAAGGGA 58.954 45.455 0.00 0.00 0.00 4.20
34 35 3.492102 TCAGGAAAACTCACTCAAGGG 57.508 47.619 0.00 0.00 0.00 3.95
35 36 4.392940 ACATCAGGAAAACTCACTCAAGG 58.607 43.478 0.00 0.00 0.00 3.61
36 37 6.261826 AGAAACATCAGGAAAACTCACTCAAG 59.738 38.462 0.00 0.00 0.00 3.02
37 38 6.122277 AGAAACATCAGGAAAACTCACTCAA 58.878 36.000 0.00 0.00 0.00 3.02
38 39 5.684704 AGAAACATCAGGAAAACTCACTCA 58.315 37.500 0.00 0.00 0.00 3.41
39 40 5.760253 TGAGAAACATCAGGAAAACTCACTC 59.240 40.000 0.00 0.00 0.00 3.51
40 41 5.529060 GTGAGAAACATCAGGAAAACTCACT 59.471 40.000 1.10 0.00 44.99 3.41
41 42 5.752712 GTGAGAAACATCAGGAAAACTCAC 58.247 41.667 0.00 0.00 43.32 3.51
42 43 5.296780 GTGTGAGAAACATCAGGAAAACTCA 59.703 40.000 0.00 0.00 41.97 3.41
43 44 5.559035 CGTGTGAGAAACATCAGGAAAACTC 60.559 44.000 0.00 0.00 41.97 3.01
44 45 4.273480 CGTGTGAGAAACATCAGGAAAACT 59.727 41.667 0.00 0.00 41.97 2.66
45 46 4.272504 TCGTGTGAGAAACATCAGGAAAAC 59.727 41.667 0.00 0.00 41.97 2.43
46 47 4.447290 TCGTGTGAGAAACATCAGGAAAA 58.553 39.130 0.00 0.00 41.97 2.29
47 48 4.058124 CTCGTGTGAGAAACATCAGGAAA 58.942 43.478 0.00 0.00 45.57 3.13
48 49 3.554960 CCTCGTGTGAGAAACATCAGGAA 60.555 47.826 0.00 0.00 45.57 3.36
49 50 2.029020 CCTCGTGTGAGAAACATCAGGA 60.029 50.000 0.00 0.00 45.57 3.86
50 51 2.289072 ACCTCGTGTGAGAAACATCAGG 60.289 50.000 0.00 4.82 45.57 3.86
51 52 3.032017 ACCTCGTGTGAGAAACATCAG 57.968 47.619 0.00 0.00 45.57 2.90
52 53 3.469008 AACCTCGTGTGAGAAACATCA 57.531 42.857 0.00 0.00 45.57 3.07
53 54 4.813296 AAAACCTCGTGTGAGAAACATC 57.187 40.909 0.00 0.00 45.57 3.06
54 55 4.638421 TCAAAAACCTCGTGTGAGAAACAT 59.362 37.500 0.00 0.00 45.57 2.71
55 56 4.004314 TCAAAAACCTCGTGTGAGAAACA 58.996 39.130 0.00 0.00 45.57 2.83
56 57 4.340263 GTCAAAAACCTCGTGTGAGAAAC 58.660 43.478 0.00 0.00 45.57 2.78
57 58 3.062909 CGTCAAAAACCTCGTGTGAGAAA 59.937 43.478 0.00 0.00 45.57 2.52
58 59 2.605818 CGTCAAAAACCTCGTGTGAGAA 59.394 45.455 0.00 0.00 45.57 2.87
59 60 2.159212 TCGTCAAAAACCTCGTGTGAGA 60.159 45.455 0.00 0.00 45.57 3.27
60 61 2.198406 TCGTCAAAAACCTCGTGTGAG 58.802 47.619 0.00 0.00 42.18 3.51
61 62 2.198406 CTCGTCAAAAACCTCGTGTGA 58.802 47.619 0.00 0.00 0.00 3.58
62 63 1.260561 CCTCGTCAAAAACCTCGTGTG 59.739 52.381 0.00 0.00 0.00 3.82
63 64 1.578583 CCTCGTCAAAAACCTCGTGT 58.421 50.000 0.00 0.00 0.00 4.49
64 65 0.234884 GCCTCGTCAAAAACCTCGTG 59.765 55.000 0.00 0.00 0.00 4.35
65 66 0.179067 TGCCTCGTCAAAAACCTCGT 60.179 50.000 0.00 0.00 0.00 4.18
66 67 0.941542 TTGCCTCGTCAAAAACCTCG 59.058 50.000 0.00 0.00 0.00 4.63
67 68 3.565516 GAATTGCCTCGTCAAAAACCTC 58.434 45.455 0.00 0.00 0.00 3.85
68 69 2.031157 CGAATTGCCTCGTCAAAAACCT 60.031 45.455 0.00 0.00 34.08 3.50
69 70 2.315901 CGAATTGCCTCGTCAAAAACC 58.684 47.619 0.00 0.00 34.08 3.27
80 81 8.670922 ACATTGTTGTATTGCACGAATTGCCT 62.671 38.462 0.00 0.00 42.02 4.75
81 82 6.580569 ACATTGTTGTATTGCACGAATTGCC 61.581 40.000 0.00 0.00 42.02 4.52
82 83 4.385447 ACATTGTTGTATTGCACGAATTGC 59.615 37.500 0.00 0.00 42.64 3.56
83 84 7.739022 ATACATTGTTGTATTGCACGAATTG 57.261 32.000 0.00 0.00 44.83 2.32
84 85 8.673711 AGTATACATTGTTGTATTGCACGAATT 58.326 29.630 5.50 0.00 44.83 2.17
85 86 8.122330 CAGTATACATTGTTGTATTGCACGAAT 58.878 33.333 5.50 0.00 44.83 3.34
86 87 7.118535 ACAGTATACATTGTTGTATTGCACGAA 59.881 33.333 5.50 0.00 44.83 3.85
87 88 6.592220 ACAGTATACATTGTTGTATTGCACGA 59.408 34.615 5.50 0.00 44.83 4.35
88 89 6.682441 CACAGTATACATTGTTGTATTGCACG 59.318 38.462 5.50 0.00 44.83 5.34
89 90 7.481483 CACACAGTATACATTGTTGTATTGCAC 59.519 37.037 5.50 0.00 44.83 4.57
90 91 7.525759 CACACAGTATACATTGTTGTATTGCA 58.474 34.615 5.50 0.00 44.83 4.08
91 92 6.468956 GCACACAGTATACATTGTTGTATTGC 59.531 38.462 5.50 8.44 44.83 3.56
92 93 7.751732 AGCACACAGTATACATTGTTGTATTG 58.248 34.615 5.50 2.93 44.83 1.90
93 94 7.824289 AGAGCACACAGTATACATTGTTGTATT 59.176 33.333 5.50 0.00 44.83 1.89
95 96 6.697395 AGAGCACACAGTATACATTGTTGTA 58.303 36.000 5.50 0.00 42.35 2.41
96 97 5.551233 AGAGCACACAGTATACATTGTTGT 58.449 37.500 5.50 0.00 39.98 3.32
97 98 6.486253 AAGAGCACACAGTATACATTGTTG 57.514 37.500 5.50 4.85 0.00 3.33
98 99 6.936900 AGAAAGAGCACACAGTATACATTGTT 59.063 34.615 5.50 0.00 0.00 2.83
99 100 6.467677 AGAAAGAGCACACAGTATACATTGT 58.532 36.000 5.50 4.66 0.00 2.71
100 101 6.036517 GGAGAAAGAGCACACAGTATACATTG 59.963 42.308 5.50 4.01 0.00 2.82
101 102 6.109359 GGAGAAAGAGCACACAGTATACATT 58.891 40.000 5.50 0.00 0.00 2.71
102 103 5.187772 TGGAGAAAGAGCACACAGTATACAT 59.812 40.000 5.50 0.00 0.00 2.29
103 104 4.526650 TGGAGAAAGAGCACACAGTATACA 59.473 41.667 5.50 0.00 0.00 2.29
104 105 5.073311 TGGAGAAAGAGCACACAGTATAC 57.927 43.478 0.00 0.00 0.00 1.47
105 106 5.939764 ATGGAGAAAGAGCACACAGTATA 57.060 39.130 0.00 0.00 0.00 1.47
106 107 4.833478 ATGGAGAAAGAGCACACAGTAT 57.167 40.909 0.00 0.00 0.00 2.12
107 108 5.939764 ATATGGAGAAAGAGCACACAGTA 57.060 39.130 0.00 0.00 0.00 2.74
108 109 4.833478 ATATGGAGAAAGAGCACACAGT 57.167 40.909 0.00 0.00 0.00 3.55
109 110 6.506500 AAAATATGGAGAAAGAGCACACAG 57.493 37.500 0.00 0.00 0.00 3.66
110 111 6.899393 AAAAATATGGAGAAAGAGCACACA 57.101 33.333 0.00 0.00 0.00 3.72
131 132 3.097614 TCCGAAAAACCCAGTGGAAAAA 58.902 40.909 11.95 0.00 34.81 1.94
132 133 2.691011 CTCCGAAAAACCCAGTGGAAAA 59.309 45.455 11.95 0.00 34.81 2.29
133 134 2.303175 CTCCGAAAAACCCAGTGGAAA 58.697 47.619 11.95 0.00 34.81 3.13
134 135 1.213430 ACTCCGAAAAACCCAGTGGAA 59.787 47.619 11.95 0.00 34.81 3.53
135 136 0.841289 ACTCCGAAAAACCCAGTGGA 59.159 50.000 11.95 0.00 34.81 4.02
136 137 1.687563 AACTCCGAAAAACCCAGTGG 58.312 50.000 0.63 0.63 37.80 4.00
137 138 3.129638 TCAAAACTCCGAAAAACCCAGTG 59.870 43.478 0.00 0.00 0.00 3.66
138 139 3.358118 TCAAAACTCCGAAAAACCCAGT 58.642 40.909 0.00 0.00 0.00 4.00
139 140 3.243401 CCTCAAAACTCCGAAAAACCCAG 60.243 47.826 0.00 0.00 0.00 4.45
140 141 2.691011 CCTCAAAACTCCGAAAAACCCA 59.309 45.455 0.00 0.00 0.00 4.51
141 142 2.545113 GCCTCAAAACTCCGAAAAACCC 60.545 50.000 0.00 0.00 0.00 4.11
142 143 2.100087 TGCCTCAAAACTCCGAAAAACC 59.900 45.455 0.00 0.00 0.00 3.27
143 144 3.430333 TGCCTCAAAACTCCGAAAAAC 57.570 42.857 0.00 0.00 0.00 2.43
144 145 3.243704 CCATGCCTCAAAACTCCGAAAAA 60.244 43.478 0.00 0.00 0.00 1.94
145 146 2.295909 CCATGCCTCAAAACTCCGAAAA 59.704 45.455 0.00 0.00 0.00 2.29
146 147 1.885887 CCATGCCTCAAAACTCCGAAA 59.114 47.619 0.00 0.00 0.00 3.46
147 148 1.073125 TCCATGCCTCAAAACTCCGAA 59.927 47.619 0.00 0.00 0.00 4.30
148 149 0.690192 TCCATGCCTCAAAACTCCGA 59.310 50.000 0.00 0.00 0.00 4.55
149 150 1.755179 ATCCATGCCTCAAAACTCCG 58.245 50.000 0.00 0.00 0.00 4.63
150 151 4.452455 CGTATATCCATGCCTCAAAACTCC 59.548 45.833 0.00 0.00 0.00 3.85
151 152 4.452455 CCGTATATCCATGCCTCAAAACTC 59.548 45.833 0.00 0.00 0.00 3.01
152 153 4.102524 TCCGTATATCCATGCCTCAAAACT 59.897 41.667 0.00 0.00 0.00 2.66
153 154 4.385825 TCCGTATATCCATGCCTCAAAAC 58.614 43.478 0.00 0.00 0.00 2.43
154 155 4.698201 TCCGTATATCCATGCCTCAAAA 57.302 40.909 0.00 0.00 0.00 2.44
155 156 4.908601 ATCCGTATATCCATGCCTCAAA 57.091 40.909 0.00 0.00 0.00 2.69
156 157 6.560003 ATTATCCGTATATCCATGCCTCAA 57.440 37.500 0.00 0.00 0.00 3.02
157 158 6.560003 AATTATCCGTATATCCATGCCTCA 57.440 37.500 0.00 0.00 0.00 3.86
158 159 6.929606 GGTAATTATCCGTATATCCATGCCTC 59.070 42.308 0.00 0.00 0.00 4.70
159 160 6.183361 GGGTAATTATCCGTATATCCATGCCT 60.183 42.308 0.00 0.00 0.00 4.75
160 161 5.995897 GGGTAATTATCCGTATATCCATGCC 59.004 44.000 0.00 0.00 0.00 4.40
161 162 6.588204 TGGGTAATTATCCGTATATCCATGC 58.412 40.000 10.23 0.00 0.00 4.06
162 163 7.715249 CCTTGGGTAATTATCCGTATATCCATG 59.285 40.741 10.23 0.00 0.00 3.66
163 164 7.147373 CCCTTGGGTAATTATCCGTATATCCAT 60.147 40.741 10.23 0.00 0.00 3.41
164 165 6.157297 CCCTTGGGTAATTATCCGTATATCCA 59.843 42.308 10.23 0.00 0.00 3.41
165 166 6.408891 CCCCTTGGGTAATTATCCGTATATCC 60.409 46.154 10.23 0.00 38.25 2.59
166 167 6.589135 CCCCTTGGGTAATTATCCGTATATC 58.411 44.000 10.23 0.00 38.25 1.63
167 168 6.570654 CCCCTTGGGTAATTATCCGTATAT 57.429 41.667 10.23 0.00 38.25 0.86
169 170 4.921644 CCCCTTGGGTAATTATCCGTAT 57.078 45.455 10.23 0.00 38.25 3.06
183 184 1.725169 TTCCCAACACTCCCCCTTGG 61.725 60.000 0.00 0.00 35.18 3.61
184 185 0.187361 TTTCCCAACACTCCCCCTTG 59.813 55.000 0.00 0.00 0.00 3.61
185 186 0.187606 GTTTCCCAACACTCCCCCTT 59.812 55.000 0.00 0.00 32.54 3.95
186 187 1.726192 GGTTTCCCAACACTCCCCCT 61.726 60.000 0.00 0.00 34.15 4.79
187 188 1.228769 GGTTTCCCAACACTCCCCC 60.229 63.158 0.00 0.00 34.15 5.40
188 189 1.602605 CGGTTTCCCAACACTCCCC 60.603 63.158 0.00 0.00 34.15 4.81
189 190 1.602605 CCGGTTTCCCAACACTCCC 60.603 63.158 0.00 0.00 34.15 4.30
190 191 2.265904 GCCGGTTTCCCAACACTCC 61.266 63.158 1.90 0.00 34.15 3.85
191 192 2.265904 GGCCGGTTTCCCAACACTC 61.266 63.158 1.90 0.00 34.15 3.51
192 193 2.203437 GGCCGGTTTCCCAACACT 60.203 61.111 1.90 0.00 34.15 3.55
193 194 3.299977 GGGCCGGTTTCCCAACAC 61.300 66.667 10.56 0.00 43.37 3.32
200 201 4.629523 TCGTGGTGGGCCGGTTTC 62.630 66.667 1.90 0.00 37.67 2.78
201 202 4.636435 CTCGTGGTGGGCCGGTTT 62.636 66.667 1.90 0.00 37.67 3.27
235 236 0.590195 CTATCCCAAGCGCTTCATGC 59.410 55.000 22.21 0.00 38.57 4.06
236 237 0.590195 GCTATCCCAAGCGCTTCATG 59.410 55.000 22.21 10.52 31.76 3.07
237 238 0.536006 GGCTATCCCAAGCGCTTCAT 60.536 55.000 22.21 14.71 43.74 2.57
238 239 1.153168 GGCTATCCCAAGCGCTTCA 60.153 57.895 22.21 7.62 43.74 3.02
239 240 3.737824 GGCTATCCCAAGCGCTTC 58.262 61.111 22.21 6.97 43.74 3.86
258 259 1.804601 GTAAAGTGTGGAACCGGGAG 58.195 55.000 6.32 0.00 34.36 4.30
259 260 0.033781 CGTAAAGTGTGGAACCGGGA 59.966 55.000 6.32 0.00 34.36 5.14
260 261 0.249996 ACGTAAAGTGTGGAACCGGG 60.250 55.000 6.32 0.00 34.36 5.73
261 262 1.585297 AACGTAAAGTGTGGAACCGG 58.415 50.000 0.00 0.00 34.36 5.28
262 263 4.792528 TTTAACGTAAAGTGTGGAACCG 57.207 40.909 0.00 0.00 34.36 4.44
263 264 5.454520 CCATTTAACGTAAAGTGTGGAACC 58.545 41.667 0.00 0.00 34.36 3.62
264 265 5.008911 ACCCATTTAACGTAAAGTGTGGAAC 59.991 40.000 0.00 0.00 37.35 3.62
265 266 5.131784 ACCCATTTAACGTAAAGTGTGGAA 58.868 37.500 0.00 0.00 0.00 3.53
266 267 4.716794 ACCCATTTAACGTAAAGTGTGGA 58.283 39.130 0.00 0.00 0.00 4.02
267 268 5.702209 AGTACCCATTTAACGTAAAGTGTGG 59.298 40.000 0.00 0.00 0.00 4.17
268 269 6.790285 AGTACCCATTTAACGTAAAGTGTG 57.210 37.500 0.00 0.00 0.00 3.82
269 270 9.154847 GATAAGTACCCATTTAACGTAAAGTGT 57.845 33.333 0.00 0.00 0.00 3.55
270 271 9.374838 AGATAAGTACCCATTTAACGTAAAGTG 57.625 33.333 0.00 0.00 0.00 3.16
271 272 9.591792 GAGATAAGTACCCATTTAACGTAAAGT 57.408 33.333 0.00 0.00 0.00 2.66
272 273 9.813446 AGAGATAAGTACCCATTTAACGTAAAG 57.187 33.333 0.00 0.00 0.00 1.85
274 275 9.590451 CAAGAGATAAGTACCCATTTAACGTAA 57.410 33.333 0.00 0.00 0.00 3.18
275 276 8.970020 TCAAGAGATAAGTACCCATTTAACGTA 58.030 33.333 0.00 0.00 0.00 3.57
276 277 7.763071 GTCAAGAGATAAGTACCCATTTAACGT 59.237 37.037 0.00 0.00 0.00 3.99
277 278 7.224167 GGTCAAGAGATAAGTACCCATTTAACG 59.776 40.741 0.00 0.00 0.00 3.18
278 279 7.498239 GGGTCAAGAGATAAGTACCCATTTAAC 59.502 40.741 0.00 0.00 44.94 2.01
279 280 7.571025 GGGTCAAGAGATAAGTACCCATTTAA 58.429 38.462 0.00 0.00 44.94 1.52
280 281 7.133133 GGGTCAAGAGATAAGTACCCATTTA 57.867 40.000 0.00 0.00 44.94 1.40
281 282 6.002653 GGGTCAAGAGATAAGTACCCATTT 57.997 41.667 0.00 0.00 44.94 2.32
282 283 5.632034 GGGTCAAGAGATAAGTACCCATT 57.368 43.478 0.00 0.00 44.94 3.16
285 286 4.031611 ACAGGGTCAAGAGATAAGTACCC 58.968 47.826 0.00 0.00 45.76 3.69
286 287 5.068855 GGTACAGGGTCAAGAGATAAGTACC 59.931 48.000 0.00 0.00 41.23 3.34
287 288 5.068855 GGGTACAGGGTCAAGAGATAAGTAC 59.931 48.000 0.00 0.00 0.00 2.73
288 289 5.206587 GGGTACAGGGTCAAGAGATAAGTA 58.793 45.833 0.00 0.00 0.00 2.24
289 290 4.031611 GGGTACAGGGTCAAGAGATAAGT 58.968 47.826 0.00 0.00 0.00 2.24
290 291 3.388350 GGGGTACAGGGTCAAGAGATAAG 59.612 52.174 0.00 0.00 0.00 1.73
291 292 3.013648 AGGGGTACAGGGTCAAGAGATAA 59.986 47.826 0.00 0.00 0.00 1.75
292 293 2.590611 AGGGGTACAGGGTCAAGAGATA 59.409 50.000 0.00 0.00 0.00 1.98
293 294 1.366435 AGGGGTACAGGGTCAAGAGAT 59.634 52.381 0.00 0.00 0.00 2.75
294 295 0.790993 AGGGGTACAGGGTCAAGAGA 59.209 55.000 0.00 0.00 0.00 3.10
295 296 2.544844 TAGGGGTACAGGGTCAAGAG 57.455 55.000 0.00 0.00 0.00 2.85
296 297 4.845530 ATATAGGGGTACAGGGTCAAGA 57.154 45.455 0.00 0.00 0.00 3.02
297 298 6.785963 TCTTTATATAGGGGTACAGGGTCAAG 59.214 42.308 0.00 0.00 0.00 3.02
298 299 6.695624 TCTTTATATAGGGGTACAGGGTCAA 58.304 40.000 0.00 0.00 0.00 3.18
299 300 6.105139 TCTCTTTATATAGGGGTACAGGGTCA 59.895 42.308 0.00 0.00 0.00 4.02
300 301 6.436847 GTCTCTTTATATAGGGGTACAGGGTC 59.563 46.154 0.00 0.00 0.00 4.46
301 302 6.321321 GTCTCTTTATATAGGGGTACAGGGT 58.679 44.000 0.00 0.00 0.00 4.34
302 303 5.418209 CGTCTCTTTATATAGGGGTACAGGG 59.582 48.000 0.00 0.00 0.00 4.45
303 304 6.243900 TCGTCTCTTTATATAGGGGTACAGG 58.756 44.000 0.00 0.00 0.00 4.00
304 305 6.374894 CCTCGTCTCTTTATATAGGGGTACAG 59.625 46.154 0.00 0.00 0.00 2.74
305 306 6.044754 TCCTCGTCTCTTTATATAGGGGTACA 59.955 42.308 0.00 0.00 0.00 2.90
306 307 6.479884 TCCTCGTCTCTTTATATAGGGGTAC 58.520 44.000 0.00 0.00 0.00 3.34
307 308 6.708885 TCCTCGTCTCTTTATATAGGGGTA 57.291 41.667 0.00 0.00 0.00 3.69
308 309 5.572252 CTCCTCGTCTCTTTATATAGGGGT 58.428 45.833 0.00 0.00 0.00 4.95
309 310 4.399934 GCTCCTCGTCTCTTTATATAGGGG 59.600 50.000 0.00 0.00 0.00 4.79
310 311 5.010933 TGCTCCTCGTCTCTTTATATAGGG 58.989 45.833 0.00 0.00 0.00 3.53
311 312 6.576662 TTGCTCCTCGTCTCTTTATATAGG 57.423 41.667 0.00 0.00 0.00 2.57
312 313 7.821652 TGATTGCTCCTCGTCTCTTTATATAG 58.178 38.462 0.00 0.00 0.00 1.31
313 314 7.761038 TGATTGCTCCTCGTCTCTTTATATA 57.239 36.000 0.00 0.00 0.00 0.86
314 315 6.656632 TGATTGCTCCTCGTCTCTTTATAT 57.343 37.500 0.00 0.00 0.00 0.86
315 316 6.656632 ATGATTGCTCCTCGTCTCTTTATA 57.343 37.500 0.00 0.00 0.00 0.98
316 317 5.543507 ATGATTGCTCCTCGTCTCTTTAT 57.456 39.130 0.00 0.00 0.00 1.40
317 318 5.111989 CAATGATTGCTCCTCGTCTCTTTA 58.888 41.667 0.00 0.00 0.00 1.85
318 319 3.902881 ATGATTGCTCCTCGTCTCTTT 57.097 42.857 0.00 0.00 0.00 2.52
319 320 3.055530 ACAATGATTGCTCCTCGTCTCTT 60.056 43.478 4.84 0.00 0.00 2.85
320 321 2.499289 ACAATGATTGCTCCTCGTCTCT 59.501 45.455 4.84 0.00 0.00 3.10
321 322 2.898705 ACAATGATTGCTCCTCGTCTC 58.101 47.619 4.84 0.00 0.00 3.36
322 323 4.184629 GTTACAATGATTGCTCCTCGTCT 58.815 43.478 4.84 0.00 0.00 4.18
323 324 3.309954 GGTTACAATGATTGCTCCTCGTC 59.690 47.826 4.84 0.00 0.00 4.20
324 325 3.270877 GGTTACAATGATTGCTCCTCGT 58.729 45.455 4.84 0.00 0.00 4.18
325 326 2.614057 GGGTTACAATGATTGCTCCTCG 59.386 50.000 4.84 0.00 0.00 4.63
326 327 2.952310 GGGGTTACAATGATTGCTCCTC 59.048 50.000 4.84 1.80 0.00 3.71
327 328 2.582636 AGGGGTTACAATGATTGCTCCT 59.417 45.455 4.84 0.86 0.00 3.69
328 329 2.689983 CAGGGGTTACAATGATTGCTCC 59.310 50.000 4.84 5.34 0.00 4.70
329 330 3.620488 TCAGGGGTTACAATGATTGCTC 58.380 45.455 4.84 0.00 0.00 4.26
330 331 3.737559 TCAGGGGTTACAATGATTGCT 57.262 42.857 4.84 0.00 0.00 3.91
331 332 3.953612 TGATCAGGGGTTACAATGATTGC 59.046 43.478 4.84 0.00 32.68 3.56
332 333 6.321945 TGAATGATCAGGGGTTACAATGATTG 59.678 38.462 3.16 3.16 32.68 2.67
333 334 6.434302 TGAATGATCAGGGGTTACAATGATT 58.566 36.000 0.09 0.00 32.68 2.57
334 335 6.017211 TGAATGATCAGGGGTTACAATGAT 57.983 37.500 0.09 0.00 35.16 2.45
335 336 5.449297 TGAATGATCAGGGGTTACAATGA 57.551 39.130 0.09 0.00 0.00 2.57
336 337 6.720112 AATGAATGATCAGGGGTTACAATG 57.280 37.500 0.09 0.00 39.39 2.82
338 339 9.928618 TTATTAATGAATGATCAGGGGTTACAA 57.071 29.630 0.09 0.00 39.39 2.41
339 340 9.928618 TTTATTAATGAATGATCAGGGGTTACA 57.071 29.630 0.09 0.00 39.39 2.41
341 342 9.077885 GCTTTATTAATGAATGATCAGGGGTTA 57.922 33.333 0.09 0.00 39.39 2.85
342 343 7.786464 AGCTTTATTAATGAATGATCAGGGGTT 59.214 33.333 0.09 0.00 39.39 4.11
343 344 7.300658 AGCTTTATTAATGAATGATCAGGGGT 58.699 34.615 0.09 0.00 39.39 4.95
344 345 7.771927 AGCTTTATTAATGAATGATCAGGGG 57.228 36.000 0.09 0.00 39.39 4.79
345 346 9.512588 ACTAGCTTTATTAATGAATGATCAGGG 57.487 33.333 0.09 0.00 39.39 4.45
351 352 9.988815 GAGGAGACTAGCTTTATTAATGAATGA 57.011 33.333 0.00 0.00 44.43 2.57
352 353 9.213799 GGAGGAGACTAGCTTTATTAATGAATG 57.786 37.037 0.00 0.00 44.43 2.67
353 354 8.938883 TGGAGGAGACTAGCTTTATTAATGAAT 58.061 33.333 0.00 0.00 44.43 2.57
354 355 8.319057 TGGAGGAGACTAGCTTTATTAATGAA 57.681 34.615 0.00 0.00 44.43 2.57
355 356 7.914427 TGGAGGAGACTAGCTTTATTAATGA 57.086 36.000 0.00 0.00 44.43 2.57
356 357 9.646427 GTATGGAGGAGACTAGCTTTATTAATG 57.354 37.037 0.00 0.00 44.43 1.90
357 358 9.608718 AGTATGGAGGAGACTAGCTTTATTAAT 57.391 33.333 0.00 0.00 44.43 1.40
358 359 9.435570 AAGTATGGAGGAGACTAGCTTTATTAA 57.564 33.333 0.00 0.00 44.43 1.40
359 360 9.080097 GAAGTATGGAGGAGACTAGCTTTATTA 57.920 37.037 0.00 0.00 44.43 0.98
360 361 7.787424 AGAAGTATGGAGGAGACTAGCTTTATT 59.213 37.037 0.00 0.00 44.43 1.40
361 362 7.302184 AGAAGTATGGAGGAGACTAGCTTTAT 58.698 38.462 0.00 0.00 44.43 1.40
362 363 6.674573 AGAAGTATGGAGGAGACTAGCTTTA 58.325 40.000 0.00 0.00 44.43 1.85
363 364 5.524535 AGAAGTATGGAGGAGACTAGCTTT 58.475 41.667 0.00 0.00 44.43 3.51
364 365 5.103686 AGAGAAGTATGGAGGAGACTAGCTT 60.104 44.000 0.00 0.00 44.43 3.74
365 366 4.415512 AGAGAAGTATGGAGGAGACTAGCT 59.584 45.833 0.00 0.00 44.43 3.32
366 367 4.518970 CAGAGAAGTATGGAGGAGACTAGC 59.481 50.000 0.00 0.00 44.43 3.42
367 368 5.530915 CACAGAGAAGTATGGAGGAGACTAG 59.469 48.000 0.00 0.00 44.43 2.57
368 369 5.044772 ACACAGAGAAGTATGGAGGAGACTA 60.045 44.000 0.00 0.00 44.43 2.59
370 371 4.020543 ACACAGAGAAGTATGGAGGAGAC 58.979 47.826 0.00 0.00 0.00 3.36
371 372 4.263949 TGACACAGAGAAGTATGGAGGAGA 60.264 45.833 0.00 0.00 0.00 3.71
372 373 4.019858 TGACACAGAGAAGTATGGAGGAG 58.980 47.826 0.00 0.00 0.00 3.69
373 374 4.047627 TGACACAGAGAAGTATGGAGGA 57.952 45.455 0.00 0.00 0.00 3.71
374 375 5.350504 AATGACACAGAGAAGTATGGAGG 57.649 43.478 0.00 0.00 0.00 4.30
375 376 7.551585 AGTAAATGACACAGAGAAGTATGGAG 58.448 38.462 0.00 0.00 0.00 3.86
376 377 7.482169 AGTAAATGACACAGAGAAGTATGGA 57.518 36.000 0.00 0.00 0.00 3.41
377 378 8.553459 AAAGTAAATGACACAGAGAAGTATGG 57.447 34.615 0.00 0.00 0.00 2.74
378 379 8.376203 CGAAAGTAAATGACACAGAGAAGTATG 58.624 37.037 0.00 0.00 0.00 2.39
379 380 7.063544 GCGAAAGTAAATGACACAGAGAAGTAT 59.936 37.037 0.00 0.00 0.00 2.12
380 381 6.365247 GCGAAAGTAAATGACACAGAGAAGTA 59.635 38.462 0.00 0.00 0.00 2.24
381 382 5.177696 GCGAAAGTAAATGACACAGAGAAGT 59.822 40.000 0.00 0.00 0.00 3.01
382 383 5.612865 GCGAAAGTAAATGACACAGAGAAG 58.387 41.667 0.00 0.00 0.00 2.85
383 384 4.149922 CGCGAAAGTAAATGACACAGAGAA 59.850 41.667 0.00 0.00 0.00 2.87
384 385 3.673338 CGCGAAAGTAAATGACACAGAGA 59.327 43.478 0.00 0.00 0.00 3.10
385 386 3.428870 ACGCGAAAGTAAATGACACAGAG 59.571 43.478 15.93 0.00 0.00 3.35
386 387 3.183574 CACGCGAAAGTAAATGACACAGA 59.816 43.478 15.93 0.00 0.00 3.41
387 388 3.059868 ACACGCGAAAGTAAATGACACAG 60.060 43.478 15.93 0.00 0.00 3.66
388 389 2.867368 ACACGCGAAAGTAAATGACACA 59.133 40.909 15.93 0.00 0.00 3.72
389 390 3.515071 ACACGCGAAAGTAAATGACAC 57.485 42.857 15.93 0.00 0.00 3.67
390 391 3.362207 CGAACACGCGAAAGTAAATGACA 60.362 43.478 15.93 0.00 0.00 3.58
391 392 3.121261 TCGAACACGCGAAAGTAAATGAC 60.121 43.478 15.93 0.00 37.35 3.06
392 393 3.051327 TCGAACACGCGAAAGTAAATGA 58.949 40.909 15.93 2.24 37.35 2.57
393 394 3.121126 AGTCGAACACGCGAAAGTAAATG 60.121 43.478 15.93 0.00 42.55 2.32
394 395 3.054878 AGTCGAACACGCGAAAGTAAAT 58.945 40.909 15.93 0.00 42.55 1.40
395 396 2.462889 AGTCGAACACGCGAAAGTAAA 58.537 42.857 15.93 0.00 42.55 2.01
396 397 2.124011 AGTCGAACACGCGAAAGTAA 57.876 45.000 15.93 0.00 42.55 2.24
397 398 2.224079 AGTAGTCGAACACGCGAAAGTA 59.776 45.455 15.93 0.00 42.55 2.24
398 399 1.002033 AGTAGTCGAACACGCGAAAGT 60.002 47.619 15.93 5.29 42.55 2.66
399 400 1.682982 AGTAGTCGAACACGCGAAAG 58.317 50.000 15.93 4.52 42.55 2.62
400 401 2.046313 GAAGTAGTCGAACACGCGAAA 58.954 47.619 15.93 0.00 42.55 3.46
401 402 1.002576 TGAAGTAGTCGAACACGCGAA 60.003 47.619 15.93 0.00 42.55 4.70
402 403 0.587768 TGAAGTAGTCGAACACGCGA 59.412 50.000 15.93 0.00 38.07 5.87
403 404 1.121967 GTTGAAGTAGTCGAACACGCG 59.878 52.381 3.53 3.53 0.00 6.01
404 405 2.391879 AGTTGAAGTAGTCGAACACGC 58.608 47.619 0.00 0.00 0.00 5.34
405 406 3.596982 CGTAGTTGAAGTAGTCGAACACG 59.403 47.826 0.00 0.00 0.00 4.49
406 407 4.610536 GTCGTAGTTGAAGTAGTCGAACAC 59.389 45.833 0.00 0.00 0.00 3.32
407 408 4.609113 CGTCGTAGTTGAAGTAGTCGAACA 60.609 45.833 0.00 0.00 0.00 3.18
408 409 3.837448 CGTCGTAGTTGAAGTAGTCGAAC 59.163 47.826 0.00 0.00 0.00 3.95
409 410 3.665323 GCGTCGTAGTTGAAGTAGTCGAA 60.665 47.826 0.00 0.00 0.00 3.71
410 411 2.159787 GCGTCGTAGTTGAAGTAGTCGA 60.160 50.000 0.00 0.00 0.00 4.20
411 412 2.159734 AGCGTCGTAGTTGAAGTAGTCG 60.160 50.000 0.00 0.00 0.00 4.18
412 413 3.415370 GAGCGTCGTAGTTGAAGTAGTC 58.585 50.000 0.00 0.00 0.00 2.59
413 414 2.159734 CGAGCGTCGTAGTTGAAGTAGT 60.160 50.000 0.00 0.00 34.72 2.73
414 415 2.429061 CGAGCGTCGTAGTTGAAGTAG 58.571 52.381 0.00 0.00 34.72 2.57
415 416 1.464687 GCGAGCGTCGTAGTTGAAGTA 60.465 52.381 8.72 0.00 42.81 2.24
416 417 0.728466 GCGAGCGTCGTAGTTGAAGT 60.728 55.000 8.72 0.00 42.81 3.01
417 418 0.454620 AGCGAGCGTCGTAGTTGAAG 60.455 55.000 8.72 0.00 42.81 3.02
418 419 0.453950 GAGCGAGCGTCGTAGTTGAA 60.454 55.000 8.72 0.00 42.81 2.69
419 420 1.134075 GAGCGAGCGTCGTAGTTGA 59.866 57.895 8.72 0.00 42.81 3.18
420 421 0.858135 GAGAGCGAGCGTCGTAGTTG 60.858 60.000 8.72 0.00 42.81 3.16
421 422 1.424635 GAGAGCGAGCGTCGTAGTT 59.575 57.895 8.72 0.00 42.81 2.24
422 423 2.800581 CGAGAGCGAGCGTCGTAGT 61.801 63.158 12.56 0.00 42.81 2.73
423 424 2.053811 CGAGAGCGAGCGTCGTAG 60.054 66.667 12.56 0.00 42.81 3.51
441 442 1.738099 CCGGTCTGAGTTTGCGGAG 60.738 63.158 0.00 0.00 0.00 4.63
442 443 2.204461 TCCGGTCTGAGTTTGCGGA 61.204 57.895 0.00 0.00 0.00 5.54
443 444 2.027625 GTCCGGTCTGAGTTTGCGG 61.028 63.158 0.00 0.00 0.00 5.69
444 445 1.006102 AGTCCGGTCTGAGTTTGCG 60.006 57.895 0.00 0.00 0.00 4.85
445 446 1.009389 CGAGTCCGGTCTGAGTTTGC 61.009 60.000 5.76 0.00 0.00 3.68
446 447 1.009389 GCGAGTCCGGTCTGAGTTTG 61.009 60.000 5.76 0.00 36.06 2.93
447 448 1.289380 GCGAGTCCGGTCTGAGTTT 59.711 57.895 5.76 0.00 36.06 2.66
448 449 2.637383 GGCGAGTCCGGTCTGAGTT 61.637 63.158 5.76 0.00 36.06 3.01
449 450 3.063084 GGCGAGTCCGGTCTGAGT 61.063 66.667 5.76 0.00 36.06 3.41
467 468 2.065906 TTTTGTTCCGCAACTCCGCC 62.066 55.000 0.00 0.00 36.72 6.13
468 469 0.039527 ATTTTGTTCCGCAACTCCGC 60.040 50.000 0.00 0.00 36.72 5.54
469 470 1.724654 CGATTTTGTTCCGCAACTCCG 60.725 52.381 0.00 0.00 36.72 4.63
470 471 1.265905 ACGATTTTGTTCCGCAACTCC 59.734 47.619 0.00 0.00 36.72 3.85
471 472 2.571206 GACGATTTTGTTCCGCAACTC 58.429 47.619 0.00 0.00 36.72 3.01
472 473 1.265905 GGACGATTTTGTTCCGCAACT 59.734 47.619 0.00 0.00 36.72 3.16
473 474 1.664874 GGGACGATTTTGTTCCGCAAC 60.665 52.381 0.00 0.00 36.72 4.17
474 475 0.594110 GGGACGATTTTGTTCCGCAA 59.406 50.000 0.00 0.00 34.87 4.85
475 476 1.238625 GGGGACGATTTTGTTCCGCA 61.239 55.000 0.00 0.00 38.52 5.69
476 477 0.958876 AGGGGACGATTTTGTTCCGC 60.959 55.000 0.00 0.00 38.52 5.54
477 478 1.084289 GAGGGGACGATTTTGTTCCG 58.916 55.000 0.00 0.00 38.52 4.30
478 479 1.271707 TGGAGGGGACGATTTTGTTCC 60.272 52.381 0.00 0.00 36.72 3.62
479 480 1.810755 GTGGAGGGGACGATTTTGTTC 59.189 52.381 0.00 0.00 0.00 3.18
480 481 1.423921 AGTGGAGGGGACGATTTTGTT 59.576 47.619 0.00 0.00 0.00 2.83
481 482 1.003233 GAGTGGAGGGGACGATTTTGT 59.997 52.381 0.00 0.00 0.00 2.83
482 483 1.679032 GGAGTGGAGGGGACGATTTTG 60.679 57.143 0.00 0.00 0.00 2.44
803 812 1.169034 GGGAAGGAATGATGCGAGGC 61.169 60.000 0.00 0.00 0.00 4.70
808 818 2.149578 CAGATCGGGAAGGAATGATGC 58.850 52.381 0.00 0.00 0.00 3.91
929 939 1.453379 CGAGCTCTAGGGTTCGGGA 60.453 63.158 20.07 0.00 0.00 5.14
1434 1445 0.871722 CGAAATGCTCCGACAAACCA 59.128 50.000 0.00 0.00 0.00 3.67
1436 1447 1.263217 ACACGAAATGCTCCGACAAAC 59.737 47.619 0.00 0.00 0.00 2.93
1439 1450 2.442212 TAACACGAAATGCTCCGACA 57.558 45.000 0.00 0.00 0.00 4.35
1440 1451 4.331962 GAATTAACACGAAATGCTCCGAC 58.668 43.478 0.00 0.00 0.00 4.79
1441 1452 3.061563 CGAATTAACACGAAATGCTCCGA 59.938 43.478 0.00 0.00 0.00 4.55
2386 2397 9.965902 ACATAGGTAGACTTCATTTTTCTGAAT 57.034 29.630 0.00 0.00 34.76 2.57
2525 2539 2.165845 GCTTGTACAGTCCGTATCCAGT 59.834 50.000 0.00 0.00 31.20 4.00
2594 2608 5.079643 ACAAGCCTCCACAAAGATTAACAT 58.920 37.500 0.00 0.00 0.00 2.71
2779 2798 5.931294 TGTTAAACAGATGGTCCAGTACAA 58.069 37.500 0.00 0.00 0.00 2.41
2916 2935 3.870419 TCTTTCAAGCAATTGCAACCAAC 59.130 39.130 30.89 0.87 45.16 3.77
3505 3559 6.748333 AGTGAACTGGACAATATGAATGTG 57.252 37.500 0.00 0.00 0.00 3.21
3687 3867 4.532521 AGTTGTTCAGGGCATCTAGTTACT 59.467 41.667 0.00 0.00 0.00 2.24
3835 4015 7.360438 GGCACAATGTTAAAATAAAATTCCGCA 60.360 33.333 0.00 0.00 0.00 5.69
3959 4139 3.355378 TGCAGCATAAACTACAGCCAAT 58.645 40.909 0.00 0.00 0.00 3.16
3998 4259 5.359860 TCTCCAGCGATAGAAAGTTGATGTA 59.640 40.000 0.00 0.00 39.76 2.29
4023 4284 5.454329 GGAAACTTGTACTGGACTACTTGGT 60.454 44.000 0.00 0.00 0.00 3.67
4039 4300 4.952335 AGAGCCAGATAATTGGGAAACTTG 59.048 41.667 0.00 0.00 38.72 3.16
4168 4491 4.579454 ATGCCTTGATTATGTGATGTGC 57.421 40.909 0.00 0.00 0.00 4.57
4252 4575 9.486497 GTCAGCATCATCTAAATCTTCTATTGA 57.514 33.333 0.00 0.00 0.00 2.57
4392 4715 4.628074 TGAAACTTACCTCCAGAAAGTCG 58.372 43.478 0.00 0.00 32.42 4.18
4514 4847 2.755655 ACATCGTTGGGTCTCTGTAGAG 59.244 50.000 2.45 2.45 43.36 2.43
4550 4884 5.392767 AAGAGTATACAGCATACCATCCG 57.607 43.478 5.50 0.00 40.49 4.18
4551 4885 6.166982 GGAAAGAGTATACAGCATACCATCC 58.833 44.000 5.50 0.00 40.49 3.51
4576 4910 7.186804 ACAAACAATTCTAACAACTCTTCACG 58.813 34.615 0.00 0.00 0.00 4.35
5053 5408 3.367703 GCAGAATTTTGTACAGGCTGCAT 60.368 43.478 15.89 0.00 44.72 3.96
5257 5622 7.121168 ACAACCATGACATGTTGTTCTATAAGG 59.879 37.037 20.95 4.91 36.76 2.69
5434 5799 2.450476 GGACTTGCCTGAAATCCATGT 58.550 47.619 0.00 0.00 0.00 3.21
6100 6470 9.507329 AATGTATCTGGTATATAAGTTGGCAAG 57.493 33.333 0.00 0.00 0.00 4.01
6264 6634 7.158021 CCCAGATTATAGTTCAGATCCTCAAC 58.842 42.308 0.00 0.00 0.00 3.18
6311 6682 8.997323 CCTGGTAGATCAAAGAAATACATCATC 58.003 37.037 0.00 0.00 0.00 2.92
6588 6959 3.199946 GGAAGGACCACATGATGAACCTA 59.800 47.826 0.00 0.00 38.79 3.08
6689 7071 3.838317 TCAGTAGTGCAGTATCCAGGTTT 59.162 43.478 4.19 0.00 0.00 3.27
6690 7072 3.195825 GTCAGTAGTGCAGTATCCAGGTT 59.804 47.826 4.19 0.00 0.00 3.50
6691 7073 2.761208 GTCAGTAGTGCAGTATCCAGGT 59.239 50.000 4.19 0.00 0.00 4.00
6692 7074 2.101582 GGTCAGTAGTGCAGTATCCAGG 59.898 54.545 4.19 0.00 0.00 4.45
6693 7075 2.760650 TGGTCAGTAGTGCAGTATCCAG 59.239 50.000 4.19 0.00 0.00 3.86
6816 7198 8.134895 GGGCTATAAATCGAAATGAACAAATCA 58.865 33.333 0.00 0.00 43.67 2.57
7015 7397 0.327924 TGACATGGCAAGAACCGGAT 59.672 50.000 9.46 0.00 0.00 4.18
7018 7400 1.167851 ACATGACATGGCAAGAACCG 58.832 50.000 19.39 0.00 33.60 4.44
7198 7635 9.981114 TTATCATTAGCTATTCGTCAAAGATGA 57.019 29.630 0.00 0.00 0.00 2.92
7206 7643 8.804688 ACACTCTTTATCATTAGCTATTCGTC 57.195 34.615 0.00 0.00 0.00 4.20
7243 7972 2.325583 AGCAAAGACGACCTGAAACA 57.674 45.000 0.00 0.00 0.00 2.83
7303 8032 5.466728 CCCATACGTACCATCTCATTTTCTG 59.533 44.000 0.00 0.00 0.00 3.02
7361 8102 5.668471 AGCCTATACCTAACGGAAAAGTTC 58.332 41.667 0.00 0.00 35.70 3.01
7369 8110 9.498176 AAACAAATATTAGCCTATACCTAACGG 57.502 33.333 0.00 0.00 0.00 4.44
7439 8183 7.739444 TCCTATGTGGGATAGAAACCTATCATT 59.261 37.037 12.72 0.00 42.62 2.57
7440 8184 7.256399 TCCTATGTGGGATAGAAACCTATCAT 58.744 38.462 12.72 3.42 42.62 2.45
7441 8185 6.630131 TCCTATGTGGGATAGAAACCTATCA 58.370 40.000 12.72 0.00 42.62 2.15
7442 8186 7.554959 TTCCTATGTGGGATAGAAACCTATC 57.445 40.000 0.00 0.00 40.99 2.08
7453 8197 8.940012 AATAGATTCCTATTCCTATGTGGGAT 57.060 34.615 0.00 0.00 40.58 3.85
7454 8198 8.757307 AAATAGATTCCTATTCCTATGTGGGA 57.243 34.615 0.00 0.00 42.97 4.37
7455 8199 8.830741 AGAAATAGATTCCTATTCCTATGTGGG 58.169 37.037 0.00 0.00 42.97 4.61
7479 8223 8.868522 ATCCTTTGAAGTCATTTGATTGTAGA 57.131 30.769 0.00 0.00 0.00 2.59
7551 8298 5.350504 TTCAAGCCTCCTTTGATCTAGAG 57.649 43.478 0.00 0.00 0.00 2.43
7552 8299 4.383552 GCTTCAAGCCTCCTTTGATCTAGA 60.384 45.833 0.00 0.00 34.48 2.43
7553 8300 3.876320 GCTTCAAGCCTCCTTTGATCTAG 59.124 47.826 0.00 0.00 34.48 2.43
7554 8301 3.679917 CGCTTCAAGCCTCCTTTGATCTA 60.680 47.826 3.08 0.00 38.18 1.98
7555 8302 2.720915 GCTTCAAGCCTCCTTTGATCT 58.279 47.619 0.00 0.00 34.48 2.75
7556 8303 1.399791 CGCTTCAAGCCTCCTTTGATC 59.600 52.381 3.08 0.00 38.18 2.92
7557 8304 1.271597 ACGCTTCAAGCCTCCTTTGAT 60.272 47.619 3.08 0.00 38.18 2.57
7558 8305 0.108585 ACGCTTCAAGCCTCCTTTGA 59.891 50.000 3.08 0.00 38.18 2.69
7559 8306 1.808411 TACGCTTCAAGCCTCCTTTG 58.192 50.000 3.08 0.00 38.18 2.77
7560 8307 2.427506 CTTACGCTTCAAGCCTCCTTT 58.572 47.619 3.08 0.00 38.18 3.11
7561 8308 1.339151 CCTTACGCTTCAAGCCTCCTT 60.339 52.381 3.08 0.00 38.18 3.36
7562 8309 0.250513 CCTTACGCTTCAAGCCTCCT 59.749 55.000 3.08 0.00 38.18 3.69
7563 8310 0.036294 ACCTTACGCTTCAAGCCTCC 60.036 55.000 3.08 0.00 38.18 4.30
7564 8311 1.079503 CACCTTACGCTTCAAGCCTC 58.920 55.000 3.08 0.00 38.18 4.70
7590 8337 8.673251 ACCAAATGAGGCCTTATAATCTAGAAT 58.327 33.333 10.98 0.00 0.00 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.