Multiple sequence alignment - TraesCS5D01G130800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G130800 chr5D 100.000 4163 0 0 1 4163 207177232 207181394 0.000000e+00 7688.0
1 TraesCS5D01G130800 chr5D 93.567 171 7 3 3994 4163 406479573 406479740 6.910000e-63 252.0
2 TraesCS5D01G130800 chr5A 94.108 3632 140 26 16 3618 267003713 267007299 0.000000e+00 5454.0
3 TraesCS5D01G130800 chr5A 94.611 167 5 3 3997 4163 643338033 643338195 5.340000e-64 255.0
4 TraesCS5D01G130800 chr5A 88.158 76 3 2 3619 3694 267007319 267007388 7.420000e-13 86.1
5 TraesCS5D01G130800 chr5B 94.201 3035 102 18 484 3482 220583076 220580080 0.000000e+00 4562.0
6 TraesCS5D01G130800 chr5B 85.774 239 19 3 3513 3738 220573116 220572880 5.380000e-59 239.0
7 TraesCS5D01G130800 chr5B 93.023 86 6 0 3778 3863 220810516 220810601 4.370000e-25 126.0
8 TraesCS5D01G130800 chr4D 82.735 1338 202 21 1833 3145 88906030 88904697 0.000000e+00 1164.0
9 TraesCS5D01G130800 chr4A 82.431 1349 208 18 1822 3145 501639604 501638260 0.000000e+00 1151.0
10 TraesCS5D01G130800 chr4B 82.212 1338 209 22 1833 3145 125681273 125679940 0.000000e+00 1125.0
11 TraesCS5D01G130800 chr4B 83.099 213 35 1 3800 4012 495013834 495013623 4.250000e-45 193.0
12 TraesCS5D01G130800 chr3B 96.815 157 4 1 4007 4163 424123730 424123575 1.150000e-65 261.0
13 TraesCS5D01G130800 chr3B 96.154 156 5 1 4007 4162 230935717 230935563 1.920000e-63 254.0
14 TraesCS5D01G130800 chr1B 96.226 159 5 1 4005 4163 279177739 279177896 4.130000e-65 259.0
15 TraesCS5D01G130800 chr1B 100.000 30 0 0 3588 3617 328188871 328188900 5.810000e-04 56.5
16 TraesCS5D01G130800 chr7B 95.122 164 6 2 4000 4163 444228947 444228786 1.480000e-64 257.0
17 TraesCS5D01G130800 chr7B 93.529 170 9 2 3995 4163 421381658 421381490 6.910000e-63 252.0
18 TraesCS5D01G130800 chr6A 96.178 157 4 2 4007 4163 200000809 200000655 5.340000e-64 255.0
19 TraesCS5D01G130800 chr2A 94.611 167 5 3 3997 4163 69347390 69347552 5.340000e-64 255.0
20 TraesCS5D01G130800 chr6B 88.372 86 8 2 3915 3999 157582605 157582689 7.360000e-18 102.0
21 TraesCS5D01G130800 chr6B 87.059 85 11 0 3915 3999 157584418 157584502 3.430000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G130800 chr5D 207177232 207181394 4162 False 7688.00 7688 100.000 1 4163 1 chr5D.!!$F1 4162
1 TraesCS5D01G130800 chr5A 267003713 267007388 3675 False 2770.05 5454 91.133 16 3694 2 chr5A.!!$F2 3678
2 TraesCS5D01G130800 chr5B 220580080 220583076 2996 True 4562.00 4562 94.201 484 3482 1 chr5B.!!$R2 2998
3 TraesCS5D01G130800 chr4D 88904697 88906030 1333 True 1164.00 1164 82.735 1833 3145 1 chr4D.!!$R1 1312
4 TraesCS5D01G130800 chr4A 501638260 501639604 1344 True 1151.00 1151 82.431 1822 3145 1 chr4A.!!$R1 1323
5 TraesCS5D01G130800 chr4B 125679940 125681273 1333 True 1125.00 1125 82.212 1833 3145 1 chr4B.!!$R1 1312

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
399 404 0.039618 ACAACCGGATTTGCCCATCT 59.960 50.0 9.46 0.0 0.0 2.90 F
544 549 0.172803 ACGTCAGCCTAACCGACATC 59.827 55.0 0.00 0.0 0.0 3.06 F
819 831 0.178990 GGCCCACCTTGAAGTTCAGT 60.179 55.0 5.56 0.0 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2204 2223 1.939769 GAAGAGCTTCTCGGCGGAGT 61.940 60.000 19.51 1.61 41.26 3.85 R
2766 2806 1.421410 GGTACTGCCGCAGATTCGTG 61.421 60.000 27.12 0.00 35.18 4.35 R
3187 3249 4.025396 ACACAATCGATCGATGAATTGCTC 60.025 41.667 29.99 0.00 34.70 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 80 1.623811 GACACTGGCTCCTCCTTAACA 59.376 52.381 0.00 0.00 35.26 2.41
131 132 3.853330 CGCAACGGTCTCATGGCG 61.853 66.667 0.00 0.00 38.45 5.69
142 143 4.923942 CATGGCGGCGAGGATGCT 62.924 66.667 12.98 0.00 34.52 3.79
149 150 3.567797 GCGAGGATGCTGCCGAAC 61.568 66.667 0.00 0.00 0.00 3.95
197 198 3.435590 GCTCAAGCTGCCACACAA 58.564 55.556 0.00 0.00 38.21 3.33
209 210 0.944386 CCACACAAACTCCTTGTCCG 59.056 55.000 0.00 0.00 45.50 4.79
210 211 1.663695 CACACAAACTCCTTGTCCGT 58.336 50.000 0.00 0.00 45.50 4.69
211 212 1.330521 CACACAAACTCCTTGTCCGTG 59.669 52.381 0.00 0.00 45.50 4.94
213 214 1.157870 ACAAACTCCTTGTCCGTGCG 61.158 55.000 0.00 0.00 45.50 5.34
214 215 1.145377 AAACTCCTTGTCCGTGCGT 59.855 52.632 0.00 0.00 0.00 5.24
262 267 2.279120 GCTCCTCGCCATCGTCAG 60.279 66.667 0.00 0.00 36.96 3.51
339 344 4.832608 GCCATGACCCGGACGACC 62.833 72.222 0.73 0.00 0.00 4.79
340 345 4.157120 CCATGACCCGGACGACCC 62.157 72.222 0.73 0.00 0.00 4.46
341 346 4.157120 CATGACCCGGACGACCCC 62.157 72.222 0.73 0.00 0.00 4.95
342 347 4.393778 ATGACCCGGACGACCCCT 62.394 66.667 0.73 0.00 0.00 4.79
373 378 2.050269 CCGACACTGAGAACCACCT 58.950 57.895 0.00 0.00 0.00 4.00
385 390 0.755327 AACCACCTTGAGCCACAACC 60.755 55.000 0.00 0.00 34.56 3.77
399 404 0.039618 ACAACCGGATTTGCCCATCT 59.960 50.000 9.46 0.00 0.00 2.90
422 427 4.803426 GTGTGCGGAGGAGAGGCG 62.803 72.222 0.00 0.00 0.00 5.52
454 459 1.749258 GGAGATGGGGTTTGCCGAC 60.749 63.158 0.00 0.00 34.97 4.79
540 545 0.892358 AGTCACGTCAGCCTAACCGA 60.892 55.000 0.00 0.00 0.00 4.69
544 549 0.172803 ACGTCAGCCTAACCGACATC 59.827 55.000 0.00 0.00 0.00 3.06
555 560 4.634004 CCTAACCGACATCAATGCAAGTAA 59.366 41.667 0.00 0.00 0.00 2.24
557 562 3.674997 ACCGACATCAATGCAAGTAAGT 58.325 40.909 0.00 0.00 0.00 2.24
566 571 7.661437 ACATCAATGCAAGTAAGTAGTCTTGAA 59.339 33.333 8.74 0.00 42.22 2.69
573 578 4.561105 AGTAAGTAGTCTTGAACAGCAGC 58.439 43.478 0.00 0.00 35.36 5.25
594 599 3.260740 CGTATGCACGGTAAGGGTTTTA 58.739 45.455 0.00 0.00 44.59 1.52
656 668 0.317519 CGAACCTTCAACCGGTTTGC 60.318 55.000 19.55 0.00 44.41 3.68
684 696 4.559643 GGTTTATGGGATTTTAAACGTGCG 59.440 41.667 0.00 0.00 38.57 5.34
719 731 5.575606 CGGACATTTGATACACGAGTAAAGT 59.424 40.000 0.00 0.00 33.13 2.66
724 736 9.263538 ACATTTGATACACGAGTAAAGTTACAA 57.736 29.630 0.00 0.00 36.12 2.41
726 738 6.916401 TGATACACGAGTAAAGTTACAACG 57.084 37.500 14.50 14.50 39.56 4.10
729 741 3.725740 ACACGAGTAAAGTTACAACGACG 59.274 43.478 19.55 14.43 38.26 5.12
731 743 4.204978 CACGAGTAAAGTTACAACGACGTT 59.795 41.667 7.57 7.57 38.26 3.99
773 785 5.057149 ACGTATCATCCTATTTGGCAGTTC 58.943 41.667 0.00 0.00 35.26 3.01
784 796 4.898829 TTTGGCAGTTCCATATTGATCG 57.101 40.909 0.00 0.00 46.04 3.69
818 830 0.895559 GGGCCCACCTTGAAGTTCAG 60.896 60.000 19.95 0.00 35.85 3.02
819 831 0.178990 GGCCCACCTTGAAGTTCAGT 60.179 55.000 5.56 0.00 0.00 3.41
820 832 1.692411 GCCCACCTTGAAGTTCAGTT 58.308 50.000 5.56 0.00 0.00 3.16
821 833 1.609072 GCCCACCTTGAAGTTCAGTTC 59.391 52.381 5.56 0.00 0.00 3.01
822 834 2.930950 CCCACCTTGAAGTTCAGTTCA 58.069 47.619 5.56 0.00 34.56 3.18
823 835 2.880890 CCCACCTTGAAGTTCAGTTCAG 59.119 50.000 5.56 0.54 37.72 3.02
871 885 8.442632 AAGGGATTTACGTAGGTTTATTAAGC 57.557 34.615 0.00 0.00 0.00 3.09
891 905 6.932356 AAGCAGAATCATAATGTAGGTGTG 57.068 37.500 0.00 0.00 0.00 3.82
899 913 6.206395 TCATAATGTAGGTGTGGCATTTTG 57.794 37.500 0.00 0.00 34.89 2.44
911 925 3.993736 GTGGCATTTTGGTTGATACAACC 59.006 43.478 21.96 21.96 40.67 3.77
917 931 6.926272 GCATTTTGGTTGATACAACCTGTTTA 59.074 34.615 26.53 9.88 40.88 2.01
1271 1290 2.581354 CAACCTCTCCCTCGGCAG 59.419 66.667 0.00 0.00 0.00 4.85
1423 1442 2.202824 CGTTTATCGCGGGCCTGA 60.203 61.111 18.31 5.43 0.00 3.86
1877 1896 4.429212 CGCCGACGTCATGGTGGA 62.429 66.667 17.16 0.00 32.05 4.02
3187 3249 2.413310 ACGTAATAAACCCCAGCAGG 57.587 50.000 0.00 0.00 0.00 4.85
3195 3257 0.613012 AACCCCAGCAGGAGCAATTC 60.613 55.000 0.00 0.00 45.49 2.17
3255 3317 1.340248 TGACCGATCGGGCTAATTCTC 59.660 52.381 38.32 23.09 45.59 2.87
3256 3318 1.614413 GACCGATCGGGCTAATTCTCT 59.386 52.381 35.87 12.69 41.04 3.10
3517 3594 8.416329 GGAGTAATACAAATGCTGGAATTCATT 58.584 33.333 7.93 0.00 34.66 2.57
3526 3603 5.617528 TGCTGGAATTCATTGGCATTATT 57.382 34.783 7.93 0.00 0.00 1.40
3557 3634 5.620738 TCCCGAGATGAGAGAAATTCATT 57.379 39.130 0.00 0.00 35.50 2.57
3562 3639 6.238320 CCGAGATGAGAGAAATTCATTCCAAC 60.238 42.308 0.00 0.00 38.94 3.77
3566 3643 6.000891 TGAGAGAAATTCATTCCAACAACG 57.999 37.500 0.00 0.00 38.94 4.10
3588 3665 4.662145 GTGCAGGTTTTAGAATTCATCGG 58.338 43.478 8.44 0.00 0.00 4.18
3592 3669 5.708948 CAGGTTTTAGAATTCATCGGCAAA 58.291 37.500 8.44 0.00 0.00 3.68
3594 3671 6.473455 CAGGTTTTAGAATTCATCGGCAAATC 59.527 38.462 8.44 0.00 0.00 2.17
3648 3744 4.213482 GTCGAAGTTTGCTCCTATGTTTGT 59.787 41.667 0.00 0.00 0.00 2.83
3650 3746 5.298276 TCGAAGTTTGCTCCTATGTTTGTTT 59.702 36.000 0.00 0.00 0.00 2.83
3651 3747 5.399301 CGAAGTTTGCTCCTATGTTTGTTTG 59.601 40.000 0.00 0.00 0.00 2.93
3652 3748 4.620982 AGTTTGCTCCTATGTTTGTTTGC 58.379 39.130 0.00 0.00 0.00 3.68
3653 3749 4.342092 AGTTTGCTCCTATGTTTGTTTGCT 59.658 37.500 0.00 0.00 0.00 3.91
3654 3750 3.921119 TGCTCCTATGTTTGTTTGCTG 57.079 42.857 0.00 0.00 0.00 4.41
3656 3752 3.503363 TGCTCCTATGTTTGTTTGCTGAG 59.497 43.478 0.00 0.00 0.00 3.35
3657 3753 3.753272 GCTCCTATGTTTGTTTGCTGAGA 59.247 43.478 0.00 0.00 0.00 3.27
3660 3756 6.317789 TCCTATGTTTGTTTGCTGAGAAAG 57.682 37.500 0.00 0.00 0.00 2.62
3661 3757 5.827797 TCCTATGTTTGTTTGCTGAGAAAGT 59.172 36.000 0.00 0.00 0.00 2.66
3662 3758 6.995686 TCCTATGTTTGTTTGCTGAGAAAGTA 59.004 34.615 0.00 0.00 0.00 2.24
3663 3759 7.500892 TCCTATGTTTGTTTGCTGAGAAAGTAA 59.499 33.333 0.00 0.00 0.00 2.24
3664 3760 8.134895 CCTATGTTTGTTTGCTGAGAAAGTAAA 58.865 33.333 0.00 0.00 38.05 2.01
3665 3761 9.683069 CTATGTTTGTTTGCTGAGAAAGTAAAT 57.317 29.630 0.00 0.00 41.69 1.40
3694 3790 1.767088 TCATCATCCTCCCTGAGCAAG 59.233 52.381 0.00 0.00 0.00 4.01
3695 3791 0.473326 ATCATCCTCCCTGAGCAAGC 59.527 55.000 0.00 0.00 0.00 4.01
3696 3792 1.523258 CATCCTCCCTGAGCAAGCG 60.523 63.158 0.00 0.00 0.00 4.68
3697 3793 3.397613 ATCCTCCCTGAGCAAGCGC 62.398 63.158 0.00 0.00 38.99 5.92
3699 3795 4.399395 CTCCCTGAGCAAGCGCCA 62.399 66.667 2.29 0.00 39.83 5.69
3700 3796 3.694058 CTCCCTGAGCAAGCGCCAT 62.694 63.158 2.29 0.00 39.83 4.40
3701 3797 3.207669 CCCTGAGCAAGCGCCATC 61.208 66.667 2.29 0.00 39.83 3.51
3702 3798 2.437180 CCTGAGCAAGCGCCATCA 60.437 61.111 2.29 2.20 39.83 3.07
3703 3799 2.758089 CCTGAGCAAGCGCCATCAC 61.758 63.158 2.29 0.00 39.83 3.06
3704 3800 2.747460 TGAGCAAGCGCCATCACC 60.747 61.111 2.29 0.00 39.83 4.02
3705 3801 2.747460 GAGCAAGCGCCATCACCA 60.747 61.111 2.29 0.00 39.83 4.17
3706 3802 2.044650 AGCAAGCGCCATCACCAT 60.045 55.556 2.29 0.00 39.83 3.55
3707 3803 2.056481 GAGCAAGCGCCATCACCATC 62.056 60.000 2.29 0.00 39.83 3.51
3708 3804 2.409055 GCAAGCGCCATCACCATCA 61.409 57.895 2.29 0.00 0.00 3.07
3709 3805 1.430632 CAAGCGCCATCACCATCAC 59.569 57.895 2.29 0.00 0.00 3.06
3710 3806 1.028330 CAAGCGCCATCACCATCACT 61.028 55.000 2.29 0.00 0.00 3.41
3711 3807 0.322816 AAGCGCCATCACCATCACTT 60.323 50.000 2.29 0.00 0.00 3.16
3712 3808 0.745845 AGCGCCATCACCATCACTTC 60.746 55.000 2.29 0.00 0.00 3.01
3713 3809 0.745845 GCGCCATCACCATCACTTCT 60.746 55.000 0.00 0.00 0.00 2.85
3714 3810 1.293924 CGCCATCACCATCACTTCTC 58.706 55.000 0.00 0.00 0.00 2.87
3715 3811 1.673168 GCCATCACCATCACTTCTCC 58.327 55.000 0.00 0.00 0.00 3.71
3716 3812 1.748591 GCCATCACCATCACTTCTCCC 60.749 57.143 0.00 0.00 0.00 4.30
3717 3813 1.842562 CCATCACCATCACTTCTCCCT 59.157 52.381 0.00 0.00 0.00 4.20
3718 3814 2.421107 CCATCACCATCACTTCTCCCTG 60.421 54.545 0.00 0.00 0.00 4.45
3719 3815 2.325661 TCACCATCACTTCTCCCTGA 57.674 50.000 0.00 0.00 0.00 3.86
3720 3816 2.619931 TCACCATCACTTCTCCCTGAA 58.380 47.619 0.00 0.00 0.00 3.02
3721 3817 2.303022 TCACCATCACTTCTCCCTGAAC 59.697 50.000 0.00 0.00 0.00 3.18
3722 3818 2.038952 CACCATCACTTCTCCCTGAACA 59.961 50.000 0.00 0.00 0.00 3.18
3723 3819 2.711009 ACCATCACTTCTCCCTGAACAA 59.289 45.455 0.00 0.00 0.00 2.83
3724 3820 3.244700 ACCATCACTTCTCCCTGAACAAG 60.245 47.826 0.00 0.00 0.00 3.16
3725 3821 2.550830 TCACTTCTCCCTGAACAAGC 57.449 50.000 0.00 0.00 0.00 4.01
3726 3822 1.768275 TCACTTCTCCCTGAACAAGCA 59.232 47.619 0.00 0.00 0.00 3.91
3727 3823 2.172505 TCACTTCTCCCTGAACAAGCAA 59.827 45.455 0.00 0.00 0.00 3.91
3728 3824 2.291741 CACTTCTCCCTGAACAAGCAAC 59.708 50.000 0.00 0.00 0.00 4.17
3729 3825 2.173569 ACTTCTCCCTGAACAAGCAACT 59.826 45.455 0.00 0.00 0.00 3.16
3730 3826 2.550830 TCTCCCTGAACAAGCAACTC 57.449 50.000 0.00 0.00 0.00 3.01
3731 3827 1.072331 TCTCCCTGAACAAGCAACTCC 59.928 52.381 0.00 0.00 0.00 3.85
3732 3828 0.250295 TCCCTGAACAAGCAACTCCG 60.250 55.000 0.00 0.00 0.00 4.63
3733 3829 0.250295 CCCTGAACAAGCAACTCCGA 60.250 55.000 0.00 0.00 0.00 4.55
3734 3830 0.868406 CCTGAACAAGCAACTCCGAC 59.132 55.000 0.00 0.00 0.00 4.79
3735 3831 1.541233 CCTGAACAAGCAACTCCGACT 60.541 52.381 0.00 0.00 0.00 4.18
3736 3832 2.213499 CTGAACAAGCAACTCCGACTT 58.787 47.619 0.00 0.00 0.00 3.01
3737 3833 2.210116 TGAACAAGCAACTCCGACTTC 58.790 47.619 0.00 0.00 0.00 3.01
3738 3834 2.210116 GAACAAGCAACTCCGACTTCA 58.790 47.619 0.00 0.00 0.00 3.02
3739 3835 1.583054 ACAAGCAACTCCGACTTCAC 58.417 50.000 0.00 0.00 0.00 3.18
3740 3836 0.868406 CAAGCAACTCCGACTTCACC 59.132 55.000 0.00 0.00 0.00 4.02
3741 3837 0.600255 AAGCAACTCCGACTTCACCG 60.600 55.000 0.00 0.00 0.00 4.94
3742 3838 2.668280 GCAACTCCGACTTCACCGC 61.668 63.158 0.00 0.00 0.00 5.68
3743 3839 1.300620 CAACTCCGACTTCACCGCA 60.301 57.895 0.00 0.00 0.00 5.69
3744 3840 1.006102 AACTCCGACTTCACCGCAG 60.006 57.895 0.00 0.00 0.00 5.18
3745 3841 1.461091 AACTCCGACTTCACCGCAGA 61.461 55.000 0.00 0.00 0.00 4.26
3746 3842 1.251527 ACTCCGACTTCACCGCAGAT 61.252 55.000 0.00 0.00 0.00 2.90
3747 3843 0.803768 CTCCGACTTCACCGCAGATG 60.804 60.000 0.00 0.00 0.00 2.90
3748 3844 1.215382 CCGACTTCACCGCAGATGA 59.785 57.895 0.00 0.00 0.00 2.92
3749 3845 1.078759 CCGACTTCACCGCAGATGAC 61.079 60.000 0.00 0.00 0.00 3.06
3750 3846 1.078759 CGACTTCACCGCAGATGACC 61.079 60.000 0.00 0.00 0.00 4.02
3751 3847 0.037326 GACTTCACCGCAGATGACCA 60.037 55.000 0.00 0.00 0.00 4.02
3752 3848 0.320771 ACTTCACCGCAGATGACCAC 60.321 55.000 0.00 0.00 0.00 4.16
3753 3849 1.003839 TTCACCGCAGATGACCACC 60.004 57.895 0.00 0.00 0.00 4.61
3754 3850 1.480212 TTCACCGCAGATGACCACCT 61.480 55.000 0.00 0.00 0.00 4.00
3755 3851 1.448540 CACCGCAGATGACCACCTC 60.449 63.158 0.00 0.00 0.00 3.85
3756 3852 2.187946 CCGCAGATGACCACCTCC 59.812 66.667 0.00 0.00 0.00 4.30
3757 3853 2.187946 CGCAGATGACCACCTCCC 59.812 66.667 0.00 0.00 0.00 4.30
3758 3854 2.592308 GCAGATGACCACCTCCCC 59.408 66.667 0.00 0.00 0.00 4.81
3759 3855 3.049080 GCAGATGACCACCTCCCCC 62.049 68.421 0.00 0.00 0.00 5.40
3773 3869 2.863988 CCCCCTCCCCCAAACACT 60.864 66.667 0.00 0.00 0.00 3.55
3774 3870 2.763902 CCCCTCCCCCAAACACTC 59.236 66.667 0.00 0.00 0.00 3.51
3775 3871 1.852626 CCCCTCCCCCAAACACTCT 60.853 63.158 0.00 0.00 0.00 3.24
3776 3872 1.685820 CCCTCCCCCAAACACTCTC 59.314 63.158 0.00 0.00 0.00 3.20
3777 3873 1.296715 CCTCCCCCAAACACTCTCG 59.703 63.158 0.00 0.00 0.00 4.04
3778 3874 1.296715 CTCCCCCAAACACTCTCGG 59.703 63.158 0.00 0.00 0.00 4.63
3779 3875 1.460689 TCCCCCAAACACTCTCGGT 60.461 57.895 0.00 0.00 0.00 4.69
3780 3876 1.003718 CCCCCAAACACTCTCGGTC 60.004 63.158 0.00 0.00 0.00 4.79
3781 3877 1.003718 CCCCAAACACTCTCGGTCC 60.004 63.158 0.00 0.00 0.00 4.46
3782 3878 1.752198 CCCAAACACTCTCGGTCCA 59.248 57.895 0.00 0.00 0.00 4.02
3783 3879 0.602905 CCCAAACACTCTCGGTCCAC 60.603 60.000 0.00 0.00 0.00 4.02
3784 3880 0.393077 CCAAACACTCTCGGTCCACT 59.607 55.000 0.00 0.00 0.00 4.00
3785 3881 1.502231 CAAACACTCTCGGTCCACTG 58.498 55.000 0.00 0.00 0.00 3.66
3786 3882 0.249911 AAACACTCTCGGTCCACTGC 60.250 55.000 0.00 0.00 0.00 4.40
3787 3883 1.115930 AACACTCTCGGTCCACTGCT 61.116 55.000 0.00 0.00 0.00 4.24
3788 3884 1.214062 CACTCTCGGTCCACTGCTC 59.786 63.158 0.00 0.00 0.00 4.26
3789 3885 1.228583 ACTCTCGGTCCACTGCTCA 60.229 57.895 0.00 0.00 0.00 4.26
3790 3886 0.827925 ACTCTCGGTCCACTGCTCAA 60.828 55.000 0.00 0.00 0.00 3.02
3791 3887 0.389166 CTCTCGGTCCACTGCTCAAC 60.389 60.000 0.00 0.00 0.00 3.18
3792 3888 1.374758 CTCGGTCCACTGCTCAACC 60.375 63.158 0.00 0.00 0.00 3.77
3794 3890 2.426023 GGTCCACTGCTCAACCGT 59.574 61.111 0.00 0.00 0.00 4.83
3795 3891 1.227853 GGTCCACTGCTCAACCGTT 60.228 57.895 0.00 0.00 0.00 4.44
3796 3892 0.034337 GGTCCACTGCTCAACCGTTA 59.966 55.000 0.00 0.00 0.00 3.18
3797 3893 1.541670 GGTCCACTGCTCAACCGTTAA 60.542 52.381 0.00 0.00 0.00 2.01
3798 3894 2.215196 GTCCACTGCTCAACCGTTAAA 58.785 47.619 0.00 0.00 0.00 1.52
3799 3895 2.812011 GTCCACTGCTCAACCGTTAAAT 59.188 45.455 0.00 0.00 0.00 1.40
3800 3896 3.252458 GTCCACTGCTCAACCGTTAAATT 59.748 43.478 0.00 0.00 0.00 1.82
3801 3897 3.886505 TCCACTGCTCAACCGTTAAATTT 59.113 39.130 0.00 0.00 0.00 1.82
3802 3898 4.339814 TCCACTGCTCAACCGTTAAATTTT 59.660 37.500 0.00 0.00 0.00 1.82
3803 3899 4.444056 CCACTGCTCAACCGTTAAATTTTG 59.556 41.667 0.00 0.00 0.00 2.44
3804 3900 4.048504 ACTGCTCAACCGTTAAATTTTGC 58.951 39.130 0.00 0.00 0.00 3.68
3805 3901 4.046938 TGCTCAACCGTTAAATTTTGCA 57.953 36.364 0.00 0.00 0.00 4.08
3806 3902 4.626042 TGCTCAACCGTTAAATTTTGCAT 58.374 34.783 0.00 0.00 0.00 3.96
3807 3903 4.447054 TGCTCAACCGTTAAATTTTGCATG 59.553 37.500 0.00 0.00 0.00 4.06
3808 3904 4.143137 GCTCAACCGTTAAATTTTGCATGG 60.143 41.667 0.00 0.00 0.00 3.66
3809 3905 5.201713 TCAACCGTTAAATTTTGCATGGA 57.798 34.783 0.00 0.00 0.00 3.41
3810 3906 5.226396 TCAACCGTTAAATTTTGCATGGAG 58.774 37.500 0.00 0.00 0.00 3.86
3811 3907 5.010112 TCAACCGTTAAATTTTGCATGGAGA 59.990 36.000 0.00 0.00 0.00 3.71
3812 3908 5.659440 ACCGTTAAATTTTGCATGGAGAT 57.341 34.783 0.00 0.00 0.00 2.75
3813 3909 5.410067 ACCGTTAAATTTTGCATGGAGATG 58.590 37.500 0.00 0.00 0.00 2.90
3820 3916 4.443857 GCATGGAGATGCGTGCTA 57.556 55.556 10.86 0.00 45.50 3.49
3821 3917 2.232750 GCATGGAGATGCGTGCTAG 58.767 57.895 10.86 0.00 45.50 3.42
3822 3918 0.249615 GCATGGAGATGCGTGCTAGA 60.250 55.000 10.86 0.00 45.50 2.43
3823 3919 1.495878 CATGGAGATGCGTGCTAGAC 58.504 55.000 0.00 0.00 0.00 2.59
3824 3920 1.068281 CATGGAGATGCGTGCTAGACT 59.932 52.381 0.00 0.00 0.00 3.24
3825 3921 0.457443 TGGAGATGCGTGCTAGACTG 59.543 55.000 0.00 0.00 0.00 3.51
3826 3922 0.741326 GGAGATGCGTGCTAGACTGA 59.259 55.000 0.00 0.00 0.00 3.41
3827 3923 1.268999 GGAGATGCGTGCTAGACTGAG 60.269 57.143 0.00 0.00 0.00 3.35
3828 3924 0.102120 AGATGCGTGCTAGACTGAGC 59.898 55.000 0.00 0.00 43.16 4.26
3834 3930 4.796225 GCTAGACTGAGCACCGTC 57.204 61.111 0.00 0.00 42.36 4.79
3835 3931 1.139947 GCTAGACTGAGCACCGTCC 59.860 63.158 2.26 0.00 42.36 4.79
3836 3932 1.595993 GCTAGACTGAGCACCGTCCA 61.596 60.000 2.26 0.00 42.36 4.02
3837 3933 0.888619 CTAGACTGAGCACCGTCCAA 59.111 55.000 2.26 0.00 0.00 3.53
3838 3934 1.478510 CTAGACTGAGCACCGTCCAAT 59.521 52.381 2.26 0.00 0.00 3.16
3839 3935 0.036952 AGACTGAGCACCGTCCAATG 60.037 55.000 2.26 0.00 0.00 2.82
3840 3936 1.003355 ACTGAGCACCGTCCAATGG 60.003 57.895 0.00 0.00 0.00 3.16
3841 3937 1.296392 CTGAGCACCGTCCAATGGA 59.704 57.895 0.00 0.00 0.00 3.41
3842 3938 0.107508 CTGAGCACCGTCCAATGGAT 60.108 55.000 4.81 0.00 32.73 3.41
3843 3939 0.392863 TGAGCACCGTCCAATGGATG 60.393 55.000 14.41 14.41 38.38 3.51
3844 3940 0.392998 GAGCACCGTCCAATGGATGT 60.393 55.000 19.18 10.68 37.03 3.06
3845 3941 0.038166 AGCACCGTCCAATGGATGTT 59.962 50.000 19.18 2.99 37.03 2.71
3846 3942 0.171007 GCACCGTCCAATGGATGTTG 59.829 55.000 19.18 16.53 37.03 3.33
3847 3943 0.171007 CACCGTCCAATGGATGTTGC 59.829 55.000 19.18 0.00 37.03 4.17
3848 3944 0.251121 ACCGTCCAATGGATGTTGCA 60.251 50.000 19.18 0.00 37.03 4.08
3849 3945 0.452987 CCGTCCAATGGATGTTGCAG 59.547 55.000 19.18 0.89 37.03 4.41
3850 3946 0.179156 CGTCCAATGGATGTTGCAGC 60.179 55.000 13.21 0.00 34.27 5.25
3851 3947 0.889994 GTCCAATGGATGTTGCAGCA 59.110 50.000 4.81 5.46 32.73 4.41
3852 3948 1.479323 GTCCAATGGATGTTGCAGCAT 59.521 47.619 16.59 16.59 32.73 3.79
3853 3949 2.093869 GTCCAATGGATGTTGCAGCATT 60.094 45.455 17.66 0.00 32.73 3.56
3854 3950 2.568062 TCCAATGGATGTTGCAGCATTT 59.432 40.909 17.66 5.34 0.00 2.32
3855 3951 3.008157 TCCAATGGATGTTGCAGCATTTT 59.992 39.130 17.66 9.08 0.00 1.82
3856 3952 3.126171 CCAATGGATGTTGCAGCATTTTG 59.874 43.478 17.66 18.49 0.00 2.44
3857 3953 3.688694 ATGGATGTTGCAGCATTTTGT 57.311 38.095 17.66 0.00 0.00 2.83
3858 3954 3.029320 TGGATGTTGCAGCATTTTGTC 57.971 42.857 17.66 5.05 0.00 3.18
3859 3955 2.364647 TGGATGTTGCAGCATTTTGTCA 59.635 40.909 17.66 8.50 0.00 3.58
3860 3956 2.733026 GGATGTTGCAGCATTTTGTCAC 59.267 45.455 17.66 2.71 0.00 3.67
3861 3957 2.955477 TGTTGCAGCATTTTGTCACA 57.045 40.000 0.00 0.00 0.00 3.58
3862 3958 2.538437 TGTTGCAGCATTTTGTCACAC 58.462 42.857 0.00 0.00 0.00 3.82
3863 3959 1.860326 GTTGCAGCATTTTGTCACACC 59.140 47.619 0.00 0.00 0.00 4.16
3864 3960 0.030504 TGCAGCATTTTGTCACACCG 59.969 50.000 0.00 0.00 0.00 4.94
3865 3961 0.030638 GCAGCATTTTGTCACACCGT 59.969 50.000 0.00 0.00 0.00 4.83
3866 3962 1.535860 GCAGCATTTTGTCACACCGTT 60.536 47.619 0.00 0.00 0.00 4.44
3867 3963 2.808244 CAGCATTTTGTCACACCGTTT 58.192 42.857 0.00 0.00 0.00 3.60
3868 3964 2.535166 CAGCATTTTGTCACACCGTTTG 59.465 45.455 0.00 0.00 0.00 2.93
3869 3965 1.257675 GCATTTTGTCACACCGTTTGC 59.742 47.619 0.00 0.00 0.00 3.68
3870 3966 2.534298 CATTTTGTCACACCGTTTGCA 58.466 42.857 0.00 0.00 0.00 4.08
3871 3967 2.724977 TTTTGTCACACCGTTTGCAA 57.275 40.000 0.00 0.00 0.00 4.08
3872 3968 2.949451 TTTGTCACACCGTTTGCAAT 57.051 40.000 0.00 0.00 0.00 3.56
3873 3969 4.371855 TTTTGTCACACCGTTTGCAATA 57.628 36.364 0.00 0.00 0.00 1.90
3874 3970 4.576216 TTTGTCACACCGTTTGCAATAT 57.424 36.364 0.00 0.00 0.00 1.28
3875 3971 5.690997 TTTGTCACACCGTTTGCAATATA 57.309 34.783 0.00 0.00 0.00 0.86
3876 3972 5.888691 TTGTCACACCGTTTGCAATATAT 57.111 34.783 0.00 0.00 0.00 0.86
3877 3973 6.986904 TTGTCACACCGTTTGCAATATATA 57.013 33.333 0.00 0.00 0.00 0.86
3878 3974 7.561021 TTGTCACACCGTTTGCAATATATAT 57.439 32.000 0.00 0.00 0.00 0.86
3879 3975 7.561021 TGTCACACCGTTTGCAATATATATT 57.439 32.000 0.00 1.91 0.00 1.28
3880 3976 7.635423 TGTCACACCGTTTGCAATATATATTC 58.365 34.615 0.00 2.31 0.00 1.75
3881 3977 7.075741 GTCACACCGTTTGCAATATATATTCC 58.924 38.462 0.00 0.00 0.00 3.01
3882 3978 6.995686 TCACACCGTTTGCAATATATATTCCT 59.004 34.615 0.00 0.00 0.00 3.36
3883 3979 8.151596 TCACACCGTTTGCAATATATATTCCTA 58.848 33.333 0.00 0.00 0.00 2.94
3884 3980 8.227791 CACACCGTTTGCAATATATATTCCTAC 58.772 37.037 0.00 0.00 0.00 3.18
3885 3981 8.154856 ACACCGTTTGCAATATATATTCCTACT 58.845 33.333 0.00 0.00 0.00 2.57
3886 3982 8.443160 CACCGTTTGCAATATATATTCCTACTG 58.557 37.037 0.00 0.00 0.00 2.74
3887 3983 7.606456 ACCGTTTGCAATATATATTCCTACTGG 59.394 37.037 0.00 6.81 0.00 4.00
3888 3984 7.606456 CCGTTTGCAATATATATTCCTACTGGT 59.394 37.037 0.00 0.00 34.23 4.00
3889 3985 8.999431 CGTTTGCAATATATATTCCTACTGGTT 58.001 33.333 0.00 0.00 34.23 3.67
3891 3987 7.921786 TGCAATATATATTCCTACTGGTTGC 57.078 36.000 4.93 4.54 38.81 4.17
3892 3988 7.457561 TGCAATATATATTCCTACTGGTTGCA 58.542 34.615 4.93 6.93 43.82 4.08
3893 3989 7.607607 TGCAATATATATTCCTACTGGTTGCAG 59.392 37.037 4.93 0.00 41.97 4.41
3894 3990 7.414540 GCAATATATATTCCTACTGGTTGCAGC 60.415 40.741 4.93 0.00 38.37 5.25
3895 3991 3.931907 ATATTCCTACTGGTTGCAGCA 57.068 42.857 2.05 0.00 34.23 4.41
3896 3992 2.814805 ATTCCTACTGGTTGCAGCAT 57.185 45.000 2.05 0.00 34.23 3.79
3897 3993 2.113860 TTCCTACTGGTTGCAGCATC 57.886 50.000 2.05 0.00 34.23 3.91
3898 3994 0.253044 TCCTACTGGTTGCAGCATCC 59.747 55.000 14.85 14.85 34.23 3.51
3899 3995 0.035152 CCTACTGGTTGCAGCATCCA 60.035 55.000 21.72 21.72 32.98 3.41
3900 3996 1.089920 CTACTGGTTGCAGCATCCAC 58.910 55.000 19.68 4.12 31.03 4.02
3901 3997 0.322456 TACTGGTTGCAGCATCCACC 60.322 55.000 19.68 13.75 31.03 4.61
3902 3998 1.604308 CTGGTTGCAGCATCCACCA 60.604 57.895 19.68 17.41 31.03 4.17
3903 3999 0.968901 CTGGTTGCAGCATCCACCAT 60.969 55.000 19.68 0.00 31.03 3.55
3904 4000 0.542467 TGGTTGCAGCATCCACCATT 60.542 50.000 19.68 0.00 29.44 3.16
3905 4001 0.108520 GGTTGCAGCATCCACCATTG 60.109 55.000 16.55 0.00 0.00 2.82
3906 4002 0.738412 GTTGCAGCATCCACCATTGC 60.738 55.000 0.00 0.00 39.17 3.56
3911 4007 2.814805 AGCATCCACCATTGCTAGTT 57.185 45.000 0.00 0.00 46.92 2.24
3912 4008 2.372264 AGCATCCACCATTGCTAGTTG 58.628 47.619 0.00 0.00 46.92 3.16
3913 4009 1.202336 GCATCCACCATTGCTAGTTGC 60.202 52.381 0.00 0.00 43.25 4.17
3923 4019 2.460330 GCTAGTTGCAGCATGTCGT 58.540 52.632 2.55 0.00 41.40 4.34
3924 4020 0.371645 GCTAGTTGCAGCATGTCGTC 59.628 55.000 2.55 0.00 41.40 4.20
3925 4021 2.001812 CTAGTTGCAGCATGTCGTCT 57.998 50.000 2.55 0.00 39.31 4.18
3926 4022 1.923204 CTAGTTGCAGCATGTCGTCTC 59.077 52.381 2.55 0.00 39.31 3.36
3927 4023 0.033920 AGTTGCAGCATGTCGTCTCA 59.966 50.000 2.55 0.00 39.31 3.27
3928 4024 0.164647 GTTGCAGCATGTCGTCTCAC 59.835 55.000 0.00 0.00 39.31 3.51
3929 4025 0.950555 TTGCAGCATGTCGTCTCACC 60.951 55.000 0.00 0.00 39.31 4.02
3930 4026 2.447887 GCAGCATGTCGTCTCACCG 61.448 63.158 0.00 0.00 39.31 4.94
3931 4027 1.807165 CAGCATGTCGTCTCACCGG 60.807 63.158 0.00 0.00 0.00 5.28
3932 4028 2.261671 GCATGTCGTCTCACCGGT 59.738 61.111 0.00 0.00 0.00 5.28
3933 4029 1.805945 GCATGTCGTCTCACCGGTC 60.806 63.158 2.59 0.00 0.00 4.79
3934 4030 1.584495 CATGTCGTCTCACCGGTCA 59.416 57.895 2.59 0.00 0.00 4.02
3935 4031 0.732880 CATGTCGTCTCACCGGTCAC 60.733 60.000 2.59 0.04 0.00 3.67
3936 4032 1.176619 ATGTCGTCTCACCGGTCACA 61.177 55.000 2.59 0.95 0.00 3.58
3937 4033 1.361271 GTCGTCTCACCGGTCACAA 59.639 57.895 2.59 0.00 0.00 3.33
3938 4034 0.938168 GTCGTCTCACCGGTCACAAC 60.938 60.000 2.59 0.00 0.00 3.32
3939 4035 1.066752 CGTCTCACCGGTCACAACA 59.933 57.895 2.59 0.00 0.00 3.33
3940 4036 0.319555 CGTCTCACCGGTCACAACAT 60.320 55.000 2.59 0.00 0.00 2.71
3941 4037 1.429463 GTCTCACCGGTCACAACATC 58.571 55.000 2.59 0.00 0.00 3.06
3942 4038 1.000955 GTCTCACCGGTCACAACATCT 59.999 52.381 2.59 0.00 0.00 2.90
3943 4039 1.000843 TCTCACCGGTCACAACATCTG 59.999 52.381 2.59 0.00 0.00 2.90
3944 4040 0.602638 TCACCGGTCACAACATCTGC 60.603 55.000 2.59 0.00 0.00 4.26
3945 4041 1.302511 ACCGGTCACAACATCTGCC 60.303 57.895 0.00 0.00 0.00 4.85
3946 4042 1.302431 CCGGTCACAACATCTGCCA 60.302 57.895 0.00 0.00 0.00 4.92
3947 4043 0.677731 CCGGTCACAACATCTGCCAT 60.678 55.000 0.00 0.00 0.00 4.40
3948 4044 0.729116 CGGTCACAACATCTGCCATC 59.271 55.000 0.00 0.00 0.00 3.51
3949 4045 0.729116 GGTCACAACATCTGCCATCG 59.271 55.000 0.00 0.00 0.00 3.84
3950 4046 1.442769 GTCACAACATCTGCCATCGT 58.557 50.000 0.00 0.00 0.00 3.73
3951 4047 1.394917 GTCACAACATCTGCCATCGTC 59.605 52.381 0.00 0.00 0.00 4.20
3952 4048 1.001860 TCACAACATCTGCCATCGTCA 59.998 47.619 0.00 0.00 0.00 4.35
3953 4049 1.805943 CACAACATCTGCCATCGTCAA 59.194 47.619 0.00 0.00 0.00 3.18
3954 4050 2.421073 CACAACATCTGCCATCGTCAAT 59.579 45.455 0.00 0.00 0.00 2.57
3955 4051 2.679837 ACAACATCTGCCATCGTCAATC 59.320 45.455 0.00 0.00 0.00 2.67
3956 4052 1.575244 ACATCTGCCATCGTCAATCG 58.425 50.000 0.00 0.00 41.41 3.34
3957 4053 1.134699 ACATCTGCCATCGTCAATCGT 60.135 47.619 0.00 0.00 40.80 3.73
3958 4054 2.100749 ACATCTGCCATCGTCAATCGTA 59.899 45.455 0.00 0.00 40.80 3.43
3959 4055 2.492019 TCTGCCATCGTCAATCGTAG 57.508 50.000 0.00 0.00 40.80 3.51
3960 4056 0.855349 CTGCCATCGTCAATCGTAGC 59.145 55.000 0.00 0.00 40.80 3.58
3961 4057 0.174617 TGCCATCGTCAATCGTAGCA 59.825 50.000 0.00 0.00 40.80 3.49
3962 4058 0.577269 GCCATCGTCAATCGTAGCAC 59.423 55.000 0.00 0.00 40.80 4.40
3963 4059 0.846401 CCATCGTCAATCGTAGCACG 59.154 55.000 2.79 2.79 44.19 5.34
3964 4060 1.545759 CATCGTCAATCGTAGCACGT 58.454 50.000 8.22 0.00 43.14 4.49
3965 4061 1.252779 CATCGTCAATCGTAGCACGTG 59.747 52.381 12.28 12.28 43.14 4.49
3966 4062 0.518195 TCGTCAATCGTAGCACGTGA 59.482 50.000 22.23 0.00 43.14 4.35
3967 4063 0.633733 CGTCAATCGTAGCACGTGAC 59.366 55.000 22.23 10.94 41.33 3.67
3968 4064 0.989890 GTCAATCGTAGCACGTGACC 59.010 55.000 22.23 1.65 39.90 4.02
3969 4065 0.885879 TCAATCGTAGCACGTGACCT 59.114 50.000 22.23 10.51 43.14 3.85
3970 4066 1.135489 TCAATCGTAGCACGTGACCTC 60.135 52.381 22.23 0.35 43.14 3.85
3971 4067 0.885879 AATCGTAGCACGTGACCTCA 59.114 50.000 22.23 0.00 43.14 3.86
3972 4068 0.170561 ATCGTAGCACGTGACCTCAC 59.829 55.000 22.23 7.49 43.14 3.51
3973 4069 1.443872 CGTAGCACGTGACCTCACC 60.444 63.158 22.23 0.00 43.66 4.02
3974 4070 1.443872 GTAGCACGTGACCTCACCG 60.444 63.158 22.23 0.00 43.66 4.94
3975 4071 2.632544 TAGCACGTGACCTCACCGG 61.633 63.158 22.23 0.00 43.66 5.28
3983 4079 3.542676 ACCTCACCGGTCGCAACA 61.543 61.111 2.59 0.00 44.93 3.33
3984 4080 2.047274 CCTCACCGGTCGCAACAT 60.047 61.111 2.59 0.00 0.00 2.71
3985 4081 2.100631 CCTCACCGGTCGCAACATC 61.101 63.158 2.59 0.00 0.00 3.06
3986 4082 2.047655 TCACCGGTCGCAACATCC 60.048 61.111 2.59 0.00 0.00 3.51
3987 4083 3.487202 CACCGGTCGCAACATCCG 61.487 66.667 2.59 0.00 43.30 4.18
3990 4086 2.202690 CGGTCGCAACATCCGCTA 60.203 61.111 0.00 0.00 37.90 4.26
3991 4087 1.591594 CGGTCGCAACATCCGCTAT 60.592 57.895 0.00 0.00 37.90 2.97
3992 4088 1.151777 CGGTCGCAACATCCGCTATT 61.152 55.000 0.00 0.00 37.90 1.73
3993 4089 0.304705 GGTCGCAACATCCGCTATTG 59.695 55.000 0.00 0.00 0.00 1.90
3994 4090 1.286501 GTCGCAACATCCGCTATTGA 58.713 50.000 0.00 0.00 0.00 2.57
3995 4091 1.867233 GTCGCAACATCCGCTATTGAT 59.133 47.619 0.00 0.00 0.00 2.57
3996 4092 1.866601 TCGCAACATCCGCTATTGATG 59.133 47.619 0.00 0.00 44.13 3.07
3997 4093 1.069703 CGCAACATCCGCTATTGATGG 60.070 52.381 5.36 0.00 43.10 3.51
3998 4094 1.949525 GCAACATCCGCTATTGATGGT 59.050 47.619 5.36 0.00 43.10 3.55
3999 4095 2.358898 GCAACATCCGCTATTGATGGTT 59.641 45.455 5.36 0.00 43.10 3.67
4000 4096 3.793129 GCAACATCCGCTATTGATGGTTG 60.793 47.826 5.36 0.00 43.10 3.77
4001 4097 3.281727 ACATCCGCTATTGATGGTTGT 57.718 42.857 5.36 0.00 43.10 3.32
4002 4098 4.415881 ACATCCGCTATTGATGGTTGTA 57.584 40.909 5.36 0.00 43.10 2.41
4003 4099 4.380531 ACATCCGCTATTGATGGTTGTAG 58.619 43.478 5.36 0.00 43.10 2.74
4004 4100 2.833794 TCCGCTATTGATGGTTGTAGC 58.166 47.619 0.00 0.00 36.95 3.58
4005 4101 2.169561 TCCGCTATTGATGGTTGTAGCA 59.830 45.455 0.00 0.00 39.52 3.49
4006 4102 3.141398 CCGCTATTGATGGTTGTAGCAT 58.859 45.455 0.00 0.00 39.52 3.79
4007 4103 3.058708 CCGCTATTGATGGTTGTAGCATG 60.059 47.826 0.00 0.00 39.52 4.06
4008 4104 3.561310 CGCTATTGATGGTTGTAGCATGT 59.439 43.478 0.00 0.00 39.52 3.21
4009 4105 4.035558 CGCTATTGATGGTTGTAGCATGTT 59.964 41.667 0.00 0.00 39.52 2.71
4010 4106 5.236263 CGCTATTGATGGTTGTAGCATGTTA 59.764 40.000 0.00 0.00 39.52 2.41
4011 4107 6.564686 CGCTATTGATGGTTGTAGCATGTTAG 60.565 42.308 0.00 0.00 39.52 2.34
4012 4108 6.483307 GCTATTGATGGTTGTAGCATGTTAGA 59.517 38.462 0.00 0.00 36.31 2.10
4013 4109 6.932356 ATTGATGGTTGTAGCATGTTAGAG 57.068 37.500 0.00 0.00 36.31 2.43
4014 4110 5.420725 TGATGGTTGTAGCATGTTAGAGT 57.579 39.130 0.00 0.00 36.31 3.24
4015 4111 6.538945 TGATGGTTGTAGCATGTTAGAGTA 57.461 37.500 0.00 0.00 36.31 2.59
4016 4112 6.338146 TGATGGTTGTAGCATGTTAGAGTAC 58.662 40.000 0.00 0.00 36.31 2.73
4017 4113 4.740268 TGGTTGTAGCATGTTAGAGTACG 58.260 43.478 0.00 0.00 0.00 3.67
4018 4114 4.219070 TGGTTGTAGCATGTTAGAGTACGT 59.781 41.667 0.00 0.00 0.00 3.57
4019 4115 5.415389 TGGTTGTAGCATGTTAGAGTACGTA 59.585 40.000 0.00 0.00 0.00 3.57
4020 4116 6.072008 TGGTTGTAGCATGTTAGAGTACGTAA 60.072 38.462 0.00 0.00 0.00 3.18
4021 4117 6.976925 GGTTGTAGCATGTTAGAGTACGTAAT 59.023 38.462 0.00 0.00 0.00 1.89
4022 4118 7.043590 GGTTGTAGCATGTTAGAGTACGTAATG 60.044 40.741 0.00 0.00 0.00 1.90
4023 4119 6.500910 TGTAGCATGTTAGAGTACGTAATGG 58.499 40.000 0.00 0.00 0.00 3.16
4024 4120 4.945246 AGCATGTTAGAGTACGTAATGGG 58.055 43.478 0.00 0.00 0.00 4.00
4025 4121 3.493503 GCATGTTAGAGTACGTAATGGGC 59.506 47.826 0.00 0.00 0.00 5.36
4026 4122 3.806625 TGTTAGAGTACGTAATGGGCC 57.193 47.619 0.00 0.00 0.00 5.80
4027 4123 3.368248 TGTTAGAGTACGTAATGGGCCT 58.632 45.455 4.53 0.00 0.00 5.19
4028 4124 4.535781 TGTTAGAGTACGTAATGGGCCTA 58.464 43.478 4.53 0.00 0.00 3.93
4029 4125 4.955450 TGTTAGAGTACGTAATGGGCCTAA 59.045 41.667 4.53 0.00 0.00 2.69
4030 4126 5.599656 TGTTAGAGTACGTAATGGGCCTAAT 59.400 40.000 4.53 0.00 0.00 1.73
4031 4127 4.602340 AGAGTACGTAATGGGCCTAATG 57.398 45.455 4.53 0.00 0.00 1.90
4032 4128 3.323979 AGAGTACGTAATGGGCCTAATGG 59.676 47.826 4.53 0.00 0.00 3.16
4033 4129 2.370849 AGTACGTAATGGGCCTAATGGG 59.629 50.000 4.53 0.00 38.36 4.00
4042 4138 2.196776 CCTAATGGGCCTGGGCTG 59.803 66.667 20.47 5.64 41.60 4.85
4043 4139 2.196776 CTAATGGGCCTGGGCTGG 59.803 66.667 20.47 0.00 41.60 4.85
4051 4147 4.473520 CCTGGGCTGGCGGTACAG 62.474 72.222 11.04 11.04 41.41 2.74
4061 4157 4.800355 CGGTACAGCCCGTTAGTC 57.200 61.111 0.00 0.00 43.07 2.59
4062 4158 2.187073 CGGTACAGCCCGTTAGTCT 58.813 57.895 0.00 0.00 43.07 3.24
4063 4159 0.529378 CGGTACAGCCCGTTAGTCTT 59.471 55.000 0.00 0.00 43.07 3.01
4064 4160 1.745087 CGGTACAGCCCGTTAGTCTTA 59.255 52.381 0.00 0.00 43.07 2.10
4065 4161 2.223433 CGGTACAGCCCGTTAGTCTTAG 60.223 54.545 0.00 0.00 43.07 2.18
4066 4162 2.100418 GGTACAGCCCGTTAGTCTTAGG 59.900 54.545 0.00 0.00 0.00 2.69
4067 4163 1.192428 ACAGCCCGTTAGTCTTAGGG 58.808 55.000 0.00 0.00 46.44 3.53
4068 4164 1.192428 CAGCCCGTTAGTCTTAGGGT 58.808 55.000 1.07 0.00 45.48 4.34
4069 4165 1.553704 CAGCCCGTTAGTCTTAGGGTT 59.446 52.381 1.07 0.00 45.48 4.11
4070 4166 2.762327 CAGCCCGTTAGTCTTAGGGTTA 59.238 50.000 1.07 0.00 45.48 2.85
4071 4167 3.196254 CAGCCCGTTAGTCTTAGGGTTAA 59.804 47.826 1.07 0.00 45.48 2.01
4072 4168 4.035814 AGCCCGTTAGTCTTAGGGTTAAT 58.964 43.478 1.07 0.00 45.48 1.40
4073 4169 4.472470 AGCCCGTTAGTCTTAGGGTTAATT 59.528 41.667 1.07 0.00 45.48 1.40
4074 4170 5.662657 AGCCCGTTAGTCTTAGGGTTAATTA 59.337 40.000 1.07 0.00 45.48 1.40
4075 4171 5.987953 GCCCGTTAGTCTTAGGGTTAATTAG 59.012 44.000 1.07 0.00 45.48 1.73
4076 4172 6.183360 GCCCGTTAGTCTTAGGGTTAATTAGA 60.183 42.308 1.07 0.00 45.48 2.10
4077 4173 7.432059 CCCGTTAGTCTTAGGGTTAATTAGAG 58.568 42.308 0.00 0.00 39.05 2.43
4078 4174 7.286316 CCCGTTAGTCTTAGGGTTAATTAGAGA 59.714 40.741 0.00 0.00 39.05 3.10
4079 4175 8.858094 CCGTTAGTCTTAGGGTTAATTAGAGAT 58.142 37.037 0.00 0.00 0.00 2.75
4087 4183 9.694137 CTTAGGGTTAATTAGAGATAAAGGTCG 57.306 37.037 0.00 0.00 0.00 4.79
4088 4184 6.522946 AGGGTTAATTAGAGATAAAGGTCGC 58.477 40.000 0.00 0.00 0.00 5.19
4089 4185 6.326843 AGGGTTAATTAGAGATAAAGGTCGCT 59.673 38.462 0.00 0.00 32.84 4.93
4090 4186 6.990939 GGGTTAATTAGAGATAAAGGTCGCTT 59.009 38.462 0.00 0.00 30.69 4.68
4091 4187 7.041984 GGGTTAATTAGAGATAAAGGTCGCTTG 60.042 40.741 0.00 0.00 30.69 4.01
4092 4188 5.993106 AATTAGAGATAAAGGTCGCTTGC 57.007 39.130 0.00 0.00 30.69 4.01
4093 4189 4.737855 TTAGAGATAAAGGTCGCTTGCT 57.262 40.909 0.00 0.00 30.69 3.91
4094 4190 3.618690 AGAGATAAAGGTCGCTTGCTT 57.381 42.857 0.00 0.00 0.00 3.91
4095 4191 4.737855 AGAGATAAAGGTCGCTTGCTTA 57.262 40.909 0.00 0.00 0.00 3.09
4096 4192 4.688021 AGAGATAAAGGTCGCTTGCTTAG 58.312 43.478 0.00 0.00 0.00 2.18
4097 4193 3.798202 AGATAAAGGTCGCTTGCTTAGG 58.202 45.455 0.00 0.00 0.00 2.69
4098 4194 2.396590 TAAAGGTCGCTTGCTTAGGG 57.603 50.000 0.00 0.00 38.13 3.53
4099 4195 0.322546 AAAGGTCGCTTGCTTAGGGG 60.323 55.000 4.21 0.00 37.41 4.79
4100 4196 2.124695 GGTCGCTTGCTTAGGGGG 60.125 66.667 4.21 0.00 37.41 5.40
4101 4197 2.669240 GTCGCTTGCTTAGGGGGT 59.331 61.111 4.21 0.00 37.41 4.95
4102 4198 1.449778 GTCGCTTGCTTAGGGGGTC 60.450 63.158 4.21 0.00 37.41 4.46
4103 4199 1.916273 TCGCTTGCTTAGGGGGTCA 60.916 57.895 4.21 0.00 37.41 4.02
4104 4200 1.002624 CGCTTGCTTAGGGGGTCAA 60.003 57.895 0.00 0.00 33.37 3.18
4105 4201 1.026718 CGCTTGCTTAGGGGGTCAAG 61.027 60.000 0.00 0.00 39.00 3.02
4106 4202 0.038310 GCTTGCTTAGGGGGTCAAGT 59.962 55.000 0.00 0.00 38.44 3.16
4107 4203 1.280998 GCTTGCTTAGGGGGTCAAGTA 59.719 52.381 0.00 0.00 38.44 2.24
4108 4204 2.290705 GCTTGCTTAGGGGGTCAAGTAA 60.291 50.000 0.00 0.00 38.44 2.24
4109 4205 3.610911 CTTGCTTAGGGGGTCAAGTAAG 58.389 50.000 0.00 0.00 37.87 2.34
4110 4206 1.280998 TGCTTAGGGGGTCAAGTAAGC 59.719 52.381 6.08 6.08 45.04 3.09
4111 4207 1.408405 GCTTAGGGGGTCAAGTAAGCC 60.408 57.143 2.19 0.00 40.93 4.35
4112 4208 2.197465 CTTAGGGGGTCAAGTAAGCCT 58.803 52.381 0.00 0.00 37.00 4.58
4113 4209 2.354261 TAGGGGGTCAAGTAAGCCTT 57.646 50.000 0.00 0.00 37.00 4.35
4120 4216 2.571548 CAAGTAAGCCTTGCCTGGG 58.428 57.895 0.00 0.00 43.84 4.45
4121 4217 0.038166 CAAGTAAGCCTTGCCTGGGA 59.962 55.000 0.00 0.00 43.84 4.37
4122 4218 0.329596 AAGTAAGCCTTGCCTGGGAG 59.670 55.000 0.00 0.00 30.18 4.30
4123 4219 0.842467 AGTAAGCCTTGCCTGGGAGT 60.842 55.000 0.00 0.00 0.00 3.85
4124 4220 0.393132 GTAAGCCTTGCCTGGGAGTC 60.393 60.000 0.00 0.00 0.00 3.36
4125 4221 0.840288 TAAGCCTTGCCTGGGAGTCA 60.840 55.000 0.00 0.00 0.00 3.41
4126 4222 1.719063 AAGCCTTGCCTGGGAGTCAA 61.719 55.000 0.00 0.00 0.00 3.18
4127 4223 1.676967 GCCTTGCCTGGGAGTCAAG 60.677 63.158 0.00 0.21 37.52 3.02
4128 4224 1.763770 CCTTGCCTGGGAGTCAAGT 59.236 57.895 9.83 0.00 36.41 3.16
4129 4225 0.984230 CCTTGCCTGGGAGTCAAGTA 59.016 55.000 9.83 0.00 36.41 2.24
4130 4226 1.351017 CCTTGCCTGGGAGTCAAGTAA 59.649 52.381 9.83 0.00 36.41 2.24
4131 4227 2.224769 CCTTGCCTGGGAGTCAAGTAAA 60.225 50.000 9.83 0.00 36.41 2.01
4132 4228 2.561478 TGCCTGGGAGTCAAGTAAAC 57.439 50.000 0.00 0.00 0.00 2.01
4133 4229 1.073284 TGCCTGGGAGTCAAGTAAACC 59.927 52.381 0.00 0.00 0.00 3.27
4134 4230 1.351350 GCCTGGGAGTCAAGTAAACCT 59.649 52.381 0.00 0.00 0.00 3.50
4135 4231 2.615747 GCCTGGGAGTCAAGTAAACCTC 60.616 54.545 0.00 0.00 0.00 3.85
4136 4232 2.907042 CCTGGGAGTCAAGTAAACCTCT 59.093 50.000 0.00 0.00 0.00 3.69
4137 4233 3.055747 CCTGGGAGTCAAGTAAACCTCTC 60.056 52.174 0.00 0.00 0.00 3.20
4138 4234 3.835395 CTGGGAGTCAAGTAAACCTCTCT 59.165 47.826 0.00 0.00 0.00 3.10
4139 4235 5.006896 TGGGAGTCAAGTAAACCTCTCTA 57.993 43.478 0.00 0.00 0.00 2.43
4140 4236 5.590818 TGGGAGTCAAGTAAACCTCTCTAT 58.409 41.667 0.00 0.00 0.00 1.98
4141 4237 6.738635 TGGGAGTCAAGTAAACCTCTCTATA 58.261 40.000 0.00 0.00 0.00 1.31
4142 4238 7.363031 TGGGAGTCAAGTAAACCTCTCTATAT 58.637 38.462 0.00 0.00 0.00 0.86
4143 4239 8.508601 TGGGAGTCAAGTAAACCTCTCTATATA 58.491 37.037 0.00 0.00 0.00 0.86
4144 4240 9.364653 GGGAGTCAAGTAAACCTCTCTATATAA 57.635 37.037 0.00 0.00 0.00 0.98
4160 4256 9.899661 TCTCTATATAAAGAGAGGAGATGTAGC 57.100 37.037 1.67 0.00 45.54 3.58
4161 4257 9.679661 CTCTATATAAAGAGAGGAGATGTAGCA 57.320 37.037 0.00 0.00 44.93 3.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 0.317160 TGTCGCACACTCTGTAAGGG 59.683 55.000 0.00 0.00 43.45 3.95
39 40 1.670087 CCCTGTCGCACACTCTGTAAG 60.670 57.143 0.00 0.00 0.00 2.34
40 41 0.317160 CCCTGTCGCACACTCTGTAA 59.683 55.000 0.00 0.00 0.00 2.41
65 66 0.815615 CGCCATGTTAAGGAGGAGCC 60.816 60.000 0.00 0.00 0.00 4.70
95 96 1.546834 GTCAACTACGAGTCGGCATC 58.453 55.000 18.30 0.00 0.00 3.91
131 132 4.838152 TTCGGCAGCATCCTCGCC 62.838 66.667 0.00 0.00 42.64 5.54
142 143 4.287781 TTCGACTGCGGTTCGGCA 62.288 61.111 14.64 5.08 41.45 5.69
196 197 1.145377 ACGCACGGACAAGGAGTTT 59.855 52.632 0.00 0.00 0.00 2.66
197 198 1.594293 CACGCACGGACAAGGAGTT 60.594 57.895 0.00 0.00 0.00 3.01
209 210 1.291877 CTAGTTGAGGCCACACGCAC 61.292 60.000 5.01 0.00 40.31 5.34
210 211 1.005037 CTAGTTGAGGCCACACGCA 60.005 57.895 5.01 0.00 40.31 5.24
211 212 1.741770 CCTAGTTGAGGCCACACGC 60.742 63.158 5.01 0.01 38.96 5.34
213 214 0.250513 CCTCCTAGTTGAGGCCACAC 59.749 60.000 5.01 0.00 45.13 3.82
214 215 2.683916 CCTCCTAGTTGAGGCCACA 58.316 57.895 5.01 0.25 45.13 4.17
224 225 1.815757 ACAACAACACCCCTCCTAGT 58.184 50.000 0.00 0.00 0.00 2.57
233 234 0.307760 CGAGGAGCAACAACAACACC 59.692 55.000 0.00 0.00 0.00 4.16
262 267 4.142513 GCTCAATGAGAAGGTGGTGATTTC 60.143 45.833 15.38 0.00 0.00 2.17
339 344 4.366684 GGCAGGTGGTTCCCAGGG 62.367 72.222 0.00 0.00 32.34 4.45
340 345 4.722700 CGGCAGGTGGTTCCCAGG 62.723 72.222 0.00 0.00 32.34 4.45
341 346 3.636231 TCGGCAGGTGGTTCCCAG 61.636 66.667 0.00 0.00 32.34 4.45
342 347 3.948719 GTCGGCAGGTGGTTCCCA 61.949 66.667 0.00 0.00 36.75 4.37
344 349 2.668550 GTGTCGGCAGGTGGTTCC 60.669 66.667 0.00 0.00 0.00 3.62
345 350 1.961277 CAGTGTCGGCAGGTGGTTC 60.961 63.158 0.00 0.00 0.00 3.62
356 361 1.068588 TCAAGGTGGTTCTCAGTGTCG 59.931 52.381 0.00 0.00 0.00 4.35
358 363 1.202698 GCTCAAGGTGGTTCTCAGTGT 60.203 52.381 0.00 0.00 0.00 3.55
373 378 0.958091 CAAATCCGGTTGTGGCTCAA 59.042 50.000 0.00 0.00 0.00 3.02
385 390 1.779025 CGCAGAGATGGGCAAATCCG 61.779 60.000 0.00 0.00 34.94 4.18
412 417 2.896443 CCACCTTCGCCTCTCCTC 59.104 66.667 0.00 0.00 0.00 3.71
422 427 0.326264 ATCTCCACTGTGCCACCTTC 59.674 55.000 1.29 0.00 0.00 3.46
454 459 1.463674 ATTTAAGCAGGTTGGCCTCG 58.536 50.000 3.32 0.00 44.97 4.63
530 535 1.065491 TGCATTGATGTCGGTTAGGCT 60.065 47.619 0.00 0.00 0.00 4.58
540 545 7.161404 TCAAGACTACTTACTTGCATTGATGT 58.839 34.615 0.00 0.00 41.91 3.06
544 549 7.189693 TGTTCAAGACTACTTACTTGCATTG 57.810 36.000 0.00 0.00 41.91 2.82
555 560 1.341531 ACGCTGCTGTTCAAGACTACT 59.658 47.619 0.00 0.00 0.00 2.57
557 562 3.511699 CATACGCTGCTGTTCAAGACTA 58.488 45.455 0.00 0.00 0.00 2.59
594 599 1.006102 CGACTGAGCGGTTTCACCT 60.006 57.895 0.00 0.00 35.66 4.00
630 635 4.612412 TTGAAGGTTCGCGGGCGT 62.612 61.111 13.21 0.00 40.74 5.68
631 636 4.084888 GTTGAAGGTTCGCGGGCG 62.085 66.667 6.13 6.74 41.35 6.13
632 637 3.733960 GGTTGAAGGTTCGCGGGC 61.734 66.667 6.13 0.00 0.00 6.13
633 638 3.419759 CGGTTGAAGGTTCGCGGG 61.420 66.667 6.13 0.00 0.00 6.13
644 656 2.026522 CCGAAAGCAAACCGGTTGA 58.973 52.632 23.08 0.00 39.87 3.18
656 668 7.061326 CACGTTTAAAATCCCATAAACCGAAAG 59.939 37.037 0.00 0.00 38.28 2.62
662 674 4.559643 CCGCACGTTTAAAATCCCATAAAC 59.440 41.667 0.00 0.00 38.20 2.01
773 785 3.618594 CCGCCAACTATCGATCAATATGG 59.381 47.826 0.00 6.24 0.00 2.74
784 796 2.895372 CCCGTGCCGCCAACTATC 60.895 66.667 0.00 0.00 0.00 2.08
871 885 5.125356 TGCCACACCTACATTATGATTCTG 58.875 41.667 0.00 0.00 0.00 3.02
891 905 4.244862 CAGGTTGTATCAACCAAAATGCC 58.755 43.478 26.40 4.48 42.69 4.40
899 913 5.454520 CGGTTTAAACAGGTTGTATCAACC 58.545 41.667 19.57 19.99 40.58 3.77
1476 1495 4.521062 ATCTGCAGCTCGACGGCC 62.521 66.667 9.47 0.00 38.92 6.13
1554 1573 3.995669 GCCGAAATGCGCGCGATA 61.996 61.111 37.18 22.37 39.11 2.92
2204 2223 1.939769 GAAGAGCTTCTCGGCGGAGT 61.940 60.000 19.51 1.61 41.26 3.85
2766 2806 1.421410 GGTACTGCCGCAGATTCGTG 61.421 60.000 27.12 0.00 35.18 4.35
3187 3249 4.025396 ACACAATCGATCGATGAATTGCTC 60.025 41.667 29.99 0.00 34.70 4.26
3195 3257 5.965334 CCCTTTTAAACACAATCGATCGATG 59.035 40.000 29.99 23.72 34.70 3.84
3336 3411 2.426024 TCACCTCTTCGACCGATTTAGG 59.574 50.000 11.28 11.28 37.30 2.69
3480 3557 3.343617 TGTATTACTCCAGCAAACAGGC 58.656 45.455 0.00 0.00 0.00 4.85
3526 3603 2.027285 TCTCATCTCGGGAAACAATGCA 60.027 45.455 0.00 0.00 0.00 3.96
3539 3616 7.621428 TGTTGGAATGAATTTCTCTCATCTC 57.379 36.000 0.00 0.00 32.26 2.75
3557 3634 1.178276 AAAACCTGCACGTTGTTGGA 58.822 45.000 1.68 0.00 0.00 3.53
3562 3639 4.854399 TGAATTCTAAAACCTGCACGTTG 58.146 39.130 7.05 0.00 0.00 4.10
3566 3643 4.662145 CCGATGAATTCTAAAACCTGCAC 58.338 43.478 7.05 0.00 0.00 4.57
3588 3665 6.435428 TCTAAAACGGAGACAAAAGATTTGC 58.565 36.000 2.88 0.00 0.00 3.68
3592 3669 8.683615 ACTTTTTCTAAAACGGAGACAAAAGAT 58.316 29.630 17.28 7.42 36.24 2.40
3594 3671 7.966204 TCACTTTTTCTAAAACGGAGACAAAAG 59.034 33.333 0.00 0.00 37.24 2.27
3648 3744 8.946085 ACGATGAATATTTACTTTCTCAGCAAA 58.054 29.630 0.00 0.00 0.00 3.68
3650 3746 7.763985 TGACGATGAATATTTACTTTCTCAGCA 59.236 33.333 0.00 0.00 0.00 4.41
3651 3747 8.131455 TGACGATGAATATTTACTTTCTCAGC 57.869 34.615 0.00 0.00 0.00 4.26
3653 3749 9.816354 TGATGACGATGAATATTTACTTTCTCA 57.184 29.630 0.00 0.00 0.00 3.27
3657 3753 9.784531 AGGATGATGACGATGAATATTTACTTT 57.215 29.630 0.00 0.00 0.00 2.66
3660 3756 7.278868 GGGAGGATGATGACGATGAATATTTAC 59.721 40.741 0.00 0.00 0.00 2.01
3661 3757 7.180946 AGGGAGGATGATGACGATGAATATTTA 59.819 37.037 0.00 0.00 0.00 1.40
3662 3758 6.013032 AGGGAGGATGATGACGATGAATATTT 60.013 38.462 0.00 0.00 0.00 1.40
3663 3759 5.486775 AGGGAGGATGATGACGATGAATATT 59.513 40.000 0.00 0.00 0.00 1.28
3664 3760 5.028802 AGGGAGGATGATGACGATGAATAT 58.971 41.667 0.00 0.00 0.00 1.28
3665 3761 4.221482 CAGGGAGGATGATGACGATGAATA 59.779 45.833 0.00 0.00 0.00 1.75
3668 3764 1.966354 CAGGGAGGATGATGACGATGA 59.034 52.381 0.00 0.00 0.00 2.92
3694 3790 0.745845 AGAAGTGATGGTGATGGCGC 60.746 55.000 0.00 0.00 0.00 6.53
3695 3791 1.293924 GAGAAGTGATGGTGATGGCG 58.706 55.000 0.00 0.00 0.00 5.69
3696 3792 1.673168 GGAGAAGTGATGGTGATGGC 58.327 55.000 0.00 0.00 0.00 4.40
3697 3793 1.842562 AGGGAGAAGTGATGGTGATGG 59.157 52.381 0.00 0.00 0.00 3.51
3698 3794 2.502947 TCAGGGAGAAGTGATGGTGATG 59.497 50.000 0.00 0.00 0.00 3.07
3699 3795 2.837947 TCAGGGAGAAGTGATGGTGAT 58.162 47.619 0.00 0.00 0.00 3.06
3700 3796 2.303022 GTTCAGGGAGAAGTGATGGTGA 59.697 50.000 0.00 0.00 36.78 4.02
3701 3797 2.038952 TGTTCAGGGAGAAGTGATGGTG 59.961 50.000 0.00 0.00 36.78 4.17
3702 3798 2.338809 TGTTCAGGGAGAAGTGATGGT 58.661 47.619 0.00 0.00 36.78 3.55
3703 3799 3.341823 CTTGTTCAGGGAGAAGTGATGG 58.658 50.000 0.00 0.00 36.78 3.51
3704 3800 2.746362 GCTTGTTCAGGGAGAAGTGATG 59.254 50.000 0.00 0.00 36.78 3.07
3705 3801 2.373169 TGCTTGTTCAGGGAGAAGTGAT 59.627 45.455 0.00 0.00 36.78 3.06
3706 3802 1.768275 TGCTTGTTCAGGGAGAAGTGA 59.232 47.619 0.00 0.00 36.78 3.41
3707 3803 2.260844 TGCTTGTTCAGGGAGAAGTG 57.739 50.000 0.00 0.00 36.78 3.16
3708 3804 2.173569 AGTTGCTTGTTCAGGGAGAAGT 59.826 45.455 0.00 0.00 36.78 3.01
3709 3805 2.810852 GAGTTGCTTGTTCAGGGAGAAG 59.189 50.000 0.00 0.00 36.78 2.85
3710 3806 2.487265 GGAGTTGCTTGTTCAGGGAGAA 60.487 50.000 0.00 0.00 0.00 2.87
3711 3807 1.072331 GGAGTTGCTTGTTCAGGGAGA 59.928 52.381 0.00 0.00 0.00 3.71
3712 3808 1.528129 GGAGTTGCTTGTTCAGGGAG 58.472 55.000 0.00 0.00 0.00 4.30
3713 3809 0.250295 CGGAGTTGCTTGTTCAGGGA 60.250 55.000 0.00 0.00 0.00 4.20
3714 3810 0.250295 TCGGAGTTGCTTGTTCAGGG 60.250 55.000 0.00 0.00 0.00 4.45
3715 3811 0.868406 GTCGGAGTTGCTTGTTCAGG 59.132 55.000 0.00 0.00 0.00 3.86
3716 3812 1.871080 AGTCGGAGTTGCTTGTTCAG 58.129 50.000 0.00 0.00 0.00 3.02
3717 3813 2.210116 GAAGTCGGAGTTGCTTGTTCA 58.790 47.619 2.13 0.00 0.00 3.18
3718 3814 2.032808 GTGAAGTCGGAGTTGCTTGTTC 60.033 50.000 2.13 0.00 0.00 3.18
3719 3815 1.940613 GTGAAGTCGGAGTTGCTTGTT 59.059 47.619 2.13 0.00 0.00 2.83
3720 3816 1.583054 GTGAAGTCGGAGTTGCTTGT 58.417 50.000 2.13 0.00 0.00 3.16
3721 3817 0.868406 GGTGAAGTCGGAGTTGCTTG 59.132 55.000 2.13 0.00 0.00 4.01
3722 3818 0.600255 CGGTGAAGTCGGAGTTGCTT 60.600 55.000 2.13 0.00 0.00 3.91
3723 3819 1.006102 CGGTGAAGTCGGAGTTGCT 60.006 57.895 2.13 0.00 0.00 3.91
3724 3820 2.668280 GCGGTGAAGTCGGAGTTGC 61.668 63.158 2.13 0.00 0.00 4.17
3725 3821 1.284982 CTGCGGTGAAGTCGGAGTTG 61.285 60.000 2.13 0.00 40.37 3.16
3726 3822 1.006102 CTGCGGTGAAGTCGGAGTT 60.006 57.895 0.00 0.00 40.37 3.01
3727 3823 1.251527 ATCTGCGGTGAAGTCGGAGT 61.252 55.000 5.08 0.00 44.45 3.85
3728 3824 0.803768 CATCTGCGGTGAAGTCGGAG 60.804 60.000 0.00 0.00 45.25 4.63
3729 3825 1.215382 CATCTGCGGTGAAGTCGGA 59.785 57.895 0.00 0.00 0.00 4.55
3730 3826 1.078759 GTCATCTGCGGTGAAGTCGG 61.079 60.000 0.00 0.00 0.00 4.79
3731 3827 1.078759 GGTCATCTGCGGTGAAGTCG 61.079 60.000 0.00 0.00 0.00 4.18
3732 3828 0.037326 TGGTCATCTGCGGTGAAGTC 60.037 55.000 0.00 0.00 0.00 3.01
3733 3829 0.320771 GTGGTCATCTGCGGTGAAGT 60.321 55.000 0.00 0.00 0.00 3.01
3734 3830 1.021390 GGTGGTCATCTGCGGTGAAG 61.021 60.000 0.00 0.00 0.00 3.02
3735 3831 1.003839 GGTGGTCATCTGCGGTGAA 60.004 57.895 0.00 0.00 0.00 3.18
3736 3832 1.888436 GAGGTGGTCATCTGCGGTGA 61.888 60.000 0.00 0.00 0.00 4.02
3737 3833 1.448540 GAGGTGGTCATCTGCGGTG 60.449 63.158 0.00 0.00 0.00 4.94
3738 3834 2.660064 GGAGGTGGTCATCTGCGGT 61.660 63.158 0.00 0.00 0.00 5.68
3739 3835 2.187946 GGAGGTGGTCATCTGCGG 59.812 66.667 0.00 0.00 0.00 5.69
3740 3836 2.187946 GGGAGGTGGTCATCTGCG 59.812 66.667 0.00 0.00 29.81 5.18
3741 3837 2.592308 GGGGAGGTGGTCATCTGC 59.408 66.667 0.00 0.00 0.00 4.26
3742 3838 3.324713 GGGGGAGGTGGTCATCTG 58.675 66.667 0.00 0.00 0.00 2.90
3756 3852 2.863988 AGTGTTTGGGGGAGGGGG 60.864 66.667 0.00 0.00 0.00 5.40
3757 3853 1.852626 AGAGTGTTTGGGGGAGGGG 60.853 63.158 0.00 0.00 0.00 4.79
3758 3854 1.685820 GAGAGTGTTTGGGGGAGGG 59.314 63.158 0.00 0.00 0.00 4.30
3759 3855 1.296715 CGAGAGTGTTTGGGGGAGG 59.703 63.158 0.00 0.00 0.00 4.30
3760 3856 1.296715 CCGAGAGTGTTTGGGGGAG 59.703 63.158 0.00 0.00 0.00 4.30
3761 3857 1.460689 ACCGAGAGTGTTTGGGGGA 60.461 57.895 0.00 0.00 0.00 4.81
3762 3858 1.003718 GACCGAGAGTGTTTGGGGG 60.004 63.158 0.00 0.00 0.00 5.40
3763 3859 1.003718 GGACCGAGAGTGTTTGGGG 60.004 63.158 0.00 0.00 0.00 4.96
3764 3860 0.602905 GTGGACCGAGAGTGTTTGGG 60.603 60.000 0.00 0.00 0.00 4.12
3765 3861 0.393077 AGTGGACCGAGAGTGTTTGG 59.607 55.000 0.00 0.00 0.00 3.28
3766 3862 1.502231 CAGTGGACCGAGAGTGTTTG 58.498 55.000 0.00 0.00 0.00 2.93
3767 3863 0.249911 GCAGTGGACCGAGAGTGTTT 60.250 55.000 0.00 0.00 0.00 2.83
3768 3864 1.115930 AGCAGTGGACCGAGAGTGTT 61.116 55.000 0.00 0.00 0.00 3.32
3769 3865 1.528292 GAGCAGTGGACCGAGAGTGT 61.528 60.000 0.00 0.00 0.00 3.55
3770 3866 1.214062 GAGCAGTGGACCGAGAGTG 59.786 63.158 0.00 0.00 0.00 3.51
3771 3867 0.827925 TTGAGCAGTGGACCGAGAGT 60.828 55.000 0.00 0.00 0.00 3.24
3772 3868 0.389166 GTTGAGCAGTGGACCGAGAG 60.389 60.000 0.00 0.00 0.00 3.20
3773 3869 1.666011 GTTGAGCAGTGGACCGAGA 59.334 57.895 0.00 0.00 0.00 4.04
3774 3870 1.374758 GGTTGAGCAGTGGACCGAG 60.375 63.158 0.00 0.00 0.00 4.63
3775 3871 2.741092 GGTTGAGCAGTGGACCGA 59.259 61.111 0.00 0.00 0.00 4.69
3777 3873 0.034337 TAACGGTTGAGCAGTGGACC 59.966 55.000 3.07 0.00 0.00 4.46
3778 3874 1.873698 TTAACGGTTGAGCAGTGGAC 58.126 50.000 3.07 0.00 0.00 4.02
3779 3875 2.623878 TTTAACGGTTGAGCAGTGGA 57.376 45.000 3.07 0.00 0.00 4.02
3780 3876 3.915437 AATTTAACGGTTGAGCAGTGG 57.085 42.857 3.07 0.00 0.00 4.00
3781 3877 4.085107 GCAAAATTTAACGGTTGAGCAGTG 60.085 41.667 3.07 0.00 0.00 3.66
3782 3878 4.048504 GCAAAATTTAACGGTTGAGCAGT 58.951 39.130 3.07 0.00 0.00 4.40
3783 3879 4.047822 TGCAAAATTTAACGGTTGAGCAG 58.952 39.130 3.07 0.00 0.00 4.24
3784 3880 4.046938 TGCAAAATTTAACGGTTGAGCA 57.953 36.364 3.07 0.00 0.00 4.26
3785 3881 4.143137 CCATGCAAAATTTAACGGTTGAGC 60.143 41.667 3.07 0.00 0.00 4.26
3786 3882 5.226396 TCCATGCAAAATTTAACGGTTGAG 58.774 37.500 3.07 0.00 0.00 3.02
3787 3883 5.010112 TCTCCATGCAAAATTTAACGGTTGA 59.990 36.000 3.07 0.00 0.00 3.18
3788 3884 5.226396 TCTCCATGCAAAATTTAACGGTTG 58.774 37.500 3.07 0.00 0.00 3.77
3789 3885 5.461032 TCTCCATGCAAAATTTAACGGTT 57.539 34.783 0.00 0.00 0.00 4.44
3790 3886 5.410067 CATCTCCATGCAAAATTTAACGGT 58.590 37.500 0.00 0.00 0.00 4.83
3791 3887 5.954434 CATCTCCATGCAAAATTTAACGG 57.046 39.130 0.00 0.00 0.00 4.44
3804 3900 1.068281 AGTCTAGCACGCATCTCCATG 59.932 52.381 0.00 0.00 0.00 3.66
3805 3901 1.068281 CAGTCTAGCACGCATCTCCAT 59.932 52.381 0.00 0.00 0.00 3.41
3806 3902 0.457443 CAGTCTAGCACGCATCTCCA 59.543 55.000 0.00 0.00 0.00 3.86
3807 3903 0.741326 TCAGTCTAGCACGCATCTCC 59.259 55.000 0.00 0.00 0.00 3.71
3808 3904 1.863624 GCTCAGTCTAGCACGCATCTC 60.864 57.143 0.00 0.00 42.30 2.75
3809 3905 0.102120 GCTCAGTCTAGCACGCATCT 59.898 55.000 0.00 0.00 42.30 2.90
3810 3906 2.587574 GCTCAGTCTAGCACGCATC 58.412 57.895 0.00 0.00 42.30 3.91
3811 3907 4.823276 GCTCAGTCTAGCACGCAT 57.177 55.556 0.00 0.00 42.30 4.73
3817 3913 1.139947 GGACGGTGCTCAGTCTAGC 59.860 63.158 16.61 0.00 43.08 3.42
3818 3914 0.888619 TTGGACGGTGCTCAGTCTAG 59.111 55.000 16.61 0.00 38.48 2.43
3819 3915 1.204704 CATTGGACGGTGCTCAGTCTA 59.795 52.381 16.61 9.58 38.48 2.59
3820 3916 0.036952 CATTGGACGGTGCTCAGTCT 60.037 55.000 16.61 0.00 38.48 3.24
3821 3917 1.021390 CCATTGGACGGTGCTCAGTC 61.021 60.000 10.11 10.11 37.89 3.51
3822 3918 1.003355 CCATTGGACGGTGCTCAGT 60.003 57.895 0.00 0.00 0.00 3.41
3823 3919 0.107508 ATCCATTGGACGGTGCTCAG 60.108 55.000 7.76 0.00 32.98 3.35
3824 3920 0.392863 CATCCATTGGACGGTGCTCA 60.393 55.000 7.76 0.00 32.98 4.26
3825 3921 0.392998 ACATCCATTGGACGGTGCTC 60.393 55.000 7.76 0.00 32.98 4.26
3826 3922 0.038166 AACATCCATTGGACGGTGCT 59.962 50.000 7.76 0.00 32.98 4.40
3827 3923 0.171007 CAACATCCATTGGACGGTGC 59.829 55.000 7.76 0.00 32.98 5.01
3828 3924 0.171007 GCAACATCCATTGGACGGTG 59.829 55.000 12.42 12.42 32.98 4.94
3829 3925 0.251121 TGCAACATCCATTGGACGGT 60.251 50.000 7.76 6.78 32.98 4.83
3830 3926 0.452987 CTGCAACATCCATTGGACGG 59.547 55.000 7.76 6.10 32.98 4.79
3831 3927 0.179156 GCTGCAACATCCATTGGACG 60.179 55.000 7.76 1.47 32.98 4.79
3832 3928 0.889994 TGCTGCAACATCCATTGGAC 59.110 50.000 7.76 0.00 32.98 4.02
3833 3929 1.855295 ATGCTGCAACATCCATTGGA 58.145 45.000 8.08 8.08 35.55 3.53
3834 3930 2.684001 AATGCTGCAACATCCATTGG 57.316 45.000 6.36 0.00 0.00 3.16
3835 3931 3.749088 ACAAAATGCTGCAACATCCATTG 59.251 39.130 6.36 15.80 0.00 2.82
3836 3932 3.998341 GACAAAATGCTGCAACATCCATT 59.002 39.130 6.36 0.00 0.00 3.16
3837 3933 3.007074 TGACAAAATGCTGCAACATCCAT 59.993 39.130 6.36 0.00 0.00 3.41
3838 3934 2.364647 TGACAAAATGCTGCAACATCCA 59.635 40.909 6.36 0.00 0.00 3.41
3839 3935 2.733026 GTGACAAAATGCTGCAACATCC 59.267 45.455 6.36 0.00 0.00 3.51
3840 3936 3.182972 GTGTGACAAAATGCTGCAACATC 59.817 43.478 6.36 1.18 0.00 3.06
3841 3937 3.125316 GTGTGACAAAATGCTGCAACAT 58.875 40.909 6.36 0.00 0.00 2.71
3842 3938 2.538437 GTGTGACAAAATGCTGCAACA 58.462 42.857 6.36 1.12 0.00 3.33
3843 3939 1.860326 GGTGTGACAAAATGCTGCAAC 59.140 47.619 6.36 0.00 0.00 4.17
3844 3940 1.535649 CGGTGTGACAAAATGCTGCAA 60.536 47.619 6.36 0.00 0.00 4.08
3845 3941 0.030504 CGGTGTGACAAAATGCTGCA 59.969 50.000 4.13 4.13 0.00 4.41
3846 3942 0.030638 ACGGTGTGACAAAATGCTGC 59.969 50.000 0.00 0.00 0.00 5.25
3847 3943 2.490328 AACGGTGTGACAAAATGCTG 57.510 45.000 0.00 0.00 0.00 4.41
3848 3944 2.808244 CAAACGGTGTGACAAAATGCT 58.192 42.857 0.00 0.00 0.00 3.79
3849 3945 1.257675 GCAAACGGTGTGACAAAATGC 59.742 47.619 1.57 0.00 0.00 3.56
3850 3946 2.534298 TGCAAACGGTGTGACAAAATG 58.466 42.857 1.57 0.00 0.00 2.32
3851 3947 2.949451 TGCAAACGGTGTGACAAAAT 57.051 40.000 1.57 0.00 0.00 1.82
3852 3948 2.724977 TTGCAAACGGTGTGACAAAA 57.275 40.000 1.57 0.00 0.00 2.44
3853 3949 2.949451 ATTGCAAACGGTGTGACAAA 57.051 40.000 1.71 0.00 0.00 2.83
3854 3950 5.888691 ATATATTGCAAACGGTGTGACAA 57.111 34.783 1.71 6.56 0.00 3.18
3855 3951 7.254966 GGAATATATATTGCAAACGGTGTGACA 60.255 37.037 18.94 0.00 34.61 3.58
3856 3952 7.041372 AGGAATATATATTGCAAACGGTGTGAC 60.041 37.037 23.86 2.24 36.60 3.67
3857 3953 6.995686 AGGAATATATATTGCAAACGGTGTGA 59.004 34.615 23.86 0.00 36.60 3.58
3858 3954 7.202016 AGGAATATATATTGCAAACGGTGTG 57.798 36.000 23.86 0.00 36.60 3.82
3859 3955 8.154856 AGTAGGAATATATATTGCAAACGGTGT 58.845 33.333 23.86 7.70 36.60 4.16
3860 3956 8.443160 CAGTAGGAATATATATTGCAAACGGTG 58.557 37.037 23.86 14.25 36.60 4.94
3861 3957 7.606456 CCAGTAGGAATATATATTGCAAACGGT 59.394 37.037 23.86 8.87 36.60 4.83
3862 3958 7.606456 ACCAGTAGGAATATATATTGCAAACGG 59.394 37.037 23.86 22.99 36.60 4.44
3863 3959 8.547967 ACCAGTAGGAATATATATTGCAAACG 57.452 34.615 23.86 16.72 36.60 3.60
3865 3961 8.792633 GCAACCAGTAGGAATATATATTGCAAA 58.207 33.333 23.86 12.08 38.78 3.68
3866 3962 7.941790 TGCAACCAGTAGGAATATATATTGCAA 59.058 33.333 23.86 0.00 43.96 4.08
3867 3963 7.457561 TGCAACCAGTAGGAATATATATTGCA 58.542 34.615 23.86 15.96 44.51 4.08
3868 3964 7.414540 GCTGCAACCAGTAGGAATATATATTGC 60.415 40.741 16.81 16.81 41.26 3.56
3869 3965 7.607607 TGCTGCAACCAGTAGGAATATATATTG 59.392 37.037 12.74 0.00 41.26 1.90
3870 3966 7.689299 TGCTGCAACCAGTAGGAATATATATT 58.311 34.615 7.72 7.72 41.26 1.28
3871 3967 7.257790 TGCTGCAACCAGTAGGAATATATAT 57.742 36.000 0.00 0.00 41.26 0.86
3872 3968 6.680148 TGCTGCAACCAGTAGGAATATATA 57.320 37.500 0.00 0.00 41.26 0.86
3873 3969 5.567037 TGCTGCAACCAGTAGGAATATAT 57.433 39.130 0.00 0.00 41.26 0.86
3874 3970 5.513094 GGATGCTGCAACCAGTAGGAATATA 60.513 44.000 22.30 0.00 41.26 0.86
3875 3971 3.931907 TGCTGCAACCAGTAGGAATAT 57.068 42.857 0.00 0.00 41.26 1.28
3876 3972 3.433598 GGATGCTGCAACCAGTAGGAATA 60.434 47.826 22.30 0.00 41.26 1.75
3877 3973 2.648059 GATGCTGCAACCAGTAGGAAT 58.352 47.619 6.36 0.00 41.26 3.01
3878 3974 1.340017 GGATGCTGCAACCAGTAGGAA 60.340 52.381 22.30 0.00 41.26 3.36
3879 3975 0.253044 GGATGCTGCAACCAGTAGGA 59.747 55.000 22.30 0.00 41.26 2.94
3880 3976 0.035152 TGGATGCTGCAACCAGTAGG 60.035 55.000 25.42 0.00 41.26 3.18
3881 3977 1.089920 GTGGATGCTGCAACCAGTAG 58.910 55.000 28.97 0.00 36.99 2.57
3882 3978 0.322456 GGTGGATGCTGCAACCAGTA 60.322 55.000 28.97 7.58 36.99 2.74
3883 3979 1.604593 GGTGGATGCTGCAACCAGT 60.605 57.895 28.97 1.61 36.99 4.00
3884 3980 0.968901 ATGGTGGATGCTGCAACCAG 60.969 55.000 28.97 0.00 36.99 4.00
3885 3981 0.542467 AATGGTGGATGCTGCAACCA 60.542 50.000 25.42 25.42 33.96 3.67
3886 3982 0.108520 CAATGGTGGATGCTGCAACC 60.109 55.000 20.72 20.72 0.00 3.77
3887 3983 0.738412 GCAATGGTGGATGCTGCAAC 60.738 55.000 6.36 3.28 39.46 4.17
3888 3984 1.592743 GCAATGGTGGATGCTGCAA 59.407 52.632 6.36 0.00 39.46 4.08
3889 3985 3.290567 GCAATGGTGGATGCTGCA 58.709 55.556 4.13 4.13 39.46 4.41
3893 3989 1.202336 GCAACTAGCAATGGTGGATGC 60.202 52.381 14.12 14.12 44.79 3.91
3894 3990 2.857592 GCAACTAGCAATGGTGGATG 57.142 50.000 2.13 2.05 44.79 3.51
3905 4001 0.371645 GACGACATGCTGCAACTAGC 59.628 55.000 6.36 0.00 43.95 3.42
3906 4002 1.923204 GAGACGACATGCTGCAACTAG 59.077 52.381 6.36 1.57 0.00 2.57
3907 4003 1.272212 TGAGACGACATGCTGCAACTA 59.728 47.619 6.36 0.00 0.00 2.24
3908 4004 0.033920 TGAGACGACATGCTGCAACT 59.966 50.000 6.36 0.00 0.00 3.16
3909 4005 0.164647 GTGAGACGACATGCTGCAAC 59.835 55.000 6.36 0.42 0.00 4.17
3910 4006 0.950555 GGTGAGACGACATGCTGCAA 60.951 55.000 6.36 0.00 0.00 4.08
3911 4007 1.374631 GGTGAGACGACATGCTGCA 60.375 57.895 4.13 4.13 0.00 4.41
3912 4008 2.447887 CGGTGAGACGACATGCTGC 61.448 63.158 0.00 0.00 35.47 5.25
3913 4009 1.807165 CCGGTGAGACGACATGCTG 60.807 63.158 0.00 0.00 35.47 4.41
3914 4010 2.214181 GACCGGTGAGACGACATGCT 62.214 60.000 14.63 0.00 35.47 3.79
3915 4011 1.805945 GACCGGTGAGACGACATGC 60.806 63.158 14.63 0.00 35.47 4.06
3916 4012 0.732880 GTGACCGGTGAGACGACATG 60.733 60.000 14.63 0.00 35.47 3.21
3917 4013 1.176619 TGTGACCGGTGAGACGACAT 61.177 55.000 14.63 0.00 35.47 3.06
3918 4014 1.385756 TTGTGACCGGTGAGACGACA 61.386 55.000 14.63 0.00 35.47 4.35
3919 4015 0.938168 GTTGTGACCGGTGAGACGAC 60.938 60.000 14.63 12.16 35.47 4.34
3920 4016 1.361271 GTTGTGACCGGTGAGACGA 59.639 57.895 14.63 2.34 35.47 4.20
3921 4017 0.319555 ATGTTGTGACCGGTGAGACG 60.320 55.000 14.63 0.00 0.00 4.18
3922 4018 1.000955 AGATGTTGTGACCGGTGAGAC 59.999 52.381 14.63 6.13 0.00 3.36
3923 4019 1.000843 CAGATGTTGTGACCGGTGAGA 59.999 52.381 14.63 0.00 0.00 3.27
3924 4020 1.432514 CAGATGTTGTGACCGGTGAG 58.567 55.000 14.63 0.00 0.00 3.51
3925 4021 0.602638 GCAGATGTTGTGACCGGTGA 60.603 55.000 14.63 0.00 0.00 4.02
3926 4022 1.577328 GGCAGATGTTGTGACCGGTG 61.577 60.000 14.63 0.00 0.00 4.94
3927 4023 1.302511 GGCAGATGTTGTGACCGGT 60.303 57.895 6.92 6.92 0.00 5.28
3928 4024 0.677731 ATGGCAGATGTTGTGACCGG 60.678 55.000 0.00 0.00 0.00 5.28
3929 4025 0.729116 GATGGCAGATGTTGTGACCG 59.271 55.000 0.00 0.00 0.00 4.79
3930 4026 0.729116 CGATGGCAGATGTTGTGACC 59.271 55.000 0.00 0.00 0.00 4.02
3931 4027 1.394917 GACGATGGCAGATGTTGTGAC 59.605 52.381 0.00 0.00 0.00 3.67
3932 4028 1.001860 TGACGATGGCAGATGTTGTGA 59.998 47.619 0.00 0.00 0.00 3.58
3933 4029 1.441738 TGACGATGGCAGATGTTGTG 58.558 50.000 0.00 0.00 0.00 3.33
3934 4030 2.183478 TTGACGATGGCAGATGTTGT 57.817 45.000 0.00 0.00 0.00 3.32
3935 4031 2.286008 CGATTGACGATGGCAGATGTTG 60.286 50.000 0.00 0.00 45.77 3.33
3936 4032 1.935873 CGATTGACGATGGCAGATGTT 59.064 47.619 0.00 0.00 45.77 2.71
3937 4033 1.134699 ACGATTGACGATGGCAGATGT 60.135 47.619 0.00 0.00 45.77 3.06
3938 4034 1.575244 ACGATTGACGATGGCAGATG 58.425 50.000 0.00 0.00 45.77 2.90
3939 4035 2.864097 GCTACGATTGACGATGGCAGAT 60.864 50.000 0.00 0.00 45.77 2.90
3940 4036 1.536072 GCTACGATTGACGATGGCAGA 60.536 52.381 0.00 0.00 45.77 4.26
3941 4037 0.855349 GCTACGATTGACGATGGCAG 59.145 55.000 0.00 0.00 45.77 4.85
3942 4038 0.174617 TGCTACGATTGACGATGGCA 59.825 50.000 0.00 0.00 45.77 4.92
3943 4039 0.577269 GTGCTACGATTGACGATGGC 59.423 55.000 0.00 0.00 45.77 4.40
3944 4040 0.846401 CGTGCTACGATTGACGATGG 59.154 55.000 3.04 0.00 46.05 3.51
3945 4041 1.252779 CACGTGCTACGATTGACGATG 59.747 52.381 0.82 0.00 46.05 3.84
3946 4042 1.131693 TCACGTGCTACGATTGACGAT 59.868 47.619 11.67 0.00 46.05 3.73
3947 4043 0.518195 TCACGTGCTACGATTGACGA 59.482 50.000 11.67 0.00 46.05 4.20
3948 4044 0.633733 GTCACGTGCTACGATTGACG 59.366 55.000 11.67 1.82 46.05 4.35
3949 4045 0.989890 GGTCACGTGCTACGATTGAC 59.010 55.000 11.67 15.61 46.05 3.18
3950 4046 0.885879 AGGTCACGTGCTACGATTGA 59.114 50.000 11.67 6.75 46.05 2.57
3951 4047 1.269166 GAGGTCACGTGCTACGATTG 58.731 55.000 11.67 4.81 46.05 2.67
3952 4048 0.885879 TGAGGTCACGTGCTACGATT 59.114 50.000 11.67 0.00 46.05 3.34
3953 4049 0.170561 GTGAGGTCACGTGCTACGAT 59.829 55.000 11.67 0.00 46.05 3.73
3954 4050 1.577922 GTGAGGTCACGTGCTACGA 59.422 57.895 11.67 0.00 46.05 3.43
3968 4064 2.100631 GGATGTTGCGACCGGTGAG 61.101 63.158 14.63 7.14 0.00 3.51
3969 4065 2.047655 GGATGTTGCGACCGGTGA 60.048 61.111 14.63 0.00 0.00 4.02
3970 4066 3.487202 CGGATGTTGCGACCGGTG 61.487 66.667 14.63 5.62 42.48 4.94
3972 4068 2.971428 ATAGCGGATGTTGCGACCGG 62.971 60.000 0.00 0.00 45.66 5.28
3974 4070 0.304705 CAATAGCGGATGTTGCGACC 59.695 55.000 0.45 0.00 37.44 4.79
3975 4071 1.286501 TCAATAGCGGATGTTGCGAC 58.713 50.000 0.00 0.00 37.44 5.19
3976 4072 1.866601 CATCAATAGCGGATGTTGCGA 59.133 47.619 0.00 0.00 37.85 5.10
3977 4073 1.069703 CCATCAATAGCGGATGTTGCG 60.070 52.381 0.00 0.00 40.38 4.85
3978 4074 1.949525 ACCATCAATAGCGGATGTTGC 59.050 47.619 0.00 0.00 40.38 4.17
3979 4075 3.378112 ACAACCATCAATAGCGGATGTTG 59.622 43.478 0.00 0.00 40.38 3.33
3980 4076 3.620488 ACAACCATCAATAGCGGATGTT 58.380 40.909 0.00 0.00 40.38 2.71
3981 4077 3.281727 ACAACCATCAATAGCGGATGT 57.718 42.857 0.00 0.00 40.38 3.06
3982 4078 3.187227 GCTACAACCATCAATAGCGGATG 59.813 47.826 0.00 0.00 41.39 3.51
3983 4079 3.181455 TGCTACAACCATCAATAGCGGAT 60.181 43.478 0.00 0.00 42.44 4.18
3984 4080 2.169561 TGCTACAACCATCAATAGCGGA 59.830 45.455 0.00 0.00 42.44 5.54
3985 4081 2.560504 TGCTACAACCATCAATAGCGG 58.439 47.619 0.00 0.00 42.44 5.52
3986 4082 3.561310 ACATGCTACAACCATCAATAGCG 59.439 43.478 0.00 0.00 42.44 4.26
3987 4083 5.505173 AACATGCTACAACCATCAATAGC 57.495 39.130 0.00 0.00 40.40 2.97
3988 4084 7.712639 ACTCTAACATGCTACAACCATCAATAG 59.287 37.037 0.00 0.00 0.00 1.73
3989 4085 7.564793 ACTCTAACATGCTACAACCATCAATA 58.435 34.615 0.00 0.00 0.00 1.90
3990 4086 6.418101 ACTCTAACATGCTACAACCATCAAT 58.582 36.000 0.00 0.00 0.00 2.57
3991 4087 5.804639 ACTCTAACATGCTACAACCATCAA 58.195 37.500 0.00 0.00 0.00 2.57
3992 4088 5.420725 ACTCTAACATGCTACAACCATCA 57.579 39.130 0.00 0.00 0.00 3.07
3993 4089 5.459107 CGTACTCTAACATGCTACAACCATC 59.541 44.000 0.00 0.00 0.00 3.51
3994 4090 5.105473 ACGTACTCTAACATGCTACAACCAT 60.105 40.000 0.00 0.00 0.00 3.55
3995 4091 4.219070 ACGTACTCTAACATGCTACAACCA 59.781 41.667 0.00 0.00 0.00 3.67
3996 4092 4.741342 ACGTACTCTAACATGCTACAACC 58.259 43.478 0.00 0.00 0.00 3.77
3997 4093 7.043590 CCATTACGTACTCTAACATGCTACAAC 60.044 40.741 0.00 0.00 0.00 3.32
3998 4094 6.976349 CCATTACGTACTCTAACATGCTACAA 59.024 38.462 0.00 0.00 0.00 2.41
3999 4095 6.460537 CCCATTACGTACTCTAACATGCTACA 60.461 42.308 0.00 0.00 0.00 2.74
4000 4096 5.919141 CCCATTACGTACTCTAACATGCTAC 59.081 44.000 0.00 0.00 0.00 3.58
4001 4097 5.508489 GCCCATTACGTACTCTAACATGCTA 60.508 44.000 0.00 0.00 0.00 3.49
4002 4098 4.739735 GCCCATTACGTACTCTAACATGCT 60.740 45.833 0.00 0.00 0.00 3.79
4003 4099 3.493503 GCCCATTACGTACTCTAACATGC 59.506 47.826 0.00 0.00 0.00 4.06
4004 4100 4.056050 GGCCCATTACGTACTCTAACATG 58.944 47.826 0.00 0.00 0.00 3.21
4005 4101 3.965347 AGGCCCATTACGTACTCTAACAT 59.035 43.478 0.00 0.00 0.00 2.71
4006 4102 3.368248 AGGCCCATTACGTACTCTAACA 58.632 45.455 0.00 0.00 0.00 2.41
4007 4103 5.520376 TTAGGCCCATTACGTACTCTAAC 57.480 43.478 0.00 0.00 0.00 2.34
4008 4104 5.011329 CCATTAGGCCCATTACGTACTCTAA 59.989 44.000 0.00 0.00 0.00 2.10
4009 4105 4.525487 CCATTAGGCCCATTACGTACTCTA 59.475 45.833 0.00 0.00 0.00 2.43
4010 4106 3.323979 CCATTAGGCCCATTACGTACTCT 59.676 47.826 0.00 0.00 0.00 3.24
4011 4107 3.556423 CCCATTAGGCCCATTACGTACTC 60.556 52.174 0.00 0.00 0.00 2.59
4012 4108 2.370849 CCCATTAGGCCCATTACGTACT 59.629 50.000 0.00 0.00 0.00 2.73
4013 4109 2.774687 CCCATTAGGCCCATTACGTAC 58.225 52.381 0.00 0.00 0.00 3.67
4025 4121 2.196776 CAGCCCAGGCCCATTAGG 59.803 66.667 4.70 0.00 43.17 2.69
4026 4122 2.196776 CCAGCCCAGGCCCATTAG 59.803 66.667 4.70 0.00 43.17 1.73
4034 4130 4.473520 CTGTACCGCCAGCCCAGG 62.474 72.222 0.00 0.00 0.00 4.45
4045 4141 2.100418 CCTAAGACTAACGGGCTGTACC 59.900 54.545 0.00 0.00 30.75 3.34
4046 4142 2.100418 CCCTAAGACTAACGGGCTGTAC 59.900 54.545 0.00 0.00 30.75 2.90
4047 4143 2.291800 ACCCTAAGACTAACGGGCTGTA 60.292 50.000 0.00 0.00 40.45 2.74
4048 4144 1.192428 CCCTAAGACTAACGGGCTGT 58.808 55.000 0.00 0.00 30.75 4.40
4049 4145 1.192428 ACCCTAAGACTAACGGGCTG 58.808 55.000 0.00 0.00 40.45 4.85
4050 4146 1.948391 AACCCTAAGACTAACGGGCT 58.052 50.000 0.00 0.00 40.45 5.19
4051 4147 3.893326 TTAACCCTAAGACTAACGGGC 57.107 47.619 0.00 0.00 40.45 6.13
4052 4148 7.286316 TCTCTAATTAACCCTAAGACTAACGGG 59.714 40.741 0.00 0.00 42.53 5.28
4053 4149 8.230472 TCTCTAATTAACCCTAAGACTAACGG 57.770 38.462 0.00 0.00 0.00 4.44
4061 4157 9.694137 CGACCTTTATCTCTAATTAACCCTAAG 57.306 37.037 0.00 0.00 0.00 2.18
4062 4158 8.146412 GCGACCTTTATCTCTAATTAACCCTAA 58.854 37.037 0.00 0.00 0.00 2.69
4063 4159 7.508296 AGCGACCTTTATCTCTAATTAACCCTA 59.492 37.037 0.00 0.00 0.00 3.53
4064 4160 6.326843 AGCGACCTTTATCTCTAATTAACCCT 59.673 38.462 0.00 0.00 0.00 4.34
4065 4161 6.522946 AGCGACCTTTATCTCTAATTAACCC 58.477 40.000 0.00 0.00 0.00 4.11
4066 4162 7.518529 GCAAGCGACCTTTATCTCTAATTAACC 60.519 40.741 0.00 0.00 0.00 2.85
4067 4163 7.224949 AGCAAGCGACCTTTATCTCTAATTAAC 59.775 37.037 0.00 0.00 0.00 2.01
4068 4164 7.272978 AGCAAGCGACCTTTATCTCTAATTAA 58.727 34.615 0.00 0.00 0.00 1.40
4069 4165 6.817184 AGCAAGCGACCTTTATCTCTAATTA 58.183 36.000 0.00 0.00 0.00 1.40
4070 4166 5.675538 AGCAAGCGACCTTTATCTCTAATT 58.324 37.500 0.00 0.00 0.00 1.40
4071 4167 5.283457 AGCAAGCGACCTTTATCTCTAAT 57.717 39.130 0.00 0.00 0.00 1.73
4072 4168 4.737855 AGCAAGCGACCTTTATCTCTAA 57.262 40.909 0.00 0.00 0.00 2.10
4073 4169 4.737855 AAGCAAGCGACCTTTATCTCTA 57.262 40.909 0.00 0.00 0.00 2.43
4074 4170 3.618690 AAGCAAGCGACCTTTATCTCT 57.381 42.857 0.00 0.00 0.00 3.10
4075 4171 3.804873 CCTAAGCAAGCGACCTTTATCTC 59.195 47.826 0.00 0.00 0.00 2.75
4076 4172 3.432326 CCCTAAGCAAGCGACCTTTATCT 60.432 47.826 0.00 0.00 0.00 1.98
4077 4173 2.872858 CCCTAAGCAAGCGACCTTTATC 59.127 50.000 0.00 0.00 0.00 1.75
4078 4174 2.421529 CCCCTAAGCAAGCGACCTTTAT 60.422 50.000 0.00 0.00 0.00 1.40
4079 4175 1.065709 CCCCTAAGCAAGCGACCTTTA 60.066 52.381 0.00 0.00 0.00 1.85
4080 4176 0.322546 CCCCTAAGCAAGCGACCTTT 60.323 55.000 0.00 0.00 0.00 3.11
4081 4177 1.299976 CCCCTAAGCAAGCGACCTT 59.700 57.895 0.00 0.00 0.00 3.50
4082 4178 2.670148 CCCCCTAAGCAAGCGACCT 61.670 63.158 0.00 0.00 0.00 3.85
4083 4179 2.124695 CCCCCTAAGCAAGCGACC 60.125 66.667 0.00 0.00 0.00 4.79
4084 4180 1.449778 GACCCCCTAAGCAAGCGAC 60.450 63.158 0.00 0.00 0.00 5.19
4085 4181 1.485294 TTGACCCCCTAAGCAAGCGA 61.485 55.000 0.00 0.00 0.00 4.93
4086 4182 1.002624 TTGACCCCCTAAGCAAGCG 60.003 57.895 0.00 0.00 0.00 4.68
4087 4183 0.038310 ACTTGACCCCCTAAGCAAGC 59.962 55.000 0.00 0.00 40.94 4.01
4088 4184 3.610911 CTTACTTGACCCCCTAAGCAAG 58.389 50.000 0.00 0.00 42.46 4.01
4089 4185 2.290705 GCTTACTTGACCCCCTAAGCAA 60.291 50.000 0.00 0.00 40.48 3.91
4090 4186 1.280998 GCTTACTTGACCCCCTAAGCA 59.719 52.381 0.00 0.00 40.48 3.91
4091 4187 1.408405 GGCTTACTTGACCCCCTAAGC 60.408 57.143 0.00 0.00 40.19 3.09
4092 4188 2.197465 AGGCTTACTTGACCCCCTAAG 58.803 52.381 0.00 0.00 0.00 2.18
4093 4189 2.354261 AGGCTTACTTGACCCCCTAA 57.646 50.000 0.00 0.00 0.00 2.69
4094 4190 2.354261 AAGGCTTACTTGACCCCCTA 57.646 50.000 0.00 0.00 38.21 3.53
4095 4191 3.198784 AAGGCTTACTTGACCCCCT 57.801 52.632 0.00 0.00 38.21 4.79
4103 4199 0.329596 CTCCCAGGCAAGGCTTACTT 59.670 55.000 0.00 0.00 41.00 2.24
4104 4200 0.842467 ACTCCCAGGCAAGGCTTACT 60.842 55.000 0.00 0.00 0.00 2.24
4105 4201 0.393132 GACTCCCAGGCAAGGCTTAC 60.393 60.000 0.00 0.00 0.00 2.34
4106 4202 0.840288 TGACTCCCAGGCAAGGCTTA 60.840 55.000 0.00 0.00 23.92 3.09
4107 4203 1.719063 TTGACTCCCAGGCAAGGCTT 61.719 55.000 0.00 0.00 38.55 4.35
4108 4204 2.156098 TTGACTCCCAGGCAAGGCT 61.156 57.895 0.00 0.00 38.55 4.58
4109 4205 2.436109 TTGACTCCCAGGCAAGGC 59.564 61.111 0.00 0.00 38.55 4.35
4112 4208 2.488347 GGTTTACTTGACTCCCAGGCAA 60.488 50.000 0.00 0.00 41.84 4.52
4113 4209 1.073284 GGTTTACTTGACTCCCAGGCA 59.927 52.381 0.00 0.00 0.00 4.75
4114 4210 1.351350 AGGTTTACTTGACTCCCAGGC 59.649 52.381 0.00 0.00 0.00 4.85
4115 4211 2.907042 AGAGGTTTACTTGACTCCCAGG 59.093 50.000 0.00 0.00 0.00 4.45
4116 4212 3.835395 AGAGAGGTTTACTTGACTCCCAG 59.165 47.826 0.00 0.00 0.00 4.45
4117 4213 3.858135 AGAGAGGTTTACTTGACTCCCA 58.142 45.455 0.00 0.00 0.00 4.37
4118 4214 7.842887 ATATAGAGAGGTTTACTTGACTCCC 57.157 40.000 0.00 0.00 0.00 4.30
4134 4230 9.899661 GCTACATCTCCTCTCTTTATATAGAGA 57.100 37.037 18.39 18.39 46.35 3.10
4135 4231 9.679661 TGCTACATCTCCTCTCTTTATATAGAG 57.320 37.037 12.58 12.58 42.46 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.