Multiple sequence alignment - TraesCS5D01G122100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G122100 chr5D 100.000 2645 0 0 1 2645 175986145 175988789 0.000000e+00 4885.0
1 TraesCS5D01G122100 chr5D 95.306 490 16 6 124 609 172022309 172021823 0.000000e+00 771.0
2 TraesCS5D01G122100 chr5D 97.297 111 3 0 1 111 171629711 171629821 3.480000e-44 189.0
3 TraesCS5D01G122100 chr5D 97.297 111 3 0 1 111 256864272 256864382 3.480000e-44 189.0
4 TraesCS5D01G122100 chr5D 98.113 53 1 0 628 680 172021838 172021786 2.800000e-15 93.5
5 TraesCS5D01G122100 chr3B 95.851 1422 55 3 1228 2645 167645032 167646453 0.000000e+00 2296.0
6 TraesCS5D01G122100 chr3B 92.048 503 23 6 726 1227 167644476 167644962 0.000000e+00 691.0
7 TraesCS5D01G122100 chr4A 93.018 1418 94 4 1228 2642 680312390 680313805 0.000000e+00 2065.0
8 TraesCS5D01G122100 chr4A 91.259 286 15 2 942 1227 680312045 680312320 5.340000e-102 381.0
9 TraesCS5D01G122100 chr5B 81.965 1425 246 10 1228 2645 587364218 587365638 0.000000e+00 1197.0
10 TraesCS5D01G122100 chr5B 86.286 175 16 6 145 314 624634456 624634627 1.620000e-42 183.0
11 TraesCS5D01G122100 chr5B 86.286 175 16 6 145 314 628228917 628229088 1.620000e-42 183.0
12 TraesCS5D01G122100 chr6A 81.230 1268 204 19 1388 2645 495423400 495422157 0.000000e+00 992.0
13 TraesCS5D01G122100 chr5A 86.222 450 52 8 143 586 141434742 141434297 1.840000e-131 479.0
14 TraesCS5D01G122100 chr3A 85.906 447 48 12 145 586 519225586 519225150 1.850000e-126 462.0
15 TraesCS5D01G122100 chr3A 98.198 111 2 0 1 111 252045525 252045415 7.470000e-46 195.0
16 TraesCS5D01G122100 chr3A 87.591 137 12 4 152 284 353723210 353723345 1.270000e-33 154.0
17 TraesCS5D01G122100 chr1B 85.714 434 42 11 152 582 286869336 286869752 8.690000e-120 440.0
18 TraesCS5D01G122100 chr1B 95.652 46 1 1 2405 2449 466930958 466931003 3.650000e-09 73.1
19 TraesCS5D01G122100 chr7D 98.198 111 2 0 1 111 567904358 567904468 7.470000e-46 195.0
20 TraesCS5D01G122100 chr7D 97.297 111 3 0 1 111 258380394 258380284 3.480000e-44 189.0
21 TraesCS5D01G122100 chr7D 97.297 111 3 0 1 111 481246625 481246515 3.480000e-44 189.0
22 TraesCS5D01G122100 chr7D 84.663 163 15 7 152 309 596046944 596046787 1.270000e-33 154.0
23 TraesCS5D01G122100 chr4D 98.182 110 2 0 2 111 251016667 251016558 2.690000e-45 193.0
24 TraesCS5D01G122100 chr3D 97.297 111 3 0 1 111 120402762 120402872 3.480000e-44 189.0
25 TraesCS5D01G122100 chr3D 97.297 111 3 0 1 111 318777286 318777396 3.480000e-44 189.0
26 TraesCS5D01G122100 chr2B 78.125 256 56 0 2351 2606 198066024 198065769 2.110000e-36 163.0
27 TraesCS5D01G122100 chr2B 86.986 146 13 5 139 280 744491313 744491456 2.730000e-35 159.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G122100 chr5D 175986145 175988789 2644 False 4885.00 4885 100.0000 1 2645 1 chr5D.!!$F2 2644
1 TraesCS5D01G122100 chr5D 172021786 172022309 523 True 432.25 771 96.7095 124 680 2 chr5D.!!$R1 556
2 TraesCS5D01G122100 chr3B 167644476 167646453 1977 False 1493.50 2296 93.9495 726 2645 2 chr3B.!!$F1 1919
3 TraesCS5D01G122100 chr4A 680312045 680313805 1760 False 1223.00 2065 92.1385 942 2642 2 chr4A.!!$F1 1700
4 TraesCS5D01G122100 chr5B 587364218 587365638 1420 False 1197.00 1197 81.9650 1228 2645 1 chr5B.!!$F1 1417
5 TraesCS5D01G122100 chr6A 495422157 495423400 1243 True 992.00 992 81.2300 1388 2645 1 chr6A.!!$R1 1257

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
689 703 0.034337 TACAAGCCCTGAACACCGAC 59.966 55.0 0.0 0.0 0.0 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2083 2170 0.033208 ATTTCCATCCGCACCCACAT 60.033 50.0 0.0 0.0 0.0 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 8.804472 ATTTTAATTTCATTAATTGTTGCGCG 57.196 26.923 0.00 0.00 37.07 6.86
65 66 3.905339 ATTTCATTAATTGTTGCGCGC 57.095 38.095 27.26 27.26 0.00 6.86
66 67 1.254882 TTCATTAATTGTTGCGCGCG 58.745 45.000 28.44 28.44 0.00 6.86
67 68 1.131037 TCATTAATTGTTGCGCGCGC 61.131 50.000 45.02 45.02 42.35 6.86
78 79 2.794981 CGCGCGCAATGTTTCGTT 60.795 55.556 32.61 0.00 0.00 3.85
79 80 2.756340 GCGCGCAATGTTTCGTTG 59.244 55.556 29.10 0.00 33.92 4.10
80 81 2.706123 GCGCGCAATGTTTCGTTGG 61.706 57.895 29.10 0.00 31.70 3.77
81 82 1.082431 CGCGCAATGTTTCGTTGGA 60.082 52.632 8.75 0.00 31.70 3.53
82 83 0.454285 CGCGCAATGTTTCGTTGGAT 60.454 50.000 8.75 0.00 31.70 3.41
83 84 1.696988 GCGCAATGTTTCGTTGGATT 58.303 45.000 0.30 0.00 31.70 3.01
84 85 2.058057 GCGCAATGTTTCGTTGGATTT 58.942 42.857 0.30 0.00 31.70 2.17
85 86 2.474735 GCGCAATGTTTCGTTGGATTTT 59.525 40.909 0.30 0.00 31.70 1.82
86 87 3.059935 GCGCAATGTTTCGTTGGATTTTT 60.060 39.130 0.30 0.00 31.70 1.94
87 88 4.149046 GCGCAATGTTTCGTTGGATTTTTA 59.851 37.500 0.30 0.00 31.70 1.52
88 89 5.595065 CGCAATGTTTCGTTGGATTTTTAC 58.405 37.500 4.29 0.00 31.70 2.01
89 90 5.174035 CGCAATGTTTCGTTGGATTTTTACA 59.826 36.000 4.29 0.00 31.70 2.41
90 91 6.128956 CGCAATGTTTCGTTGGATTTTTACAT 60.129 34.615 4.29 0.00 31.70 2.29
91 92 7.061210 CGCAATGTTTCGTTGGATTTTTACATA 59.939 33.333 4.29 0.00 31.70 2.29
92 93 8.704234 GCAATGTTTCGTTGGATTTTTACATAA 58.296 29.630 4.29 0.00 31.70 1.90
282 296 8.922058 AAGAGTTACGTACAACAATATAGGTG 57.078 34.615 0.00 0.00 0.00 4.00
283 297 6.976925 AGAGTTACGTACAACAATATAGGTGC 59.023 38.462 0.00 0.00 0.00 5.01
284 298 6.044682 AGTTACGTACAACAATATAGGTGCC 58.955 40.000 0.00 0.00 0.00 5.01
285 299 3.800531 ACGTACAACAATATAGGTGCCC 58.199 45.455 0.00 0.00 0.00 5.36
286 300 3.198200 ACGTACAACAATATAGGTGCCCA 59.802 43.478 0.00 0.00 0.00 5.36
287 301 4.141574 ACGTACAACAATATAGGTGCCCAT 60.142 41.667 0.00 0.00 0.00 4.00
288 302 5.070714 ACGTACAACAATATAGGTGCCCATA 59.929 40.000 0.00 0.00 0.00 2.74
289 303 5.637810 CGTACAACAATATAGGTGCCCATAG 59.362 44.000 0.00 0.00 0.00 2.23
290 304 5.904984 ACAACAATATAGGTGCCCATAGA 57.095 39.130 0.00 0.00 0.00 1.98
291 305 5.621193 ACAACAATATAGGTGCCCATAGAC 58.379 41.667 0.00 0.00 0.00 2.59
292 306 5.131977 ACAACAATATAGGTGCCCATAGACA 59.868 40.000 0.00 0.00 0.00 3.41
293 307 5.228945 ACAATATAGGTGCCCATAGACAC 57.771 43.478 0.00 0.00 36.03 3.67
294 308 4.245660 CAATATAGGTGCCCATAGACACG 58.754 47.826 0.00 0.00 37.68 4.49
295 309 1.789523 ATAGGTGCCCATAGACACGT 58.210 50.000 0.00 0.00 37.68 4.49
296 310 1.108776 TAGGTGCCCATAGACACGTC 58.891 55.000 0.00 0.00 37.68 4.34
297 311 0.614979 AGGTGCCCATAGACACGTCT 60.615 55.000 4.87 4.87 43.40 4.18
298 312 0.179108 GGTGCCCATAGACACGTCTC 60.179 60.000 2.26 0.00 40.93 3.36
299 313 0.530744 GTGCCCATAGACACGTCTCA 59.469 55.000 2.26 0.00 40.93 3.27
300 314 1.137086 GTGCCCATAGACACGTCTCAT 59.863 52.381 2.26 0.00 40.93 2.90
301 315 2.361119 GTGCCCATAGACACGTCTCATA 59.639 50.000 2.26 0.00 40.93 2.15
302 316 3.005897 GTGCCCATAGACACGTCTCATAT 59.994 47.826 2.26 0.00 40.93 1.78
303 317 3.005791 TGCCCATAGACACGTCTCATATG 59.994 47.826 2.26 2.51 40.93 1.78
304 318 3.255888 GCCCATAGACACGTCTCATATGA 59.744 47.826 5.07 5.07 40.93 2.15
305 319 4.799678 CCCATAGACACGTCTCATATGAC 58.200 47.826 0.00 0.00 40.93 3.06
306 320 4.278419 CCCATAGACACGTCTCATATGACA 59.722 45.833 0.00 0.00 40.93 3.58
307 321 5.215903 CCATAGACACGTCTCATATGACAC 58.784 45.833 0.00 0.66 40.93 3.67
308 322 3.406728 AGACACGTCTCATATGACACG 57.593 47.619 25.81 25.81 41.22 4.49
310 324 3.937079 AGACACGTCTCATATGACACGTA 59.063 43.478 30.26 0.00 45.32 3.57
311 325 4.012319 ACACGTCTCATATGACACGTAC 57.988 45.455 30.26 11.38 45.32 3.67
312 326 3.437741 ACACGTCTCATATGACACGTACA 59.562 43.478 30.26 0.00 45.32 2.90
313 327 4.083164 ACACGTCTCATATGACACGTACAA 60.083 41.667 30.26 0.00 45.32 2.41
314 328 5.034797 CACGTCTCATATGACACGTACAAT 58.965 41.667 30.26 11.92 45.32 2.71
315 329 5.034797 ACGTCTCATATGACACGTACAATG 58.965 41.667 29.92 7.62 45.27 2.82
316 330 4.441087 CGTCTCATATGACACGTACAATGG 59.559 45.833 21.17 0.48 36.82 3.16
317 331 5.588240 GTCTCATATGACACGTACAATGGA 58.412 41.667 0.00 0.00 36.97 3.41
318 332 5.459107 GTCTCATATGACACGTACAATGGAC 59.541 44.000 0.00 0.00 36.97 4.02
319 333 4.356289 TCATATGACACGTACAATGGACG 58.644 43.478 17.40 17.40 45.75 4.79
320 334 4.096682 TCATATGACACGTACAATGGACGA 59.903 41.667 26.06 1.69 42.98 4.20
321 335 3.520290 ATGACACGTACAATGGACGAT 57.480 42.857 26.06 12.14 42.98 3.73
322 336 2.601804 TGACACGTACAATGGACGATG 58.398 47.619 26.06 19.66 42.98 3.84
323 337 1.323534 GACACGTACAATGGACGATGC 59.676 52.381 26.06 8.86 42.98 3.91
324 338 1.337354 ACACGTACAATGGACGATGCA 60.337 47.619 26.06 0.00 42.98 3.96
325 339 1.729517 CACGTACAATGGACGATGCAA 59.270 47.619 26.06 0.00 42.98 4.08
326 340 2.158645 CACGTACAATGGACGATGCAAA 59.841 45.455 26.06 0.00 42.98 3.68
327 341 2.809119 ACGTACAATGGACGATGCAAAA 59.191 40.909 26.06 0.00 42.98 2.44
328 342 3.251245 ACGTACAATGGACGATGCAAAAA 59.749 39.130 26.06 0.00 42.98 1.94
329 343 3.845775 CGTACAATGGACGATGCAAAAAG 59.154 43.478 13.54 0.00 42.98 2.27
330 344 4.377943 CGTACAATGGACGATGCAAAAAGA 60.378 41.667 13.54 0.00 42.98 2.52
331 345 4.582701 ACAATGGACGATGCAAAAAGAA 57.417 36.364 0.00 0.00 0.00 2.52
332 346 4.942852 ACAATGGACGATGCAAAAAGAAA 58.057 34.783 0.00 0.00 0.00 2.52
333 347 5.355596 ACAATGGACGATGCAAAAAGAAAA 58.644 33.333 0.00 0.00 0.00 2.29
334 348 5.234116 ACAATGGACGATGCAAAAAGAAAAC 59.766 36.000 0.00 0.00 0.00 2.43
335 349 4.647424 TGGACGATGCAAAAAGAAAACT 57.353 36.364 0.00 0.00 0.00 2.66
336 350 5.004922 TGGACGATGCAAAAAGAAAACTT 57.995 34.783 0.00 0.00 0.00 2.66
337 351 5.040635 TGGACGATGCAAAAAGAAAACTTC 58.959 37.500 0.00 0.00 0.00 3.01
338 352 5.040635 GGACGATGCAAAAAGAAAACTTCA 58.959 37.500 0.00 0.00 0.00 3.02
339 353 5.691754 GGACGATGCAAAAAGAAAACTTCAT 59.308 36.000 0.00 0.00 0.00 2.57
340 354 6.129088 GGACGATGCAAAAAGAAAACTTCATC 60.129 38.462 0.00 0.00 0.00 2.92
341 355 5.825484 CGATGCAAAAAGAAAACTTCATCG 58.175 37.500 13.12 13.12 43.48 3.84
342 356 6.991485 GATGCAAAAAGAAAACTTCATCGA 57.009 33.333 0.00 0.00 0.00 3.59
343 357 7.393551 GATGCAAAAAGAAAACTTCATCGAA 57.606 32.000 0.00 0.00 0.00 3.71
344 358 6.567769 TGCAAAAAGAAAACTTCATCGAAC 57.432 33.333 0.00 0.00 0.00 3.95
345 359 6.096036 TGCAAAAAGAAAACTTCATCGAACA 58.904 32.000 0.00 0.00 0.00 3.18
346 360 6.034470 TGCAAAAAGAAAACTTCATCGAACAC 59.966 34.615 0.00 0.00 0.00 3.32
347 361 6.507929 GCAAAAAGAAAACTTCATCGAACACC 60.508 38.462 0.00 0.00 0.00 4.16
348 362 4.830826 AAGAAAACTTCATCGAACACCC 57.169 40.909 0.00 0.00 0.00 4.61
349 363 3.815809 AGAAAACTTCATCGAACACCCA 58.184 40.909 0.00 0.00 0.00 4.51
350 364 4.398319 AGAAAACTTCATCGAACACCCAT 58.602 39.130 0.00 0.00 0.00 4.00
351 365 5.556915 AGAAAACTTCATCGAACACCCATA 58.443 37.500 0.00 0.00 0.00 2.74
352 366 5.643777 AGAAAACTTCATCGAACACCCATAG 59.356 40.000 0.00 0.00 0.00 2.23
353 367 3.543680 ACTTCATCGAACACCCATAGG 57.456 47.619 0.00 0.00 40.04 2.57
354 368 3.104512 ACTTCATCGAACACCCATAGGA 58.895 45.455 0.00 0.00 36.73 2.94
355 369 3.118738 ACTTCATCGAACACCCATAGGAC 60.119 47.826 0.00 0.00 36.73 3.85
356 370 1.407618 TCATCGAACACCCATAGGACG 59.592 52.381 0.00 0.00 36.73 4.79
357 371 1.407618 CATCGAACACCCATAGGACGA 59.592 52.381 0.00 0.00 36.73 4.20
358 372 1.771565 TCGAACACCCATAGGACGAT 58.228 50.000 0.00 0.00 36.73 3.73
359 373 1.679680 TCGAACACCCATAGGACGATC 59.320 52.381 0.00 0.00 36.73 3.69
360 374 1.269621 CGAACACCCATAGGACGATCC 60.270 57.143 0.00 0.00 36.58 3.36
361 375 1.760613 GAACACCCATAGGACGATCCA 59.239 52.381 6.78 0.00 39.61 3.41
362 376 1.874129 ACACCCATAGGACGATCCAA 58.126 50.000 6.78 0.00 39.61 3.53
363 377 1.485066 ACACCCATAGGACGATCCAAC 59.515 52.381 6.78 0.00 39.61 3.77
364 378 1.484653 CACCCATAGGACGATCCAACA 59.515 52.381 6.78 0.00 39.61 3.33
365 379 1.485066 ACCCATAGGACGATCCAACAC 59.515 52.381 6.78 0.00 39.61 3.32
366 380 1.538204 CCCATAGGACGATCCAACACG 60.538 57.143 6.78 0.00 39.61 4.49
367 381 1.136305 CCATAGGACGATCCAACACGT 59.864 52.381 6.78 0.00 45.32 4.49
372 386 2.347630 ACGATCCAACACGTCCTCA 58.652 52.632 0.00 0.00 38.34 3.86
373 387 0.895530 ACGATCCAACACGTCCTCAT 59.104 50.000 0.00 0.00 38.34 2.90
374 388 1.280982 CGATCCAACACGTCCTCATG 58.719 55.000 0.00 0.00 0.00 3.07
375 389 1.404181 CGATCCAACACGTCCTCATGT 60.404 52.381 0.00 0.00 0.00 3.21
376 390 2.271800 GATCCAACACGTCCTCATGTC 58.728 52.381 0.00 0.00 0.00 3.06
377 391 1.338107 TCCAACACGTCCTCATGTCT 58.662 50.000 0.00 0.00 0.00 3.41
378 392 1.691976 TCCAACACGTCCTCATGTCTT 59.308 47.619 0.00 0.00 0.00 3.01
379 393 1.800586 CCAACACGTCCTCATGTCTTG 59.199 52.381 0.00 0.00 0.00 3.02
380 394 1.195448 CAACACGTCCTCATGTCTTGC 59.805 52.381 0.00 0.00 0.00 4.01
381 395 0.392706 ACACGTCCTCATGTCTTGCA 59.607 50.000 0.00 0.00 0.00 4.08
382 396 1.002430 ACACGTCCTCATGTCTTGCAT 59.998 47.619 0.00 0.00 38.60 3.96
383 397 1.662629 CACGTCCTCATGTCTTGCATC 59.337 52.381 0.00 0.00 35.19 3.91
384 398 1.293924 CGTCCTCATGTCTTGCATCC 58.706 55.000 0.00 0.00 35.19 3.51
385 399 1.405933 CGTCCTCATGTCTTGCATCCA 60.406 52.381 0.00 0.00 35.19 3.41
386 400 2.744166 CGTCCTCATGTCTTGCATCCAT 60.744 50.000 0.00 0.00 35.19 3.41
387 401 3.285484 GTCCTCATGTCTTGCATCCATT 58.715 45.455 0.00 0.00 35.19 3.16
388 402 4.454678 GTCCTCATGTCTTGCATCCATTA 58.545 43.478 0.00 0.00 35.19 1.90
389 403 4.514441 GTCCTCATGTCTTGCATCCATTAG 59.486 45.833 0.00 0.00 35.19 1.73
390 404 4.409901 TCCTCATGTCTTGCATCCATTAGA 59.590 41.667 0.00 0.00 35.19 2.10
391 405 5.104402 TCCTCATGTCTTGCATCCATTAGAA 60.104 40.000 0.00 0.00 35.19 2.10
392 406 5.238868 CCTCATGTCTTGCATCCATTAGAAG 59.761 44.000 0.00 0.00 35.19 2.85
393 407 4.577693 TCATGTCTTGCATCCATTAGAAGC 59.422 41.667 0.00 0.00 39.69 3.86
394 408 3.954200 TGTCTTGCATCCATTAGAAGCA 58.046 40.909 0.00 0.00 46.95 3.91
399 413 3.966979 TGCATCCATTAGAAGCAAAGGA 58.033 40.909 0.00 0.00 45.71 3.36
400 414 4.539726 TGCATCCATTAGAAGCAAAGGAT 58.460 39.130 0.00 0.00 45.71 3.24
401 415 4.340097 TGCATCCATTAGAAGCAAAGGATG 59.660 41.667 13.41 13.41 45.71 3.51
407 421 8.400184 TCCATTAGAAGCAAAGGATGAATATG 57.600 34.615 0.00 0.00 0.00 1.78
408 422 8.000709 TCCATTAGAAGCAAAGGATGAATATGT 58.999 33.333 0.00 0.00 0.00 2.29
409 423 8.295288 CCATTAGAAGCAAAGGATGAATATGTC 58.705 37.037 0.00 0.00 0.00 3.06
410 424 7.807977 TTAGAAGCAAAGGATGAATATGTCC 57.192 36.000 0.00 0.00 34.64 4.02
411 425 5.136105 AGAAGCAAAGGATGAATATGTCCC 58.864 41.667 0.00 0.00 35.00 4.46
412 426 4.803329 AGCAAAGGATGAATATGTCCCT 57.197 40.909 0.00 0.00 35.00 4.20
413 427 5.912149 AGCAAAGGATGAATATGTCCCTA 57.088 39.130 0.00 0.00 35.00 3.53
414 428 6.460103 AGCAAAGGATGAATATGTCCCTAT 57.540 37.500 0.00 0.00 35.00 2.57
415 429 7.574021 AGCAAAGGATGAATATGTCCCTATA 57.426 36.000 0.00 0.00 35.00 1.31
416 430 7.988937 AGCAAAGGATGAATATGTCCCTATAA 58.011 34.615 0.00 0.00 35.00 0.98
417 431 8.618385 AGCAAAGGATGAATATGTCCCTATAAT 58.382 33.333 0.00 0.00 35.00 1.28
418 432 9.905713 GCAAAGGATGAATATGTCCCTATAATA 57.094 33.333 0.00 0.00 35.00 0.98
446 460 8.740123 AATAATAAATCATACACGGTCCAACA 57.260 30.769 0.00 0.00 0.00 3.33
447 461 8.918202 ATAATAAATCATACACGGTCCAACAT 57.082 30.769 0.00 0.00 0.00 2.71
448 462 4.963276 AAATCATACACGGTCCAACATG 57.037 40.909 0.00 0.00 0.00 3.21
449 463 3.627395 ATCATACACGGTCCAACATGT 57.373 42.857 0.00 0.00 0.00 3.21
450 464 2.967362 TCATACACGGTCCAACATGTC 58.033 47.619 0.00 0.00 0.00 3.06
451 465 1.658596 CATACACGGTCCAACATGTCG 59.341 52.381 0.00 0.00 0.00 4.35
452 466 0.960286 TACACGGTCCAACATGTCGA 59.040 50.000 10.46 1.47 0.00 4.20
453 467 0.105224 ACACGGTCCAACATGTCGAA 59.895 50.000 10.46 0.00 0.00 3.71
454 468 0.790207 CACGGTCCAACATGTCGAAG 59.210 55.000 10.46 4.96 0.00 3.79
455 469 0.391597 ACGGTCCAACATGTCGAAGT 59.608 50.000 10.46 5.49 0.00 3.01
456 470 0.790207 CGGTCCAACATGTCGAAGTG 59.210 55.000 0.00 0.00 0.00 3.16
457 471 1.872237 CGGTCCAACATGTCGAAGTGT 60.872 52.381 0.00 0.00 0.00 3.55
458 472 2.218603 GGTCCAACATGTCGAAGTGTT 58.781 47.619 0.00 10.04 39.00 3.32
459 473 2.223377 GGTCCAACATGTCGAAGTGTTC 59.777 50.000 12.29 4.10 36.48 3.18
471 485 3.537793 GAAGTGTTCGACATGGAAACC 57.462 47.619 0.00 0.00 0.00 3.27
472 486 1.892209 AGTGTTCGACATGGAAACCC 58.108 50.000 0.00 0.00 0.00 4.11
473 487 1.142060 AGTGTTCGACATGGAAACCCA 59.858 47.619 0.00 0.00 38.24 4.51
474 488 1.950909 GTGTTCGACATGGAAACCCAA 59.049 47.619 0.00 0.00 37.24 4.12
475 489 2.359531 GTGTTCGACATGGAAACCCAAA 59.640 45.455 0.00 0.00 37.24 3.28
476 490 2.621055 TGTTCGACATGGAAACCCAAAG 59.379 45.455 0.00 0.00 37.24 2.77
477 491 2.882137 GTTCGACATGGAAACCCAAAGA 59.118 45.455 0.00 0.00 37.24 2.52
478 492 2.778299 TCGACATGGAAACCCAAAGAG 58.222 47.619 0.00 0.00 37.24 2.85
479 493 2.370519 TCGACATGGAAACCCAAAGAGA 59.629 45.455 0.00 0.00 37.24 3.10
480 494 2.484264 CGACATGGAAACCCAAAGAGAC 59.516 50.000 0.00 0.00 37.24 3.36
481 495 3.486383 GACATGGAAACCCAAAGAGACA 58.514 45.455 0.00 0.00 37.24 3.41
482 496 3.888930 GACATGGAAACCCAAAGAGACAA 59.111 43.478 0.00 0.00 37.24 3.18
483 497 4.285863 ACATGGAAACCCAAAGAGACAAA 58.714 39.130 0.00 0.00 37.24 2.83
484 498 4.342092 ACATGGAAACCCAAAGAGACAAAG 59.658 41.667 0.00 0.00 37.24 2.77
485 499 4.243793 TGGAAACCCAAAGAGACAAAGA 57.756 40.909 0.00 0.00 0.00 2.52
486 500 4.605183 TGGAAACCCAAAGAGACAAAGAA 58.395 39.130 0.00 0.00 0.00 2.52
487 501 5.208121 TGGAAACCCAAAGAGACAAAGAAT 58.792 37.500 0.00 0.00 0.00 2.40
488 502 5.068987 TGGAAACCCAAAGAGACAAAGAATG 59.931 40.000 0.00 0.00 0.00 2.67
489 503 8.566057 ATGGAAACCCAAAGAGACAAAGAATGT 61.566 37.037 0.00 0.00 40.41 2.71
504 518 4.615901 TGTCACGACATGATGGCC 57.384 55.556 0.00 0.00 40.28 5.36
505 519 1.447663 TGTCACGACATGATGGCCG 60.448 57.895 0.00 7.70 40.28 6.13
506 520 1.153647 GTCACGACATGATGGCCGA 60.154 57.895 14.49 0.00 40.28 5.54
507 521 0.739462 GTCACGACATGATGGCCGAA 60.739 55.000 14.49 2.23 40.28 4.30
508 522 0.739462 TCACGACATGATGGCCGAAC 60.739 55.000 14.49 0.00 29.99 3.95
509 523 1.018752 CACGACATGATGGCCGAACA 61.019 55.000 14.49 0.00 0.00 3.18
510 524 0.321210 ACGACATGATGGCCGAACAA 60.321 50.000 14.49 0.00 0.00 2.83
511 525 0.801872 CGACATGATGGCCGAACAAA 59.198 50.000 0.00 0.00 0.00 2.83
512 526 1.198867 CGACATGATGGCCGAACAAAA 59.801 47.619 0.00 0.00 0.00 2.44
513 527 2.351253 CGACATGATGGCCGAACAAAAA 60.351 45.455 0.00 0.00 0.00 1.94
514 528 2.986479 GACATGATGGCCGAACAAAAAC 59.014 45.455 0.00 0.00 0.00 2.43
515 529 2.363680 ACATGATGGCCGAACAAAAACA 59.636 40.909 0.00 0.00 0.00 2.83
516 530 2.791383 TGATGGCCGAACAAAAACAG 57.209 45.000 0.00 0.00 0.00 3.16
517 531 2.302260 TGATGGCCGAACAAAAACAGA 58.698 42.857 0.00 0.00 0.00 3.41
518 532 2.034053 TGATGGCCGAACAAAAACAGAC 59.966 45.455 0.00 0.00 0.00 3.51
519 533 1.464734 TGGCCGAACAAAAACAGACA 58.535 45.000 0.00 0.00 0.00 3.41
520 534 1.819288 TGGCCGAACAAAAACAGACAA 59.181 42.857 0.00 0.00 0.00 3.18
521 535 2.159310 TGGCCGAACAAAAACAGACAAG 60.159 45.455 0.00 0.00 0.00 3.16
522 536 2.459934 GCCGAACAAAAACAGACAAGG 58.540 47.619 0.00 0.00 0.00 3.61
523 537 2.098443 GCCGAACAAAAACAGACAAGGA 59.902 45.455 0.00 0.00 0.00 3.36
524 538 3.691498 CCGAACAAAAACAGACAAGGAC 58.309 45.455 0.00 0.00 0.00 3.85
525 539 3.127895 CCGAACAAAAACAGACAAGGACA 59.872 43.478 0.00 0.00 0.00 4.02
526 540 4.095610 CGAACAAAAACAGACAAGGACAC 58.904 43.478 0.00 0.00 0.00 3.67
527 541 4.378978 CGAACAAAAACAGACAAGGACACA 60.379 41.667 0.00 0.00 0.00 3.72
528 542 5.650543 GAACAAAAACAGACAAGGACACAT 58.349 37.500 0.00 0.00 0.00 3.21
529 543 6.457663 CGAACAAAAACAGACAAGGACACATA 60.458 38.462 0.00 0.00 0.00 2.29
530 544 6.959639 ACAAAAACAGACAAGGACACATAT 57.040 33.333 0.00 0.00 0.00 1.78
531 545 8.458573 AACAAAAACAGACAAGGACACATATA 57.541 30.769 0.00 0.00 0.00 0.86
532 546 8.099364 ACAAAAACAGACAAGGACACATATAG 57.901 34.615 0.00 0.00 0.00 1.31
533 547 7.936847 ACAAAAACAGACAAGGACACATATAGA 59.063 33.333 0.00 0.00 0.00 1.98
534 548 8.950210 CAAAAACAGACAAGGACACATATAGAT 58.050 33.333 0.00 0.00 0.00 1.98
536 550 9.601217 AAAACAGACAAGGACACATATAGATAC 57.399 33.333 0.00 0.00 0.00 2.24
537 551 7.898014 ACAGACAAGGACACATATAGATACA 57.102 36.000 0.00 0.00 0.00 2.29
538 552 8.484214 ACAGACAAGGACACATATAGATACAT 57.516 34.615 0.00 0.00 0.00 2.29
539 553 8.363390 ACAGACAAGGACACATATAGATACATG 58.637 37.037 0.00 0.00 0.00 3.21
540 554 7.330454 CAGACAAGGACACATATAGATACATGC 59.670 40.741 0.00 0.00 0.00 4.06
541 555 7.015584 AGACAAGGACACATATAGATACATGCA 59.984 37.037 0.00 0.00 0.00 3.96
542 556 7.508687 ACAAGGACACATATAGATACATGCAA 58.491 34.615 0.00 0.00 0.00 4.08
543 557 7.992608 ACAAGGACACATATAGATACATGCAAA 59.007 33.333 0.00 0.00 0.00 3.68
544 558 9.006839 CAAGGACACATATAGATACATGCAAAT 57.993 33.333 0.00 0.00 0.00 2.32
546 560 9.881649 AGGACACATATAGATACATGCAAATAG 57.118 33.333 0.00 0.00 0.00 1.73
547 561 9.102757 GGACACATATAGATACATGCAAATAGG 57.897 37.037 0.00 0.00 0.00 2.57
548 562 9.875691 GACACATATAGATACATGCAAATAGGA 57.124 33.333 0.00 0.00 0.00 2.94
549 563 9.658799 ACACATATAGATACATGCAAATAGGAC 57.341 33.333 0.00 0.00 0.00 3.85
550 564 8.811378 CACATATAGATACATGCAAATAGGACG 58.189 37.037 0.00 0.00 0.00 4.79
551 565 8.749354 ACATATAGATACATGCAAATAGGACGA 58.251 33.333 0.00 0.00 0.00 4.20
552 566 9.242477 CATATAGATACATGCAAATAGGACGAG 57.758 37.037 0.00 0.00 0.00 4.18
553 567 4.887748 AGATACATGCAAATAGGACGAGG 58.112 43.478 0.00 0.00 0.00 4.63
554 568 4.588951 AGATACATGCAAATAGGACGAGGA 59.411 41.667 0.00 0.00 0.00 3.71
555 569 3.627395 ACATGCAAATAGGACGAGGAA 57.373 42.857 0.00 0.00 0.00 3.36
556 570 3.950397 ACATGCAAATAGGACGAGGAAA 58.050 40.909 0.00 0.00 0.00 3.13
557 571 3.689649 ACATGCAAATAGGACGAGGAAAC 59.310 43.478 0.00 0.00 0.00 2.78
570 584 1.680338 AGGAAACTCAACACTGTGCC 58.320 50.000 7.90 0.00 32.90 5.01
571 585 0.307760 GGAAACTCAACACTGTGCCG 59.692 55.000 7.90 0.00 0.00 5.69
572 586 0.307760 GAAACTCAACACTGTGCCGG 59.692 55.000 7.90 0.00 0.00 6.13
573 587 1.724582 AAACTCAACACTGTGCCGGC 61.725 55.000 22.73 22.73 0.00 6.13
574 588 2.281070 CTCAACACTGTGCCGGCT 60.281 61.111 29.70 3.37 0.00 5.52
575 589 1.005037 CTCAACACTGTGCCGGCTA 60.005 57.895 29.70 15.92 0.00 3.93
576 590 1.291877 CTCAACACTGTGCCGGCTAC 61.292 60.000 29.70 23.15 0.00 3.58
577 591 1.596752 CAACACTGTGCCGGCTACA 60.597 57.895 29.70 26.23 0.00 2.74
578 592 1.147376 AACACTGTGCCGGCTACAA 59.853 52.632 29.70 3.37 0.00 2.41
579 593 1.164041 AACACTGTGCCGGCTACAAC 61.164 55.000 29.70 18.10 0.00 3.32
580 594 1.596752 CACTGTGCCGGCTACAACA 60.597 57.895 29.70 21.90 0.00 3.33
581 595 1.301716 ACTGTGCCGGCTACAACAG 60.302 57.895 31.97 31.97 0.00 3.16
593 607 4.402056 GCTACAACAGCCTATACCTCAA 57.598 45.455 0.00 0.00 45.23 3.02
594 608 4.120589 GCTACAACAGCCTATACCTCAAC 58.879 47.826 0.00 0.00 45.23 3.18
595 609 4.382685 GCTACAACAGCCTATACCTCAACA 60.383 45.833 0.00 0.00 45.23 3.33
596 610 3.939066 ACAACAGCCTATACCTCAACAC 58.061 45.455 0.00 0.00 0.00 3.32
597 611 2.930040 CAACAGCCTATACCTCAACACG 59.070 50.000 0.00 0.00 0.00 4.49
598 612 2.453521 ACAGCCTATACCTCAACACGA 58.546 47.619 0.00 0.00 0.00 4.35
599 613 3.031736 ACAGCCTATACCTCAACACGAT 58.968 45.455 0.00 0.00 0.00 3.73
600 614 3.181475 ACAGCCTATACCTCAACACGATG 60.181 47.826 0.00 0.00 0.00 3.84
601 615 3.031736 AGCCTATACCTCAACACGATGT 58.968 45.455 0.00 0.00 0.00 3.06
602 616 3.068307 AGCCTATACCTCAACACGATGTC 59.932 47.826 0.00 0.00 0.00 3.06
603 617 3.068307 GCCTATACCTCAACACGATGTCT 59.932 47.826 0.00 0.00 0.00 3.41
604 618 4.611943 CCTATACCTCAACACGATGTCTG 58.388 47.826 0.00 0.00 0.00 3.51
605 619 2.363788 TACCTCAACACGATGTCTGC 57.636 50.000 0.00 0.00 0.00 4.26
606 620 0.681733 ACCTCAACACGATGTCTGCT 59.318 50.000 0.00 0.00 0.00 4.24
607 621 1.893137 ACCTCAACACGATGTCTGCTA 59.107 47.619 0.00 0.00 0.00 3.49
608 622 2.263077 CCTCAACACGATGTCTGCTAC 58.737 52.381 0.00 0.00 0.00 3.58
609 623 2.094494 CCTCAACACGATGTCTGCTACT 60.094 50.000 0.00 0.00 0.00 2.57
610 624 3.175152 CTCAACACGATGTCTGCTACTC 58.825 50.000 0.00 0.00 0.00 2.59
611 625 2.094700 TCAACACGATGTCTGCTACTCC 60.095 50.000 0.00 0.00 0.00 3.85
612 626 0.818296 ACACGATGTCTGCTACTCCC 59.182 55.000 0.00 0.00 0.00 4.30
613 627 0.103208 CACGATGTCTGCTACTCCCC 59.897 60.000 0.00 0.00 0.00 4.81
614 628 1.360551 CGATGTCTGCTACTCCCCG 59.639 63.158 0.00 0.00 0.00 5.73
615 629 1.068250 GATGTCTGCTACTCCCCGC 59.932 63.158 0.00 0.00 0.00 6.13
616 630 1.676678 GATGTCTGCTACTCCCCGCA 61.677 60.000 0.00 0.00 34.54 5.69
617 631 1.264749 ATGTCTGCTACTCCCCGCAA 61.265 55.000 0.00 0.00 35.46 4.85
618 632 1.295423 GTCTGCTACTCCCCGCAAA 59.705 57.895 0.00 0.00 35.46 3.68
619 633 0.321298 GTCTGCTACTCCCCGCAAAA 60.321 55.000 0.00 0.00 35.46 2.44
620 634 0.398696 TCTGCTACTCCCCGCAAAAA 59.601 50.000 0.00 0.00 35.46 1.94
642 656 4.468095 AAAAACACACGATGTCTGCTAC 57.532 40.909 0.00 0.00 42.31 3.58
643 657 2.812358 AACACACGATGTCTGCTACA 57.188 45.000 0.00 0.00 42.31 2.74
644 658 2.812358 ACACACGATGTCTGCTACAA 57.188 45.000 0.00 0.00 42.70 2.41
645 659 3.319137 ACACACGATGTCTGCTACAAT 57.681 42.857 0.00 0.00 42.70 2.71
646 660 4.450082 ACACACGATGTCTGCTACAATA 57.550 40.909 0.00 0.00 42.70 1.90
647 661 4.424626 ACACACGATGTCTGCTACAATAG 58.575 43.478 0.00 0.00 42.70 1.73
648 662 3.798878 CACACGATGTCTGCTACAATAGG 59.201 47.826 0.00 0.00 42.70 2.57
649 663 2.797156 CACGATGTCTGCTACAATAGGC 59.203 50.000 0.00 0.00 42.70 3.93
650 664 2.695666 ACGATGTCTGCTACAATAGGCT 59.304 45.455 0.00 0.00 42.70 4.58
651 665 3.889538 ACGATGTCTGCTACAATAGGCTA 59.110 43.478 0.00 0.00 42.70 3.93
652 666 4.022762 ACGATGTCTGCTACAATAGGCTAG 60.023 45.833 0.00 0.00 42.70 3.42
653 667 3.735237 TGTCTGCTACAATAGGCTAGC 57.265 47.619 6.04 6.04 34.29 3.42
654 668 2.365617 TGTCTGCTACAATAGGCTAGCC 59.634 50.000 27.19 27.19 35.45 3.93
655 669 2.365617 GTCTGCTACAATAGGCTAGCCA 59.634 50.000 34.70 20.88 35.45 4.75
656 670 3.038280 TCTGCTACAATAGGCTAGCCAA 58.962 45.455 34.70 11.92 35.45 4.52
657 671 3.454447 TCTGCTACAATAGGCTAGCCAAA 59.546 43.478 34.70 22.65 35.45 3.28
658 672 3.541632 TGCTACAATAGGCTAGCCAAAC 58.458 45.455 34.70 15.05 35.45 2.93
659 673 2.879026 GCTACAATAGGCTAGCCAAACC 59.121 50.000 34.70 8.24 38.92 3.27
660 674 3.684413 GCTACAATAGGCTAGCCAAACCA 60.684 47.826 34.70 14.66 38.92 3.67
661 675 3.449746 ACAATAGGCTAGCCAAACCAA 57.550 42.857 34.70 13.21 38.92 3.67
662 676 3.089284 ACAATAGGCTAGCCAAACCAAC 58.911 45.455 34.70 5.86 38.92 3.77
663 677 2.427095 CAATAGGCTAGCCAAACCAACC 59.573 50.000 34.70 5.08 38.92 3.77
664 678 1.068948 TAGGCTAGCCAAACCAACCA 58.931 50.000 34.70 5.81 38.92 3.67
665 679 0.187361 AGGCTAGCCAAACCAACCAA 59.813 50.000 34.70 0.00 38.92 3.67
666 680 1.203174 AGGCTAGCCAAACCAACCAAT 60.203 47.619 34.70 7.25 38.92 3.16
667 681 2.042433 AGGCTAGCCAAACCAACCAATA 59.958 45.455 34.70 0.00 38.92 1.90
668 682 3.031013 GGCTAGCCAAACCAACCAATAT 58.969 45.455 29.33 0.00 35.81 1.28
669 683 4.079443 AGGCTAGCCAAACCAACCAATATA 60.079 41.667 34.70 0.00 38.92 0.86
670 684 4.832823 GGCTAGCCAAACCAACCAATATAT 59.167 41.667 29.33 0.00 35.81 0.86
671 685 6.007703 GGCTAGCCAAACCAACCAATATATA 58.992 40.000 29.33 0.00 35.81 0.86
672 686 6.072119 GGCTAGCCAAACCAACCAATATATAC 60.072 42.308 29.33 0.00 35.81 1.47
673 687 6.488683 GCTAGCCAAACCAACCAATATATACA 59.511 38.462 2.29 0.00 0.00 2.29
674 688 7.013846 GCTAGCCAAACCAACCAATATATACAA 59.986 37.037 2.29 0.00 0.00 2.41
675 689 7.346751 AGCCAAACCAACCAATATATACAAG 57.653 36.000 0.00 0.00 0.00 3.16
676 690 5.983118 GCCAAACCAACCAATATATACAAGC 59.017 40.000 0.00 0.00 0.00 4.01
677 691 6.512297 CCAAACCAACCAATATATACAAGCC 58.488 40.000 0.00 0.00 0.00 4.35
678 692 6.462347 CCAAACCAACCAATATATACAAGCCC 60.462 42.308 0.00 0.00 0.00 5.19
679 693 5.663158 ACCAACCAATATATACAAGCCCT 57.337 39.130 0.00 0.00 0.00 5.19
680 694 5.385198 ACCAACCAATATATACAAGCCCTG 58.615 41.667 0.00 0.00 0.00 4.45
681 695 5.133660 ACCAACCAATATATACAAGCCCTGA 59.866 40.000 0.00 0.00 0.00 3.86
682 696 6.068010 CCAACCAATATATACAAGCCCTGAA 58.932 40.000 0.00 0.00 0.00 3.02
683 697 6.016276 CCAACCAATATATACAAGCCCTGAAC 60.016 42.308 0.00 0.00 0.00 3.18
684 698 6.260700 ACCAATATATACAAGCCCTGAACA 57.739 37.500 0.00 0.00 0.00 3.18
685 699 6.062095 ACCAATATATACAAGCCCTGAACAC 58.938 40.000 0.00 0.00 0.00 3.32
686 700 5.473504 CCAATATATACAAGCCCTGAACACC 59.526 44.000 0.00 0.00 0.00 4.16
687 701 2.684001 TATACAAGCCCTGAACACCG 57.316 50.000 0.00 0.00 0.00 4.94
688 702 0.981183 ATACAAGCCCTGAACACCGA 59.019 50.000 0.00 0.00 0.00 4.69
689 703 0.034337 TACAAGCCCTGAACACCGAC 59.966 55.000 0.00 0.00 0.00 4.79
690 704 2.030562 AAGCCCTGAACACCGACG 59.969 61.111 0.00 0.00 0.00 5.12
691 705 4.681978 AGCCCTGAACACCGACGC 62.682 66.667 0.00 0.00 0.00 5.19
692 706 4.980805 GCCCTGAACACCGACGCA 62.981 66.667 0.00 0.00 0.00 5.24
693 707 2.047274 CCCTGAACACCGACGCAT 60.047 61.111 0.00 0.00 0.00 4.73
694 708 1.216977 CCCTGAACACCGACGCATA 59.783 57.895 0.00 0.00 0.00 3.14
695 709 0.179084 CCCTGAACACCGACGCATAT 60.179 55.000 0.00 0.00 0.00 1.78
696 710 1.209128 CCTGAACACCGACGCATATC 58.791 55.000 0.00 0.00 0.00 1.63
697 711 1.209128 CTGAACACCGACGCATATCC 58.791 55.000 0.00 0.00 0.00 2.59
698 712 0.533032 TGAACACCGACGCATATCCA 59.467 50.000 0.00 0.00 0.00 3.41
699 713 1.066787 TGAACACCGACGCATATCCAA 60.067 47.619 0.00 0.00 0.00 3.53
700 714 1.326548 GAACACCGACGCATATCCAAC 59.673 52.381 0.00 0.00 0.00 3.77
701 715 0.535335 ACACCGACGCATATCCAACT 59.465 50.000 0.00 0.00 0.00 3.16
702 716 0.930310 CACCGACGCATATCCAACTG 59.070 55.000 0.00 0.00 0.00 3.16
703 717 0.535335 ACCGACGCATATCCAACTGT 59.465 50.000 0.00 0.00 0.00 3.55
704 718 1.752498 ACCGACGCATATCCAACTGTA 59.248 47.619 0.00 0.00 0.00 2.74
705 719 2.124903 CCGACGCATATCCAACTGTAC 58.875 52.381 0.00 0.00 0.00 2.90
706 720 2.480587 CCGACGCATATCCAACTGTACA 60.481 50.000 0.00 0.00 0.00 2.90
707 721 2.789339 CGACGCATATCCAACTGTACAG 59.211 50.000 21.44 21.44 0.00 2.74
708 722 3.123804 GACGCATATCCAACTGTACAGG 58.876 50.000 26.12 10.46 0.00 4.00
709 723 1.867233 CGCATATCCAACTGTACAGGC 59.133 52.381 26.12 15.52 0.00 4.85
710 724 2.222027 GCATATCCAACTGTACAGGCC 58.778 52.381 26.12 0.00 0.00 5.19
711 725 2.483876 CATATCCAACTGTACAGGCCG 58.516 52.381 26.12 13.57 0.00 6.13
712 726 1.855295 TATCCAACTGTACAGGCCGA 58.145 50.000 26.12 17.07 0.00 5.54
713 727 0.981183 ATCCAACTGTACAGGCCGAA 59.019 50.000 26.12 8.52 0.00 4.30
714 728 0.034337 TCCAACTGTACAGGCCGAAC 59.966 55.000 26.12 0.00 0.00 3.95
715 729 0.250124 CCAACTGTACAGGCCGAACA 60.250 55.000 26.12 2.03 0.00 3.18
716 730 1.588674 CAACTGTACAGGCCGAACAA 58.411 50.000 26.12 0.00 0.00 2.83
717 731 1.263217 CAACTGTACAGGCCGAACAAC 59.737 52.381 26.12 0.00 0.00 3.32
718 732 0.599204 ACTGTACAGGCCGAACAACG 60.599 55.000 26.12 0.00 42.18 4.10
719 733 0.319211 CTGTACAGGCCGAACAACGA 60.319 55.000 15.49 0.00 45.77 3.85
720 734 0.598158 TGTACAGGCCGAACAACGAC 60.598 55.000 0.00 0.00 45.77 4.34
721 735 1.005867 TACAGGCCGAACAACGACC 60.006 57.895 0.00 0.00 44.70 4.79
724 738 2.662527 GGCCGAACAACGACCGAA 60.663 61.111 0.00 0.00 45.77 4.30
729 743 1.602877 CGAACAACGACCGAAGTCCG 61.603 60.000 0.00 0.00 45.77 4.79
760 774 1.215647 CGGTGTGGTCTCCTGTAGC 59.784 63.158 0.00 0.00 0.00 3.58
763 777 0.109226 GTGTGGTCTCCTGTAGCGAC 60.109 60.000 0.00 0.00 0.00 5.19
766 780 1.303799 TGGTCTCCTGTAGCGACGAC 61.304 60.000 0.00 0.00 0.00 4.34
777 791 2.126071 CGACGACAGGGCGATTGT 60.126 61.111 0.00 0.00 34.83 2.71
783 797 0.741221 GACAGGGCGATTGTGAGGTC 60.741 60.000 0.00 0.00 0.00 3.85
787 801 2.670148 GGCGATTGTGAGGTCCCCT 61.670 63.158 0.00 0.00 36.03 4.79
843 858 4.715130 CACCGTCCCTCCCTCCCA 62.715 72.222 0.00 0.00 0.00 4.37
844 859 4.716977 ACCGTCCCTCCCTCCCAC 62.717 72.222 0.00 0.00 0.00 4.61
847 862 4.348495 GTCCCTCCCTCCCACCCA 62.348 72.222 0.00 0.00 0.00 4.51
912 927 1.153823 CCTCCACGTACAGCCTTCG 60.154 63.158 0.00 0.00 0.00 3.79
916 931 1.805945 CACGTACAGCCTTCGGAGC 60.806 63.158 0.00 0.00 0.00 4.70
1134 1149 1.741706 CTTGCAAAGCTGATGTCGGAT 59.258 47.619 0.00 0.00 36.98 4.18
1501 1585 1.078759 CCTTGACATGGACGACGAGC 61.079 60.000 0.00 0.00 0.00 5.03
1528 1612 2.473576 GGGAGAGAAGCCCCTAACTA 57.526 55.000 0.00 0.00 39.81 2.24
1730 1815 6.200878 ACAAATGATAATGGTAGGGGTAGG 57.799 41.667 0.00 0.00 0.00 3.18
1849 1934 2.143925 GAACTGGAGGAAGGACAAACG 58.856 52.381 0.00 0.00 0.00 3.60
2083 2170 2.256117 TATGACTCAGCCTCGATCGA 57.744 50.000 18.32 18.32 0.00 3.59
2126 2213 6.879922 TGAGGATAAGGAGATAGAAGGGAAT 58.120 40.000 0.00 0.00 0.00 3.01
2305 2486 0.608640 GAATGTGACGAGGTGGGAGT 59.391 55.000 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 8.797529 GCGCGCGCAACAATTAATGAAATTAA 62.798 38.462 46.11 0.00 45.55 1.40
43 44 4.028107 CGCGCGCAACAATTAATGAAATTA 60.028 37.500 32.61 0.00 37.87 1.40
44 45 3.241615 CGCGCGCAACAATTAATGAAATT 60.242 39.130 32.61 0.00 41.28 1.82
45 46 2.278615 CGCGCGCAACAATTAATGAAAT 59.721 40.909 32.61 0.00 0.00 2.17
46 47 1.646238 CGCGCGCAACAATTAATGAAA 59.354 42.857 32.61 0.00 0.00 2.69
47 48 1.254882 CGCGCGCAACAATTAATGAA 58.745 45.000 32.61 0.00 0.00 2.57
48 49 1.131037 GCGCGCGCAACAATTAATGA 61.131 50.000 46.11 0.00 41.49 2.57
49 50 1.266658 GCGCGCGCAACAATTAATG 59.733 52.632 46.11 11.55 41.49 1.90
50 51 3.674229 GCGCGCGCAACAATTAAT 58.326 50.000 46.11 0.00 41.49 1.40
61 62 2.794981 AACGAAACATTGCGCGCG 60.795 55.556 28.44 28.44 0.00 6.86
62 63 2.706123 CCAACGAAACATTGCGCGC 61.706 57.895 27.26 27.26 0.00 6.86
63 64 0.454285 ATCCAACGAAACATTGCGCG 60.454 50.000 0.00 0.00 0.00 6.86
64 65 1.696988 AATCCAACGAAACATTGCGC 58.303 45.000 0.00 0.00 0.00 6.09
65 66 4.707210 AAAAATCCAACGAAACATTGCG 57.293 36.364 0.00 0.00 0.00 4.85
66 67 6.517914 TGTAAAAATCCAACGAAACATTGC 57.482 33.333 0.00 0.00 0.00 3.56
167 168 3.316029 TGTGATGGCTTGTTTGTCTTCTG 59.684 43.478 0.00 0.00 0.00 3.02
272 286 8.190385 AGACGTGTCTATGGGCACCTATATTG 62.190 46.154 8.34 0.00 44.50 1.90
273 287 6.220213 AGACGTGTCTATGGGCACCTATATT 61.220 44.000 8.34 0.00 44.50 1.28
274 288 4.753217 AGACGTGTCTATGGGCACCTATAT 60.753 45.833 8.34 0.00 44.50 0.86
275 289 3.436035 AGACGTGTCTATGGGCACCTATA 60.436 47.826 8.34 0.00 44.50 1.31
276 290 2.690026 AGACGTGTCTATGGGCACCTAT 60.690 50.000 8.34 0.00 44.50 2.57
277 291 1.341679 AGACGTGTCTATGGGCACCTA 60.342 52.381 8.34 0.00 44.50 3.08
278 292 0.614979 AGACGTGTCTATGGGCACCT 60.615 55.000 8.34 0.00 44.50 4.00
279 293 0.179108 GAGACGTGTCTATGGGCACC 60.179 60.000 8.34 0.00 45.76 5.01
280 294 0.530744 TGAGACGTGTCTATGGGCAC 59.469 55.000 14.38 3.31 40.61 5.01
281 295 1.485124 ATGAGACGTGTCTATGGGCA 58.515 50.000 14.38 0.00 40.61 5.36
282 296 3.255888 TCATATGAGACGTGTCTATGGGC 59.744 47.826 21.03 0.00 40.61 5.36
283 297 4.278419 TGTCATATGAGACGTGTCTATGGG 59.722 45.833 21.03 8.19 40.61 4.00
284 298 5.215903 GTGTCATATGAGACGTGTCTATGG 58.784 45.833 16.35 9.22 40.61 2.74
294 308 5.459107 GTCCATTGTACGTGTCATATGAGAC 59.541 44.000 20.29 20.29 38.99 3.36
295 309 5.588240 GTCCATTGTACGTGTCATATGAGA 58.412 41.667 5.42 1.05 0.00 3.27
296 310 4.441087 CGTCCATTGTACGTGTCATATGAG 59.559 45.833 5.42 0.00 35.66 2.90
297 311 4.096682 TCGTCCATTGTACGTGTCATATGA 59.903 41.667 0.00 0.00 41.08 2.15
298 312 4.356289 TCGTCCATTGTACGTGTCATATG 58.644 43.478 0.00 0.00 41.08 1.78
299 313 4.642445 TCGTCCATTGTACGTGTCATAT 57.358 40.909 0.00 0.00 41.08 1.78
300 314 4.356289 CATCGTCCATTGTACGTGTCATA 58.644 43.478 0.00 0.00 41.08 2.15
301 315 3.186909 CATCGTCCATTGTACGTGTCAT 58.813 45.455 0.00 0.00 41.08 3.06
302 316 2.601804 CATCGTCCATTGTACGTGTCA 58.398 47.619 0.00 0.00 41.08 3.58
303 317 1.323534 GCATCGTCCATTGTACGTGTC 59.676 52.381 0.00 0.00 41.08 3.67
304 318 1.337354 TGCATCGTCCATTGTACGTGT 60.337 47.619 0.00 0.00 41.08 4.49
305 319 1.355005 TGCATCGTCCATTGTACGTG 58.645 50.000 0.00 1.79 41.08 4.49
306 320 2.087501 TTGCATCGTCCATTGTACGT 57.912 45.000 1.62 0.00 41.08 3.57
307 321 3.463533 TTTTGCATCGTCCATTGTACG 57.536 42.857 0.00 0.00 41.64 3.67
308 322 5.041951 TCTTTTTGCATCGTCCATTGTAC 57.958 39.130 0.00 0.00 0.00 2.90
309 323 5.697473 TTCTTTTTGCATCGTCCATTGTA 57.303 34.783 0.00 0.00 0.00 2.41
310 324 4.582701 TTCTTTTTGCATCGTCCATTGT 57.417 36.364 0.00 0.00 0.00 2.71
311 325 5.463061 AGTTTTCTTTTTGCATCGTCCATTG 59.537 36.000 0.00 0.00 0.00 2.82
312 326 5.600696 AGTTTTCTTTTTGCATCGTCCATT 58.399 33.333 0.00 0.00 0.00 3.16
313 327 5.200368 AGTTTTCTTTTTGCATCGTCCAT 57.800 34.783 0.00 0.00 0.00 3.41
314 328 4.647424 AGTTTTCTTTTTGCATCGTCCA 57.353 36.364 0.00 0.00 0.00 4.02
315 329 5.040635 TGAAGTTTTCTTTTTGCATCGTCC 58.959 37.500 0.00 0.00 40.61 4.79
316 330 6.397894 CGATGAAGTTTTCTTTTTGCATCGTC 60.398 38.462 0.02 0.00 45.31 4.20
317 331 5.399301 CGATGAAGTTTTCTTTTTGCATCGT 59.601 36.000 0.02 0.00 45.31 3.73
318 332 5.825484 CGATGAAGTTTTCTTTTTGCATCG 58.175 37.500 0.00 0.00 45.22 3.84
319 333 6.991485 TCGATGAAGTTTTCTTTTTGCATC 57.009 33.333 0.00 0.00 40.61 3.91
320 334 6.756074 TGTTCGATGAAGTTTTCTTTTTGCAT 59.244 30.769 0.00 0.00 40.61 3.96
321 335 6.034470 GTGTTCGATGAAGTTTTCTTTTTGCA 59.966 34.615 0.00 0.00 40.61 4.08
322 336 6.402816 GTGTTCGATGAAGTTTTCTTTTTGC 58.597 36.000 0.00 0.00 40.61 3.68
323 337 6.019881 GGGTGTTCGATGAAGTTTTCTTTTTG 60.020 38.462 0.00 0.00 40.61 2.44
324 338 6.040247 GGGTGTTCGATGAAGTTTTCTTTTT 58.960 36.000 0.00 0.00 40.61 1.94
325 339 5.126384 TGGGTGTTCGATGAAGTTTTCTTTT 59.874 36.000 0.00 0.00 40.61 2.27
326 340 4.642885 TGGGTGTTCGATGAAGTTTTCTTT 59.357 37.500 0.00 0.00 40.61 2.52
327 341 4.204012 TGGGTGTTCGATGAAGTTTTCTT 58.796 39.130 0.00 0.00 43.55 2.52
328 342 3.815809 TGGGTGTTCGATGAAGTTTTCT 58.184 40.909 0.00 0.00 0.00 2.52
329 343 4.766404 ATGGGTGTTCGATGAAGTTTTC 57.234 40.909 0.00 0.00 0.00 2.29
330 344 4.700213 CCTATGGGTGTTCGATGAAGTTTT 59.300 41.667 0.00 0.00 0.00 2.43
331 345 4.019681 TCCTATGGGTGTTCGATGAAGTTT 60.020 41.667 0.00 0.00 0.00 2.66
332 346 3.517901 TCCTATGGGTGTTCGATGAAGTT 59.482 43.478 0.00 0.00 0.00 2.66
333 347 3.104512 TCCTATGGGTGTTCGATGAAGT 58.895 45.455 0.00 0.00 0.00 3.01
334 348 3.458189 GTCCTATGGGTGTTCGATGAAG 58.542 50.000 0.00 0.00 0.00 3.02
335 349 2.159156 CGTCCTATGGGTGTTCGATGAA 60.159 50.000 0.00 0.00 0.00 2.57
336 350 1.407618 CGTCCTATGGGTGTTCGATGA 59.592 52.381 0.00 0.00 0.00 2.92
337 351 1.407618 TCGTCCTATGGGTGTTCGATG 59.592 52.381 0.00 0.00 0.00 3.84
338 352 1.771565 TCGTCCTATGGGTGTTCGAT 58.228 50.000 0.00 0.00 0.00 3.59
339 353 1.679680 GATCGTCCTATGGGTGTTCGA 59.320 52.381 0.00 2.83 0.00 3.71
340 354 1.269621 GGATCGTCCTATGGGTGTTCG 60.270 57.143 0.00 0.00 32.53 3.95
341 355 1.760613 TGGATCGTCCTATGGGTGTTC 59.239 52.381 0.00 0.00 37.46 3.18
342 356 1.874129 TGGATCGTCCTATGGGTGTT 58.126 50.000 0.00 0.00 37.46 3.32
343 357 1.485066 GTTGGATCGTCCTATGGGTGT 59.515 52.381 0.00 0.00 37.46 4.16
344 358 1.484653 TGTTGGATCGTCCTATGGGTG 59.515 52.381 0.00 0.00 37.46 4.61
345 359 1.485066 GTGTTGGATCGTCCTATGGGT 59.515 52.381 0.00 0.00 37.46 4.51
346 360 1.538204 CGTGTTGGATCGTCCTATGGG 60.538 57.143 5.77 0.00 37.46 4.00
347 361 1.136305 ACGTGTTGGATCGTCCTATGG 59.864 52.381 0.00 0.00 37.46 2.74
348 362 2.460918 GACGTGTTGGATCGTCCTATG 58.539 52.381 0.00 1.90 46.83 2.23
349 363 2.865343 GACGTGTTGGATCGTCCTAT 57.135 50.000 0.00 0.00 46.83 2.57
354 368 0.895530 ATGAGGACGTGTTGGATCGT 59.104 50.000 0.00 0.00 43.00 3.73
355 369 1.280982 CATGAGGACGTGTTGGATCG 58.719 55.000 0.00 0.00 0.00 3.69
356 370 2.093973 AGACATGAGGACGTGTTGGATC 60.094 50.000 0.00 0.00 44.92 3.36
357 371 1.902508 AGACATGAGGACGTGTTGGAT 59.097 47.619 0.00 0.00 44.92 3.41
358 372 1.338107 AGACATGAGGACGTGTTGGA 58.662 50.000 0.00 0.00 44.92 3.53
359 373 1.800586 CAAGACATGAGGACGTGTTGG 59.199 52.381 0.00 0.00 44.92 3.77
360 374 1.195448 GCAAGACATGAGGACGTGTTG 59.805 52.381 0.00 0.00 44.92 3.33
361 375 1.202639 TGCAAGACATGAGGACGTGTT 60.203 47.619 0.00 0.00 44.92 3.32
363 377 1.662629 GATGCAAGACATGAGGACGTG 59.337 52.381 0.00 0.00 39.84 4.49
364 378 1.406069 GGATGCAAGACATGAGGACGT 60.406 52.381 0.00 0.00 39.84 4.34
365 379 1.293924 GGATGCAAGACATGAGGACG 58.706 55.000 0.00 0.00 39.84 4.79
366 380 2.408271 TGGATGCAAGACATGAGGAC 57.592 50.000 0.00 0.00 39.84 3.85
367 381 3.657398 AATGGATGCAAGACATGAGGA 57.343 42.857 0.00 0.00 39.84 3.71
368 382 4.711399 TCTAATGGATGCAAGACATGAGG 58.289 43.478 0.00 3.08 39.84 3.86
369 383 5.277876 GCTTCTAATGGATGCAAGACATGAG 60.278 44.000 0.00 0.00 42.46 2.90
370 384 4.577693 GCTTCTAATGGATGCAAGACATGA 59.422 41.667 0.00 0.00 42.46 3.07
371 385 4.856664 GCTTCTAATGGATGCAAGACATG 58.143 43.478 0.00 0.00 42.46 3.21
378 392 4.340097 CATCCTTTGCTTCTAATGGATGCA 59.660 41.667 15.79 3.18 46.39 3.96
379 393 4.868067 CATCCTTTGCTTCTAATGGATGC 58.132 43.478 15.79 0.00 46.39 3.91
381 395 9.021807 CATATTCATCCTTTGCTTCTAATGGAT 57.978 33.333 0.00 0.00 42.22 3.41
382 396 8.000709 ACATATTCATCCTTTGCTTCTAATGGA 58.999 33.333 0.00 0.00 38.00 3.41
383 397 8.174733 ACATATTCATCCTTTGCTTCTAATGG 57.825 34.615 0.00 0.00 0.00 3.16
384 398 8.295288 GGACATATTCATCCTTTGCTTCTAATG 58.705 37.037 0.00 0.00 31.75 1.90
385 399 7.449704 GGGACATATTCATCCTTTGCTTCTAAT 59.550 37.037 0.00 0.00 35.15 1.73
386 400 6.772716 GGGACATATTCATCCTTTGCTTCTAA 59.227 38.462 0.00 0.00 35.15 2.10
387 401 6.101734 AGGGACATATTCATCCTTTGCTTCTA 59.898 38.462 0.00 0.00 35.15 2.10
388 402 5.103771 AGGGACATATTCATCCTTTGCTTCT 60.104 40.000 0.00 0.00 35.15 2.85
389 403 5.136105 AGGGACATATTCATCCTTTGCTTC 58.864 41.667 0.00 0.00 35.15 3.86
390 404 5.134725 AGGGACATATTCATCCTTTGCTT 57.865 39.130 0.00 0.00 35.15 3.91
391 405 4.803329 AGGGACATATTCATCCTTTGCT 57.197 40.909 0.00 0.00 35.15 3.91
392 406 8.814038 ATTATAGGGACATATTCATCCTTTGC 57.186 34.615 0.00 0.00 35.15 3.68
420 434 9.179909 TGTTGGACCGTGTATGATTTATTATTT 57.820 29.630 0.00 0.00 0.00 1.40
421 435 8.740123 TGTTGGACCGTGTATGATTTATTATT 57.260 30.769 0.00 0.00 0.00 1.40
422 436 8.783093 CATGTTGGACCGTGTATGATTTATTAT 58.217 33.333 0.00 0.00 0.00 1.28
423 437 7.771361 ACATGTTGGACCGTGTATGATTTATTA 59.229 33.333 0.00 0.00 32.90 0.98
424 438 6.601613 ACATGTTGGACCGTGTATGATTTATT 59.398 34.615 0.00 0.00 32.90 1.40
425 439 6.119536 ACATGTTGGACCGTGTATGATTTAT 58.880 36.000 0.00 0.00 32.90 1.40
426 440 5.492895 ACATGTTGGACCGTGTATGATTTA 58.507 37.500 0.00 0.00 32.90 1.40
427 441 4.331968 ACATGTTGGACCGTGTATGATTT 58.668 39.130 0.00 0.00 32.90 2.17
428 442 3.938963 GACATGTTGGACCGTGTATGATT 59.061 43.478 0.00 0.00 34.78 2.57
429 443 3.531538 GACATGTTGGACCGTGTATGAT 58.468 45.455 0.00 0.00 34.78 2.45
430 444 2.672760 CGACATGTTGGACCGTGTATGA 60.673 50.000 5.04 0.00 34.78 2.15
431 445 1.658596 CGACATGTTGGACCGTGTATG 59.341 52.381 5.04 0.00 34.78 2.39
432 446 1.546923 TCGACATGTTGGACCGTGTAT 59.453 47.619 13.27 0.00 34.78 2.29
433 447 0.960286 TCGACATGTTGGACCGTGTA 59.040 50.000 13.27 0.00 34.78 2.90
434 448 0.105224 TTCGACATGTTGGACCGTGT 59.895 50.000 13.27 0.00 37.28 4.49
435 449 0.790207 CTTCGACATGTTGGACCGTG 59.210 55.000 13.27 0.36 0.00 4.94
436 450 0.391597 ACTTCGACATGTTGGACCGT 59.608 50.000 13.27 0.00 0.00 4.83
437 451 0.790207 CACTTCGACATGTTGGACCG 59.210 55.000 13.27 5.41 0.00 4.79
438 452 1.878953 ACACTTCGACATGTTGGACC 58.121 50.000 13.27 0.00 0.00 4.46
439 453 3.521524 GAACACTTCGACATGTTGGAC 57.478 47.619 16.17 1.50 39.13 4.02
451 465 2.225727 GGGTTTCCATGTCGAACACTTC 59.774 50.000 0.00 0.00 0.00 3.01
452 466 2.227194 GGGTTTCCATGTCGAACACTT 58.773 47.619 0.00 0.00 0.00 3.16
453 467 1.142060 TGGGTTTCCATGTCGAACACT 59.858 47.619 0.00 0.00 38.32 3.55
454 468 1.600023 TGGGTTTCCATGTCGAACAC 58.400 50.000 0.00 0.00 38.32 3.32
455 469 2.350057 TTGGGTTTCCATGTCGAACA 57.650 45.000 0.00 0.00 43.63 3.18
456 470 2.882137 TCTTTGGGTTTCCATGTCGAAC 59.118 45.455 0.00 0.00 43.63 3.95
457 471 3.146066 CTCTTTGGGTTTCCATGTCGAA 58.854 45.455 0.00 0.00 43.63 3.71
458 472 2.370519 TCTCTTTGGGTTTCCATGTCGA 59.629 45.455 0.00 0.00 43.63 4.20
459 473 2.484264 GTCTCTTTGGGTTTCCATGTCG 59.516 50.000 0.00 0.00 43.63 4.35
460 474 3.486383 TGTCTCTTTGGGTTTCCATGTC 58.514 45.455 0.00 0.00 43.63 3.06
461 475 3.593442 TGTCTCTTTGGGTTTCCATGT 57.407 42.857 0.00 0.00 43.63 3.21
462 476 4.584325 TCTTTGTCTCTTTGGGTTTCCATG 59.416 41.667 0.00 0.00 43.63 3.66
463 477 4.803452 TCTTTGTCTCTTTGGGTTTCCAT 58.197 39.130 0.00 0.00 43.63 3.41
464 478 4.243793 TCTTTGTCTCTTTGGGTTTCCA 57.756 40.909 0.00 0.00 42.25 3.53
465 479 5.069119 ACATTCTTTGTCTCTTTGGGTTTCC 59.931 40.000 0.00 0.00 30.89 3.13
466 480 6.149129 ACATTCTTTGTCTCTTTGGGTTTC 57.851 37.500 0.00 0.00 30.89 2.78
487 501 1.447663 CGGCCATCATGTCGTGACA 60.448 57.895 2.24 4.99 46.44 3.58
488 502 0.739462 TTCGGCCATCATGTCGTGAC 60.739 55.000 2.24 0.00 40.28 3.67
489 503 0.739462 GTTCGGCCATCATGTCGTGA 60.739 55.000 2.24 0.00 42.06 4.35
490 504 1.018752 TGTTCGGCCATCATGTCGTG 61.019 55.000 2.24 0.00 0.00 4.35
491 505 0.321210 TTGTTCGGCCATCATGTCGT 60.321 50.000 2.24 0.00 0.00 4.34
492 506 0.801872 TTTGTTCGGCCATCATGTCG 59.198 50.000 2.24 0.00 0.00 4.35
493 507 2.986479 GTTTTTGTTCGGCCATCATGTC 59.014 45.455 2.24 0.00 0.00 3.06
494 508 2.363680 TGTTTTTGTTCGGCCATCATGT 59.636 40.909 2.24 0.00 0.00 3.21
495 509 2.988493 CTGTTTTTGTTCGGCCATCATG 59.012 45.455 2.24 0.00 0.00 3.07
496 510 2.890311 TCTGTTTTTGTTCGGCCATCAT 59.110 40.909 2.24 0.00 0.00 2.45
497 511 2.034053 GTCTGTTTTTGTTCGGCCATCA 59.966 45.455 2.24 0.00 0.00 3.07
498 512 2.034053 TGTCTGTTTTTGTTCGGCCATC 59.966 45.455 2.24 0.00 0.00 3.51
499 513 2.028130 TGTCTGTTTTTGTTCGGCCAT 58.972 42.857 2.24 0.00 0.00 4.40
500 514 1.464734 TGTCTGTTTTTGTTCGGCCA 58.535 45.000 2.24 0.00 0.00 5.36
501 515 2.459934 CTTGTCTGTTTTTGTTCGGCC 58.540 47.619 0.00 0.00 0.00 6.13
502 516 2.098443 TCCTTGTCTGTTTTTGTTCGGC 59.902 45.455 0.00 0.00 0.00 5.54
503 517 3.127895 TGTCCTTGTCTGTTTTTGTTCGG 59.872 43.478 0.00 0.00 0.00 4.30
504 518 4.095610 GTGTCCTTGTCTGTTTTTGTTCG 58.904 43.478 0.00 0.00 0.00 3.95
505 519 5.054390 TGTGTCCTTGTCTGTTTTTGTTC 57.946 39.130 0.00 0.00 0.00 3.18
506 520 5.659440 ATGTGTCCTTGTCTGTTTTTGTT 57.341 34.783 0.00 0.00 0.00 2.83
507 521 6.959639 ATATGTGTCCTTGTCTGTTTTTGT 57.040 33.333 0.00 0.00 0.00 2.83
508 522 8.322906 TCTATATGTGTCCTTGTCTGTTTTTG 57.677 34.615 0.00 0.00 0.00 2.44
510 524 9.601217 GTATCTATATGTGTCCTTGTCTGTTTT 57.399 33.333 0.00 0.00 0.00 2.43
511 525 8.758829 TGTATCTATATGTGTCCTTGTCTGTTT 58.241 33.333 0.00 0.00 0.00 2.83
512 526 8.306313 TGTATCTATATGTGTCCTTGTCTGTT 57.694 34.615 0.00 0.00 0.00 3.16
513 527 7.898014 TGTATCTATATGTGTCCTTGTCTGT 57.102 36.000 0.00 0.00 0.00 3.41
514 528 7.330454 GCATGTATCTATATGTGTCCTTGTCTG 59.670 40.741 0.00 0.00 0.00 3.51
515 529 7.015584 TGCATGTATCTATATGTGTCCTTGTCT 59.984 37.037 0.00 0.00 0.00 3.41
516 530 7.154656 TGCATGTATCTATATGTGTCCTTGTC 58.845 38.462 0.00 0.00 0.00 3.18
517 531 7.066307 TGCATGTATCTATATGTGTCCTTGT 57.934 36.000 0.00 0.00 0.00 3.16
518 532 7.967890 TTGCATGTATCTATATGTGTCCTTG 57.032 36.000 0.00 0.00 0.00 3.61
520 534 9.881649 CTATTTGCATGTATCTATATGTGTCCT 57.118 33.333 0.00 0.00 0.00 3.85
521 535 9.102757 CCTATTTGCATGTATCTATATGTGTCC 57.897 37.037 0.00 0.00 0.00 4.02
522 536 9.875691 TCCTATTTGCATGTATCTATATGTGTC 57.124 33.333 0.00 0.00 0.00 3.67
523 537 9.658799 GTCCTATTTGCATGTATCTATATGTGT 57.341 33.333 0.00 0.00 0.00 3.72
524 538 8.811378 CGTCCTATTTGCATGTATCTATATGTG 58.189 37.037 0.00 0.00 0.00 3.21
525 539 8.749354 TCGTCCTATTTGCATGTATCTATATGT 58.251 33.333 0.00 0.00 0.00 2.29
526 540 9.242477 CTCGTCCTATTTGCATGTATCTATATG 57.758 37.037 0.00 0.00 0.00 1.78
527 541 8.417106 CCTCGTCCTATTTGCATGTATCTATAT 58.583 37.037 0.00 0.00 0.00 0.86
528 542 7.614192 TCCTCGTCCTATTTGCATGTATCTATA 59.386 37.037 0.00 0.00 0.00 1.31
529 543 6.437477 TCCTCGTCCTATTTGCATGTATCTAT 59.563 38.462 0.00 0.00 0.00 1.98
530 544 5.773176 TCCTCGTCCTATTTGCATGTATCTA 59.227 40.000 0.00 0.00 0.00 1.98
531 545 4.588951 TCCTCGTCCTATTTGCATGTATCT 59.411 41.667 0.00 0.00 0.00 1.98
532 546 4.883083 TCCTCGTCCTATTTGCATGTATC 58.117 43.478 0.00 0.00 0.00 2.24
533 547 4.955811 TCCTCGTCCTATTTGCATGTAT 57.044 40.909 0.00 0.00 0.00 2.29
534 548 4.746535 TTCCTCGTCCTATTTGCATGTA 57.253 40.909 0.00 0.00 0.00 2.29
535 549 3.627395 TTCCTCGTCCTATTTGCATGT 57.373 42.857 0.00 0.00 0.00 3.21
536 550 3.941483 AGTTTCCTCGTCCTATTTGCATG 59.059 43.478 0.00 0.00 0.00 4.06
537 551 4.192317 GAGTTTCCTCGTCCTATTTGCAT 58.808 43.478 0.00 0.00 0.00 3.96
538 552 3.007506 TGAGTTTCCTCGTCCTATTTGCA 59.992 43.478 0.00 0.00 40.85 4.08
539 553 3.596214 TGAGTTTCCTCGTCCTATTTGC 58.404 45.455 0.00 0.00 40.85 3.68
540 554 4.994852 TGTTGAGTTTCCTCGTCCTATTTG 59.005 41.667 0.00 0.00 40.85 2.32
541 555 4.995487 GTGTTGAGTTTCCTCGTCCTATTT 59.005 41.667 0.00 0.00 40.85 1.40
542 556 4.283722 AGTGTTGAGTTTCCTCGTCCTATT 59.716 41.667 0.00 0.00 40.85 1.73
543 557 3.833070 AGTGTTGAGTTTCCTCGTCCTAT 59.167 43.478 0.00 0.00 40.85 2.57
544 558 3.005472 CAGTGTTGAGTTTCCTCGTCCTA 59.995 47.826 0.00 0.00 40.85 2.94
545 559 2.040178 AGTGTTGAGTTTCCTCGTCCT 58.960 47.619 0.00 0.00 40.85 3.85
546 560 2.135933 CAGTGTTGAGTTTCCTCGTCC 58.864 52.381 0.00 0.00 40.85 4.79
547 561 2.540101 CACAGTGTTGAGTTTCCTCGTC 59.460 50.000 0.00 0.00 40.85 4.20
548 562 2.550978 CACAGTGTTGAGTTTCCTCGT 58.449 47.619 0.00 0.00 40.85 4.18
549 563 1.261619 GCACAGTGTTGAGTTTCCTCG 59.738 52.381 1.61 0.00 40.85 4.63
550 564 1.604278 GGCACAGTGTTGAGTTTCCTC 59.396 52.381 1.61 0.00 38.27 3.71
551 565 1.680338 GGCACAGTGTTGAGTTTCCT 58.320 50.000 1.61 0.00 0.00 3.36
552 566 0.307760 CGGCACAGTGTTGAGTTTCC 59.692 55.000 1.61 0.00 0.00 3.13
553 567 0.307760 CCGGCACAGTGTTGAGTTTC 59.692 55.000 1.61 0.00 0.00 2.78
554 568 1.724582 GCCGGCACAGTGTTGAGTTT 61.725 55.000 24.80 0.00 0.00 2.66
555 569 2.186826 GCCGGCACAGTGTTGAGTT 61.187 57.895 24.80 0.00 0.00 3.01
556 570 1.754380 TAGCCGGCACAGTGTTGAGT 61.754 55.000 31.54 5.27 0.00 3.41
557 571 1.005037 TAGCCGGCACAGTGTTGAG 60.005 57.895 31.54 0.00 0.00 3.02
558 572 1.301401 GTAGCCGGCACAGTGTTGA 60.301 57.895 31.54 0.00 0.00 3.18
559 573 1.163420 TTGTAGCCGGCACAGTGTTG 61.163 55.000 31.54 0.00 0.00 3.33
560 574 1.147376 TTGTAGCCGGCACAGTGTT 59.853 52.632 31.54 8.51 0.00 3.32
561 575 1.597027 GTTGTAGCCGGCACAGTGT 60.597 57.895 31.54 9.39 0.00 3.55
562 576 1.568612 CTGTTGTAGCCGGCACAGTG 61.569 60.000 31.54 17.86 0.00 3.66
563 577 1.301716 CTGTTGTAGCCGGCACAGT 60.302 57.895 31.54 10.73 0.00 3.55
564 578 3.566261 CTGTTGTAGCCGGCACAG 58.434 61.111 31.54 27.62 0.00 3.66
573 587 5.109903 GTGTTGAGGTATAGGCTGTTGTAG 58.890 45.833 0.00 0.00 0.00 2.74
574 588 4.381185 CGTGTTGAGGTATAGGCTGTTGTA 60.381 45.833 0.00 0.00 0.00 2.41
575 589 3.616560 CGTGTTGAGGTATAGGCTGTTGT 60.617 47.826 0.00 0.00 0.00 3.32
576 590 2.930040 CGTGTTGAGGTATAGGCTGTTG 59.070 50.000 0.00 0.00 0.00 3.33
577 591 2.829720 TCGTGTTGAGGTATAGGCTGTT 59.170 45.455 0.00 0.00 0.00 3.16
578 592 2.453521 TCGTGTTGAGGTATAGGCTGT 58.546 47.619 0.00 0.00 0.00 4.40
579 593 3.181475 ACATCGTGTTGAGGTATAGGCTG 60.181 47.826 0.00 0.00 40.43 4.85
580 594 3.031736 ACATCGTGTTGAGGTATAGGCT 58.968 45.455 0.00 0.00 40.43 4.58
581 595 3.068307 AGACATCGTGTTGAGGTATAGGC 59.932 47.826 0.00 0.00 42.70 3.93
582 596 4.611943 CAGACATCGTGTTGAGGTATAGG 58.388 47.826 0.00 0.00 42.70 2.57
583 597 4.045104 GCAGACATCGTGTTGAGGTATAG 58.955 47.826 0.00 0.00 42.70 1.31
584 598 3.699538 AGCAGACATCGTGTTGAGGTATA 59.300 43.478 0.00 0.00 42.70 1.47
585 599 2.497675 AGCAGACATCGTGTTGAGGTAT 59.502 45.455 0.00 0.00 42.70 2.73
586 600 1.893137 AGCAGACATCGTGTTGAGGTA 59.107 47.619 0.00 0.00 42.70 3.08
587 601 0.681733 AGCAGACATCGTGTTGAGGT 59.318 50.000 0.00 0.00 45.94 3.85
588 602 2.094494 AGTAGCAGACATCGTGTTGAGG 60.094 50.000 0.00 0.00 0.00 3.86
589 603 3.175152 GAGTAGCAGACATCGTGTTGAG 58.825 50.000 0.00 0.00 0.00 3.02
590 604 2.094700 GGAGTAGCAGACATCGTGTTGA 60.095 50.000 0.00 0.00 0.00 3.18
591 605 2.263077 GGAGTAGCAGACATCGTGTTG 58.737 52.381 0.00 0.00 0.00 3.33
592 606 1.204941 GGGAGTAGCAGACATCGTGTT 59.795 52.381 0.00 0.00 0.00 3.32
593 607 0.818296 GGGAGTAGCAGACATCGTGT 59.182 55.000 0.00 0.00 0.00 4.49
594 608 0.103208 GGGGAGTAGCAGACATCGTG 59.897 60.000 0.00 0.00 0.00 4.35
595 609 1.384989 CGGGGAGTAGCAGACATCGT 61.385 60.000 0.00 0.00 0.00 3.73
596 610 1.360551 CGGGGAGTAGCAGACATCG 59.639 63.158 0.00 0.00 0.00 3.84
597 611 1.068250 GCGGGGAGTAGCAGACATC 59.932 63.158 0.00 0.00 0.00 3.06
598 612 1.264749 TTGCGGGGAGTAGCAGACAT 61.265 55.000 0.00 0.00 44.72 3.06
599 613 1.476845 TTTGCGGGGAGTAGCAGACA 61.477 55.000 0.00 0.00 44.72 3.41
600 614 0.321298 TTTTGCGGGGAGTAGCAGAC 60.321 55.000 0.00 0.00 44.72 3.51
601 615 0.398696 TTTTTGCGGGGAGTAGCAGA 59.601 50.000 0.00 0.00 44.72 4.26
602 616 2.941210 TTTTTGCGGGGAGTAGCAG 58.059 52.632 0.00 0.00 44.72 4.24
621 635 3.874543 TGTAGCAGACATCGTGTGTTTTT 59.125 39.130 0.00 0.00 42.36 1.94
622 636 3.462982 TGTAGCAGACATCGTGTGTTTT 58.537 40.909 0.00 0.00 42.36 2.43
623 637 3.106242 TGTAGCAGACATCGTGTGTTT 57.894 42.857 0.00 0.00 42.36 2.83
624 638 2.812358 TGTAGCAGACATCGTGTGTT 57.188 45.000 0.00 0.00 42.36 3.32
625 639 2.812358 TTGTAGCAGACATCGTGTGT 57.188 45.000 0.00 0.00 45.83 3.72
626 640 3.798878 CCTATTGTAGCAGACATCGTGTG 59.201 47.826 0.00 0.00 38.07 3.82
627 641 3.738281 GCCTATTGTAGCAGACATCGTGT 60.738 47.826 0.00 0.00 38.07 4.49
628 642 2.797156 GCCTATTGTAGCAGACATCGTG 59.203 50.000 0.00 0.00 38.07 4.35
629 643 2.695666 AGCCTATTGTAGCAGACATCGT 59.304 45.455 0.00 0.00 38.07 3.73
630 644 3.377346 AGCCTATTGTAGCAGACATCG 57.623 47.619 0.00 0.00 38.07 3.84
631 645 4.241681 GCTAGCCTATTGTAGCAGACATC 58.758 47.826 2.29 0.00 41.21 3.06
632 646 3.007398 GGCTAGCCTATTGTAGCAGACAT 59.993 47.826 27.17 0.00 43.01 3.06
633 647 2.365617 GGCTAGCCTATTGTAGCAGACA 59.634 50.000 27.17 0.00 43.01 3.41
634 648 2.365617 TGGCTAGCCTATTGTAGCAGAC 59.634 50.000 33.07 3.11 43.01 3.51
635 649 2.677914 TGGCTAGCCTATTGTAGCAGA 58.322 47.619 33.07 6.61 43.01 4.26
636 650 3.475566 TTGGCTAGCCTATTGTAGCAG 57.524 47.619 33.07 0.00 43.01 4.24
637 651 3.541632 GTTTGGCTAGCCTATTGTAGCA 58.458 45.455 33.07 7.98 43.01 3.49
638 652 2.879026 GGTTTGGCTAGCCTATTGTAGC 59.121 50.000 33.07 16.79 40.89 3.58
639 653 4.150897 TGGTTTGGCTAGCCTATTGTAG 57.849 45.455 33.07 0.00 36.94 2.74
640 654 4.266714 GTTGGTTTGGCTAGCCTATTGTA 58.733 43.478 33.07 10.39 36.94 2.41
641 655 3.089284 GTTGGTTTGGCTAGCCTATTGT 58.911 45.455 33.07 0.00 36.94 2.71
642 656 2.427095 GGTTGGTTTGGCTAGCCTATTG 59.573 50.000 33.07 0.00 36.94 1.90
643 657 2.042433 TGGTTGGTTTGGCTAGCCTATT 59.958 45.455 33.07 0.00 36.94 1.73
644 658 1.638589 TGGTTGGTTTGGCTAGCCTAT 59.361 47.619 33.07 0.00 36.94 2.57
645 659 1.068948 TGGTTGGTTTGGCTAGCCTA 58.931 50.000 33.07 24.39 36.94 3.93
646 660 0.187361 TTGGTTGGTTTGGCTAGCCT 59.813 50.000 33.07 0.00 36.94 4.58
647 661 1.266178 ATTGGTTGGTTTGGCTAGCC 58.734 50.000 27.71 27.71 0.00 3.93
648 662 6.488683 TGTATATATTGGTTGGTTTGGCTAGC 59.511 38.462 6.04 6.04 0.00 3.42
649 663 8.458573 TTGTATATATTGGTTGGTTTGGCTAG 57.541 34.615 0.00 0.00 0.00 3.42
650 664 7.013846 GCTTGTATATATTGGTTGGTTTGGCTA 59.986 37.037 0.00 0.00 0.00 3.93
651 665 6.183360 GCTTGTATATATTGGTTGGTTTGGCT 60.183 38.462 0.00 0.00 0.00 4.75
652 666 5.983118 GCTTGTATATATTGGTTGGTTTGGC 59.017 40.000 0.00 0.00 0.00 4.52
653 667 6.462347 GGGCTTGTATATATTGGTTGGTTTGG 60.462 42.308 0.00 0.00 0.00 3.28
654 668 6.323739 AGGGCTTGTATATATTGGTTGGTTTG 59.676 38.462 0.00 0.00 0.00 2.93
655 669 6.323739 CAGGGCTTGTATATATTGGTTGGTTT 59.676 38.462 0.00 0.00 0.00 3.27
656 670 5.833131 CAGGGCTTGTATATATTGGTTGGTT 59.167 40.000 0.00 0.00 0.00 3.67
657 671 5.133660 TCAGGGCTTGTATATATTGGTTGGT 59.866 40.000 0.00 0.00 0.00 3.67
658 672 5.630121 TCAGGGCTTGTATATATTGGTTGG 58.370 41.667 0.00 0.00 0.00 3.77
659 673 6.545666 TGTTCAGGGCTTGTATATATTGGTTG 59.454 38.462 0.00 0.00 0.00 3.77
660 674 6.546034 GTGTTCAGGGCTTGTATATATTGGTT 59.454 38.462 0.00 0.00 0.00 3.67
661 675 6.062095 GTGTTCAGGGCTTGTATATATTGGT 58.938 40.000 0.00 0.00 0.00 3.67
662 676 5.473504 GGTGTTCAGGGCTTGTATATATTGG 59.526 44.000 0.00 0.00 0.00 3.16
663 677 5.179368 CGGTGTTCAGGGCTTGTATATATTG 59.821 44.000 0.00 0.00 0.00 1.90
664 678 5.071250 TCGGTGTTCAGGGCTTGTATATATT 59.929 40.000 0.00 0.00 0.00 1.28
665 679 4.591498 TCGGTGTTCAGGGCTTGTATATAT 59.409 41.667 0.00 0.00 0.00 0.86
666 680 3.962063 TCGGTGTTCAGGGCTTGTATATA 59.038 43.478 0.00 0.00 0.00 0.86
667 681 2.769663 TCGGTGTTCAGGGCTTGTATAT 59.230 45.455 0.00 0.00 0.00 0.86
668 682 2.093869 GTCGGTGTTCAGGGCTTGTATA 60.094 50.000 0.00 0.00 0.00 1.47
669 683 0.981183 TCGGTGTTCAGGGCTTGTAT 59.019 50.000 0.00 0.00 0.00 2.29
670 684 0.034337 GTCGGTGTTCAGGGCTTGTA 59.966 55.000 0.00 0.00 0.00 2.41
671 685 1.227853 GTCGGTGTTCAGGGCTTGT 60.228 57.895 0.00 0.00 0.00 3.16
672 686 2.317609 CGTCGGTGTTCAGGGCTTG 61.318 63.158 0.00 0.00 0.00 4.01
673 687 2.030562 CGTCGGTGTTCAGGGCTT 59.969 61.111 0.00 0.00 0.00 4.35
674 688 4.681978 GCGTCGGTGTTCAGGGCT 62.682 66.667 0.00 0.00 0.00 5.19
675 689 2.845752 TATGCGTCGGTGTTCAGGGC 62.846 60.000 0.00 0.00 0.00 5.19
676 690 0.179084 ATATGCGTCGGTGTTCAGGG 60.179 55.000 0.00 0.00 0.00 4.45
677 691 1.209128 GATATGCGTCGGTGTTCAGG 58.791 55.000 0.00 0.00 0.00 3.86
678 692 1.209128 GGATATGCGTCGGTGTTCAG 58.791 55.000 0.00 0.00 0.00 3.02
679 693 0.533032 TGGATATGCGTCGGTGTTCA 59.467 50.000 0.00 0.00 0.00 3.18
680 694 1.326548 GTTGGATATGCGTCGGTGTTC 59.673 52.381 0.00 0.00 0.00 3.18
681 695 1.066430 AGTTGGATATGCGTCGGTGTT 60.066 47.619 0.00 0.00 0.00 3.32
682 696 0.535335 AGTTGGATATGCGTCGGTGT 59.465 50.000 0.00 0.00 0.00 4.16
683 697 0.930310 CAGTTGGATATGCGTCGGTG 59.070 55.000 0.00 0.00 0.00 4.94
684 698 0.535335 ACAGTTGGATATGCGTCGGT 59.465 50.000 0.00 0.00 0.00 4.69
685 699 2.124903 GTACAGTTGGATATGCGTCGG 58.875 52.381 0.00 0.00 0.00 4.79
686 700 2.789339 CTGTACAGTTGGATATGCGTCG 59.211 50.000 15.06 0.00 0.00 5.12
687 701 3.123804 CCTGTACAGTTGGATATGCGTC 58.876 50.000 21.18 0.00 0.00 5.19
688 702 2.741878 GCCTGTACAGTTGGATATGCGT 60.742 50.000 21.18 0.00 0.00 5.24
689 703 1.867233 GCCTGTACAGTTGGATATGCG 59.133 52.381 21.18 3.35 0.00 4.73
690 704 2.222027 GGCCTGTACAGTTGGATATGC 58.778 52.381 21.18 13.84 0.00 3.14
691 705 2.102420 TCGGCCTGTACAGTTGGATATG 59.898 50.000 21.18 4.76 0.00 1.78
692 706 2.394632 TCGGCCTGTACAGTTGGATAT 58.605 47.619 21.18 0.00 0.00 1.63
693 707 1.855295 TCGGCCTGTACAGTTGGATA 58.145 50.000 21.18 0.00 0.00 2.59
694 708 0.981183 TTCGGCCTGTACAGTTGGAT 59.019 50.000 21.18 0.00 0.00 3.41
695 709 0.034337 GTTCGGCCTGTACAGTTGGA 59.966 55.000 21.18 11.70 0.00 3.53
696 710 0.250124 TGTTCGGCCTGTACAGTTGG 60.250 55.000 21.18 8.64 0.00 3.77
697 711 1.263217 GTTGTTCGGCCTGTACAGTTG 59.737 52.381 21.18 10.49 0.00 3.16
698 712 1.589803 GTTGTTCGGCCTGTACAGTT 58.410 50.000 21.18 0.00 0.00 3.16
699 713 0.599204 CGTTGTTCGGCCTGTACAGT 60.599 55.000 21.18 0.00 35.71 3.55
700 714 0.319211 TCGTTGTTCGGCCTGTACAG 60.319 55.000 16.34 16.34 40.32 2.74
701 715 0.598158 GTCGTTGTTCGGCCTGTACA 60.598 55.000 0.00 1.86 38.31 2.90
702 716 2.147820 GTCGTTGTTCGGCCTGTAC 58.852 57.895 0.00 0.00 38.31 2.90
703 717 4.659480 GTCGTTGTTCGGCCTGTA 57.341 55.556 0.00 0.00 38.31 2.74
708 722 1.883725 GACTTCGGTCGTTGTTCGGC 61.884 60.000 0.00 0.00 44.07 5.54
709 723 1.280206 GGACTTCGGTCGTTGTTCGG 61.280 60.000 0.00 0.00 45.31 4.30
710 724 1.602877 CGGACTTCGGTCGTTGTTCG 61.603 60.000 5.34 5.34 45.31 3.95
711 725 0.595825 ACGGACTTCGGTCGTTGTTC 60.596 55.000 0.00 0.00 45.31 3.18
712 726 0.595825 GACGGACTTCGGTCGTTGTT 60.596 55.000 1.64 0.00 45.31 2.83
713 727 1.008079 GACGGACTTCGGTCGTTGT 60.008 57.895 1.64 0.00 45.31 3.32
714 728 1.731969 GGACGGACTTCGGTCGTTG 60.732 63.158 9.94 0.00 45.31 4.10
715 729 2.647297 GGACGGACTTCGGTCGTT 59.353 61.111 9.94 0.00 45.31 3.85
716 730 3.368571 GGGACGGACTTCGGTCGT 61.369 66.667 9.94 0.00 45.31 4.34
760 774 2.126071 ACAATCGCCCTGTCGTCG 60.126 61.111 0.00 0.00 0.00 5.12
763 777 1.811266 CCTCACAATCGCCCTGTCG 60.811 63.158 0.00 0.00 0.00 4.35
766 780 1.450312 GGACCTCACAATCGCCCTG 60.450 63.158 0.00 0.00 0.00 4.45
831 846 4.348495 GTGGGTGGGAGGGAGGGA 62.348 72.222 0.00 0.00 0.00 4.20
881 896 3.707189 GGAGGAGGGGAGGGGGAA 61.707 72.222 0.00 0.00 0.00 3.97
931 946 0.888736 TTTGTGGTGGAGCATGACGG 60.889 55.000 0.00 0.00 0.00 4.79
936 951 1.004745 CTAGGGTTTGTGGTGGAGCAT 59.995 52.381 0.00 0.00 0.00 3.79
938 953 0.960861 GCTAGGGTTTGTGGTGGAGC 60.961 60.000 0.00 0.00 0.00 4.70
1134 1149 1.173043 CATCTGCAAAGGCCGGTTTA 58.827 50.000 1.90 0.00 40.13 2.01
1203 1218 7.098477 TCATATTGTCTCCCAAATTTTTGCAG 58.902 34.615 0.00 0.00 36.44 4.41
1243 1327 7.179338 GCTCTTATTAGGATCATACTCCTCCAA 59.821 40.741 0.00 0.00 42.12 3.53
1501 1585 1.340502 GGGCTTCTCTCCCTTTTCCTG 60.341 57.143 0.00 0.00 40.66 3.86
1528 1612 5.320277 CATCCTCTTCTTTTGTTCCTCCTT 58.680 41.667 0.00 0.00 0.00 3.36
1928 2013 1.302832 CCCTTCTTCCGCTTGTGCT 60.303 57.895 0.00 0.00 36.97 4.40
2083 2170 0.033208 ATTTCCATCCGCACCCACAT 60.033 50.000 0.00 0.00 0.00 3.21
2126 2213 4.890158 TTCTAACAGAGGCACATCAGAA 57.110 40.909 0.00 0.00 0.00 3.02
2305 2486 1.774254 TGTTCCTCTTTGCCTCTCCAA 59.226 47.619 0.00 0.00 0.00 3.53
2566 2799 1.233019 CACATCTCCCATCGCAATCC 58.767 55.000 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.