AutoCloner

Multiple sequence alignment - TraesCS5D01G122200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS5D01G122200	chr5D	100.000	3695	0	0	1	3695	175989978	175993672	0.000000e+00	6824.0
1	TraesCS5D01G122200	chr5D	96.840	886	21	4	2812	3695	511492162	511493042	0.000000e+00	1474.0
2	TraesCS5D01G122200	chr5D	98.101	158	3	0	2751	2908	511492051	511492208	3.630000e-70	276.0
3	TraesCS5D01G122200	chr3B	96.215	1506	56	1	1	1506	167647642	167649146	0.000000e+00	2464.0
4	TraesCS5D01G122200	chr3B	96.448	563	20	0	1503	2065	167660983	167661545	0.000000e+00	929.0
5	TraesCS5D01G122200	chr3B	97.095	482	13	1	2239	2720	167661544	167662024	0.000000e+00	811.0
6	TraesCS5D01G122200	chr3B	97.233	253	7	0	2468	2720	452641553	452641301	2.640000e-116	429.0
7	TraesCS5D01G122200	chr3B	96.680	241	8	0	2480	2720	672026977	672026737	5.750000e-108	401.0
8	TraesCS5D01G122200	chr6A	82.637	2730	453	17	1	2720	495420969	495418251	0.000000e+00	2396.0
9	TraesCS5D01G122200	chr5B	81.855	2728	475	18	1	2720	587434073	587436788	0.000000e+00	2278.0
10	TraesCS5D01G122200	chr5B	93.893	262	14	2	2468	2728	42090263	42090523	9.620000e-106	394.0
11	TraesCS5D01G122200	chr4A	94.529	1115	60	1	952	2065	680324548	680325662	0.000000e+00	1720.0
12	TraesCS5D01G122200	chr4A	94.864	954	48	1	1	954	680314995	680315947	0.000000e+00	1489.0
13	TraesCS5D01G122200	chr4A	95.607	478	21	0	2243	2720	680325665	680326142	0.000000e+00	767.0
14	TraesCS5D01G122200	chr6D	97.178	815	21	2	2882	3695	19229723	19230536	0.000000e+00	1376.0
15	TraesCS5D01G122200	chr6D	96.933	815	20	3	2882	3695	19167399	19168209	0.000000e+00	1362.0
16	TraesCS5D01G122200	chr6D	97.468	158	4	0	2751	2908	19210100	19210257	1.690000e-68	270.0
17	TraesCS5D01G122200	chr6D	96.835	158	5	0	2751	2908	19147915	19148072	7.870000e-67	265.0
18	TraesCS5D01G122200	chr6D	87.838	74	5	1	2812	2885	19210211	19210280	2.360000e-12	84.2
19	TraesCS5D01G122200	chr1A	93.207	898	38	8	2812	3692	553010467	553011358	0.000000e+00	1299.0
20	TraesCS5D01G122200	chr1A	94.558	147	7	1	2763	2908	553010367	553010513	3.710000e-55	226.0
21	TraesCS5D01G122200	chr7A	91.925	904	36	7	2812	3695	17579383	17580269	0.000000e+00	1230.0
22	TraesCS5D01G122200	chr7A	94.326	141	7	1	2768	2908	17579290	17579429	8.040000e-52	215.0
23	TraesCS5D01G122200	chr3A	95.841	553	17	4	3142	3693	670869155	670869702	0.000000e+00	889.0
24	TraesCS5D01G122200	chr3A	93.750	144	7	2	2904	3046	670869008	670869150	8.040000e-52	215.0
25	TraesCS5D01G122200	chr1B	96.047	253	10	0	2468	2720	537191565	537191817	2.660000e-111	412.0
26	TraesCS5D01G122200	chr1B	95.257	253	12	0	2468	2720	362067286	362067034	5.750000e-108	401.0
27	TraesCS5D01G122200	chr1B	97.368	76	2	0	3054	3129	15215916	15215991	2.990000e-26	130.0
28	TraesCS5D01G122200	chr7B	95.436	241	11	0	2480	2720	109418410	109418650	5.790000e-103	385.0
29	TraesCS5D01G122200	chr7B	90.805	87	7	1	3054	3140	115633424	115633509	8.390000e-22	115.0
30	TraesCS5D01G122200	chr7B	90.805	87	7	1	3054	3140	578932632	578932717	8.390000e-22	115.0
31	TraesCS5D01G122200	chrUn	89.362	235	25	0	2	236	102009630	102009864	2.790000e-76	296.0
32	TraesCS5D01G122200	chr2B	92.857	84	5	1	3057	3140	590101422	590101504	1.800000e-23	121.0
33	TraesCS5D01G122200	chr5A	79.231	130	25	2	941	1069	503865898	503865770	5.080000e-14	89.8

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS5D01G122200	chr5D	175989978	175993672	3694	False	6824.0	6824	100.0000	1	3695	1	chr5D.!!$F1	3694
1	TraesCS5D01G122200	chr5D	511492051	511493042	991	False	875.0	1474	97.4705	2751	3695	2	chr5D.!!$F2	944
2	TraesCS5D01G122200	chr3B	167647642	167649146	1504	False	2464.0	2464	96.2150	1	1506	1	chr3B.!!$F1	1505
3	TraesCS5D01G122200	chr3B	167660983	167662024	1041	False	870.0	929	96.7715	1503	2720	2	chr3B.!!$F2	1217
4	TraesCS5D01G122200	chr6A	495418251	495420969	2718	True	2396.0	2396	82.6370	1	2720	1	chr6A.!!$R1	2719
5	TraesCS5D01G122200	chr5B	587434073	587436788	2715	False	2278.0	2278	81.8550	1	2720	1	chr5B.!!$F2	2719
6	TraesCS5D01G122200	chr4A	680314995	680315947	952	False	1489.0	1489	94.8640	1	954	1	chr4A.!!$F1	953
7	TraesCS5D01G122200	chr4A	680324548	680326142	1594	False	1243.5	1720	95.0680	952	2720	2	chr4A.!!$F2	1768
8	TraesCS5D01G122200	chr6D	19229723	19230536	813	False	1376.0	1376	97.1780	2882	3695	1	chr6D.!!$F3	813
9	TraesCS5D01G122200	chr6D	19167399	19168209	810	False	1362.0	1362	96.9330	2882	3695	1	chr6D.!!$F2	813
10	TraesCS5D01G122200	chr1A	553010367	553011358	991	False	762.5	1299	93.8825	2763	3692	2	chr1A.!!$F1	929
11	TraesCS5D01G122200	chr7A	17579290	17580269	979	False	722.5	1230	93.1255	2768	3695	2	chr7A.!!$F1	927
12	TraesCS5D01G122200	chr3A	670869008	670869702	694	False	552.0	889	94.7955	2904	3693	2	chr3A.!!$F1	789

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
607	608	0.607217	CAGATCTGCCCACAAGCACA	60.607	55.000	10.38	0.0	38.00	4.57	F
1501	1502	2.207229	CCAGTCACCGACCAGTGGA	61.207	63.158	18.40	0.0	38.34	4.02	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1984	1986	0.179097	GGAAGCGTCCAGATCTGTCC	60.179	60.0	21.11	15.6	44.26	4.02	R
2726	2728	0.384309	CTGGGTGACGAATAGCGCTA	59.616	55.0	21.30	21.3	46.04	4.26	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
245	246	4.450976	TCACGGATAATGTATTGCTTGCT	58.549	39.130	0.00	0.00	0.00	3.91
449	450	4.221924	TCATACCGAGTGAAAGTGAATGGA	59.778	41.667	0.00	0.00	0.00	3.41
458	459	7.039313	AGTGAAAGTGAATGGAAAACTAACC	57.961	36.000	0.00	0.00	0.00	2.85
607	608	0.607217	CAGATCTGCCCACAAGCACA	60.607	55.000	10.38	0.00	38.00	4.57
927	928	3.262915	AGAAGCATATACAGGGCTGGATC	59.737	47.826	0.00	0.00	38.04	3.36
1325	1326	4.281898	ACACTTGGCGGAGTATTTTACT	57.718	40.909	0.00	0.00	42.86	2.24
1501	1502	2.207229	CCAGTCACCGACCAGTGGA	61.207	63.158	18.40	0.00	38.34	4.02
1562	1563	4.080919	TGCACACTCAATTCTGGCTATACT	60.081	41.667	0.00	0.00	0.00	2.12
1815	1816	6.595682	CCTACCCACAAGACTGAATATCAAT	58.404	40.000	0.00	0.00	0.00	2.57
2001	2003	0.965866	TCGGACAGATCTGGACGCTT	60.966	55.000	26.08	4.23	35.08	4.68
2029	2031	2.949177	TAAACAGGTGCATGTGGTCT	57.051	45.000	0.00	0.00	32.52	3.85
2085	2087	1.335496	GTAAACGCTGGTGAAAAGGCA	59.665	47.619	0.00	0.00	0.00	4.75
2086	2088	0.102300	AAACGCTGGTGAAAAGGCAC	59.898	50.000	0.00	0.00	38.05	5.01
2093	2095	3.445096	GCTGGTGAAAAGGCACTATCAAT	59.555	43.478	0.00	0.00	38.49	2.57
2095	2097	5.389859	TGGTGAAAAGGCACTATCAATTG	57.610	39.130	0.00	0.00	38.49	2.32
2141	2143	3.985127	AGCATTTGATGGATTTCTCCCA	58.015	40.909	0.00	0.00	41.29	4.37
2145	2147	4.886755	TTTGATGGATTTCTCCCAGGAT	57.113	40.909	0.00	0.00	41.29	3.24
2147	2149	3.396565	TGATGGATTTCTCCCAGGATCA	58.603	45.455	0.00	0.00	41.29	2.92
2148	2150	3.787577	TGATGGATTTCTCCCAGGATCAA	59.212	43.478	0.00	0.00	41.29	2.57
2151	2153	5.211078	TGGATTTCTCCCAGGATCAAAAT	57.789	39.130	0.00	0.00	41.29	1.82
2155	2157	7.128728	TGGATTTCTCCCAGGATCAAAATACTA	59.871	37.037	0.00	0.45	41.29	1.82
2157	2159	6.884472	TTCTCCCAGGATCAAAATACTACA	57.116	37.500	0.00	0.00	0.00	2.74
2158	2160	6.485830	TCTCCCAGGATCAAAATACTACAG	57.514	41.667	0.00	0.00	0.00	2.74
2159	2161	5.964477	TCTCCCAGGATCAAAATACTACAGT	59.036	40.000	0.00	0.00	0.00	3.55
2164	2166	7.281100	CCCAGGATCAAAATACTACAGTTTCTC	59.719	40.741	0.00	0.00	0.00	2.87
2165	2167	8.043710	CCAGGATCAAAATACTACAGTTTCTCT	58.956	37.037	0.00	0.00	0.00	3.10
2169	2171	8.854614	ATCAAAATACTACAGTTTCTCTTGCT	57.145	30.769	0.00	0.00	0.00	3.91
2172	2174	6.613153	AATACTACAGTTTCTCTTGCTCCT	57.387	37.500	0.00	0.00	0.00	3.69
2173	2175	4.264460	ACTACAGTTTCTCTTGCTCCTG	57.736	45.455	0.00	0.00	0.00	3.86
2174	2176	3.643792	ACTACAGTTTCTCTTGCTCCTGT	59.356	43.478	0.00	0.00	37.04	4.00
2176	2178	3.209410	ACAGTTTCTCTTGCTCCTGTTG	58.791	45.455	0.00	0.00	29.32	3.33
2180	2182	3.340814	TTCTCTTGCTCCTGTTGATCC	57.659	47.619	0.00	0.00	0.00	3.36
2183	2185	2.235650	CTCTTGCTCCTGTTGATCCTGA	59.764	50.000	0.00	0.00	0.00	3.86
2189	2191	2.169978	CTCCTGTTGATCCTGATGCTCA	59.830	50.000	0.00	0.00	0.00	4.26
2192	2194	3.542648	CTGTTGATCCTGATGCTCATGT	58.457	45.455	0.00	0.00	0.00	3.21
2193	2195	3.945921	CTGTTGATCCTGATGCTCATGTT	59.054	43.478	0.00	0.00	0.00	2.71
2206	2208	0.326595	TCATGTTTGGAAGCCGCCTA	59.673	50.000	0.00	0.00	0.00	3.93
2207	2209	1.173043	CATGTTTGGAAGCCGCCTAA	58.827	50.000	0.00	0.00	0.00	2.69
2208	2210	1.133025	CATGTTTGGAAGCCGCCTAAG	59.867	52.381	0.00	0.00	0.00	2.18
2220	2222	2.860136	GCCGCCTAAGCAAAATTTCATC	59.140	45.455	0.00	0.00	39.83	2.92
2226	2228	7.277539	CCGCCTAAGCAAAATTTCATCAAAATA	59.722	33.333	0.00	0.00	36.16	1.40
2256	2258	1.815408	GCAGCTTTCCTTCAGGACACA	60.815	52.381	0.00	0.00	45.39	3.72
2464	2466	1.078143	GGGGCGCTGAAGTCAAGAT	60.078	57.895	7.64	0.00	0.00	2.40
2610	2612	0.600255	AGTTTGGTCTGAAGGCGTCG	60.600	55.000	0.00	0.00	0.00	5.12
2636	2638	1.559368	TTCACCATTTGGGCAGATGG	58.441	50.000	10.35	10.35	45.62	3.51
2741	2743	9.447040	TTCAATATATATAGCGCTATTCGTCAC	57.553	33.333	33.15	0.00	41.07	3.67
2742	2744	8.074370	TCAATATATATAGCGCTATTCGTCACC	58.926	37.037	33.15	0.00	41.07	4.02
2743	2745	3.505464	ATATAGCGCTATTCGTCACCC	57.495	47.619	33.15	0.00	41.07	4.61
2744	2746	1.037493	ATAGCGCTATTCGTCACCCA	58.963	50.000	24.15	0.00	41.07	4.51
2745	2747	0.384309	TAGCGCTATTCGTCACCCAG	59.616	55.000	14.45	0.00	41.07	4.45
2746	2748	1.883084	GCGCTATTCGTCACCCAGG	60.883	63.158	0.00	0.00	41.07	4.45
2747	2749	1.227263	CGCTATTCGTCACCCAGGG	60.227	63.158	2.85	2.85	0.00	4.45
2748	2750	1.905512	GCTATTCGTCACCCAGGGT	59.094	57.895	4.76	4.76	35.62	4.34
2787	2789	1.244019	GCGTCCAAACCATCCTTGCT	61.244	55.000	0.00	0.00	0.00	3.91
2899	2948	1.771854	TCCAACCACCAGCAAACTAGA	59.228	47.619	0.00	0.00	0.00	2.43
2908	2973	5.003804	CACCAGCAAACTAGACAAGGTAAT	58.996	41.667	0.00	0.00	0.00	1.89
3042	3108	5.048294	GGTGACATTTCCCACGTAAAATTCT	60.048	40.000	0.00	0.00	34.30	2.40
3046	3112	6.443792	ACATTTCCCACGTAAAATTCTTGAC	58.556	36.000	0.00	0.00	0.00	3.18
3052	3118	6.148150	TCCCACGTAAAATTCTTGACACATAC	59.852	38.462	0.00	0.00	0.00	2.39
3203	3269	3.601435	TCACACGTCAGGACAAGAAAAA	58.399	40.909	0.00	0.00	0.00	1.94
3494	3561	7.379059	TCCTTCCTTGATTATAGCAGATTCA	57.621	36.000	0.00	0.00	0.00	2.57

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
245	246	4.141436	TGCATCATGTGGGTGATCTCATAA	60.141	41.667	0.00	0.00	36.72	1.90
449	450	4.581824	GGAAGGAAAACCTCGGTTAGTTTT	59.418	41.667	1.08	0.80	46.11	2.43
905	906	2.694397	TCCAGCCCTGTATATGCTTCT	58.306	47.619	0.00	0.00	31.77	2.85
927	928	1.136224	GCCTTCGAGAGCAGTTTTTCG	60.136	52.381	4.05	0.00	34.56	3.46
1056	1057	1.890894	CTGACTCCACCAGTACCGG	59.109	63.158	0.00	0.00	34.41	5.28
1325	1326	2.039216	TCCTTTAACAGATCACGCCCAA	59.961	45.455	0.00	0.00	0.00	4.12
1501	1502	1.070758	CATACGCACTAGGGCCTCATT	59.929	52.381	10.74	0.00	0.00	2.57
1530	1531	0.615331	TTGAGTGTGCATCCTCCTCC	59.385	55.000	11.67	0.00	0.00	4.30
1815	1816	4.923871	GTGTCAAGCTCGATCTGTTTTCTA	59.076	41.667	0.00	0.00	0.00	2.10
1984	1986	0.179097	GGAAGCGTCCAGATCTGTCC	60.179	60.000	21.11	15.60	44.26	4.02
2001	2003	0.623723	GCACCTGTTTATCCTGGGGA	59.376	55.000	0.00	0.00	35.55	4.81
2029	2031	0.542938	CACCAGTCCCACAGGAGAGA	60.543	60.000	0.00	0.00	45.21	3.10
2085	2087	6.176183	AGCACTAGTTTCAGCAATTGATAGT	58.824	36.000	10.34	0.00	35.27	2.12
2086	2088	6.674694	AGCACTAGTTTCAGCAATTGATAG	57.325	37.500	10.34	0.00	35.27	2.08
2087	2089	7.452880	AAAGCACTAGTTTCAGCAATTGATA	57.547	32.000	10.34	0.00	35.27	2.15
2093	2095	7.229707	TGGTAATAAAAGCACTAGTTTCAGCAA	59.770	33.333	5.79	0.00	0.00	3.91
2095	2097	7.141100	TGGTAATAAAAGCACTAGTTTCAGC	57.859	36.000	0.00	0.00	0.00	4.26
2127	2129	4.443978	TTGATCCTGGGAGAAATCCATC	57.556	45.455	0.00	0.00	33.29	3.51
2128	2130	4.886755	TTTGATCCTGGGAGAAATCCAT	57.113	40.909	0.00	0.00	33.29	3.41
2141	2143	9.442047	CAAGAGAAACTGTAGTATTTTGATCCT	57.558	33.333	0.00	0.00	0.00	3.24
2145	2147	7.387948	GGAGCAAGAGAAACTGTAGTATTTTGA	59.612	37.037	0.00	0.00	0.00	2.69
2147	2149	7.389053	CAGGAGCAAGAGAAACTGTAGTATTTT	59.611	37.037	0.00	0.00	0.00	1.82
2148	2150	6.876257	CAGGAGCAAGAGAAACTGTAGTATTT	59.124	38.462	0.00	0.00	0.00	1.40
2151	2153	4.833380	ACAGGAGCAAGAGAAACTGTAGTA	59.167	41.667	0.00	0.00	37.41	1.82
2155	2157	3.118261	TCAACAGGAGCAAGAGAAACTGT	60.118	43.478	0.00	0.00	40.55	3.55
2157	2159	3.845781	TCAACAGGAGCAAGAGAAACT	57.154	42.857	0.00	0.00	0.00	2.66
2158	2160	3.438434	GGATCAACAGGAGCAAGAGAAAC	59.562	47.826	0.00	0.00	32.12	2.78
2159	2161	3.328931	AGGATCAACAGGAGCAAGAGAAA	59.671	43.478	0.00	0.00	32.12	2.52
2164	2166	2.775911	TCAGGATCAACAGGAGCAAG	57.224	50.000	0.00	0.00	32.12	4.01
2165	2167	2.942752	GCATCAGGATCAACAGGAGCAA	60.943	50.000	0.00	0.00	32.12	3.91
2169	2171	2.190538	TGAGCATCAGGATCAACAGGA	58.809	47.619	0.00	0.00	42.56	3.86
2183	2185	0.813184	CGGCTTCCAAACATGAGCAT	59.187	50.000	0.00	0.00	36.87	3.79
2189	2191	1.463674	CTTAGGCGGCTTCCAAACAT	58.536	50.000	19.76	0.00	0.00	2.71
2192	2194	0.538516	TTGCTTAGGCGGCTTCCAAA	60.539	50.000	19.76	3.94	42.25	3.28
2193	2195	0.538516	TTTGCTTAGGCGGCTTCCAA	60.539	50.000	19.76	15.05	42.25	3.53
2226	2228	5.613329	TGAAGGAAAGCTGCATCAAAATTT	58.387	33.333	1.02	0.00	0.00	1.82
2636	2638	2.555547	GCAACACAGTCAGGGGCAC	61.556	63.158	0.00	0.00	0.00	5.01
2720	2722	5.824097	TGGGTGACGAATAGCGCTATATATA	59.176	40.000	29.20	12.74	46.04	0.86
2721	2723	4.643334	TGGGTGACGAATAGCGCTATATAT	59.357	41.667	29.20	14.93	46.04	0.86
2722	2724	4.011698	TGGGTGACGAATAGCGCTATATA	58.988	43.478	29.20	4.99	46.04	0.86
2723	2725	2.823747	TGGGTGACGAATAGCGCTATAT	59.176	45.455	29.20	18.85	46.04	0.86
2724	2726	2.228103	CTGGGTGACGAATAGCGCTATA	59.772	50.000	29.20	11.48	46.04	1.31
2725	2727	1.000163	CTGGGTGACGAATAGCGCTAT	60.000	52.381	24.15	24.15	46.04	2.97
2726	2728	0.384309	CTGGGTGACGAATAGCGCTA	59.616	55.000	21.30	21.30	46.04	4.26
2727	2729	1.141881	CTGGGTGACGAATAGCGCT	59.858	57.895	17.26	17.26	46.04	5.92
2728	2730	1.883084	CCTGGGTGACGAATAGCGC	60.883	63.158	0.00	0.00	46.04	5.92
2729	2731	1.956629	ACCCTGGGTGACGAATAGCG	61.957	60.000	19.82	0.00	39.57	4.26
2730	2732	1.905512	ACCCTGGGTGACGAATAGC	59.094	57.895	19.82	0.00	32.98	2.97
2747	2749	1.152546	AAAGGGCTGGGGTGAACAC	60.153	57.895	0.00	0.00	0.00	3.32
2748	2750	1.152830	GAAAGGGCTGGGGTGAACA	59.847	57.895	0.00	0.00	0.00	3.18
2749	2751	0.895559	CTGAAAGGGCTGGGGTGAAC	60.896	60.000	0.00	0.00	0.00	3.18
2787	2789	4.148838	CACCCAGGTCCAATTTTCTTACA	58.851	43.478	0.00	0.00	0.00	2.41
2899	2948	9.090692	GTGTGTCGTAATATTACATTACCTTGT	57.909	33.333	22.27	0.00	33.28	3.16
2908	2973	4.142708	ACGTCGGTGTGTCGTAATATTACA	60.143	41.667	22.27	6.00	40.51	2.41
3413	3480	2.916702	TGAGACACTCAACATGTGCT	57.083	45.000	0.00	0.00	37.57	4.40
3441	3508	3.181469	TGTTTGTAAGCGACTTGGAGACT	60.181	43.478	2.86	0.00	0.00	3.24
3494	3561	9.822185	GATTTTATCAGGAAAATGGCAAATAGT	57.178	29.630	0.00	0.00	38.76	2.12

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.