Multiple sequence alignment - TraesCS5D01G128200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G128200 chr5D 100.000 3042 0 0 1 3042 200500057 200503098 0.000000e+00 5618.0
1 TraesCS5D01G128200 chr5D 86.567 134 18 0 1001 1134 425077485 425077352 6.800000e-32 148.0
2 TraesCS5D01G128200 chr5D 89.286 112 12 0 2890 3001 220544067 220544178 1.140000e-29 141.0
3 TraesCS5D01G128200 chr5D 85.185 135 18 2 1235 1368 425077353 425077220 1.470000e-28 137.0
4 TraesCS5D01G128200 chr5D 94.595 37 0 2 2758 2793 60522765 60522730 4.240000e-04 56.5
5 TraesCS5D01G128200 chr5D 94.444 36 2 0 2757 2792 432534431 432534396 4.240000e-04 56.5
6 TraesCS5D01G128200 chr5B 96.562 2007 48 10 618 2620 211145655 211147644 0.000000e+00 3304.0
7 TraesCS5D01G128200 chr5B 89.744 507 34 4 84 589 211145171 211145660 1.540000e-177 632.0
8 TraesCS5D01G128200 chr5B 86.567 134 18 0 1001 1134 514279627 514279494 6.800000e-32 148.0
9 TraesCS5D01G128200 chr5B 85.185 135 18 2 1235 1368 514279495 514279362 1.470000e-28 137.0
10 TraesCS5D01G128200 chr5B 95.522 67 2 1 1 67 211145111 211145176 4.150000e-19 106.0
11 TraesCS5D01G128200 chr5A 91.650 1988 87 42 1 1947 214165405 214167354 0.000000e+00 2678.0
12 TraesCS5D01G128200 chr5A 93.706 286 13 2 2312 2596 214167574 214167855 1.010000e-114 424.0
13 TraesCS5D01G128200 chr5A 85.973 221 20 8 1998 2212 214167355 214167570 3.050000e-55 226.0
14 TraesCS5D01G128200 chr4A 79.084 655 74 47 981 1615 517884367 517884978 2.840000e-105 392.0
15 TraesCS5D01G128200 chr4A 90.179 112 10 1 2890 3000 63615542 63615653 8.790000e-31 145.0
16 TraesCS5D01G128200 chr4B 78.717 639 89 36 993 1615 100576433 100577040 1.710000e-102 383.0
17 TraesCS5D01G128200 chr4B 91.589 107 9 0 2890 2996 463725319 463725425 6.800000e-32 148.0
18 TraesCS5D01G128200 chr4D 81.108 397 46 20 981 1369 68053173 68053548 1.070000e-74 291.0
19 TraesCS5D01G128200 chr4D 93.525 139 8 1 1477 1615 68053661 68053798 3.980000e-49 206.0
20 TraesCS5D01G128200 chr4D 87.129 101 13 0 2795 2895 240438766 240438666 6.890000e-22 115.0
21 TraesCS5D01G128200 chr4D 87.129 101 13 0 2795 2895 486727650 486727750 6.890000e-22 115.0
22 TraesCS5D01G128200 chr1D 91.339 127 11 0 1485 1611 364624919 364624793 1.120000e-39 174.0
23 TraesCS5D01G128200 chr1D 93.137 102 7 0 2895 2996 361035407 361035508 1.890000e-32 150.0
24 TraesCS5D01G128200 chr1D 88.119 101 12 0 2795 2895 348295778 348295678 1.480000e-23 121.0
25 TraesCS5D01G128200 chr1B 90.769 130 12 0 1482 1611 487951130 487951001 1.120000e-39 174.0
26 TraesCS5D01G128200 chr1A 90.551 127 12 0 1485 1611 463461337 463461211 5.220000e-38 169.0
27 TraesCS5D01G128200 chr1A 90.698 43 3 1 2764 2805 521672983 521673025 4.240000e-04 56.5
28 TraesCS5D01G128200 chr3D 85.714 147 21 0 1482 1628 492131786 492131932 4.060000e-34 156.0
29 TraesCS5D01G128200 chr3D 90.826 109 10 0 2890 2998 442969982 442969874 2.440000e-31 147.0
30 TraesCS5D01G128200 chr3D 89.109 101 11 0 2795 2895 401072506 401072406 3.180000e-25 126.0
31 TraesCS5D01G128200 chr3D 88.119 101 12 0 2795 2895 263508627 263508527 1.480000e-23 121.0
32 TraesCS5D01G128200 chr3D 87.129 101 13 0 2795 2895 60620746 60620646 6.890000e-22 115.0
33 TraesCS5D01G128200 chr3D 77.465 142 32 0 1234 1375 352367943 352367802 5.400000e-13 86.1
34 TraesCS5D01G128200 chr3A 86.957 138 17 1 988 1125 633922089 633922225 1.460000e-33 154.0
35 TraesCS5D01G128200 chr7A 93.204 103 7 0 2895 2997 344662243 344662141 5.250000e-33 152.0
36 TraesCS5D01G128200 chr2A 93.204 103 7 0 2895 2997 240440957 240440855 5.250000e-33 152.0
37 TraesCS5D01G128200 chr2A 97.059 34 0 1 2759 2792 757825555 757825587 4.240000e-04 56.5
38 TraesCS5D01G128200 chr6B 93.137 102 7 0 2895 2996 314444036 314444137 1.890000e-32 150.0
39 TraesCS5D01G128200 chr3B 87.218 133 16 1 993 1125 653152044 653152175 1.890000e-32 150.0
40 TraesCS5D01G128200 chr3B 91.589 107 9 0 2890 2996 646823478 646823584 6.800000e-32 148.0
41 TraesCS5D01G128200 chr3B 91.892 37 3 0 2756 2792 706775281 706775317 5.000000e-03 52.8
42 TraesCS5D01G128200 chr2D 88.119 101 12 0 2795 2895 398975003 398975103 1.480000e-23 121.0
43 TraesCS5D01G128200 chr2D 94.286 35 2 0 2758 2792 90712724 90712758 2.000000e-03 54.7
44 TraesCS5D01G128200 chr7B 87.500 104 12 1 2792 2895 87177419 87177521 5.330000e-23 119.0
45 TraesCS5D01G128200 chr7B 94.286 35 1 1 2758 2792 196713071 196713038 5.000000e-03 52.8
46 TraesCS5D01G128200 chr7D 86.538 104 14 0 2792 2895 528758568 528758671 6.890000e-22 115.0
47 TraesCS5D01G128200 chr7D 82.143 112 16 3 1231 1340 380145182 380145291 3.230000e-15 93.5
48 TraesCS5D01G128200 chr7D 97.297 37 0 1 2757 2792 592660657 592660693 9.110000e-06 62.1
49 TraesCS5D01G128200 chr7D 97.059 34 1 0 2759 2792 358677355 358677388 1.180000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G128200 chr5D 200500057 200503098 3041 False 5618.000000 5618 100.000000 1 3042 1 chr5D.!!$F1 3041
1 TraesCS5D01G128200 chr5B 211145111 211147644 2533 False 1347.333333 3304 93.942667 1 2620 3 chr5B.!!$F1 2619
2 TraesCS5D01G128200 chr5A 214165405 214167855 2450 False 1109.333333 2678 90.443000 1 2596 3 chr5A.!!$F1 2595
3 TraesCS5D01G128200 chr4A 517884367 517884978 611 False 392.000000 392 79.084000 981 1615 1 chr4A.!!$F2 634
4 TraesCS5D01G128200 chr4B 100576433 100577040 607 False 383.000000 383 78.717000 993 1615 1 chr4B.!!$F1 622
5 TraesCS5D01G128200 chr4D 68053173 68053798 625 False 248.500000 291 87.316500 981 1615 2 chr4D.!!$F2 634

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
916 937 1.00563 AGTCGTCACTTGGCTCTGC 60.006 57.895 0.0 0.0 0.0 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2850 2929 0.030297 AGGACATGGAGATGAGGCCT 60.03 55.0 3.86 3.86 33.36 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
115 127 9.046296 GCTAATCTACTAGCATGTGTATGTTTT 57.954 33.333 0.00 0.00 43.25 2.43
134 146 1.437089 CGTTGCAACGCACGAGAAG 60.437 57.895 35.89 9.83 46.06 2.85
276 288 1.348064 ATCGTCCACCTTGTCCTTCA 58.652 50.000 0.00 0.00 0.00 3.02
293 305 4.021916 CCTTCATCCAGCATTCCTCTTTT 58.978 43.478 0.00 0.00 0.00 2.27
304 316 4.826556 CATTCCTCTTTTCCTCTCGTCTT 58.173 43.478 0.00 0.00 0.00 3.01
310 322 7.450903 TCCTCTTTTCCTCTCGTCTTTTATTT 58.549 34.615 0.00 0.00 0.00 1.40
311 323 7.387948 TCCTCTTTTCCTCTCGTCTTTTATTTG 59.612 37.037 0.00 0.00 0.00 2.32
426 439 9.581099 AATCACGGGTTTGATAAACAATTATTC 57.419 29.630 6.74 0.00 43.15 1.75
496 510 2.121291 TTGACACAGGTTGCAAGTGA 57.879 45.000 20.46 0.00 37.05 3.41
497 511 1.667236 TGACACAGGTTGCAAGTGAG 58.333 50.000 20.46 12.75 37.05 3.51
498 512 1.209261 TGACACAGGTTGCAAGTGAGA 59.791 47.619 20.46 6.62 37.05 3.27
499 513 2.288666 GACACAGGTTGCAAGTGAGAA 58.711 47.619 20.46 0.00 37.05 2.87
500 514 2.880890 GACACAGGTTGCAAGTGAGAAT 59.119 45.455 20.46 1.94 37.05 2.40
501 515 4.065088 GACACAGGTTGCAAGTGAGAATA 58.935 43.478 20.46 0.00 37.05 1.75
502 516 4.067896 ACACAGGTTGCAAGTGAGAATAG 58.932 43.478 20.46 0.20 37.05 1.73
503 517 4.067896 CACAGGTTGCAAGTGAGAATAGT 58.932 43.478 14.29 0.00 35.33 2.12
504 518 4.153117 CACAGGTTGCAAGTGAGAATAGTC 59.847 45.833 14.29 0.00 35.33 2.59
505 519 4.202357 ACAGGTTGCAAGTGAGAATAGTCA 60.202 41.667 14.29 0.00 0.00 3.41
506 520 4.756642 CAGGTTGCAAGTGAGAATAGTCAA 59.243 41.667 0.00 0.00 0.00 3.18
507 521 4.999950 AGGTTGCAAGTGAGAATAGTCAAG 59.000 41.667 0.00 0.00 0.00 3.02
508 522 4.757149 GGTTGCAAGTGAGAATAGTCAAGT 59.243 41.667 0.00 0.00 0.00 3.16
509 523 5.334414 GGTTGCAAGTGAGAATAGTCAAGTG 60.334 44.000 0.00 0.00 0.00 3.16
868 884 2.632996 TCCTTCTCCGCCACCATATAAG 59.367 50.000 0.00 0.00 0.00 1.73
876 893 1.941668 GCCACCATATAAGCGCCTCTC 60.942 57.143 2.29 0.00 0.00 3.20
890 907 1.412937 GCCTCTCTCCTCCCTGAGATT 60.413 57.143 0.00 0.00 40.47 2.40
895 912 4.947883 TCTCTCCTCCCTGAGATTAAACA 58.052 43.478 0.00 0.00 40.47 2.83
916 937 1.005630 AGTCGTCACTTGGCTCTGC 60.006 57.895 0.00 0.00 0.00 4.26
920 941 2.029844 GTCACTTGGCTCTGCGTCC 61.030 63.158 0.00 0.00 0.00 4.79
930 951 3.062466 CTGCGTCCGTCTCCTCCA 61.062 66.667 0.00 0.00 0.00 3.86
949 1000 2.552315 CCAGCTACTTCTCCGATCTCTC 59.448 54.545 0.00 0.00 0.00 3.20
950 1001 3.476552 CAGCTACTTCTCCGATCTCTCT 58.523 50.000 0.00 0.00 0.00 3.10
951 1002 3.498397 CAGCTACTTCTCCGATCTCTCTC 59.502 52.174 0.00 0.00 0.00 3.20
952 1003 3.391296 AGCTACTTCTCCGATCTCTCTCT 59.609 47.826 0.00 0.00 0.00 3.10
953 1004 3.746492 GCTACTTCTCCGATCTCTCTCTC 59.254 52.174 0.00 0.00 0.00 3.20
954 1005 4.503296 GCTACTTCTCCGATCTCTCTCTCT 60.503 50.000 0.00 0.00 0.00 3.10
955 1006 4.073293 ACTTCTCCGATCTCTCTCTCTC 57.927 50.000 0.00 0.00 0.00 3.20
956 1007 3.181454 ACTTCTCCGATCTCTCTCTCTCC 60.181 52.174 0.00 0.00 0.00 3.71
1146 1197 2.093447 AGCAGCAGGTACAACATACTCC 60.093 50.000 0.00 0.00 0.00 3.85
1441 1499 0.179059 TGTGCCGGATGCGATGTAAT 60.179 50.000 8.71 0.00 45.60 1.89
1954 2026 2.280797 TGCAGCTGTGTCGGTTCC 60.281 61.111 16.64 0.00 0.00 3.62
2066 2141 6.483385 TTAGAGACCGAGATATTAGCTTCG 57.517 41.667 0.00 0.00 0.00 3.79
2101 2176 7.661040 AGCTCAGATTAATTAGAGAGAGAAGC 58.339 38.462 17.42 5.64 0.00 3.86
2103 2178 6.442952 TCAGATTAATTAGAGAGAGAAGCGC 58.557 40.000 0.00 0.00 0.00 5.92
2203 2279 5.070981 CCTTCATTCTCTAATGCCTGGTCTA 59.929 44.000 0.00 0.00 41.96 2.59
2284 2360 9.582431 CTCGACATAAAATTGAGTAGGAGTAAA 57.418 33.333 0.00 0.00 0.00 2.01
2285 2361 9.932207 TCGACATAAAATTGAGTAGGAGTAAAA 57.068 29.630 0.00 0.00 0.00 1.52
2355 2431 2.628178 TCATGTTCCAGACCGGCTATAG 59.372 50.000 0.00 0.00 33.14 1.31
2403 2479 1.669604 TTGTCGTGCTGCTGGTTTTA 58.330 45.000 0.00 0.00 0.00 1.52
2487 2564 5.636903 AGCTATGGTGGTGAAGTCATATT 57.363 39.130 0.00 0.00 0.00 1.28
2586 2663 1.153628 CCGTAACCTTCTCCAGCCG 60.154 63.158 0.00 0.00 0.00 5.52
2596 2673 4.947147 TCCAGCCGGCGCTTTGTT 62.947 61.111 23.20 0.00 45.55 2.83
2615 2694 7.201384 GCTTTGTTACGAATGTAGTGTAGGTAC 60.201 40.741 0.00 0.00 0.00 3.34
2620 2699 9.840427 GTTACGAATGTAGTGTAGGTACTAAAA 57.160 33.333 0.00 0.00 45.48 1.52
2623 2702 9.362539 ACGAATGTAGTGTAGGTACTAAAATTG 57.637 33.333 0.00 0.00 45.48 2.32
2624 2703 8.814235 CGAATGTAGTGTAGGTACTAAAATTGG 58.186 37.037 0.00 0.00 45.48 3.16
2625 2704 9.106070 GAATGTAGTGTAGGTACTAAAATTGGG 57.894 37.037 0.00 0.00 45.48 4.12
2626 2705 7.795534 TGTAGTGTAGGTACTAAAATTGGGA 57.204 36.000 0.00 0.00 45.48 4.37
2627 2706 7.614494 TGTAGTGTAGGTACTAAAATTGGGAC 58.386 38.462 0.00 0.00 45.48 4.46
2628 2707 6.691255 AGTGTAGGTACTAAAATTGGGACA 57.309 37.500 0.00 0.00 45.48 4.02
2629 2708 7.266905 AGTGTAGGTACTAAAATTGGGACAT 57.733 36.000 0.00 0.00 45.48 3.06
2630 2709 7.696017 AGTGTAGGTACTAAAATTGGGACATT 58.304 34.615 0.00 0.00 45.48 2.71
2631 2710 8.168058 AGTGTAGGTACTAAAATTGGGACATTT 58.832 33.333 0.00 0.00 45.48 2.32
2632 2711 9.452287 GTGTAGGTACTAAAATTGGGACATTTA 57.548 33.333 0.00 0.00 45.48 1.40
2642 2721 8.996024 AAAATTGGGACATTTATTTTAGGACG 57.004 30.769 0.00 0.00 35.37 4.79
2643 2722 6.709018 ATTGGGACATTTATTTTAGGACGG 57.291 37.500 0.00 0.00 39.30 4.79
2644 2723 5.438698 TGGGACATTTATTTTAGGACGGA 57.561 39.130 0.00 0.00 0.00 4.69
2645 2724 6.008696 TGGGACATTTATTTTAGGACGGAT 57.991 37.500 0.00 0.00 0.00 4.18
2646 2725 5.825679 TGGGACATTTATTTTAGGACGGATG 59.174 40.000 0.00 0.00 0.00 3.51
2647 2726 6.059484 GGGACATTTATTTTAGGACGGATGA 58.941 40.000 0.00 0.00 0.00 2.92
2648 2727 6.544564 GGGACATTTATTTTAGGACGGATGAA 59.455 38.462 0.00 0.00 0.00 2.57
2649 2728 7.255139 GGGACATTTATTTTAGGACGGATGAAG 60.255 40.741 0.00 0.00 0.00 3.02
2650 2729 7.282450 GGACATTTATTTTAGGACGGATGAAGT 59.718 37.037 0.00 0.00 0.00 3.01
2651 2730 9.321562 GACATTTATTTTAGGACGGATGAAGTA 57.678 33.333 0.00 0.00 0.00 2.24
2652 2731 9.326413 ACATTTATTTTAGGACGGATGAAGTAG 57.674 33.333 0.00 0.00 0.00 2.57
2653 2732 9.326413 CATTTATTTTAGGACGGATGAAGTAGT 57.674 33.333 0.00 0.00 0.00 2.73
2655 2734 9.807649 TTTATTTTAGGACGGATGAAGTAGTAC 57.192 33.333 0.00 0.00 0.00 2.73
2656 2735 6.839124 TTTTAGGACGGATGAAGTAGTACA 57.161 37.500 2.52 0.00 0.00 2.90
2657 2736 7.414222 TTTTAGGACGGATGAAGTAGTACAT 57.586 36.000 2.52 0.00 0.00 2.29
2658 2737 8.523915 TTTTAGGACGGATGAAGTAGTACATA 57.476 34.615 2.52 0.00 0.00 2.29
2659 2738 8.523915 TTTAGGACGGATGAAGTAGTACATAA 57.476 34.615 2.52 0.00 0.00 1.90
2660 2739 8.523915 TTAGGACGGATGAAGTAGTACATAAA 57.476 34.615 2.52 0.00 0.00 1.40
2661 2740 7.414222 AGGACGGATGAAGTAGTACATAAAA 57.586 36.000 2.52 0.00 0.00 1.52
2662 2741 7.844009 AGGACGGATGAAGTAGTACATAAAAA 58.156 34.615 2.52 0.00 0.00 1.94
2663 2742 8.483758 AGGACGGATGAAGTAGTACATAAAAAT 58.516 33.333 2.52 0.00 0.00 1.82
2664 2743 8.548721 GGACGGATGAAGTAGTACATAAAAATG 58.451 37.037 2.52 0.00 0.00 2.32
2665 2744 7.916552 ACGGATGAAGTAGTACATAAAAATGC 58.083 34.615 2.52 0.00 0.00 3.56
2666 2745 7.551262 ACGGATGAAGTAGTACATAAAAATGCA 59.449 33.333 2.52 0.00 0.00 3.96
2667 2746 7.850982 CGGATGAAGTAGTACATAAAAATGCAC 59.149 37.037 2.52 0.00 0.00 4.57
2668 2747 8.129211 GGATGAAGTAGTACATAAAAATGCACC 58.871 37.037 2.52 0.00 0.00 5.01
2669 2748 8.807948 ATGAAGTAGTACATAAAAATGCACCT 57.192 30.769 2.52 0.00 0.00 4.00
2670 2749 8.630054 TGAAGTAGTACATAAAAATGCACCTT 57.370 30.769 2.52 0.00 0.00 3.50
2671 2750 9.727859 TGAAGTAGTACATAAAAATGCACCTTA 57.272 29.630 2.52 0.00 0.00 2.69
2713 2792 9.631452 AGAAAAGAGCAAATATTGTTTAGAAGC 57.369 29.630 0.00 0.00 0.00 3.86
2714 2793 9.410556 GAAAAGAGCAAATATTGTTTAGAAGCA 57.589 29.630 0.00 0.00 0.00 3.91
2715 2794 9.762933 AAAAGAGCAAATATTGTTTAGAAGCAA 57.237 25.926 0.00 0.00 33.67 3.91
2716 2795 8.976986 AAGAGCAAATATTGTTTAGAAGCAAG 57.023 30.769 0.00 0.00 32.66 4.01
2717 2796 8.340618 AGAGCAAATATTGTTTAGAAGCAAGA 57.659 30.769 0.00 0.00 32.66 3.02
2718 2797 8.239998 AGAGCAAATATTGTTTAGAAGCAAGAC 58.760 33.333 0.00 0.00 32.66 3.01
2719 2798 7.023575 AGCAAATATTGTTTAGAAGCAAGACG 58.976 34.615 0.00 0.00 32.66 4.18
2720 2799 6.801862 GCAAATATTGTTTAGAAGCAAGACGT 59.198 34.615 0.00 0.00 32.66 4.34
2721 2800 7.201266 GCAAATATTGTTTAGAAGCAAGACGTG 60.201 37.037 0.00 0.00 32.66 4.49
2722 2801 7.667043 AATATTGTTTAGAAGCAAGACGTGA 57.333 32.000 0.00 0.00 32.66 4.35
2723 2802 7.667043 ATATTGTTTAGAAGCAAGACGTGAA 57.333 32.000 0.00 0.00 32.66 3.18
2724 2803 4.789095 TGTTTAGAAGCAAGACGTGAAC 57.211 40.909 0.00 0.00 0.00 3.18
2725 2804 4.185394 TGTTTAGAAGCAAGACGTGAACA 58.815 39.130 0.00 0.00 0.00 3.18
2726 2805 4.814234 TGTTTAGAAGCAAGACGTGAACAT 59.186 37.500 0.00 0.00 0.00 2.71
2727 2806 5.050363 TGTTTAGAAGCAAGACGTGAACATC 60.050 40.000 0.00 0.00 0.00 3.06
2728 2807 3.111853 AGAAGCAAGACGTGAACATCA 57.888 42.857 0.00 0.00 0.00 3.07
2729 2808 3.668447 AGAAGCAAGACGTGAACATCAT 58.332 40.909 0.00 0.00 0.00 2.45
2730 2809 3.681897 AGAAGCAAGACGTGAACATCATC 59.318 43.478 0.00 0.00 0.00 2.92
2731 2810 1.995484 AGCAAGACGTGAACATCATCG 59.005 47.619 0.00 0.00 0.00 3.84
2732 2811 1.726791 GCAAGACGTGAACATCATCGT 59.273 47.619 0.00 7.39 37.04 3.73
2733 2812 2.921121 GCAAGACGTGAACATCATCGTA 59.079 45.455 0.00 0.00 35.48 3.43
2734 2813 3.000674 GCAAGACGTGAACATCATCGTAG 60.001 47.826 0.00 4.26 35.48 3.51
2735 2814 3.422417 AGACGTGAACATCATCGTAGG 57.578 47.619 0.00 0.00 35.48 3.18
2736 2815 2.753452 AGACGTGAACATCATCGTAGGT 59.247 45.455 0.00 0.00 35.48 3.08
2737 2816 3.943381 AGACGTGAACATCATCGTAGGTA 59.057 43.478 0.00 0.00 35.48 3.08
2738 2817 4.025015 ACGTGAACATCATCGTAGGTAC 57.975 45.455 0.00 0.00 34.31 3.34
2747 2826 2.803479 CGTAGGTACGCCCACTCC 59.197 66.667 0.00 0.00 43.14 3.85
2748 2827 2.048023 CGTAGGTACGCCCACTCCA 61.048 63.158 0.00 0.00 43.14 3.86
2749 2828 1.514553 GTAGGTACGCCCACTCCAC 59.485 63.158 0.00 0.00 34.66 4.02
2750 2829 1.077086 TAGGTACGCCCACTCCACA 59.923 57.895 0.00 0.00 34.66 4.17
2751 2830 0.324923 TAGGTACGCCCACTCCACAT 60.325 55.000 0.00 0.00 34.66 3.21
2752 2831 0.324923 AGGTACGCCCACTCCACATA 60.325 55.000 0.00 0.00 34.66 2.29
2753 2832 0.538118 GGTACGCCCACTCCACATAA 59.462 55.000 0.00 0.00 0.00 1.90
2754 2833 1.140252 GGTACGCCCACTCCACATAAT 59.860 52.381 0.00 0.00 0.00 1.28
2755 2834 2.210116 GTACGCCCACTCCACATAATG 58.790 52.381 0.00 0.00 0.00 1.90
2756 2835 0.748005 ACGCCCACTCCACATAATGC 60.748 55.000 0.00 0.00 0.00 3.56
2757 2836 0.464373 CGCCCACTCCACATAATGCT 60.464 55.000 0.00 0.00 0.00 3.79
2758 2837 1.202639 CGCCCACTCCACATAATGCTA 60.203 52.381 0.00 0.00 0.00 3.49
2759 2838 2.744823 CGCCCACTCCACATAATGCTAA 60.745 50.000 0.00 0.00 0.00 3.09
2760 2839 2.618709 GCCCACTCCACATAATGCTAAC 59.381 50.000 0.00 0.00 0.00 2.34
2761 2840 3.685550 GCCCACTCCACATAATGCTAACT 60.686 47.826 0.00 0.00 0.00 2.24
2762 2841 4.444306 GCCCACTCCACATAATGCTAACTA 60.444 45.833 0.00 0.00 0.00 2.24
2763 2842 5.057149 CCCACTCCACATAATGCTAACTAC 58.943 45.833 0.00 0.00 0.00 2.73
2764 2843 4.745125 CCACTCCACATAATGCTAACTACG 59.255 45.833 0.00 0.00 0.00 3.51
2765 2844 5.348986 CACTCCACATAATGCTAACTACGT 58.651 41.667 0.00 0.00 0.00 3.57
2766 2845 6.460537 CCACTCCACATAATGCTAACTACGTA 60.461 42.308 0.00 0.00 0.00 3.57
2767 2846 6.417044 CACTCCACATAATGCTAACTACGTAC 59.583 42.308 0.00 0.00 0.00 3.67
2768 2847 6.320672 ACTCCACATAATGCTAACTACGTACT 59.679 38.462 0.00 0.00 0.00 2.73
2769 2848 6.732154 TCCACATAATGCTAACTACGTACTC 58.268 40.000 0.00 0.00 0.00 2.59
2770 2849 5.919141 CCACATAATGCTAACTACGTACTCC 59.081 44.000 0.00 0.00 0.00 3.85
2771 2850 5.919141 CACATAATGCTAACTACGTACTCCC 59.081 44.000 0.00 0.00 0.00 4.30
2772 2851 5.832060 ACATAATGCTAACTACGTACTCCCT 59.168 40.000 0.00 0.00 0.00 4.20
2773 2852 4.915158 AATGCTAACTACGTACTCCCTC 57.085 45.455 0.00 0.00 0.00 4.30
2774 2853 2.648059 TGCTAACTACGTACTCCCTCC 58.352 52.381 0.00 0.00 0.00 4.30
2775 2854 1.601430 GCTAACTACGTACTCCCTCCG 59.399 57.143 0.00 0.00 0.00 4.63
2776 2855 2.911484 CTAACTACGTACTCCCTCCGT 58.089 52.381 0.00 0.00 38.53 4.69
2777 2856 1.743996 AACTACGTACTCCCTCCGTC 58.256 55.000 0.00 0.00 36.12 4.79
2778 2857 0.107459 ACTACGTACTCCCTCCGTCC 60.107 60.000 0.00 0.00 36.12 4.79
2779 2858 1.153369 TACGTACTCCCTCCGTCCG 60.153 63.158 0.00 0.00 36.12 4.79
2780 2859 3.885521 CGTACTCCCTCCGTCCGC 61.886 72.222 0.00 0.00 0.00 5.54
2781 2860 3.885521 GTACTCCCTCCGTCCGCG 61.886 72.222 0.00 0.00 37.95 6.46
2782 2861 4.100084 TACTCCCTCCGTCCGCGA 62.100 66.667 8.23 0.00 41.33 5.87
2783 2862 3.626996 TACTCCCTCCGTCCGCGAA 62.627 63.158 8.23 0.00 41.33 4.70
2784 2863 2.898920 TACTCCCTCCGTCCGCGAAT 62.899 60.000 8.23 0.00 41.33 3.34
2785 2864 2.124193 TCCCTCCGTCCGCGAATA 60.124 61.111 8.23 0.00 41.33 1.75
2786 2865 1.731433 CTCCCTCCGTCCGCGAATAA 61.731 60.000 8.23 0.00 41.33 1.40
2787 2866 1.299926 CCCTCCGTCCGCGAATAAG 60.300 63.158 8.23 0.00 41.33 1.73
2788 2867 1.436336 CCTCCGTCCGCGAATAAGT 59.564 57.895 8.23 0.00 41.33 2.24
2789 2868 0.870307 CCTCCGTCCGCGAATAAGTG 60.870 60.000 8.23 0.00 41.33 3.16
2790 2869 0.179145 CTCCGTCCGCGAATAAGTGT 60.179 55.000 8.23 0.00 41.33 3.55
2791 2870 1.064505 CTCCGTCCGCGAATAAGTGTA 59.935 52.381 8.23 0.00 41.33 2.90
2792 2871 1.677576 TCCGTCCGCGAATAAGTGTAT 59.322 47.619 8.23 0.00 41.33 2.29
2793 2872 1.784856 CCGTCCGCGAATAAGTGTATG 59.215 52.381 8.23 0.00 41.33 2.39
2794 2873 1.189446 CGTCCGCGAATAAGTGTATGC 59.811 52.381 8.23 0.00 41.33 3.14
2795 2874 2.470821 GTCCGCGAATAAGTGTATGCT 58.529 47.619 8.23 0.00 0.00 3.79
2796 2875 2.471743 GTCCGCGAATAAGTGTATGCTC 59.528 50.000 8.23 0.00 0.00 4.26
2797 2876 1.792949 CCGCGAATAAGTGTATGCTCC 59.207 52.381 8.23 0.00 0.00 4.70
2798 2877 1.792949 CGCGAATAAGTGTATGCTCCC 59.207 52.381 0.00 0.00 0.00 4.30
2799 2878 2.545952 CGCGAATAAGTGTATGCTCCCT 60.546 50.000 0.00 0.00 0.00 4.20
2800 2879 3.060602 GCGAATAAGTGTATGCTCCCTC 58.939 50.000 0.00 0.00 0.00 4.30
2801 2880 3.243907 GCGAATAAGTGTATGCTCCCTCT 60.244 47.826 0.00 0.00 0.00 3.69
2802 2881 4.740934 GCGAATAAGTGTATGCTCCCTCTT 60.741 45.833 0.00 0.00 0.00 2.85
2803 2882 5.509163 GCGAATAAGTGTATGCTCCCTCTTA 60.509 44.000 0.00 0.00 0.00 2.10
2804 2883 6.692486 CGAATAAGTGTATGCTCCCTCTTAT 58.308 40.000 0.00 0.00 32.02 1.73
2805 2884 7.155328 CGAATAAGTGTATGCTCCCTCTTATT 58.845 38.462 12.64 12.64 39.30 1.40
2806 2885 7.329717 CGAATAAGTGTATGCTCCCTCTTATTC 59.670 40.741 20.57 20.57 43.60 1.75
2807 2886 4.592485 AGTGTATGCTCCCTCTTATTCG 57.408 45.455 0.00 0.00 0.00 3.34
2808 2887 3.322254 AGTGTATGCTCCCTCTTATTCGG 59.678 47.826 0.00 0.00 0.00 4.30
2809 2888 3.069729 GTGTATGCTCCCTCTTATTCGGT 59.930 47.826 0.00 0.00 0.00 4.69
2810 2889 3.709653 TGTATGCTCCCTCTTATTCGGTT 59.290 43.478 0.00 0.00 0.00 4.44
2811 2890 3.933861 ATGCTCCCTCTTATTCGGTTT 57.066 42.857 0.00 0.00 0.00 3.27
2812 2891 5.364446 TGTATGCTCCCTCTTATTCGGTTTA 59.636 40.000 0.00 0.00 0.00 2.01
2813 2892 5.568620 ATGCTCCCTCTTATTCGGTTTAT 57.431 39.130 0.00 0.00 0.00 1.40
2814 2893 6.681729 ATGCTCCCTCTTATTCGGTTTATA 57.318 37.500 0.00 0.00 0.00 0.98
2815 2894 6.097915 TGCTCCCTCTTATTCGGTTTATAG 57.902 41.667 0.00 0.00 0.00 1.31
2816 2895 5.011738 TGCTCCCTCTTATTCGGTTTATAGG 59.988 44.000 0.00 0.00 0.00 2.57
2817 2896 5.569026 GCTCCCTCTTATTCGGTTTATAGGG 60.569 48.000 0.00 0.00 43.23 3.53
2818 2897 4.285260 TCCCTCTTATTCGGTTTATAGGGC 59.715 45.833 0.00 0.00 41.88 5.19
2819 2898 4.286291 CCCTCTTATTCGGTTTATAGGGCT 59.714 45.833 0.00 0.00 36.30 5.19
2820 2899 5.221864 CCCTCTTATTCGGTTTATAGGGCTT 60.222 44.000 0.00 0.00 36.30 4.35
2821 2900 6.013984 CCCTCTTATTCGGTTTATAGGGCTTA 60.014 42.308 0.00 0.00 36.30 3.09
2822 2901 7.311109 CCCTCTTATTCGGTTTATAGGGCTTAT 60.311 40.741 0.00 0.00 36.30 1.73
2823 2902 7.764901 CCTCTTATTCGGTTTATAGGGCTTATC 59.235 40.741 0.00 0.00 0.00 1.75
2824 2903 8.431910 TCTTATTCGGTTTATAGGGCTTATCT 57.568 34.615 0.00 0.00 0.00 1.98
2825 2904 8.877195 TCTTATTCGGTTTATAGGGCTTATCTT 58.123 33.333 0.00 0.00 0.00 2.40
2830 2909 9.856162 TTCGGTTTATAGGGCTTATCTTAATTT 57.144 29.630 0.00 0.00 0.00 1.82
2831 2910 9.856162 TCGGTTTATAGGGCTTATCTTAATTTT 57.144 29.630 0.00 0.00 0.00 1.82
2854 2933 6.606234 TTTCGTTTTTCCAATTTAAAGGCC 57.394 33.333 0.00 0.00 0.00 5.19
2855 2934 5.538849 TCGTTTTTCCAATTTAAAGGCCT 57.461 34.783 0.00 0.00 0.00 5.19
2856 2935 5.534407 TCGTTTTTCCAATTTAAAGGCCTC 58.466 37.500 5.23 0.00 0.00 4.70
2857 2936 5.069251 TCGTTTTTCCAATTTAAAGGCCTCA 59.931 36.000 5.23 0.00 0.00 3.86
2858 2937 5.931724 CGTTTTTCCAATTTAAAGGCCTCAT 59.068 36.000 5.23 0.00 0.00 2.90
2859 2938 6.090763 CGTTTTTCCAATTTAAAGGCCTCATC 59.909 38.462 5.23 0.00 0.00 2.92
2860 2939 6.933514 TTTTCCAATTTAAAGGCCTCATCT 57.066 33.333 5.23 0.00 0.00 2.90
2861 2940 6.530019 TTTCCAATTTAAAGGCCTCATCTC 57.470 37.500 5.23 0.00 0.00 2.75
2862 2941 4.536765 TCCAATTTAAAGGCCTCATCTCC 58.463 43.478 5.23 0.00 0.00 3.71
2863 2942 4.017591 TCCAATTTAAAGGCCTCATCTCCA 60.018 41.667 5.23 0.00 0.00 3.86
2864 2943 4.897670 CCAATTTAAAGGCCTCATCTCCAT 59.102 41.667 5.23 0.00 0.00 3.41
2865 2944 5.221382 CCAATTTAAAGGCCTCATCTCCATG 60.221 44.000 5.23 0.00 0.00 3.66
2866 2945 4.591321 TTTAAAGGCCTCATCTCCATGT 57.409 40.909 5.23 0.00 0.00 3.21
2867 2946 2.725221 AAAGGCCTCATCTCCATGTC 57.275 50.000 5.23 0.00 0.00 3.06
2868 2947 0.842635 AAGGCCTCATCTCCATGTCC 59.157 55.000 5.23 0.00 0.00 4.02
2869 2948 0.030297 AGGCCTCATCTCCATGTCCT 60.030 55.000 0.00 0.00 0.00 3.85
2870 2949 1.221523 AGGCCTCATCTCCATGTCCTA 59.778 52.381 0.00 0.00 0.00 2.94
2871 2950 2.158035 AGGCCTCATCTCCATGTCCTAT 60.158 50.000 0.00 0.00 0.00 2.57
2872 2951 2.641815 GGCCTCATCTCCATGTCCTATT 59.358 50.000 0.00 0.00 0.00 1.73
2873 2952 3.558746 GGCCTCATCTCCATGTCCTATTG 60.559 52.174 0.00 0.00 0.00 1.90
2874 2953 3.326006 GCCTCATCTCCATGTCCTATTGA 59.674 47.826 0.00 0.00 0.00 2.57
2875 2954 4.563168 GCCTCATCTCCATGTCCTATTGAG 60.563 50.000 0.00 0.00 0.00 3.02
2876 2955 4.837298 CCTCATCTCCATGTCCTATTGAGA 59.163 45.833 0.00 4.31 36.59 3.27
2877 2956 5.484644 CCTCATCTCCATGTCCTATTGAGAT 59.515 44.000 3.40 3.40 42.05 2.75
2878 2957 6.013553 CCTCATCTCCATGTCCTATTGAGATT 60.014 42.308 5.85 0.00 39.99 2.40
2879 2958 7.002250 TCATCTCCATGTCCTATTGAGATTC 57.998 40.000 5.85 0.00 39.99 2.52
2880 2959 5.815233 TCTCCATGTCCTATTGAGATTCC 57.185 43.478 0.00 0.00 0.00 3.01
2881 2960 4.281941 TCTCCATGTCCTATTGAGATTCCG 59.718 45.833 0.00 0.00 0.00 4.30
2882 2961 4.223144 TCCATGTCCTATTGAGATTCCGA 58.777 43.478 0.00 0.00 0.00 4.55
2883 2962 4.281941 TCCATGTCCTATTGAGATTCCGAG 59.718 45.833 0.00 0.00 0.00 4.63
2884 2963 4.562347 CCATGTCCTATTGAGATTCCGAGG 60.562 50.000 0.00 0.00 0.00 4.63
2885 2964 2.365617 TGTCCTATTGAGATTCCGAGGC 59.634 50.000 0.00 0.00 0.00 4.70
2886 2965 1.613925 TCCTATTGAGATTCCGAGGCG 59.386 52.381 0.00 0.00 0.00 5.52
2887 2966 1.423395 CTATTGAGATTCCGAGGCGC 58.577 55.000 0.00 0.00 0.00 6.53
2888 2967 0.750249 TATTGAGATTCCGAGGCGCA 59.250 50.000 10.83 0.00 0.00 6.09
2889 2968 0.107456 ATTGAGATTCCGAGGCGCAT 59.893 50.000 10.83 0.00 0.00 4.73
2890 2969 0.107703 TTGAGATTCCGAGGCGCATT 60.108 50.000 10.83 0.00 0.00 3.56
2891 2970 0.750249 TGAGATTCCGAGGCGCATTA 59.250 50.000 10.83 0.00 0.00 1.90
2892 2971 1.138069 TGAGATTCCGAGGCGCATTAA 59.862 47.619 10.83 0.00 0.00 1.40
2893 2972 2.210116 GAGATTCCGAGGCGCATTAAA 58.790 47.619 10.83 0.00 0.00 1.52
2894 2973 2.808543 GAGATTCCGAGGCGCATTAAAT 59.191 45.455 10.83 3.28 0.00 1.40
2895 2974 3.214328 AGATTCCGAGGCGCATTAAATT 58.786 40.909 10.83 0.00 0.00 1.82
2896 2975 2.842208 TTCCGAGGCGCATTAAATTG 57.158 45.000 10.83 0.00 0.00 2.32
2897 2976 1.021202 TCCGAGGCGCATTAAATTGG 58.979 50.000 10.83 0.73 0.00 3.16
2898 2977 0.030638 CCGAGGCGCATTAAATTGGG 59.969 55.000 10.83 0.00 0.00 4.12
2899 2978 0.738389 CGAGGCGCATTAAATTGGGT 59.262 50.000 10.83 0.00 32.52 4.51
2900 2979 1.533756 CGAGGCGCATTAAATTGGGTG 60.534 52.381 10.83 0.00 32.52 4.61
2901 2980 0.823460 AGGCGCATTAAATTGGGTGG 59.177 50.000 10.83 0.00 32.52 4.61
2902 2981 0.534873 GGCGCATTAAATTGGGTGGT 59.465 50.000 10.83 0.00 32.52 4.16
2903 2982 1.066502 GGCGCATTAAATTGGGTGGTT 60.067 47.619 10.83 0.00 32.52 3.67
2904 2983 2.614229 GGCGCATTAAATTGGGTGGTTT 60.614 45.455 10.83 0.00 32.52 3.27
2905 2984 3.070748 GCGCATTAAATTGGGTGGTTTT 58.929 40.909 0.30 0.00 32.52 2.43
2906 2985 3.120373 GCGCATTAAATTGGGTGGTTTTG 60.120 43.478 0.30 0.00 32.52 2.44
2907 2986 4.061596 CGCATTAAATTGGGTGGTTTTGT 58.938 39.130 0.00 0.00 0.00 2.83
2908 2987 5.230942 CGCATTAAATTGGGTGGTTTTGTA 58.769 37.500 0.00 0.00 0.00 2.41
2909 2988 5.696724 CGCATTAAATTGGGTGGTTTTGTAA 59.303 36.000 0.00 0.00 0.00 2.41
2910 2989 6.202954 CGCATTAAATTGGGTGGTTTTGTAAA 59.797 34.615 0.00 0.00 0.00 2.01
2911 2990 7.570324 CGCATTAAATTGGGTGGTTTTGTAAAG 60.570 37.037 0.00 0.00 0.00 1.85
2912 2991 7.227711 GCATTAAATTGGGTGGTTTTGTAAAGT 59.772 33.333 0.00 0.00 0.00 2.66
2913 2992 9.765795 CATTAAATTGGGTGGTTTTGTAAAGTA 57.234 29.630 0.00 0.00 0.00 2.24
2914 2993 9.767228 ATTAAATTGGGTGGTTTTGTAAAGTAC 57.233 29.630 0.00 0.00 0.00 2.73
2915 2994 4.897025 TTGGGTGGTTTTGTAAAGTACG 57.103 40.909 0.00 0.00 0.00 3.67
2916 2995 4.148128 TGGGTGGTTTTGTAAAGTACGA 57.852 40.909 0.00 0.00 0.00 3.43
2917 2996 4.128643 TGGGTGGTTTTGTAAAGTACGAG 58.871 43.478 0.00 0.00 0.00 4.18
2918 2997 4.141756 TGGGTGGTTTTGTAAAGTACGAGA 60.142 41.667 0.00 0.00 0.00 4.04
2919 2998 4.999311 GGGTGGTTTTGTAAAGTACGAGAT 59.001 41.667 0.00 0.00 0.00 2.75
2920 2999 6.165577 GGGTGGTTTTGTAAAGTACGAGATA 58.834 40.000 0.00 0.00 0.00 1.98
2921 3000 6.091305 GGGTGGTTTTGTAAAGTACGAGATAC 59.909 42.308 0.00 0.00 0.00 2.24
2922 3001 6.646240 GGTGGTTTTGTAAAGTACGAGATACA 59.354 38.462 0.00 0.00 36.09 2.29
2923 3002 7.332678 GGTGGTTTTGTAAAGTACGAGATACAT 59.667 37.037 0.00 0.00 36.09 2.29
2924 3003 8.715088 GTGGTTTTGTAAAGTACGAGATACATT 58.285 33.333 0.00 0.00 36.09 2.71
2925 3004 8.928733 TGGTTTTGTAAAGTACGAGATACATTC 58.071 33.333 0.00 0.00 36.09 2.67
2926 3005 8.385858 GGTTTTGTAAAGTACGAGATACATTCC 58.614 37.037 0.00 4.78 36.09 3.01
2927 3006 9.148104 GTTTTGTAAAGTACGAGATACATTCCT 57.852 33.333 0.00 0.00 36.09 3.36
2928 3007 8.922058 TTTGTAAAGTACGAGATACATTCCTC 57.078 34.615 0.00 0.00 36.09 3.71
2929 3008 7.035840 TGTAAAGTACGAGATACATTCCTCC 57.964 40.000 0.00 0.00 36.09 4.30
2930 3009 6.604396 TGTAAAGTACGAGATACATTCCTCCA 59.396 38.462 0.00 0.00 36.09 3.86
2931 3010 5.517322 AAGTACGAGATACATTCCTCCAC 57.483 43.478 0.00 0.00 36.09 4.02
2932 3011 4.794334 AGTACGAGATACATTCCTCCACT 58.206 43.478 0.00 0.00 36.09 4.00
2933 3012 4.822896 AGTACGAGATACATTCCTCCACTC 59.177 45.833 0.00 0.00 36.09 3.51
2934 3013 3.632333 ACGAGATACATTCCTCCACTCA 58.368 45.455 0.00 0.00 0.00 3.41
2935 3014 3.381908 ACGAGATACATTCCTCCACTCAC 59.618 47.826 0.00 0.00 0.00 3.51
2936 3015 3.243569 CGAGATACATTCCTCCACTCACC 60.244 52.174 0.00 0.00 0.00 4.02
2937 3016 3.706594 GAGATACATTCCTCCACTCACCA 59.293 47.826 0.00 0.00 0.00 4.17
2938 3017 4.302067 AGATACATTCCTCCACTCACCAT 58.698 43.478 0.00 0.00 0.00 3.55
2939 3018 4.346418 AGATACATTCCTCCACTCACCATC 59.654 45.833 0.00 0.00 0.00 3.51
2940 3019 2.555664 ACATTCCTCCACTCACCATCT 58.444 47.619 0.00 0.00 0.00 2.90
2941 3020 3.724478 ACATTCCTCCACTCACCATCTA 58.276 45.455 0.00 0.00 0.00 1.98
2942 3021 3.452627 ACATTCCTCCACTCACCATCTAC 59.547 47.826 0.00 0.00 0.00 2.59
2943 3022 2.160721 TCCTCCACTCACCATCTACC 57.839 55.000 0.00 0.00 0.00 3.18
2944 3023 1.646447 TCCTCCACTCACCATCTACCT 59.354 52.381 0.00 0.00 0.00 3.08
2945 3024 2.044492 TCCTCCACTCACCATCTACCTT 59.956 50.000 0.00 0.00 0.00 3.50
2946 3025 2.169352 CCTCCACTCACCATCTACCTTG 59.831 54.545 0.00 0.00 0.00 3.61
2947 3026 2.169352 CTCCACTCACCATCTACCTTGG 59.831 54.545 0.00 0.00 40.26 3.61
2949 3028 2.305927 CCACTCACCATCTACCTTGGTT 59.694 50.000 0.00 0.00 45.19 3.67
2950 3029 3.338249 CACTCACCATCTACCTTGGTTG 58.662 50.000 0.00 0.00 45.19 3.77
2951 3030 2.305927 ACTCACCATCTACCTTGGTTGG 59.694 50.000 7.30 7.30 45.19 3.77
2952 3031 2.305927 CTCACCATCTACCTTGGTTGGT 59.694 50.000 8.42 8.42 45.19 3.67
2953 3032 2.436417 CACCATCTACCTTGGTTGGTG 58.564 52.381 20.88 20.88 45.19 4.17
2954 3033 2.344592 ACCATCTACCTTGGTTGGTGA 58.655 47.619 14.37 2.56 45.19 4.02
2955 3034 2.305927 ACCATCTACCTTGGTTGGTGAG 59.694 50.000 14.37 8.18 45.19 3.51
2956 3035 2.571653 CCATCTACCTTGGTTGGTGAGA 59.428 50.000 14.37 4.26 41.05 3.27
2957 3036 3.200825 CCATCTACCTTGGTTGGTGAGAT 59.799 47.826 14.37 6.22 41.05 2.75
2958 3037 4.324563 CCATCTACCTTGGTTGGTGAGATT 60.325 45.833 14.37 0.00 41.05 2.40
2959 3038 4.993705 TCTACCTTGGTTGGTGAGATTT 57.006 40.909 0.00 0.00 41.05 2.17
2960 3039 4.906618 TCTACCTTGGTTGGTGAGATTTC 58.093 43.478 0.00 0.00 41.05 2.17
2961 3040 3.593442 ACCTTGGTTGGTGAGATTTCA 57.407 42.857 0.00 0.00 39.17 2.69
2962 3041 4.118168 ACCTTGGTTGGTGAGATTTCAT 57.882 40.909 0.00 0.00 39.17 2.57
2963 3042 5.255397 ACCTTGGTTGGTGAGATTTCATA 57.745 39.130 0.00 0.00 39.17 2.15
2964 3043 5.831103 ACCTTGGTTGGTGAGATTTCATAT 58.169 37.500 0.00 0.00 39.17 1.78
2965 3044 6.256053 ACCTTGGTTGGTGAGATTTCATATT 58.744 36.000 0.00 0.00 39.17 1.28
2966 3045 6.725834 ACCTTGGTTGGTGAGATTTCATATTT 59.274 34.615 0.00 0.00 39.17 1.40
2967 3046 7.037438 CCTTGGTTGGTGAGATTTCATATTTG 58.963 38.462 0.00 0.00 35.39 2.32
2968 3047 7.093814 CCTTGGTTGGTGAGATTTCATATTTGA 60.094 37.037 0.00 0.00 35.39 2.69
2969 3048 7.395190 TGGTTGGTGAGATTTCATATTTGAG 57.605 36.000 0.00 0.00 35.39 3.02
2970 3049 6.127647 TGGTTGGTGAGATTTCATATTTGAGC 60.128 38.462 0.00 0.00 35.39 4.26
2971 3050 6.268566 GTTGGTGAGATTTCATATTTGAGCC 58.731 40.000 0.00 0.00 35.39 4.70
2972 3051 4.889409 TGGTGAGATTTCATATTTGAGCCC 59.111 41.667 0.00 0.00 35.39 5.19
2973 3052 5.136105 GGTGAGATTTCATATTTGAGCCCT 58.864 41.667 0.00 0.00 35.39 5.19
2974 3053 6.126507 TGGTGAGATTTCATATTTGAGCCCTA 60.127 38.462 0.00 0.00 35.39 3.53
2975 3054 6.944862 GGTGAGATTTCATATTTGAGCCCTAT 59.055 38.462 0.00 0.00 35.39 2.57
2976 3055 8.103305 GGTGAGATTTCATATTTGAGCCCTATA 58.897 37.037 0.00 0.00 35.39 1.31
2977 3056 9.507329 GTGAGATTTCATATTTGAGCCCTATAA 57.493 33.333 0.00 0.00 35.39 0.98
2980 3059 9.301897 AGATTTCATATTTGAGCCCTATAAACC 57.698 33.333 0.00 0.00 32.27 3.27
2981 3060 7.504924 TTTCATATTTGAGCCCTATAAACCG 57.495 36.000 0.00 0.00 32.27 4.44
2982 3061 5.556915 TCATATTTGAGCCCTATAAACCGG 58.443 41.667 0.00 0.00 0.00 5.28
2983 3062 5.308497 TCATATTTGAGCCCTATAAACCGGA 59.692 40.000 9.46 0.00 0.00 5.14
2984 3063 4.513406 ATTTGAGCCCTATAAACCGGAA 57.487 40.909 9.46 0.00 0.00 4.30
2985 3064 4.304048 TTTGAGCCCTATAAACCGGAAA 57.696 40.909 9.46 0.00 0.00 3.13
2986 3065 4.304048 TTGAGCCCTATAAACCGGAAAA 57.696 40.909 9.46 0.00 0.00 2.29
2987 3066 3.881220 TGAGCCCTATAAACCGGAAAAG 58.119 45.455 9.46 0.00 0.00 2.27
2988 3067 3.520317 TGAGCCCTATAAACCGGAAAAGA 59.480 43.478 9.46 0.00 0.00 2.52
2989 3068 4.127907 GAGCCCTATAAACCGGAAAAGAG 58.872 47.826 9.46 0.00 0.00 2.85
2990 3069 3.118000 AGCCCTATAAACCGGAAAAGAGG 60.118 47.826 9.46 8.45 0.00 3.69
2991 3070 3.816994 CCCTATAAACCGGAAAAGAGGG 58.183 50.000 9.46 14.09 36.68 4.30
2992 3071 3.457012 CCCTATAAACCGGAAAAGAGGGA 59.543 47.826 22.02 0.00 44.48 4.20
2993 3072 4.444449 CCCTATAAACCGGAAAAGAGGGAG 60.444 50.000 22.02 3.88 44.48 4.30
2994 3073 4.163649 CCTATAAACCGGAAAAGAGGGAGT 59.836 45.833 9.46 0.00 0.00 3.85
2995 3074 5.364735 CCTATAAACCGGAAAAGAGGGAGTA 59.635 44.000 9.46 0.00 0.00 2.59
2996 3075 5.970501 ATAAACCGGAAAAGAGGGAGTAT 57.029 39.130 9.46 0.00 0.00 2.12
2997 3076 4.652679 AAACCGGAAAAGAGGGAGTATT 57.347 40.909 9.46 0.00 0.00 1.89
2998 3077 4.652679 AACCGGAAAAGAGGGAGTATTT 57.347 40.909 9.46 0.00 0.00 1.40
2999 3078 5.767277 AACCGGAAAAGAGGGAGTATTTA 57.233 39.130 9.46 0.00 0.00 1.40
3000 3079 5.354842 ACCGGAAAAGAGGGAGTATTTAG 57.645 43.478 9.46 0.00 0.00 1.85
3001 3080 4.781621 ACCGGAAAAGAGGGAGTATTTAGT 59.218 41.667 9.46 0.00 0.00 2.24
3002 3081 5.250082 ACCGGAAAAGAGGGAGTATTTAGTT 59.750 40.000 9.46 0.00 0.00 2.24
3003 3082 6.178324 CCGGAAAAGAGGGAGTATTTAGTTT 58.822 40.000 0.00 0.00 0.00 2.66
3004 3083 6.657966 CCGGAAAAGAGGGAGTATTTAGTTTT 59.342 38.462 0.00 0.00 0.00 2.43
3005 3084 7.176165 CCGGAAAAGAGGGAGTATTTAGTTTTT 59.824 37.037 0.00 0.00 0.00 1.94
3006 3085 8.021396 CGGAAAAGAGGGAGTATTTAGTTTTTG 58.979 37.037 0.00 0.00 0.00 2.44
3007 3086 8.857098 GGAAAAGAGGGAGTATTTAGTTTTTGT 58.143 33.333 0.00 0.00 0.00 2.83
3008 3087 9.894783 GAAAAGAGGGAGTATTTAGTTTTTGTC 57.105 33.333 0.00 0.00 0.00 3.18
3009 3088 9.642343 AAAAGAGGGAGTATTTAGTTTTTGTCT 57.358 29.630 0.00 0.00 0.00 3.41
3010 3089 9.642343 AAAGAGGGAGTATTTAGTTTTTGTCTT 57.358 29.630 0.00 0.00 0.00 3.01
3028 3107 9.620660 TTTTGTCTTAAGTCTCAAAACTTTGAC 57.379 29.630 20.28 11.91 41.88 3.18
3029 3108 8.561738 TTGTCTTAAGTCTCAAAACTTTGACT 57.438 30.769 1.63 0.00 41.88 3.41
3030 3109 9.661563 TTGTCTTAAGTCTCAAAACTTTGACTA 57.338 29.630 1.63 10.47 41.88 2.59
3031 3110 9.661563 TGTCTTAAGTCTCAAAACTTTGACTAA 57.338 29.630 1.63 0.00 41.88 2.24
3032 3111 9.917872 GTCTTAAGTCTCAAAACTTTGACTAAC 57.082 33.333 1.63 1.42 41.88 2.34
3033 3112 9.886132 TCTTAAGTCTCAAAACTTTGACTAACT 57.114 29.630 1.63 3.40 41.88 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
134 146 8.457261 TCTTTTACGAGTAGACCAGAAGATAAC 58.543 37.037 0.00 0.00 0.00 1.89
189 201 0.310543 TTCTCGTGTGTTGCAATGGC 59.689 50.000 0.59 0.00 41.68 4.40
192 204 5.431420 TGTAATTTCTCGTGTGTTGCAAT 57.569 34.783 0.59 0.00 0.00 3.56
260 272 1.351017 TGGATGAAGGACAAGGTGGAC 59.649 52.381 0.00 0.00 0.00 4.02
268 280 1.918262 AGGAATGCTGGATGAAGGACA 59.082 47.619 0.00 0.00 0.00 4.02
276 288 3.526841 AGAGGAAAAGAGGAATGCTGGAT 59.473 43.478 0.00 0.00 0.00 3.41
293 305 6.097915 AGTGACAAATAAAAGACGAGAGGA 57.902 37.500 0.00 0.00 0.00 3.71
337 350 6.638468 GGCAAGAACTTAATGTCTTGTCAAAG 59.362 38.462 20.07 3.74 42.39 2.77
342 355 6.463995 TTTGGCAAGAACTTAATGTCTTGT 57.536 33.333 20.81 0.00 40.96 3.16
386 399 3.951680 CCCGTGATTTACCTGCCTAAAAT 59.048 43.478 0.00 0.00 0.00 1.82
387 400 3.244981 ACCCGTGATTTACCTGCCTAAAA 60.245 43.478 0.00 0.00 0.00 1.52
394 407 6.072397 TGTTTATCAAACCCGTGATTTACCTG 60.072 38.462 0.00 0.00 40.67 4.00
444 458 9.743057 AAGAAGTTCACTCTGATTATCTATTCG 57.257 33.333 5.50 0.00 0.00 3.34
461 475 8.375506 ACCTGTGTCAATATTCTAAGAAGTTCA 58.624 33.333 5.50 0.00 0.00 3.18
462 476 8.779354 ACCTGTGTCAATATTCTAAGAAGTTC 57.221 34.615 0.00 0.00 0.00 3.01
496 510 1.914634 CTCGCGCACTTGACTATTCT 58.085 50.000 8.75 0.00 0.00 2.40
497 511 0.299003 GCTCGCGCACTTGACTATTC 59.701 55.000 8.75 0.00 35.78 1.75
498 512 0.108615 AGCTCGCGCACTTGACTATT 60.109 50.000 8.75 0.00 39.10 1.73
499 513 0.738975 TAGCTCGCGCACTTGACTAT 59.261 50.000 8.75 0.00 39.10 2.12
500 514 0.738975 ATAGCTCGCGCACTTGACTA 59.261 50.000 8.75 0.00 39.10 2.59
501 515 0.108615 AATAGCTCGCGCACTTGACT 60.109 50.000 8.75 0.00 39.10 3.41
502 516 1.556564 TAATAGCTCGCGCACTTGAC 58.443 50.000 8.75 0.00 39.10 3.18
503 517 2.034685 AGATAATAGCTCGCGCACTTGA 59.965 45.455 8.75 0.00 39.10 3.02
504 518 2.398498 AGATAATAGCTCGCGCACTTG 58.602 47.619 8.75 0.00 39.10 3.16
505 519 2.802787 AGATAATAGCTCGCGCACTT 57.197 45.000 8.75 0.00 39.10 3.16
506 520 3.440522 TCATAGATAATAGCTCGCGCACT 59.559 43.478 8.75 3.11 39.10 4.40
507 521 3.759418 TCATAGATAATAGCTCGCGCAC 58.241 45.455 8.75 0.00 39.10 5.34
508 522 4.639135 ATCATAGATAATAGCTCGCGCA 57.361 40.909 8.75 0.00 39.10 6.09
509 523 4.912766 GGTATCATAGATAATAGCTCGCGC 59.087 45.833 0.00 0.00 0.00 6.86
529 543 5.000591 TCTCATCGCTTCAATTGTTTGGTA 58.999 37.500 5.13 0.00 33.44 3.25
613 628 1.783365 AGCCCTCTCCCTCTTTTGTTT 59.217 47.619 0.00 0.00 0.00 2.83
616 631 3.871701 GAGCCCTCTCCCTCTTTTG 57.128 57.895 0.00 0.00 33.19 2.44
625 640 3.151022 CCTGTCCGGAGCCCTCTC 61.151 72.222 3.06 0.00 38.62 3.20
868 884 3.535962 CAGGGAGGAGAGAGGCGC 61.536 72.222 0.00 0.00 0.00 6.53
870 886 0.188342 ATCTCAGGGAGGAGAGAGGC 59.812 60.000 0.00 0.00 46.36 4.70
876 893 5.165961 TGTTGTTTAATCTCAGGGAGGAG 57.834 43.478 0.00 0.00 36.21 3.69
890 907 2.610374 GCCAAGTGACGACTGTTGTTTA 59.390 45.455 1.52 0.00 30.61 2.01
895 912 0.753262 AGAGCCAAGTGACGACTGTT 59.247 50.000 0.00 0.00 30.61 3.16
916 937 1.451567 TAGCTGGAGGAGACGGACG 60.452 63.158 0.00 0.00 0.00 4.79
920 941 1.673920 GAGAAGTAGCTGGAGGAGACG 59.326 57.143 0.00 0.00 0.00 4.18
930 951 3.391296 AGAGAGAGATCGGAGAAGTAGCT 59.609 47.826 0.00 0.00 43.58 3.32
949 1000 0.753479 TAGGCGCAAGAGGGAGAGAG 60.753 60.000 10.83 0.00 43.02 3.20
950 1001 0.753479 CTAGGCGCAAGAGGGAGAGA 60.753 60.000 10.83 0.00 43.02 3.10
951 1002 1.739049 CTAGGCGCAAGAGGGAGAG 59.261 63.158 10.83 0.00 43.02 3.20
952 1003 1.758514 CCTAGGCGCAAGAGGGAGA 60.759 63.158 10.83 0.00 43.02 3.71
953 1004 2.818132 CCTAGGCGCAAGAGGGAG 59.182 66.667 10.83 0.00 43.02 4.30
1146 1197 6.929049 TGAGTCCGCATACCAAATAAAGATAG 59.071 38.462 0.00 0.00 0.00 2.08
1426 1484 1.868997 GCCATTACATCGCATCCGG 59.131 57.895 0.00 0.00 34.56 5.14
1954 2026 2.734079 GTGCAAGGAAGAAGAAGACGAG 59.266 50.000 0.00 0.00 0.00 4.18
2066 2141 8.200792 TCTAATTAATCTGAGCTCTGACTTTCC 58.799 37.037 23.71 0.00 0.00 3.13
2101 2176 6.722972 AATTTCAGTATAACTACGTACGCG 57.277 37.500 16.72 3.53 44.93 6.01
2253 2329 6.421202 CCTACTCAATTTTATGTCGAGCTACC 59.579 42.308 0.00 0.00 0.00 3.18
2284 2360 4.636206 GTGGATTACAGGAAGCGATTTCTT 59.364 41.667 0.00 0.00 36.03 2.52
2285 2361 4.192317 GTGGATTACAGGAAGCGATTTCT 58.808 43.478 0.00 0.00 36.03 2.52
2355 2431 3.686726 CAGACTGGGCTACAATCAAAGAC 59.313 47.826 0.00 0.00 0.00 3.01
2403 2479 1.176527 CAGCATTGGTTCCGGTGAAT 58.823 50.000 0.00 0.00 31.98 2.57
2487 2564 1.202592 TGAGCTCAACTACCAACGCAA 60.203 47.619 15.67 0.00 0.00 4.85
2586 2663 2.414138 ACTACATTCGTAACAAAGCGCC 59.586 45.455 2.29 0.00 0.00 6.53
2620 2699 6.428295 TCCGTCCTAAAATAAATGTCCCAAT 58.572 36.000 0.00 0.00 0.00 3.16
2621 2700 5.817784 TCCGTCCTAAAATAAATGTCCCAA 58.182 37.500 0.00 0.00 0.00 4.12
2622 2701 5.438698 TCCGTCCTAAAATAAATGTCCCA 57.561 39.130 0.00 0.00 0.00 4.37
2623 2702 6.059484 TCATCCGTCCTAAAATAAATGTCCC 58.941 40.000 0.00 0.00 0.00 4.46
2624 2703 7.282450 ACTTCATCCGTCCTAAAATAAATGTCC 59.718 37.037 0.00 0.00 0.00 4.02
2625 2704 8.209917 ACTTCATCCGTCCTAAAATAAATGTC 57.790 34.615 0.00 0.00 0.00 3.06
2626 2705 9.326413 CTACTTCATCCGTCCTAAAATAAATGT 57.674 33.333 0.00 0.00 0.00 2.71
2627 2706 9.326413 ACTACTTCATCCGTCCTAAAATAAATG 57.674 33.333 0.00 0.00 0.00 2.32
2629 2708 9.807649 GTACTACTTCATCCGTCCTAAAATAAA 57.192 33.333 0.00 0.00 0.00 1.40
2630 2709 8.970020 TGTACTACTTCATCCGTCCTAAAATAA 58.030 33.333 0.00 0.00 0.00 1.40
2631 2710 8.523915 TGTACTACTTCATCCGTCCTAAAATA 57.476 34.615 0.00 0.00 0.00 1.40
2632 2711 7.414222 TGTACTACTTCATCCGTCCTAAAAT 57.586 36.000 0.00 0.00 0.00 1.82
2633 2712 6.839124 TGTACTACTTCATCCGTCCTAAAA 57.161 37.500 0.00 0.00 0.00 1.52
2634 2713 8.523915 TTATGTACTACTTCATCCGTCCTAAA 57.476 34.615 0.00 0.00 0.00 1.85
2635 2714 8.523915 TTTATGTACTACTTCATCCGTCCTAA 57.476 34.615 0.00 0.00 0.00 2.69
2636 2715 8.523915 TTTTATGTACTACTTCATCCGTCCTA 57.476 34.615 0.00 0.00 0.00 2.94
2637 2716 7.414222 TTTTATGTACTACTTCATCCGTCCT 57.586 36.000 0.00 0.00 0.00 3.85
2638 2717 8.548721 CATTTTTATGTACTACTTCATCCGTCC 58.451 37.037 0.00 0.00 0.00 4.79
2639 2718 8.062448 GCATTTTTATGTACTACTTCATCCGTC 58.938 37.037 0.00 0.00 0.00 4.79
2640 2719 7.551262 TGCATTTTTATGTACTACTTCATCCGT 59.449 33.333 0.00 0.00 0.00 4.69
2641 2720 7.850982 GTGCATTTTTATGTACTACTTCATCCG 59.149 37.037 0.00 0.00 34.88 4.18
2642 2721 8.129211 GGTGCATTTTTATGTACTACTTCATCC 58.871 37.037 0.00 0.00 37.33 3.51
2643 2722 8.893727 AGGTGCATTTTTATGTACTACTTCATC 58.106 33.333 0.00 0.00 37.33 2.92
2644 2723 8.807948 AGGTGCATTTTTATGTACTACTTCAT 57.192 30.769 0.00 0.00 37.33 2.57
2645 2724 8.630054 AAGGTGCATTTTTATGTACTACTTCA 57.370 30.769 0.00 0.00 37.33 3.02
2687 2766 9.631452 GCTTCTAAACAATATTTGCTCTTTTCT 57.369 29.630 0.00 0.00 0.00 2.52
2688 2767 9.410556 TGCTTCTAAACAATATTTGCTCTTTTC 57.589 29.630 0.00 0.00 0.00 2.29
2689 2768 9.762933 TTGCTTCTAAACAATATTTGCTCTTTT 57.237 25.926 0.00 0.00 0.00 2.27
2690 2769 9.415544 CTTGCTTCTAAACAATATTTGCTCTTT 57.584 29.630 0.00 0.00 0.00 2.52
2691 2770 8.796475 TCTTGCTTCTAAACAATATTTGCTCTT 58.204 29.630 0.00 0.00 0.00 2.85
2692 2771 8.239998 GTCTTGCTTCTAAACAATATTTGCTCT 58.760 33.333 0.00 0.00 0.00 4.09
2693 2772 7.217070 CGTCTTGCTTCTAAACAATATTTGCTC 59.783 37.037 0.00 0.00 0.00 4.26
2694 2773 7.023575 CGTCTTGCTTCTAAACAATATTTGCT 58.976 34.615 0.00 0.00 0.00 3.91
2695 2774 6.801862 ACGTCTTGCTTCTAAACAATATTTGC 59.198 34.615 0.00 0.00 0.00 3.68
2696 2775 8.015087 TCACGTCTTGCTTCTAAACAATATTTG 58.985 33.333 0.00 0.00 0.00 2.32
2697 2776 8.094798 TCACGTCTTGCTTCTAAACAATATTT 57.905 30.769 0.00 0.00 0.00 1.40
2698 2777 7.667043 TCACGTCTTGCTTCTAAACAATATT 57.333 32.000 0.00 0.00 0.00 1.28
2699 2778 7.172532 TGTTCACGTCTTGCTTCTAAACAATAT 59.827 33.333 0.00 0.00 0.00 1.28
2700 2779 6.480651 TGTTCACGTCTTGCTTCTAAACAATA 59.519 34.615 0.00 0.00 0.00 1.90
2701 2780 5.295787 TGTTCACGTCTTGCTTCTAAACAAT 59.704 36.000 0.00 0.00 0.00 2.71
2702 2781 4.632251 TGTTCACGTCTTGCTTCTAAACAA 59.368 37.500 0.00 0.00 0.00 2.83
2703 2782 4.185394 TGTTCACGTCTTGCTTCTAAACA 58.815 39.130 0.00 0.00 0.00 2.83
2704 2783 4.789095 TGTTCACGTCTTGCTTCTAAAC 57.211 40.909 0.00 0.00 0.00 2.01
2705 2784 5.053811 TGATGTTCACGTCTTGCTTCTAAA 58.946 37.500 0.99 0.00 33.19 1.85
2706 2785 4.627058 TGATGTTCACGTCTTGCTTCTAA 58.373 39.130 0.99 0.00 33.19 2.10
2707 2786 4.251543 TGATGTTCACGTCTTGCTTCTA 57.748 40.909 0.99 0.00 33.19 2.10
2708 2787 3.111853 TGATGTTCACGTCTTGCTTCT 57.888 42.857 0.99 0.00 33.19 2.85
2709 2788 3.482598 CGATGATGTTCACGTCTTGCTTC 60.483 47.826 0.99 0.00 33.19 3.86
2710 2789 2.413112 CGATGATGTTCACGTCTTGCTT 59.587 45.455 0.99 0.00 33.19 3.91
2711 2790 1.995484 CGATGATGTTCACGTCTTGCT 59.005 47.619 0.99 0.00 33.19 3.91
2712 2791 1.726791 ACGATGATGTTCACGTCTTGC 59.273 47.619 0.00 0.00 31.95 4.01
2713 2792 3.547868 CCTACGATGATGTTCACGTCTTG 59.452 47.826 0.00 0.00 36.28 3.02
2714 2793 3.192844 ACCTACGATGATGTTCACGTCTT 59.807 43.478 0.00 0.00 36.28 3.01
2715 2794 2.753452 ACCTACGATGATGTTCACGTCT 59.247 45.455 0.00 0.00 36.28 4.18
2716 2795 3.146618 ACCTACGATGATGTTCACGTC 57.853 47.619 0.00 0.00 36.28 4.34
2717 2796 4.025015 GTACCTACGATGATGTTCACGT 57.975 45.455 0.00 0.00 37.66 4.49
2732 2811 0.324923 ATGTGGAGTGGGCGTACCTA 60.325 55.000 0.15 0.00 41.11 3.08
2733 2812 0.324923 TATGTGGAGTGGGCGTACCT 60.325 55.000 0.15 0.00 41.11 3.08
2734 2813 0.538118 TTATGTGGAGTGGGCGTACC 59.462 55.000 0.00 0.00 40.81 3.34
2735 2814 2.210116 CATTATGTGGAGTGGGCGTAC 58.790 52.381 0.00 0.00 0.00 3.67
2736 2815 1.474320 GCATTATGTGGAGTGGGCGTA 60.474 52.381 0.00 0.00 0.00 4.42
2737 2816 0.748005 GCATTATGTGGAGTGGGCGT 60.748 55.000 0.00 0.00 0.00 5.68
2738 2817 0.464373 AGCATTATGTGGAGTGGGCG 60.464 55.000 0.00 0.00 0.00 6.13
2739 2818 2.618709 GTTAGCATTATGTGGAGTGGGC 59.381 50.000 0.00 0.00 0.00 5.36
2740 2819 4.156455 AGTTAGCATTATGTGGAGTGGG 57.844 45.455 0.00 0.00 0.00 4.61
2741 2820 4.745125 CGTAGTTAGCATTATGTGGAGTGG 59.255 45.833 0.00 0.00 0.00 4.00
2742 2821 5.348986 ACGTAGTTAGCATTATGTGGAGTG 58.651 41.667 0.00 0.00 37.78 3.51
2743 2822 5.593679 ACGTAGTTAGCATTATGTGGAGT 57.406 39.130 0.00 0.00 37.78 3.85
2744 2823 6.736123 AGTACGTAGTTAGCATTATGTGGAG 58.264 40.000 0.00 0.00 37.78 3.86
2745 2824 6.238842 GGAGTACGTAGTTAGCATTATGTGGA 60.239 42.308 4.03 0.00 37.78 4.02
2746 2825 5.919141 GGAGTACGTAGTTAGCATTATGTGG 59.081 44.000 4.03 0.00 37.78 4.17
2747 2826 5.919141 GGGAGTACGTAGTTAGCATTATGTG 59.081 44.000 4.03 0.00 37.78 3.21
2748 2827 5.832060 AGGGAGTACGTAGTTAGCATTATGT 59.168 40.000 4.03 0.00 37.78 2.29
2749 2828 6.328641 AGGGAGTACGTAGTTAGCATTATG 57.671 41.667 4.03 0.00 37.78 1.90
2750 2829 5.476254 GGAGGGAGTACGTAGTTAGCATTAT 59.524 44.000 4.03 0.00 37.78 1.28
2751 2830 4.823989 GGAGGGAGTACGTAGTTAGCATTA 59.176 45.833 4.03 0.00 37.78 1.90
2752 2831 3.635836 GGAGGGAGTACGTAGTTAGCATT 59.364 47.826 4.03 0.00 37.78 3.56
2753 2832 3.220940 GGAGGGAGTACGTAGTTAGCAT 58.779 50.000 4.03 0.00 37.78 3.79
2754 2833 2.648059 GGAGGGAGTACGTAGTTAGCA 58.352 52.381 4.03 0.00 37.78 3.49
2755 2834 1.601430 CGGAGGGAGTACGTAGTTAGC 59.399 57.143 4.03 0.00 37.78 3.09
2756 2835 2.869192 GACGGAGGGAGTACGTAGTTAG 59.131 54.545 4.03 0.00 37.78 2.34
2757 2836 2.420129 GGACGGAGGGAGTACGTAGTTA 60.420 54.545 4.03 0.00 37.78 2.24
2758 2837 1.680249 GGACGGAGGGAGTACGTAGTT 60.680 57.143 4.03 0.00 37.78 2.24
2760 2839 1.156645 CGGACGGAGGGAGTACGTAG 61.157 65.000 0.00 0.00 40.75 3.51
2761 2840 1.153369 CGGACGGAGGGAGTACGTA 60.153 63.158 0.00 0.00 40.75 3.57
2762 2841 2.437359 CGGACGGAGGGAGTACGT 60.437 66.667 0.00 0.00 40.75 3.57
2764 2843 3.885521 CGCGGACGGAGGGAGTAC 61.886 72.222 0.00 0.00 34.97 2.73
2765 2844 2.898920 ATTCGCGGACGGAGGGAGTA 62.899 60.000 6.13 0.00 40.63 2.59
2766 2845 2.898920 TATTCGCGGACGGAGGGAGT 62.899 60.000 6.13 0.00 40.63 3.85
2767 2846 1.731433 TTATTCGCGGACGGAGGGAG 61.731 60.000 6.13 0.00 40.63 4.30
2768 2847 1.731433 CTTATTCGCGGACGGAGGGA 61.731 60.000 6.13 0.00 40.63 4.20
2769 2848 1.299926 CTTATTCGCGGACGGAGGG 60.300 63.158 6.13 0.00 40.63 4.30
2770 2849 0.870307 CACTTATTCGCGGACGGAGG 60.870 60.000 6.13 0.00 40.63 4.30
2771 2850 0.179145 ACACTTATTCGCGGACGGAG 60.179 55.000 6.13 0.00 40.63 4.63
2772 2851 1.093972 TACACTTATTCGCGGACGGA 58.906 50.000 6.13 0.00 40.63 4.69
2773 2852 1.784856 CATACACTTATTCGCGGACGG 59.215 52.381 6.13 0.00 40.63 4.79
2774 2853 1.189446 GCATACACTTATTCGCGGACG 59.811 52.381 6.13 0.00 42.01 4.79
2775 2854 2.470821 AGCATACACTTATTCGCGGAC 58.529 47.619 6.13 0.00 0.00 4.79
2776 2855 2.545113 GGAGCATACACTTATTCGCGGA 60.545 50.000 6.13 0.00 0.00 5.54
2777 2856 1.792949 GGAGCATACACTTATTCGCGG 59.207 52.381 6.13 0.00 0.00 6.46
2778 2857 1.792949 GGGAGCATACACTTATTCGCG 59.207 52.381 0.00 0.00 0.00 5.87
2779 2858 3.060602 GAGGGAGCATACACTTATTCGC 58.939 50.000 0.00 0.00 0.00 4.70
2780 2859 4.592485 AGAGGGAGCATACACTTATTCG 57.408 45.455 0.00 0.00 0.00 3.34
2781 2860 7.329717 CGAATAAGAGGGAGCATACACTTATTC 59.670 40.741 21.62 21.62 44.63 1.75
2782 2861 7.155328 CGAATAAGAGGGAGCATACACTTATT 58.845 38.462 0.00 0.00 40.65 1.40
2783 2862 6.295349 CCGAATAAGAGGGAGCATACACTTAT 60.295 42.308 0.00 0.00 33.77 1.73
2784 2863 5.010719 CCGAATAAGAGGGAGCATACACTTA 59.989 44.000 0.00 0.00 0.00 2.24
2785 2864 4.202264 CCGAATAAGAGGGAGCATACACTT 60.202 45.833 0.00 0.00 0.00 3.16
2786 2865 3.322254 CCGAATAAGAGGGAGCATACACT 59.678 47.826 0.00 0.00 0.00 3.55
2787 2866 3.069729 ACCGAATAAGAGGGAGCATACAC 59.930 47.826 0.00 0.00 0.00 2.90
2788 2867 3.305720 ACCGAATAAGAGGGAGCATACA 58.694 45.455 0.00 0.00 0.00 2.29
2789 2868 4.338379 AACCGAATAAGAGGGAGCATAC 57.662 45.455 0.00 0.00 0.00 2.39
2790 2869 6.681729 ATAAACCGAATAAGAGGGAGCATA 57.318 37.500 0.00 0.00 0.00 3.14
2791 2870 3.933861 AAACCGAATAAGAGGGAGCAT 57.066 42.857 0.00 0.00 0.00 3.79
2792 2871 5.011738 CCTATAAACCGAATAAGAGGGAGCA 59.988 44.000 0.00 0.00 0.00 4.26
2793 2872 5.480205 CCTATAAACCGAATAAGAGGGAGC 58.520 45.833 0.00 0.00 0.00 4.70
2794 2873 5.569026 GCCCTATAAACCGAATAAGAGGGAG 60.569 48.000 7.83 0.00 44.48 4.30
2795 2874 4.285260 GCCCTATAAACCGAATAAGAGGGA 59.715 45.833 7.83 0.00 44.48 4.20
2796 2875 4.286291 AGCCCTATAAACCGAATAAGAGGG 59.714 45.833 0.00 0.00 44.52 4.30
2797 2876 5.485209 AGCCCTATAAACCGAATAAGAGG 57.515 43.478 0.00 0.00 0.00 3.69
2798 2877 8.532819 AGATAAGCCCTATAAACCGAATAAGAG 58.467 37.037 0.00 0.00 0.00 2.85
2799 2878 8.431910 AGATAAGCCCTATAAACCGAATAAGA 57.568 34.615 0.00 0.00 0.00 2.10
2804 2883 9.856162 AAATTAAGATAAGCCCTATAAACCGAA 57.144 29.630 0.00 0.00 0.00 4.30
2805 2884 9.856162 AAAATTAAGATAAGCCCTATAAACCGA 57.144 29.630 0.00 0.00 0.00 4.69
2829 2908 7.337184 AGGCCTTTAAATTGGAAAAACGAAAAA 59.663 29.630 0.00 0.00 0.00 1.94
2830 2909 6.824196 AGGCCTTTAAATTGGAAAAACGAAAA 59.176 30.769 0.00 0.00 0.00 2.29
2831 2910 6.350103 AGGCCTTTAAATTGGAAAAACGAAA 58.650 32.000 0.00 0.00 0.00 3.46
2832 2911 5.919755 AGGCCTTTAAATTGGAAAAACGAA 58.080 33.333 0.00 0.00 0.00 3.85
2833 2912 5.069251 TGAGGCCTTTAAATTGGAAAAACGA 59.931 36.000 6.77 0.00 0.00 3.85
2834 2913 5.293560 TGAGGCCTTTAAATTGGAAAAACG 58.706 37.500 6.77 0.00 0.00 3.60
2835 2914 7.161404 AGATGAGGCCTTTAAATTGGAAAAAC 58.839 34.615 6.77 0.00 0.00 2.43
2836 2915 7.315066 AGATGAGGCCTTTAAATTGGAAAAA 57.685 32.000 6.77 0.00 0.00 1.94
2837 2916 6.070824 GGAGATGAGGCCTTTAAATTGGAAAA 60.071 38.462 6.77 0.00 0.00 2.29
2838 2917 5.422012 GGAGATGAGGCCTTTAAATTGGAAA 59.578 40.000 6.77 0.00 0.00 3.13
2839 2918 4.956075 GGAGATGAGGCCTTTAAATTGGAA 59.044 41.667 6.77 0.00 0.00 3.53
2840 2919 4.017591 TGGAGATGAGGCCTTTAAATTGGA 60.018 41.667 6.77 0.00 0.00 3.53
2841 2920 4.280819 TGGAGATGAGGCCTTTAAATTGG 58.719 43.478 6.77 0.00 0.00 3.16
2842 2921 5.361857 ACATGGAGATGAGGCCTTTAAATTG 59.638 40.000 6.77 1.23 33.36 2.32
2843 2922 5.522641 ACATGGAGATGAGGCCTTTAAATT 58.477 37.500 6.77 0.00 33.36 1.82
2844 2923 5.134725 ACATGGAGATGAGGCCTTTAAAT 57.865 39.130 6.77 0.00 33.36 1.40
2845 2924 4.526970 GACATGGAGATGAGGCCTTTAAA 58.473 43.478 6.77 0.00 33.36 1.52
2846 2925 3.117888 GGACATGGAGATGAGGCCTTTAA 60.118 47.826 6.77 0.00 33.36 1.52
2847 2926 2.439507 GGACATGGAGATGAGGCCTTTA 59.560 50.000 6.77 0.00 33.36 1.85
2848 2927 1.213926 GGACATGGAGATGAGGCCTTT 59.786 52.381 6.77 0.00 33.36 3.11
2849 2928 0.842635 GGACATGGAGATGAGGCCTT 59.157 55.000 6.77 0.00 33.36 4.35
2850 2929 0.030297 AGGACATGGAGATGAGGCCT 60.030 55.000 3.86 3.86 33.36 5.19
2851 2930 1.722034 TAGGACATGGAGATGAGGCC 58.278 55.000 0.00 0.00 33.36 5.19
2852 2931 3.326006 TCAATAGGACATGGAGATGAGGC 59.674 47.826 0.00 0.00 33.36 4.70
2853 2932 4.837298 TCTCAATAGGACATGGAGATGAGG 59.163 45.833 0.00 0.00 35.08 3.86
2854 2933 6.608539 ATCTCAATAGGACATGGAGATGAG 57.391 41.667 7.36 7.89 42.15 2.90
2855 2934 6.013898 GGAATCTCAATAGGACATGGAGATGA 60.014 42.308 8.54 0.28 42.73 2.92
2856 2935 6.171921 GGAATCTCAATAGGACATGGAGATG 58.828 44.000 8.54 0.00 42.73 2.90
2857 2936 5.046735 CGGAATCTCAATAGGACATGGAGAT 60.047 44.000 0.00 0.00 44.76 2.75
2858 2937 4.281941 CGGAATCTCAATAGGACATGGAGA 59.718 45.833 0.00 0.00 38.80 3.71
2859 2938 4.281941 TCGGAATCTCAATAGGACATGGAG 59.718 45.833 0.00 0.00 0.00 3.86
2860 2939 4.223144 TCGGAATCTCAATAGGACATGGA 58.777 43.478 0.00 0.00 0.00 3.41
2861 2940 4.562347 CCTCGGAATCTCAATAGGACATGG 60.562 50.000 0.00 0.00 0.00 3.66
2862 2941 4.564041 CCTCGGAATCTCAATAGGACATG 58.436 47.826 0.00 0.00 0.00 3.21
2863 2942 3.007398 GCCTCGGAATCTCAATAGGACAT 59.993 47.826 0.00 0.00 0.00 3.06
2864 2943 2.365617 GCCTCGGAATCTCAATAGGACA 59.634 50.000 0.00 0.00 0.00 4.02
2865 2944 2.608261 CGCCTCGGAATCTCAATAGGAC 60.608 54.545 0.00 0.00 0.00 3.85
2866 2945 1.613925 CGCCTCGGAATCTCAATAGGA 59.386 52.381 0.00 0.00 0.00 2.94
2867 2946 1.937108 GCGCCTCGGAATCTCAATAGG 60.937 57.143 0.00 0.00 0.00 2.57
2868 2947 1.269778 TGCGCCTCGGAATCTCAATAG 60.270 52.381 4.18 0.00 0.00 1.73
2869 2948 0.750249 TGCGCCTCGGAATCTCAATA 59.250 50.000 4.18 0.00 0.00 1.90
2870 2949 0.107456 ATGCGCCTCGGAATCTCAAT 59.893 50.000 4.18 0.00 0.00 2.57
2871 2950 0.107703 AATGCGCCTCGGAATCTCAA 60.108 50.000 4.18 0.00 0.00 3.02
2872 2951 0.750249 TAATGCGCCTCGGAATCTCA 59.250 50.000 4.18 0.00 0.00 3.27
2873 2952 1.865865 TTAATGCGCCTCGGAATCTC 58.134 50.000 4.18 0.00 0.00 2.75
2874 2953 2.325583 TTTAATGCGCCTCGGAATCT 57.674 45.000 4.18 0.00 0.00 2.40
2875 2954 3.300009 CAATTTAATGCGCCTCGGAATC 58.700 45.455 4.18 0.00 0.00 2.52
2876 2955 2.034558 CCAATTTAATGCGCCTCGGAAT 59.965 45.455 4.18 0.00 0.00 3.01
2877 2956 1.403679 CCAATTTAATGCGCCTCGGAA 59.596 47.619 4.18 0.00 0.00 4.30
2878 2957 1.021202 CCAATTTAATGCGCCTCGGA 58.979 50.000 4.18 0.00 0.00 4.55
2879 2958 0.030638 CCCAATTTAATGCGCCTCGG 59.969 55.000 4.18 0.00 0.00 4.63
2880 2959 0.738389 ACCCAATTTAATGCGCCTCG 59.262 50.000 4.18 0.00 0.00 4.63
2881 2960 1.202405 CCACCCAATTTAATGCGCCTC 60.202 52.381 4.18 0.00 0.00 4.70
2882 2961 0.823460 CCACCCAATTTAATGCGCCT 59.177 50.000 4.18 0.00 0.00 5.52
2883 2962 0.534873 ACCACCCAATTTAATGCGCC 59.465 50.000 4.18 0.00 0.00 6.53
2884 2963 2.378445 AACCACCCAATTTAATGCGC 57.622 45.000 0.00 0.00 0.00 6.09
2885 2964 4.061596 ACAAAACCACCCAATTTAATGCG 58.938 39.130 0.00 0.00 0.00 4.73
2886 2965 7.227711 ACTTTACAAAACCACCCAATTTAATGC 59.772 33.333 0.00 0.00 0.00 3.56
2887 2966 8.669946 ACTTTACAAAACCACCCAATTTAATG 57.330 30.769 0.00 0.00 0.00 1.90
2888 2967 9.767228 GTACTTTACAAAACCACCCAATTTAAT 57.233 29.630 0.00 0.00 0.00 1.40
2889 2968 7.919621 CGTACTTTACAAAACCACCCAATTTAA 59.080 33.333 0.00 0.00 0.00 1.52
2890 2969 7.284034 TCGTACTTTACAAAACCACCCAATTTA 59.716 33.333 0.00 0.00 0.00 1.40
2891 2970 6.096564 TCGTACTTTACAAAACCACCCAATTT 59.903 34.615 0.00 0.00 0.00 1.82
2892 2971 5.593502 TCGTACTTTACAAAACCACCCAATT 59.406 36.000 0.00 0.00 0.00 2.32
2893 2972 5.131784 TCGTACTTTACAAAACCACCCAAT 58.868 37.500 0.00 0.00 0.00 3.16
2894 2973 4.521146 TCGTACTTTACAAAACCACCCAA 58.479 39.130 0.00 0.00 0.00 4.12
2895 2974 4.128643 CTCGTACTTTACAAAACCACCCA 58.871 43.478 0.00 0.00 0.00 4.51
2896 2975 4.379652 TCTCGTACTTTACAAAACCACCC 58.620 43.478 0.00 0.00 0.00 4.61
2897 2976 6.646240 TGTATCTCGTACTTTACAAAACCACC 59.354 38.462 0.00 0.00 34.27 4.61
2898 2977 7.642071 TGTATCTCGTACTTTACAAAACCAC 57.358 36.000 0.00 0.00 34.27 4.16
2899 2978 8.836268 AATGTATCTCGTACTTTACAAAACCA 57.164 30.769 0.00 0.00 34.27 3.67
2900 2979 8.385858 GGAATGTATCTCGTACTTTACAAAACC 58.614 37.037 0.00 0.00 33.54 3.27
2901 2980 9.148104 AGGAATGTATCTCGTACTTTACAAAAC 57.852 33.333 0.00 0.00 35.00 2.43
2902 2981 9.362539 GAGGAATGTATCTCGTACTTTACAAAA 57.637 33.333 0.00 0.00 35.00 2.44
2903 2982 7.977853 GGAGGAATGTATCTCGTACTTTACAAA 59.022 37.037 0.00 0.00 35.00 2.83
2904 2983 7.123098 TGGAGGAATGTATCTCGTACTTTACAA 59.877 37.037 0.00 0.00 35.00 2.41
2905 2984 6.604396 TGGAGGAATGTATCTCGTACTTTACA 59.396 38.462 0.00 0.00 35.00 2.41
2906 2985 6.916932 GTGGAGGAATGTATCTCGTACTTTAC 59.083 42.308 0.00 0.00 33.52 2.01
2907 2986 6.832384 AGTGGAGGAATGTATCTCGTACTTTA 59.168 38.462 0.00 0.00 32.58 1.85
2908 2987 5.657302 AGTGGAGGAATGTATCTCGTACTTT 59.343 40.000 0.00 0.00 34.44 2.66
2909 2988 5.202004 AGTGGAGGAATGTATCTCGTACTT 58.798 41.667 0.00 0.00 34.27 2.24
2910 2989 4.794334 AGTGGAGGAATGTATCTCGTACT 58.206 43.478 0.00 0.00 34.27 2.73
2911 2990 4.579340 TGAGTGGAGGAATGTATCTCGTAC 59.421 45.833 0.00 0.00 0.00 3.67
2912 2991 4.579340 GTGAGTGGAGGAATGTATCTCGTA 59.421 45.833 0.00 0.00 0.00 3.43
2913 2992 3.381908 GTGAGTGGAGGAATGTATCTCGT 59.618 47.826 0.00 0.00 0.00 4.18
2914 2993 3.243569 GGTGAGTGGAGGAATGTATCTCG 60.244 52.174 0.00 0.00 0.00 4.04
2915 2994 3.706594 TGGTGAGTGGAGGAATGTATCTC 59.293 47.826 0.00 0.00 0.00 2.75
2916 2995 3.724478 TGGTGAGTGGAGGAATGTATCT 58.276 45.455 0.00 0.00 0.00 1.98
2917 2996 4.346418 AGATGGTGAGTGGAGGAATGTATC 59.654 45.833 0.00 0.00 0.00 2.24
2918 2997 4.302067 AGATGGTGAGTGGAGGAATGTAT 58.698 43.478 0.00 0.00 0.00 2.29
2919 2998 3.724478 AGATGGTGAGTGGAGGAATGTA 58.276 45.455 0.00 0.00 0.00 2.29
2920 2999 2.555664 AGATGGTGAGTGGAGGAATGT 58.444 47.619 0.00 0.00 0.00 2.71
2921 3000 3.181461 GGTAGATGGTGAGTGGAGGAATG 60.181 52.174 0.00 0.00 0.00 2.67
2922 3001 3.041946 GGTAGATGGTGAGTGGAGGAAT 58.958 50.000 0.00 0.00 0.00 3.01
2923 3002 2.044492 AGGTAGATGGTGAGTGGAGGAA 59.956 50.000 0.00 0.00 0.00 3.36
2924 3003 1.646447 AGGTAGATGGTGAGTGGAGGA 59.354 52.381 0.00 0.00 0.00 3.71
2925 3004 2.166907 AGGTAGATGGTGAGTGGAGG 57.833 55.000 0.00 0.00 0.00 4.30
2926 3005 2.169352 CCAAGGTAGATGGTGAGTGGAG 59.831 54.545 0.00 0.00 33.08 3.86
2927 3006 2.187958 CCAAGGTAGATGGTGAGTGGA 58.812 52.381 0.00 0.00 33.08 4.02
2928 3007 2.698855 CCAAGGTAGATGGTGAGTGG 57.301 55.000 0.00 0.00 33.08 4.00
2935 3014 2.571653 TCTCACCAACCAAGGTAGATGG 59.428 50.000 6.86 6.86 40.77 3.51
2936 3015 3.981071 TCTCACCAACCAAGGTAGATG 57.019 47.619 0.00 0.00 40.77 2.90
2937 3016 5.014123 TGAAATCTCACCAACCAAGGTAGAT 59.986 40.000 0.00 0.00 40.77 1.98
2938 3017 4.349636 TGAAATCTCACCAACCAAGGTAGA 59.650 41.667 0.00 0.00 40.77 2.59
2939 3018 4.651778 TGAAATCTCACCAACCAAGGTAG 58.348 43.478 0.00 0.00 40.77 3.18
2940 3019 4.715534 TGAAATCTCACCAACCAAGGTA 57.284 40.909 0.00 0.00 40.77 3.08
2941 3020 3.593442 TGAAATCTCACCAACCAAGGT 57.407 42.857 0.00 0.00 44.48 3.50
2942 3021 6.780457 AATATGAAATCTCACCAACCAAGG 57.220 37.500 0.00 0.00 33.30 3.61
2943 3022 7.829725 TCAAATATGAAATCTCACCAACCAAG 58.170 34.615 0.00 0.00 33.30 3.61
2944 3023 7.577426 GCTCAAATATGAAATCTCACCAACCAA 60.577 37.037 0.00 0.00 34.49 3.67
2945 3024 6.127647 GCTCAAATATGAAATCTCACCAACCA 60.128 38.462 0.00 0.00 34.49 3.67
2946 3025 6.268566 GCTCAAATATGAAATCTCACCAACC 58.731 40.000 0.00 0.00 34.49 3.77
2947 3026 6.268566 GGCTCAAATATGAAATCTCACCAAC 58.731 40.000 0.00 0.00 34.49 3.77
2948 3027 5.360714 GGGCTCAAATATGAAATCTCACCAA 59.639 40.000 0.00 0.00 34.49 3.67
2949 3028 4.889409 GGGCTCAAATATGAAATCTCACCA 59.111 41.667 0.00 0.00 34.49 4.17
2950 3029 5.136105 AGGGCTCAAATATGAAATCTCACC 58.864 41.667 0.00 0.00 34.49 4.02
2951 3030 7.992754 ATAGGGCTCAAATATGAAATCTCAC 57.007 36.000 0.00 0.00 34.49 3.51
2954 3033 9.301897 GGTTTATAGGGCTCAAATATGAAATCT 57.698 33.333 0.00 0.00 34.49 2.40
2955 3034 8.237267 CGGTTTATAGGGCTCAAATATGAAATC 58.763 37.037 0.00 0.00 34.49 2.17
2956 3035 7.176690 CCGGTTTATAGGGCTCAAATATGAAAT 59.823 37.037 0.00 0.00 34.49 2.17
2957 3036 6.488683 CCGGTTTATAGGGCTCAAATATGAAA 59.511 38.462 0.00 0.00 34.49 2.69
2958 3037 6.001460 CCGGTTTATAGGGCTCAAATATGAA 58.999 40.000 0.00 0.00 34.49 2.57
2959 3038 5.308497 TCCGGTTTATAGGGCTCAAATATGA 59.692 40.000 0.00 0.00 0.00 2.15
2960 3039 5.556915 TCCGGTTTATAGGGCTCAAATATG 58.443 41.667 0.00 0.00 0.00 1.78
2961 3040 5.836024 TCCGGTTTATAGGGCTCAAATAT 57.164 39.130 0.00 0.00 0.00 1.28
2962 3041 5.633655 TTCCGGTTTATAGGGCTCAAATA 57.366 39.130 0.00 0.00 0.00 1.40
2963 3042 4.513406 TTCCGGTTTATAGGGCTCAAAT 57.487 40.909 0.00 0.00 0.00 2.32
2964 3043 4.304048 TTTCCGGTTTATAGGGCTCAAA 57.696 40.909 0.00 0.00 0.00 2.69
2965 3044 4.019141 TCTTTTCCGGTTTATAGGGCTCAA 60.019 41.667 0.00 0.00 0.00 3.02
2966 3045 3.520317 TCTTTTCCGGTTTATAGGGCTCA 59.480 43.478 0.00 0.00 0.00 4.26
2967 3046 4.127907 CTCTTTTCCGGTTTATAGGGCTC 58.872 47.826 0.00 0.00 0.00 4.70
2968 3047 3.118000 CCTCTTTTCCGGTTTATAGGGCT 60.118 47.826 0.00 0.00 0.00 5.19
2969 3048 3.211865 CCTCTTTTCCGGTTTATAGGGC 58.788 50.000 0.00 0.00 0.00 5.19
2970 3049 3.457012 TCCCTCTTTTCCGGTTTATAGGG 59.543 47.826 20.93 20.93 43.23 3.53
2971 3050 4.163649 ACTCCCTCTTTTCCGGTTTATAGG 59.836 45.833 0.00 4.62 0.00 2.57
2972 3051 5.354842 ACTCCCTCTTTTCCGGTTTATAG 57.645 43.478 0.00 0.00 0.00 1.31
2973 3052 7.441903 AATACTCCCTCTTTTCCGGTTTATA 57.558 36.000 0.00 0.00 0.00 0.98
2974 3053 5.970501 ATACTCCCTCTTTTCCGGTTTAT 57.029 39.130 0.00 0.00 0.00 1.40
2975 3054 5.767277 AATACTCCCTCTTTTCCGGTTTA 57.233 39.130 0.00 0.00 0.00 2.01
2976 3055 4.652679 AATACTCCCTCTTTTCCGGTTT 57.347 40.909 0.00 0.00 0.00 3.27
2977 3056 4.652679 AAATACTCCCTCTTTTCCGGTT 57.347 40.909 0.00 0.00 0.00 4.44
2978 3057 4.781621 ACTAAATACTCCCTCTTTTCCGGT 59.218 41.667 0.00 0.00 0.00 5.28
2979 3058 5.354842 ACTAAATACTCCCTCTTTTCCGG 57.645 43.478 0.00 0.00 0.00 5.14
2980 3059 7.683437 AAAACTAAATACTCCCTCTTTTCCG 57.317 36.000 0.00 0.00 0.00 4.30
2981 3060 8.857098 ACAAAAACTAAATACTCCCTCTTTTCC 58.143 33.333 0.00 0.00 0.00 3.13
2982 3061 9.894783 GACAAAAACTAAATACTCCCTCTTTTC 57.105 33.333 0.00 0.00 0.00 2.29
2983 3062 9.642343 AGACAAAAACTAAATACTCCCTCTTTT 57.358 29.630 0.00 0.00 0.00 2.27
2984 3063 9.642343 AAGACAAAAACTAAATACTCCCTCTTT 57.358 29.630 0.00 0.00 0.00 2.52
3002 3081 9.620660 GTCAAAGTTTTGAGACTTAAGACAAAA 57.379 29.630 22.26 22.26 46.80 2.44
3003 3082 9.010029 AGTCAAAGTTTTGAGACTTAAGACAAA 57.990 29.630 10.09 14.37 46.80 2.83
3004 3083 8.561738 AGTCAAAGTTTTGAGACTTAAGACAA 57.438 30.769 10.09 9.50 46.80 3.18
3005 3084 9.661563 TTAGTCAAAGTTTTGAGACTTAAGACA 57.338 29.630 10.09 3.74 46.80 3.41
3006 3085 9.917872 GTTAGTCAAAGTTTTGAGACTTAAGAC 57.082 33.333 10.09 2.62 46.80 3.01
3007 3086 9.886132 AGTTAGTCAAAGTTTTGAGACTTAAGA 57.114 29.630 10.09 0.00 46.80 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.