Multiple sequence alignment - TraesCS5D01G118100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G118100 chr5D 100.000 6081 0 0 2556 8636 155840830 155846910 0.000000e+00 11230.0
1 TraesCS5D01G118100 chr5D 100.000 2240 0 0 1 2240 155838275 155840514 0.000000e+00 4137.0
2 TraesCS5D01G118100 chr5D 94.852 1146 53 3 3864 5007 375964665 375965806 0.000000e+00 1784.0
3 TraesCS5D01G118100 chr5D 100.000 319 0 0 8975 9293 155847249 155847567 2.890000e-164 590.0
4 TraesCS5D01G118100 chr5D 91.089 202 16 2 6622 6822 174012025 174012225 1.190000e-68 272.0
5 TraesCS5D01G118100 chr5D 95.570 158 7 0 3864 4021 34868619 34868462 4.310000e-63 254.0
6 TraesCS5D01G118100 chr5D 77.228 202 35 10 3864 4061 437801962 437801768 3.550000e-19 108.0
7 TraesCS5D01G118100 chr5A 98.547 1652 21 2 592 2240 262364934 262363283 0.000000e+00 2915.0
8 TraesCS5D01G118100 chr5A 96.531 1643 31 7 5011 6629 262361661 262360021 0.000000e+00 2695.0
9 TraesCS5D01G118100 chr5A 95.918 1176 35 4 6815 7981 262360028 262358857 0.000000e+00 1893.0
10 TraesCS5D01G118100 chr5A 95.801 1143 40 6 3864 5004 618668055 618669191 0.000000e+00 1838.0
11 TraesCS5D01G118100 chr5A 97.831 922 16 3 2951 3872 262362570 262361653 0.000000e+00 1589.0
12 TraesCS5D01G118100 chr5A 98.190 663 7 4 7977 8634 262353272 262352610 0.000000e+00 1153.0
13 TraesCS5D01G118100 chr5A 96.992 399 12 0 2556 2954 262363217 262362819 0.000000e+00 671.0
14 TraesCS5D01G118100 chr5A 97.806 319 7 0 8975 9293 262352591 262352273 1.360000e-152 551.0
15 TraesCS5D01G118100 chr5A 94.958 119 2 3 479 593 262368243 262368125 5.730000e-42 183.0
16 TraesCS5D01G118100 chr5A 75.943 212 46 4 3864 4073 547212297 547212089 4.590000e-18 104.0
17 TraesCS5D01G118100 chr5B 98.063 1549 25 2 694 2240 181468308 181469853 0.000000e+00 2689.0
18 TraesCS5D01G118100 chr5B 96.390 1468 41 3 7179 8634 181476703 181478170 0.000000e+00 2407.0
19 TraesCS5D01G118100 chr5B 96.261 936 17 5 2951 3872 181470794 181471725 0.000000e+00 1519.0
20 TraesCS5D01G118100 chr5B 94.063 977 48 3 4040 5007 693169422 693170397 0.000000e+00 1474.0
21 TraesCS5D01G118100 chr5B 96.958 789 19 4 5008 5795 181471714 181472498 0.000000e+00 1319.0
22 TraesCS5D01G118100 chr5B 92.991 856 41 12 5787 6627 181475653 181476504 0.000000e+00 1230.0
23 TraesCS5D01G118100 chr5B 95.178 394 13 2 2561 2954 181470144 181470531 1.330000e-172 617.0
24 TraesCS5D01G118100 chr5B 97.812 320 6 1 8975 9293 181478189 181478508 1.360000e-152 551.0
25 TraesCS5D01G118100 chr5B 94.215 242 7 4 517 756 181468085 181468321 6.860000e-96 363.0
26 TraesCS5D01G118100 chr5B 97.183 213 5 1 6815 7027 181476499 181476710 8.870000e-95 359.0
27 TraesCS5D01G118100 chr5B 76.733 202 36 10 3864 4061 531650173 531650367 1.650000e-17 102.0
28 TraesCS5D01G118100 chr1D 95.728 1147 43 5 3864 5007 459431483 459430340 0.000000e+00 1842.0
29 TraesCS5D01G118100 chr1A 94.077 1148 53 7 3864 5004 129394422 129393283 0.000000e+00 1729.0
30 TraesCS5D01G118100 chr1A 92.896 183 13 0 6630 6812 59991996 59991814 5.530000e-67 267.0
31 TraesCS5D01G118100 chr3A 93.386 892 48 5 4119 5006 734064919 734064035 0.000000e+00 1310.0
32 TraesCS5D01G118100 chr3A 96.703 182 6 0 3864 4045 734065433 734065252 4.220000e-78 303.0
33 TraesCS5D01G118100 chr3A 89.394 66 7 0 6815 6880 222448464 222448399 5.980000e-12 84.2
34 TraesCS5D01G118100 chr3A 87.879 66 8 0 6815 6880 222448893 222448828 2.780000e-10 78.7
35 TraesCS5D01G118100 chr4D 90.042 472 28 7 1 461 389520307 389519844 2.230000e-165 593.0
36 TraesCS5D01G118100 chr4D 77.384 367 59 11 113 461 386207104 386207464 7.360000e-46 196.0
37 TraesCS5D01G118100 chr4D 78.125 288 63 0 113 400 498773979 498774266 5.730000e-42 183.0
38 TraesCS5D01G118100 chr4D 89.231 130 9 2 4802 4931 220369117 220369241 3.470000e-34 158.0
39 TraesCS5D01G118100 chr2B 89.286 476 39 6 1 465 200545371 200544897 3.740000e-163 586.0
40 TraesCS5D01G118100 chr4B 86.653 472 50 7 1 461 112043009 112042540 2.310000e-140 510.0
41 TraesCS5D01G118100 chr4B 91.979 187 15 0 6628 6814 134121283 134121097 7.160000e-66 263.0
42 TraesCS5D01G118100 chr4B 90.323 62 3 2 403 461 14753722 14753661 2.780000e-10 78.7
43 TraesCS5D01G118100 chr4B 88.710 62 4 1 403 461 14754224 14754163 1.290000e-08 73.1
44 TraesCS5D01G118100 chr3B 88.746 311 24 6 162 461 53476238 53476548 4.100000e-98 370.0
45 TraesCS5D01G118100 chr6B 84.252 381 31 11 1238 1614 410684077 410683722 2.480000e-90 344.0
46 TraesCS5D01G118100 chr6B 83.990 381 32 12 1238 1614 410236841 410236486 1.160000e-88 339.0
47 TraesCS5D01G118100 chr6B 91.414 198 17 0 4810 5007 497891207 497891010 1.190000e-68 272.0
48 TraesCS5D01G118100 chr4A 83.636 385 44 10 1238 1614 116323286 116322913 2.480000e-90 344.0
49 TraesCS5D01G118100 chr2A 83.377 385 45 10 1238 1614 304601059 304600686 1.160000e-88 339.0
50 TraesCS5D01G118100 chr2A 92.513 187 14 0 6628 6814 601333355 601333169 1.540000e-67 268.0
51 TraesCS5D01G118100 chr2A 86.170 94 13 0 4922 5015 407348433 407348526 1.650000e-17 102.0
52 TraesCS5D01G118100 chr7D 94.054 185 11 0 6628 6812 414518665 414518849 1.980000e-71 281.0
53 TraesCS5D01G118100 chr7D 89.024 164 12 5 1880 2039 87191954 87192115 2.050000e-46 198.0
54 TraesCS5D01G118100 chr7D 86.111 144 16 3 5765 5904 509575638 509575495 1.620000e-32 152.0
55 TraesCS5D01G118100 chr7D 88.288 111 12 1 6967 7076 509574830 509574720 2.110000e-26 132.0
56 TraesCS5D01G118100 chr7B 93.514 185 12 0 6631 6815 587916985 587917169 9.190000e-70 276.0
57 TraesCS5D01G118100 chr7A 93.923 181 11 0 6632 6812 504219979 504220159 3.310000e-69 274.0
58 TraesCS5D01G118100 chr7A 89.744 156 9 6 1889 2039 299314245 299314092 9.520000e-45 193.0
59 TraesCS5D01G118100 chrUn 93.011 186 13 0 6629 6814 67785113 67784928 1.190000e-68 272.0
60 TraesCS5D01G118100 chrUn 87.324 142 16 1 5765 5904 46078531 46078672 2.690000e-35 161.0
61 TraesCS5D01G118100 chr6A 89.048 210 23 0 4798 5007 463525095 463525304 2.570000e-65 261.0
62 TraesCS5D01G118100 chr6A 82.432 222 29 5 4512 4733 463524232 463524443 1.590000e-42 185.0
63 TraesCS5D01G118100 chr6A 81.022 137 26 0 263 399 472377807 472377671 9.870000e-20 110.0
64 TraesCS5D01G118100 chr1B 91.489 188 16 0 6628 6815 261019485 261019672 9.260000e-65 259.0
65 TraesCS5D01G118100 chr3D 90.385 156 8 6 1889 2039 146193061 146192908 2.050000e-46 198.0
66 TraesCS5D01G118100 chr3D 76.096 251 48 9 152 396 535602505 535602749 4.560000e-23 121.0
67 TraesCS5D01G118100 chr6D 85.380 171 21 3 6967 7136 271097266 271097099 3.450000e-39 174.0
68 TraesCS5D01G118100 chr2D 77.431 288 65 0 113 400 424669071 424669358 1.240000e-38 172.0
69 TraesCS5D01G118100 chr2D 81.667 120 18 4 2660 2779 139783950 139783835 7.680000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G118100 chr5D 155838275 155847567 9292 False 5319.000000 11230 100.000000 1 9293 3 chr5D.!!$F3 9292
1 TraesCS5D01G118100 chr5D 375964665 375965806 1141 False 1784.000000 1784 94.852000 3864 5007 1 chr5D.!!$F2 1143
2 TraesCS5D01G118100 chr5A 618668055 618669191 1136 False 1838.000000 1838 95.801000 3864 5004 1 chr5A.!!$F1 1140
3 TraesCS5D01G118100 chr5A 262358857 262368243 9386 True 1657.666667 2915 96.796167 479 7981 6 chr5A.!!$R3 7502
4 TraesCS5D01G118100 chr5A 262352273 262353272 999 True 852.000000 1153 97.998000 7977 9293 2 chr5A.!!$R2 1316
5 TraesCS5D01G118100 chr5B 693169422 693170397 975 False 1474.000000 1474 94.063000 4040 5007 1 chr5B.!!$F2 967
6 TraesCS5D01G118100 chr5B 181468085 181478508 10423 False 1228.222222 2689 96.116778 517 9293 9 chr5B.!!$F3 8776
7 TraesCS5D01G118100 chr1D 459430340 459431483 1143 True 1842.000000 1842 95.728000 3864 5007 1 chr1D.!!$R1 1143
8 TraesCS5D01G118100 chr1A 129393283 129394422 1139 True 1729.000000 1729 94.077000 3864 5004 1 chr1A.!!$R2 1140
9 TraesCS5D01G118100 chr3A 734064035 734065433 1398 True 806.500000 1310 95.044500 3864 5006 2 chr3A.!!$R2 1142
10 TraesCS5D01G118100 chr6A 463524232 463525304 1072 False 223.000000 261 85.740000 4512 5007 2 chr6A.!!$F1 495

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
234 235 0.033366 TGGACGATATCATGCACCGG 59.967 55.000 0.00 0.00 0.00 5.28 F
393 394 0.110678 TGGGTCGCCATGTTTGGTTA 59.889 50.000 0.00 0.00 45.57 2.85 F
1139 4385 0.402419 AGGGGCCATCATGAGATCCA 60.402 55.000 4.39 0.00 30.20 3.41 F
2581 5829 0.529337 CAGAGATGCCGCTAGTGTGG 60.529 60.000 1.99 0.00 46.17 4.17 F
4439 8249 1.204941 GCACAGGAGTAGATCAACGGT 59.795 52.381 0.00 0.00 0.00 4.83 F
4498 8311 1.488705 AAGTCCGGTGATGAAGGGCA 61.489 55.000 0.00 0.00 30.78 5.36 F
6254 13846 0.457035 CCATGGAAAGGCAACGGATG 59.543 55.000 5.56 0.00 46.39 3.51 F
7099 14691 0.036388 CCGCATTACCACTGTCCACT 60.036 55.000 0.00 0.00 0.00 4.00 F
7638 15243 0.611618 ATGGATTGCGGCAGTTTCCA 60.612 50.000 24.28 24.28 40.54 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1282 4528 0.251341 AGCCTGCGGAAATCAACCTT 60.251 50.000 0.00 0.0 0.00 3.50 R
1378 4624 3.871006 GCGATGATCATGTTAAGGTGACA 59.129 43.478 14.30 0.0 0.00 3.58 R
2600 5848 3.997952 GCCTTTTGCCCTCCCCCT 61.998 66.667 0.00 0.0 0.00 4.79 R
4509 8322 0.337773 TGAGATGTCCAGCTCCCTCT 59.662 55.000 9.82 0.0 42.79 3.69 R
6136 13728 2.089201 CTGCAGCAATGATGGAAGACA 58.911 47.619 0.00 0.0 0.00 3.41 R
6474 14066 7.297936 TGGACTATCTTGTTTCTGTCTTACA 57.702 36.000 0.00 0.0 0.00 2.41 R
7156 14749 0.032130 GGATCGAGCGGAAGTATGCA 59.968 55.000 0.00 0.0 0.00 3.96 R
8073 15678 0.321996 GGAAGGTCGCTTCAGGACTT 59.678 55.000 5.35 0.0 35.19 3.01 R
8561 16171 1.503818 TTCCAAAGTCGAAGCCACGC 61.504 55.000 0.00 0.0 0.00 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 5.204673 GTTGCAAACGTACATAGAAGAGG 57.795 43.478 0.00 0.00 36.92 3.69
36 37 4.794278 TGCAAACGTACATAGAAGAGGA 57.206 40.909 0.00 0.00 0.00 3.71
37 38 4.744570 TGCAAACGTACATAGAAGAGGAG 58.255 43.478 0.00 0.00 0.00 3.69
38 39 3.552294 GCAAACGTACATAGAAGAGGAGC 59.448 47.826 0.00 0.00 0.00 4.70
39 40 4.678309 GCAAACGTACATAGAAGAGGAGCT 60.678 45.833 0.00 0.00 0.00 4.09
40 41 4.640789 AACGTACATAGAAGAGGAGCTG 57.359 45.455 0.00 0.00 0.00 4.24
41 42 3.622630 ACGTACATAGAAGAGGAGCTGT 58.377 45.455 0.00 0.00 0.00 4.40
42 43 4.017808 ACGTACATAGAAGAGGAGCTGTT 58.982 43.478 0.00 0.00 0.00 3.16
43 44 4.142359 ACGTACATAGAAGAGGAGCTGTTG 60.142 45.833 0.00 0.00 0.00 3.33
44 45 3.258971 ACATAGAAGAGGAGCTGTTGC 57.741 47.619 0.00 0.00 40.05 4.17
70 71 4.898002 GCAGAGAGCATGACGACA 57.102 55.556 0.00 0.00 44.79 4.35
71 72 3.128259 GCAGAGAGCATGACGACAA 57.872 52.632 0.00 0.00 44.79 3.18
72 73 0.718343 GCAGAGAGCATGACGACAAC 59.282 55.000 0.00 0.00 44.79 3.32
73 74 1.671261 GCAGAGAGCATGACGACAACT 60.671 52.381 0.00 0.00 44.79 3.16
74 75 2.681706 CAGAGAGCATGACGACAACTT 58.318 47.619 0.00 0.00 0.00 2.66
75 76 3.062763 CAGAGAGCATGACGACAACTTT 58.937 45.455 0.00 0.00 0.00 2.66
76 77 3.122613 CAGAGAGCATGACGACAACTTTC 59.877 47.826 0.00 0.00 0.00 2.62
77 78 3.006323 AGAGAGCATGACGACAACTTTCT 59.994 43.478 0.00 7.93 0.00 2.52
78 79 3.733337 AGAGCATGACGACAACTTTCTT 58.267 40.909 0.00 0.00 0.00 2.52
79 80 3.496130 AGAGCATGACGACAACTTTCTTG 59.504 43.478 0.00 0.00 0.00 3.02
80 81 2.549754 AGCATGACGACAACTTTCTTGG 59.450 45.455 0.00 0.00 0.00 3.61
81 82 2.548057 GCATGACGACAACTTTCTTGGA 59.452 45.455 0.00 0.00 0.00 3.53
82 83 3.364366 GCATGACGACAACTTTCTTGGAG 60.364 47.826 0.00 0.00 0.00 3.86
83 84 2.210116 TGACGACAACTTTCTTGGAGC 58.790 47.619 0.00 0.00 0.00 4.70
84 85 2.158957 TGACGACAACTTTCTTGGAGCT 60.159 45.455 0.00 0.00 0.00 4.09
85 86 2.872858 GACGACAACTTTCTTGGAGCTT 59.127 45.455 0.00 0.00 0.00 3.74
86 87 2.872858 ACGACAACTTTCTTGGAGCTTC 59.127 45.455 0.00 0.00 0.00 3.86
87 88 2.872245 CGACAACTTTCTTGGAGCTTCA 59.128 45.455 0.00 0.00 0.00 3.02
88 89 3.059325 CGACAACTTTCTTGGAGCTTCAG 60.059 47.826 0.00 0.00 0.00 3.02
89 90 3.879892 GACAACTTTCTTGGAGCTTCAGT 59.120 43.478 0.00 0.00 0.00 3.41
90 91 3.629398 ACAACTTTCTTGGAGCTTCAGTG 59.371 43.478 0.00 0.00 0.00 3.66
91 92 3.845781 ACTTTCTTGGAGCTTCAGTGA 57.154 42.857 0.00 0.00 0.00 3.41
92 93 4.363991 ACTTTCTTGGAGCTTCAGTGAT 57.636 40.909 0.00 0.00 0.00 3.06
93 94 4.322567 ACTTTCTTGGAGCTTCAGTGATC 58.677 43.478 0.00 0.00 0.00 2.92
94 95 4.202398 ACTTTCTTGGAGCTTCAGTGATCA 60.202 41.667 0.00 0.00 0.00 2.92
95 96 4.564782 TTCTTGGAGCTTCAGTGATCAT 57.435 40.909 0.00 0.00 0.00 2.45
96 97 4.564782 TCTTGGAGCTTCAGTGATCATT 57.435 40.909 0.00 0.00 0.00 2.57
97 98 5.682234 TCTTGGAGCTTCAGTGATCATTA 57.318 39.130 0.00 0.00 0.00 1.90
98 99 6.244552 TCTTGGAGCTTCAGTGATCATTAT 57.755 37.500 0.00 0.00 0.00 1.28
99 100 6.656902 TCTTGGAGCTTCAGTGATCATTATT 58.343 36.000 0.00 0.00 0.00 1.40
100 101 7.795047 TCTTGGAGCTTCAGTGATCATTATTA 58.205 34.615 0.00 0.00 0.00 0.98
101 102 7.930325 TCTTGGAGCTTCAGTGATCATTATTAG 59.070 37.037 0.00 0.00 0.00 1.73
102 103 7.365497 TGGAGCTTCAGTGATCATTATTAGA 57.635 36.000 0.00 0.00 0.00 2.10
103 104 7.440198 TGGAGCTTCAGTGATCATTATTAGAG 58.560 38.462 0.00 0.00 0.00 2.43
104 105 6.873076 GGAGCTTCAGTGATCATTATTAGAGG 59.127 42.308 0.00 0.00 0.00 3.69
105 106 7.372260 AGCTTCAGTGATCATTATTAGAGGT 57.628 36.000 0.00 0.00 0.00 3.85
106 107 8.484214 AGCTTCAGTGATCATTATTAGAGGTA 57.516 34.615 0.00 0.00 0.00 3.08
107 108 9.099071 AGCTTCAGTGATCATTATTAGAGGTAT 57.901 33.333 0.00 0.00 0.00 2.73
112 113 9.574458 CAGTGATCATTATTAGAGGTATAACCG 57.426 37.037 0.00 0.00 44.90 4.44
113 114 9.529823 AGTGATCATTATTAGAGGTATAACCGA 57.470 33.333 0.00 0.00 44.90 4.69
116 117 9.968870 GATCATTATTAGAGGTATAACCGATCC 57.031 37.037 0.00 0.00 44.90 3.36
117 118 7.993101 TCATTATTAGAGGTATAACCGATCCG 58.007 38.462 0.00 0.00 44.90 4.18
118 119 7.830697 TCATTATTAGAGGTATAACCGATCCGA 59.169 37.037 0.00 0.00 44.90 4.55
119 120 5.893897 ATTAGAGGTATAACCGATCCGAC 57.106 43.478 0.00 0.00 44.90 4.79
120 121 3.219176 AGAGGTATAACCGATCCGACA 57.781 47.619 0.00 0.00 44.90 4.35
121 122 3.559069 AGAGGTATAACCGATCCGACAA 58.441 45.455 0.00 0.00 44.90 3.18
122 123 3.317430 AGAGGTATAACCGATCCGACAAC 59.683 47.826 0.00 0.00 44.90 3.32
123 124 3.025978 AGGTATAACCGATCCGACAACA 58.974 45.455 0.00 0.00 44.90 3.33
124 125 3.118542 GGTATAACCGATCCGACAACAC 58.881 50.000 0.00 0.00 0.00 3.32
125 126 3.181483 GGTATAACCGATCCGACAACACT 60.181 47.826 0.00 0.00 0.00 3.55
126 127 2.357327 TAACCGATCCGACAACACTG 57.643 50.000 0.00 0.00 0.00 3.66
127 128 0.320421 AACCGATCCGACAACACTGG 60.320 55.000 0.00 0.00 0.00 4.00
128 129 1.183030 ACCGATCCGACAACACTGGA 61.183 55.000 0.00 0.00 35.96 3.86
129 130 0.458543 CCGATCCGACAACACTGGAG 60.459 60.000 0.00 0.00 34.75 3.86
130 131 0.458543 CGATCCGACAACACTGGAGG 60.459 60.000 0.00 0.00 34.75 4.30
131 132 0.741221 GATCCGACAACACTGGAGGC 60.741 60.000 0.00 0.00 34.75 4.70
132 133 1.194781 ATCCGACAACACTGGAGGCT 61.195 55.000 0.00 0.00 34.75 4.58
133 134 1.374758 CCGACAACACTGGAGGCTC 60.375 63.158 5.78 5.78 0.00 4.70
134 135 1.668294 CGACAACACTGGAGGCTCT 59.332 57.895 15.23 0.00 0.00 4.09
135 136 0.034059 CGACAACACTGGAGGCTCTT 59.966 55.000 15.23 0.00 0.00 2.85
136 137 1.517242 GACAACACTGGAGGCTCTTG 58.483 55.000 15.23 12.65 0.00 3.02
137 138 0.536006 ACAACACTGGAGGCTCTTGC 60.536 55.000 15.23 0.00 38.76 4.01
138 139 0.250640 CAACACTGGAGGCTCTTGCT 60.251 55.000 15.23 0.00 39.59 3.91
139 140 0.250640 AACACTGGAGGCTCTTGCTG 60.251 55.000 15.23 7.37 39.59 4.41
140 141 1.374190 CACTGGAGGCTCTTGCTGT 59.626 57.895 15.23 5.28 39.59 4.40
141 142 0.673022 CACTGGAGGCTCTTGCTGTC 60.673 60.000 15.23 0.00 39.59 3.51
142 143 1.078567 CTGGAGGCTCTTGCTGTCC 60.079 63.158 15.23 0.00 40.41 4.02
143 144 2.125350 GGAGGCTCTTGCTGTCCG 60.125 66.667 15.23 0.00 39.59 4.79
144 145 2.125350 GAGGCTCTTGCTGTCCGG 60.125 66.667 7.40 0.00 39.59 5.14
145 146 3.672295 GAGGCTCTTGCTGTCCGGG 62.672 68.421 7.40 0.00 39.59 5.73
146 147 3.706373 GGCTCTTGCTGTCCGGGA 61.706 66.667 0.00 0.00 39.59 5.14
147 148 2.125350 GCTCTTGCTGTCCGGGAG 60.125 66.667 0.00 0.00 36.03 4.30
148 149 3.672295 GCTCTTGCTGTCCGGGAGG 62.672 68.421 0.00 0.00 43.87 4.30
159 160 4.177673 CGGGAGGTACTAGCCCTC 57.822 66.667 17.10 17.10 46.49 4.30
162 163 3.445888 GAGGTACTAGCCCTCGCC 58.554 66.667 12.04 0.00 41.55 5.54
163 164 2.518825 AGGTACTAGCCCTCGCCG 60.519 66.667 0.00 0.00 36.02 6.46
164 165 2.517875 GGTACTAGCCCTCGCCGA 60.518 66.667 0.00 0.00 34.57 5.54
165 166 2.553727 GGTACTAGCCCTCGCCGAG 61.554 68.421 7.25 7.25 34.57 4.63
175 176 2.384203 CTCGCCGAGGATTTGAACC 58.616 57.895 6.13 0.00 0.00 3.62
176 177 0.391130 CTCGCCGAGGATTTGAACCA 60.391 55.000 6.13 0.00 0.00 3.67
177 178 0.035598 TCGCCGAGGATTTGAACCAA 59.964 50.000 0.00 0.00 0.00 3.67
178 179 0.168128 CGCCGAGGATTTGAACCAAC 59.832 55.000 0.00 0.00 0.00 3.77
179 180 0.168128 GCCGAGGATTTGAACCAACG 59.832 55.000 0.00 0.00 0.00 4.10
180 181 0.802494 CCGAGGATTTGAACCAACGG 59.198 55.000 0.00 0.00 40.53 4.44
181 182 1.609580 CCGAGGATTTGAACCAACGGA 60.610 52.381 0.00 0.00 44.87 4.69
182 183 1.732259 CGAGGATTTGAACCAACGGAG 59.268 52.381 0.00 0.00 0.00 4.63
183 184 2.611971 CGAGGATTTGAACCAACGGAGA 60.612 50.000 0.00 0.00 0.00 3.71
184 185 3.408634 GAGGATTTGAACCAACGGAGAA 58.591 45.455 0.00 0.00 0.00 2.87
185 186 4.010349 GAGGATTTGAACCAACGGAGAAT 58.990 43.478 0.00 0.00 0.00 2.40
186 187 4.407365 AGGATTTGAACCAACGGAGAATT 58.593 39.130 0.00 0.00 0.00 2.17
187 188 4.459337 AGGATTTGAACCAACGGAGAATTC 59.541 41.667 0.00 0.00 0.00 2.17
188 189 4.217550 GGATTTGAACCAACGGAGAATTCA 59.782 41.667 8.44 0.00 0.00 2.57
189 190 4.561735 TTTGAACCAACGGAGAATTCAC 57.438 40.909 8.44 0.52 0.00 3.18
190 191 2.139917 TGAACCAACGGAGAATTCACG 58.860 47.619 17.50 17.50 0.00 4.35
191 192 2.140717 GAACCAACGGAGAATTCACGT 58.859 47.619 18.60 18.60 43.43 4.49
195 196 3.299050 ACGGAGAATTCACGTTGCA 57.701 47.368 18.60 0.00 37.61 4.08
196 197 1.808411 ACGGAGAATTCACGTTGCAT 58.192 45.000 18.60 0.94 37.61 3.96
197 198 1.732259 ACGGAGAATTCACGTTGCATC 59.268 47.619 18.60 1.28 37.61 3.91
198 199 1.062587 CGGAGAATTCACGTTGCATCC 59.937 52.381 8.44 2.25 0.00 3.51
199 200 1.062587 GGAGAATTCACGTTGCATCCG 59.937 52.381 8.44 4.89 0.00 4.18
200 201 1.999735 GAGAATTCACGTTGCATCCGA 59.000 47.619 8.44 0.00 0.00 4.55
201 202 2.609459 GAGAATTCACGTTGCATCCGAT 59.391 45.455 8.44 0.00 0.00 4.18
202 203 3.009723 AGAATTCACGTTGCATCCGATT 58.990 40.909 8.44 3.09 0.00 3.34
203 204 2.830772 ATTCACGTTGCATCCGATTG 57.169 45.000 12.59 2.67 0.00 2.67
204 205 0.167908 TTCACGTTGCATCCGATTGC 59.832 50.000 12.59 2.95 43.07 3.56
211 212 1.434696 GCATCCGATTGCAAGGTGG 59.565 57.895 4.94 6.67 42.31 4.61
212 213 1.315257 GCATCCGATTGCAAGGTGGT 61.315 55.000 4.94 0.00 42.31 4.16
213 214 0.452987 CATCCGATTGCAAGGTGGTG 59.547 55.000 4.94 0.00 0.00 4.17
214 215 0.680921 ATCCGATTGCAAGGTGGTGG 60.681 55.000 4.94 0.27 0.00 4.61
215 216 1.603455 CCGATTGCAAGGTGGTGGT 60.603 57.895 4.94 0.00 0.00 4.16
216 217 1.580942 CGATTGCAAGGTGGTGGTG 59.419 57.895 4.94 0.00 0.00 4.17
217 218 1.865788 CGATTGCAAGGTGGTGGTGG 61.866 60.000 4.94 0.00 0.00 4.61
218 219 0.539438 GATTGCAAGGTGGTGGTGGA 60.539 55.000 4.94 0.00 0.00 4.02
219 220 0.827507 ATTGCAAGGTGGTGGTGGAC 60.828 55.000 4.94 0.00 0.00 4.02
220 221 2.978010 GCAAGGTGGTGGTGGACG 60.978 66.667 0.00 0.00 0.00 4.79
221 222 2.825982 CAAGGTGGTGGTGGACGA 59.174 61.111 0.00 0.00 0.00 4.20
222 223 1.374947 CAAGGTGGTGGTGGACGAT 59.625 57.895 0.00 0.00 0.00 3.73
223 224 0.611200 CAAGGTGGTGGTGGACGATA 59.389 55.000 0.00 0.00 0.00 2.92
224 225 1.209504 CAAGGTGGTGGTGGACGATAT 59.790 52.381 0.00 0.00 0.00 1.63
225 226 1.120530 AGGTGGTGGTGGACGATATC 58.879 55.000 0.00 0.00 0.00 1.63
226 227 0.828022 GGTGGTGGTGGACGATATCA 59.172 55.000 3.12 0.00 0.00 2.15
227 228 1.416401 GGTGGTGGTGGACGATATCAT 59.584 52.381 3.12 0.00 0.00 2.45
228 229 2.483876 GTGGTGGTGGACGATATCATG 58.516 52.381 3.12 0.00 0.00 3.07
229 230 1.202639 TGGTGGTGGACGATATCATGC 60.203 52.381 3.12 0.00 0.00 4.06
230 231 1.202639 GGTGGTGGACGATATCATGCA 60.203 52.381 3.12 0.00 0.00 3.96
231 232 1.867233 GTGGTGGACGATATCATGCAC 59.133 52.381 14.22 14.22 0.00 4.57
232 233 1.202639 TGGTGGACGATATCATGCACC 60.203 52.381 29.08 29.08 37.56 5.01
233 234 1.139989 GTGGACGATATCATGCACCG 58.860 55.000 11.86 0.00 0.00 4.94
234 235 0.033366 TGGACGATATCATGCACCGG 59.967 55.000 0.00 0.00 0.00 5.28
235 236 0.317160 GGACGATATCATGCACCGGA 59.683 55.000 9.46 0.00 0.00 5.14
236 237 1.670087 GGACGATATCATGCACCGGAG 60.670 57.143 9.46 0.00 0.00 4.63
237 238 1.000163 GACGATATCATGCACCGGAGT 60.000 52.381 9.46 0.00 0.00 3.85
238 239 1.000163 ACGATATCATGCACCGGAGTC 60.000 52.381 9.46 0.00 0.00 3.36
239 240 1.270826 CGATATCATGCACCGGAGTCT 59.729 52.381 9.46 0.00 0.00 3.24
240 241 2.681706 GATATCATGCACCGGAGTCTG 58.318 52.381 9.46 2.08 0.00 3.51
241 242 0.752658 TATCATGCACCGGAGTCTGG 59.247 55.000 17.01 17.01 0.00 3.86
242 243 2.599645 ATCATGCACCGGAGTCTGGC 62.600 60.000 18.54 5.58 0.00 4.85
243 244 4.101448 ATGCACCGGAGTCTGGCC 62.101 66.667 18.54 9.92 0.00 5.36
245 246 4.767255 GCACCGGAGTCTGGCCAG 62.767 72.222 27.87 27.87 0.00 4.85
246 247 4.767255 CACCGGAGTCTGGCCAGC 62.767 72.222 28.91 21.95 0.00 4.85
248 249 2.759973 CCGGAGTCTGGCCAGCTA 60.760 66.667 28.91 9.28 0.00 3.32
249 250 2.136878 CCGGAGTCTGGCCAGCTAT 61.137 63.158 28.91 15.72 0.00 2.97
250 251 1.068753 CGGAGTCTGGCCAGCTATG 59.931 63.158 28.91 17.89 0.00 2.23
266 267 6.034161 CAGCTATGGAGTCATCATACATGA 57.966 41.667 0.00 0.00 41.70 3.07
267 268 6.461640 CAGCTATGGAGTCATCATACATGAA 58.538 40.000 0.00 0.00 40.69 2.57
268 269 7.104290 CAGCTATGGAGTCATCATACATGAAT 58.896 38.462 0.00 0.00 40.69 2.57
269 270 7.606839 CAGCTATGGAGTCATCATACATGAATT 59.393 37.037 0.00 0.00 40.69 2.17
270 271 8.162085 AGCTATGGAGTCATCATACATGAATTT 58.838 33.333 0.00 0.00 40.69 1.82
271 272 9.440773 GCTATGGAGTCATCATACATGAATTTA 57.559 33.333 0.00 0.00 40.69 1.40
275 276 9.440773 TGGAGTCATCATACATGAATTTATAGC 57.559 33.333 0.00 0.00 40.69 2.97
276 277 8.887717 GGAGTCATCATACATGAATTTATAGCC 58.112 37.037 0.00 0.00 40.69 3.93
277 278 9.664332 GAGTCATCATACATGAATTTATAGCCT 57.336 33.333 0.00 0.00 40.69 4.58
316 317 9.295825 TCATTTTATGTAACTTTGTCCATGAGT 57.704 29.630 0.00 0.00 0.00 3.41
317 318 9.912634 CATTTTATGTAACTTTGTCCATGAGTT 57.087 29.630 0.00 0.00 37.40 3.01
321 322 7.687941 ATGTAACTTTGTCCATGAGTTTAGG 57.312 36.000 0.00 0.00 35.43 2.69
322 323 6.833041 TGTAACTTTGTCCATGAGTTTAGGA 58.167 36.000 0.00 0.00 35.43 2.94
323 324 6.934645 TGTAACTTTGTCCATGAGTTTAGGAG 59.065 38.462 0.00 0.00 35.43 3.69
324 325 5.568620 ACTTTGTCCATGAGTTTAGGAGT 57.431 39.130 0.00 0.00 30.78 3.85
325 326 5.941788 ACTTTGTCCATGAGTTTAGGAGTT 58.058 37.500 0.00 0.00 30.78 3.01
326 327 5.998363 ACTTTGTCCATGAGTTTAGGAGTTC 59.002 40.000 0.00 0.00 30.78 3.01
327 328 4.553330 TGTCCATGAGTTTAGGAGTTCC 57.447 45.455 0.00 0.00 30.78 3.62
328 329 3.907474 TGTCCATGAGTTTAGGAGTTCCA 59.093 43.478 0.00 0.00 38.89 3.53
329 330 4.349636 TGTCCATGAGTTTAGGAGTTCCAA 59.650 41.667 0.00 0.00 38.89 3.53
330 331 4.695928 GTCCATGAGTTTAGGAGTTCCAAC 59.304 45.833 0.00 0.00 38.89 3.77
331 332 4.597507 TCCATGAGTTTAGGAGTTCCAACT 59.402 41.667 0.00 2.52 43.16 3.16
332 333 5.073144 TCCATGAGTTTAGGAGTTCCAACTT 59.927 40.000 0.00 0.00 39.88 2.66
333 334 5.770162 CCATGAGTTTAGGAGTTCCAACTTT 59.230 40.000 0.00 0.00 39.88 2.66
334 335 6.940298 CCATGAGTTTAGGAGTTCCAACTTTA 59.060 38.462 0.00 0.00 39.88 1.85
335 336 7.447238 CCATGAGTTTAGGAGTTCCAACTTTAA 59.553 37.037 0.00 0.00 39.88 1.52
336 337 8.846211 CATGAGTTTAGGAGTTCCAACTTTAAA 58.154 33.333 0.28 0.92 39.88 1.52
337 338 8.810990 TGAGTTTAGGAGTTCCAACTTTAAAA 57.189 30.769 0.28 2.78 39.88 1.52
338 339 8.680001 TGAGTTTAGGAGTTCCAACTTTAAAAC 58.320 33.333 0.28 12.21 39.88 2.43
339 340 8.818622 AGTTTAGGAGTTCCAACTTTAAAACT 57.181 30.769 14.78 14.78 39.88 2.66
340 341 8.900781 AGTTTAGGAGTTCCAACTTTAAAACTC 58.099 33.333 14.78 6.85 44.33 3.01
341 342 8.680001 GTTTAGGAGTTCCAACTTTAAAACTCA 58.320 33.333 14.34 0.00 45.98 3.41
342 343 6.694877 AGGAGTTCCAACTTTAAAACTCAC 57.305 37.500 14.34 6.75 45.98 3.51
343 344 6.184789 AGGAGTTCCAACTTTAAAACTCACA 58.815 36.000 14.34 0.00 45.98 3.58
344 345 6.661805 AGGAGTTCCAACTTTAAAACTCACAA 59.338 34.615 14.34 0.00 45.98 3.33
345 346 7.342026 AGGAGTTCCAACTTTAAAACTCACAAT 59.658 33.333 14.34 0.00 45.98 2.71
346 347 7.979537 GGAGTTCCAACTTTAAAACTCACAATT 59.020 33.333 14.34 0.00 45.98 2.32
347 348 9.366216 GAGTTCCAACTTTAAAACTCACAATTT 57.634 29.630 9.55 0.00 44.41 1.82
350 351 8.865590 TCCAACTTTAAAACTCACAATTTAGC 57.134 30.769 0.00 0.00 0.00 3.09
351 352 7.646130 TCCAACTTTAAAACTCACAATTTAGCG 59.354 33.333 0.00 0.00 0.00 4.26
352 353 7.646130 CCAACTTTAAAACTCACAATTTAGCGA 59.354 33.333 0.00 0.00 0.00 4.93
353 354 9.015577 CAACTTTAAAACTCACAATTTAGCGAA 57.984 29.630 0.00 0.00 0.00 4.70
354 355 8.782533 ACTTTAAAACTCACAATTTAGCGAAG 57.217 30.769 0.00 0.00 0.00 3.79
372 373 4.107622 CGAAGCATGCTTTGAAATTAGGG 58.892 43.478 35.09 11.93 39.23 3.53
373 374 4.142403 CGAAGCATGCTTTGAAATTAGGGA 60.142 41.667 35.09 0.00 39.23 4.20
374 375 5.450965 CGAAGCATGCTTTGAAATTAGGGAT 60.451 40.000 35.09 10.04 39.23 3.85
375 376 5.272283 AGCATGCTTTGAAATTAGGGATG 57.728 39.130 16.30 0.00 0.00 3.51
376 377 4.100498 AGCATGCTTTGAAATTAGGGATGG 59.900 41.667 16.30 0.00 0.00 3.51
377 378 4.741536 GCATGCTTTGAAATTAGGGATGGG 60.742 45.833 11.37 0.00 0.00 4.00
378 379 4.059773 TGCTTTGAAATTAGGGATGGGT 57.940 40.909 0.00 0.00 0.00 4.51
379 380 4.023291 TGCTTTGAAATTAGGGATGGGTC 58.977 43.478 0.00 0.00 0.00 4.46
380 381 3.066760 GCTTTGAAATTAGGGATGGGTCG 59.933 47.826 0.00 0.00 0.00 4.79
381 382 2.341846 TGAAATTAGGGATGGGTCGC 57.658 50.000 0.00 0.00 37.56 5.19
382 383 1.133915 TGAAATTAGGGATGGGTCGCC 60.134 52.381 0.00 0.00 38.00 5.54
383 384 0.923358 AAATTAGGGATGGGTCGCCA 59.077 50.000 0.00 0.00 38.00 5.69
384 385 1.149101 AATTAGGGATGGGTCGCCAT 58.851 50.000 0.00 0.00 38.00 4.40
385 386 0.401738 ATTAGGGATGGGTCGCCATG 59.598 55.000 0.00 0.00 38.00 3.66
386 387 0.986019 TTAGGGATGGGTCGCCATGT 60.986 55.000 0.00 0.00 38.00 3.21
387 388 0.986019 TAGGGATGGGTCGCCATGTT 60.986 55.000 0.00 0.00 38.00 2.71
388 389 1.379843 GGGATGGGTCGCCATGTTT 60.380 57.895 0.00 0.00 0.00 2.83
389 390 1.666209 GGGATGGGTCGCCATGTTTG 61.666 60.000 0.00 0.00 0.00 2.93
390 391 1.666209 GGATGGGTCGCCATGTTTGG 61.666 60.000 0.00 0.00 46.66 3.28
391 392 0.965363 GATGGGTCGCCATGTTTGGT 60.965 55.000 0.00 0.00 45.57 3.67
392 393 0.541764 ATGGGTCGCCATGTTTGGTT 60.542 50.000 0.00 0.00 45.57 3.67
393 394 0.110678 TGGGTCGCCATGTTTGGTTA 59.889 50.000 0.00 0.00 45.57 2.85
394 395 0.808755 GGGTCGCCATGTTTGGTTAG 59.191 55.000 0.00 0.00 45.57 2.34
395 396 0.808755 GGTCGCCATGTTTGGTTAGG 59.191 55.000 0.00 0.00 45.57 2.69
396 397 1.612199 GGTCGCCATGTTTGGTTAGGA 60.612 52.381 0.00 0.00 45.57 2.94
397 398 1.467342 GTCGCCATGTTTGGTTAGGAC 59.533 52.381 0.00 0.00 45.57 3.85
398 399 1.072489 TCGCCATGTTTGGTTAGGACA 59.928 47.619 0.00 0.00 45.57 4.02
399 400 1.199097 CGCCATGTTTGGTTAGGACAC 59.801 52.381 0.00 0.00 45.57 3.67
400 401 2.514803 GCCATGTTTGGTTAGGACACT 58.485 47.619 0.00 0.00 45.57 3.55
401 402 2.890945 GCCATGTTTGGTTAGGACACTT 59.109 45.455 0.00 0.00 45.57 3.16
402 403 3.320826 GCCATGTTTGGTTAGGACACTTT 59.679 43.478 0.00 0.00 45.57 2.66
403 404 4.795962 GCCATGTTTGGTTAGGACACTTTG 60.796 45.833 0.00 0.00 45.57 2.77
404 405 4.582656 CCATGTTTGGTTAGGACACTTTGA 59.417 41.667 0.00 0.00 38.30 2.69
405 406 5.243730 CCATGTTTGGTTAGGACACTTTGAT 59.756 40.000 0.00 0.00 38.30 2.57
406 407 5.766150 TGTTTGGTTAGGACACTTTGATG 57.234 39.130 0.00 0.00 0.00 3.07
407 408 5.197451 TGTTTGGTTAGGACACTTTGATGT 58.803 37.500 0.00 0.00 34.78 3.06
408 409 5.654650 TGTTTGGTTAGGACACTTTGATGTT 59.345 36.000 0.00 0.00 31.24 2.71
409 410 6.183360 TGTTTGGTTAGGACACTTTGATGTTC 60.183 38.462 0.00 0.00 31.24 3.18
410 411 4.062293 TGGTTAGGACACTTTGATGTTCG 58.938 43.478 0.00 0.00 32.83 3.95
411 412 4.062991 GGTTAGGACACTTTGATGTTCGT 58.937 43.478 0.00 0.00 32.83 3.85
412 413 4.151867 GGTTAGGACACTTTGATGTTCGTC 59.848 45.833 0.00 0.00 32.83 4.20
413 414 2.767505 AGGACACTTTGATGTTCGTCC 58.232 47.619 0.00 0.00 42.64 4.79
414 415 1.804748 GGACACTTTGATGTTCGTCCC 59.195 52.381 0.00 0.00 37.54 4.46
415 416 2.550208 GGACACTTTGATGTTCGTCCCT 60.550 50.000 0.00 0.00 37.54 4.20
416 417 2.480419 GACACTTTGATGTTCGTCCCTG 59.520 50.000 0.00 0.00 31.24 4.45
417 418 2.158813 ACACTTTGATGTTCGTCCCTGT 60.159 45.455 0.00 0.00 0.00 4.00
418 419 3.070446 ACACTTTGATGTTCGTCCCTGTA 59.930 43.478 0.00 0.00 0.00 2.74
419 420 4.062293 CACTTTGATGTTCGTCCCTGTAA 58.938 43.478 0.00 0.00 0.00 2.41
420 421 4.513692 CACTTTGATGTTCGTCCCTGTAAA 59.486 41.667 0.00 0.00 0.00 2.01
421 422 4.514066 ACTTTGATGTTCGTCCCTGTAAAC 59.486 41.667 0.00 0.00 0.00 2.01
422 423 3.755112 TGATGTTCGTCCCTGTAAACA 57.245 42.857 0.00 0.00 36.19 2.83
423 424 4.280436 TGATGTTCGTCCCTGTAAACAT 57.720 40.909 0.00 0.00 43.15 2.71
424 425 4.647611 TGATGTTCGTCCCTGTAAACATT 58.352 39.130 0.00 0.00 41.18 2.71
425 426 4.454161 TGATGTTCGTCCCTGTAAACATTG 59.546 41.667 0.00 0.00 41.18 2.82
426 427 3.811083 TGTTCGTCCCTGTAAACATTGT 58.189 40.909 0.00 0.00 0.00 2.71
427 428 3.562141 TGTTCGTCCCTGTAAACATTGTG 59.438 43.478 0.00 0.00 0.00 3.33
428 429 3.755112 TCGTCCCTGTAAACATTGTGA 57.245 42.857 0.00 0.00 0.00 3.58
429 430 3.395639 TCGTCCCTGTAAACATTGTGAC 58.604 45.455 0.00 0.00 0.00 3.67
430 431 3.135225 CGTCCCTGTAAACATTGTGACA 58.865 45.455 5.08 5.08 0.00 3.58
431 432 3.751175 CGTCCCTGTAAACATTGTGACAT 59.249 43.478 5.52 0.00 0.00 3.06
432 433 4.215399 CGTCCCTGTAAACATTGTGACATT 59.785 41.667 5.52 0.00 0.00 2.71
433 434 5.410132 CGTCCCTGTAAACATTGTGACATTA 59.590 40.000 5.52 0.00 0.00 1.90
434 435 6.093495 CGTCCCTGTAAACATTGTGACATTAT 59.907 38.462 5.52 0.00 0.00 1.28
435 436 7.279090 CGTCCCTGTAAACATTGTGACATTATA 59.721 37.037 5.52 0.00 0.00 0.98
436 437 8.952278 GTCCCTGTAAACATTGTGACATTATAA 58.048 33.333 5.52 0.00 0.00 0.98
437 438 9.521841 TCCCTGTAAACATTGTGACATTATAAA 57.478 29.630 5.52 0.00 0.00 1.40
446 447 9.416794 ACATTGTGACATTATAAAAATTTCGCA 57.583 25.926 0.00 0.00 0.00 5.10
561 562 3.192633 GTGACCCAAGGTTTCGCATTTAT 59.807 43.478 0.00 0.00 35.25 1.40
562 563 4.396790 GTGACCCAAGGTTTCGCATTTATA 59.603 41.667 0.00 0.00 35.25 0.98
645 3842 0.695803 CTACCAGAGCCCCAATCCCT 60.696 60.000 0.00 0.00 0.00 4.20
805 4051 1.306654 TCCCTGCCGTATTCACCCT 60.307 57.895 0.00 0.00 0.00 4.34
1139 4385 0.402419 AGGGGCCATCATGAGATCCA 60.402 55.000 4.39 0.00 30.20 3.41
1282 4528 4.464008 AGAGGAAGAAATTCAGTTGCACA 58.536 39.130 0.00 0.00 0.00 4.57
1378 4624 1.990614 GCCGGAAAGGAGGAGGTCT 60.991 63.158 5.05 0.00 45.00 3.85
2029 5277 5.069318 TCTGGATTTGAAGTTGTACATGCA 58.931 37.500 0.00 0.00 0.00 3.96
2581 5829 0.529337 CAGAGATGCCGCTAGTGTGG 60.529 60.000 1.99 0.00 46.17 4.17
2600 5848 2.103941 TGGTACTGTTGCACATGAGACA 59.896 45.455 0.00 0.00 0.00 3.41
2867 6115 1.452108 GCTCCGCTAAATGGCCACT 60.452 57.895 8.16 0.00 0.00 4.00
2878 6126 3.958860 GGCCACTGGACCACTGCT 61.959 66.667 0.00 0.00 0.00 4.24
3552 7078 5.008811 CCAAAATGCATGTGTGGATGTTTTT 59.991 36.000 15.32 0.02 36.44 1.94
3635 7163 1.471501 CCTGTAGCTCGCTTACATGCA 60.472 52.381 0.00 0.00 0.00 3.96
3900 7440 2.631062 AGTCATCAGGTGGAACGTAACA 59.369 45.455 0.00 0.00 38.12 2.41
4062 7604 2.284995 GCACCTCACCTCTCCCCT 60.285 66.667 0.00 0.00 0.00 4.79
4144 7945 2.362369 CCCCTGTCGATCTGCCACT 61.362 63.158 0.00 0.00 0.00 4.00
4157 7960 3.006756 GCCACTAGCGCTGGACTCA 62.007 63.158 28.72 0.49 0.00 3.41
4221 8024 2.124736 GCGGGCAAGCAGGTATGA 60.125 61.111 0.00 0.00 37.05 2.15
4439 8249 1.204941 GCACAGGAGTAGATCAACGGT 59.795 52.381 0.00 0.00 0.00 4.83
4498 8311 1.488705 AAGTCCGGTGATGAAGGGCA 61.489 55.000 0.00 0.00 30.78 5.36
4502 8315 2.110967 CGGTGATGAAGGGCAGCAG 61.111 63.158 0.00 0.00 44.72 4.24
4509 8322 3.574074 GAAGGGCAGCAGCAGGGAA 62.574 63.158 2.65 0.00 44.61 3.97
4827 9231 6.712095 TGCATATATGAGAACTTCACCATTCC 59.288 38.462 17.10 0.00 38.99 3.01
4891 9295 3.054728 TCCTTCAACCAAACAGTGAGACA 60.055 43.478 0.00 0.00 0.00 3.41
4975 9379 6.720112 AATGGAATGGAACCATGACATTAG 57.280 37.500 22.63 0.00 45.89 1.73
5094 9498 2.418609 CGATCACCTCATGCCACTTGTA 60.419 50.000 0.00 0.00 0.00 2.41
5146 9550 8.861033 ATGCATGTGAAAATTCATGTGTATAC 57.139 30.769 0.00 0.00 42.09 1.47
5209 9613 8.417106 CCACTTCGCCACAAGAGATATATATAT 58.583 37.037 4.86 4.86 0.00 0.86
5233 9637 4.628333 ACATAATTGTCCGGTGTAACTTCG 59.372 41.667 0.00 0.00 36.74 3.79
5244 9648 5.287035 CCGGTGTAACTTCGTACTATCAAAC 59.713 44.000 0.00 0.00 36.74 2.93
5494 9898 3.266772 TCAGCCACCAAATCTATCCAGTT 59.733 43.478 0.00 0.00 0.00 3.16
5520 9924 6.106407 TCTATACCTCCCTTTCTTTCTCCT 57.894 41.667 0.00 0.00 0.00 3.69
5521 9925 5.900123 TCTATACCTCCCTTTCTTTCTCCTG 59.100 44.000 0.00 0.00 0.00 3.86
5730 10135 4.017499 AGTGGAAGCCCATTAACCTATTGT 60.017 41.667 0.00 0.00 45.68 2.71
5759 10164 9.672086 CATGTAAACTTTTCATTTTAACCTCGA 57.328 29.630 0.00 0.00 0.00 4.04
6254 13846 0.457035 CCATGGAAAGGCAACGGATG 59.543 55.000 5.56 0.00 46.39 3.51
6517 14109 0.763986 AGGGCAGCCATTTGGTTTGT 60.764 50.000 15.19 0.00 37.57 2.83
6660 14252 5.447624 AAAAAGTGCTAGGCGTTAATTGT 57.552 34.783 0.00 0.00 0.00 2.71
6661 14253 4.419522 AAAGTGCTAGGCGTTAATTGTG 57.580 40.909 0.00 0.00 0.00 3.33
6662 14254 1.737793 AGTGCTAGGCGTTAATTGTGC 59.262 47.619 0.00 0.00 0.00 4.57
6663 14255 0.724549 TGCTAGGCGTTAATTGTGCG 59.275 50.000 0.00 0.00 0.00 5.34
6664 14256 0.725117 GCTAGGCGTTAATTGTGCGT 59.275 50.000 0.00 0.00 0.00 5.24
6665 14257 1.267383 GCTAGGCGTTAATTGTGCGTC 60.267 52.381 0.00 0.00 0.00 5.19
6666 14258 2.268298 CTAGGCGTTAATTGTGCGTCT 58.732 47.619 9.45 9.45 43.25 4.18
6667 14259 1.519408 AGGCGTTAATTGTGCGTCTT 58.481 45.000 0.58 0.00 37.26 3.01
6668 14260 1.196808 AGGCGTTAATTGTGCGTCTTG 59.803 47.619 0.58 0.00 37.26 3.02
6669 14261 0.974836 GCGTTAATTGTGCGTCTTGC 59.025 50.000 0.00 0.00 46.70 4.01
6670 14262 1.602191 CGTTAATTGTGCGTCTTGCC 58.398 50.000 0.00 0.00 45.60 4.52
6671 14263 1.602191 GTTAATTGTGCGTCTTGCCG 58.398 50.000 0.00 0.00 45.60 5.69
6692 14284 3.319245 GCCTTGCGCTTTTCTGATC 57.681 52.632 9.73 0.00 0.00 2.92
6693 14285 0.523072 GCCTTGCGCTTTTCTGATCA 59.477 50.000 9.73 0.00 0.00 2.92
6694 14286 1.068333 GCCTTGCGCTTTTCTGATCAA 60.068 47.619 9.73 0.00 0.00 2.57
6695 14287 2.607771 GCCTTGCGCTTTTCTGATCAAA 60.608 45.455 9.73 0.00 0.00 2.69
6696 14288 3.240069 CCTTGCGCTTTTCTGATCAAAG 58.760 45.455 9.73 0.00 34.80 2.77
6700 14292 2.336554 GCTTTTCTGATCAAAGCGCA 57.663 45.000 11.47 0.00 44.94 6.09
6701 14293 2.872370 GCTTTTCTGATCAAAGCGCAT 58.128 42.857 11.47 0.00 44.94 4.73
6702 14294 2.597305 GCTTTTCTGATCAAAGCGCATG 59.403 45.455 11.47 8.75 44.94 4.06
6703 14295 2.267188 TTTCTGATCAAAGCGCATGC 57.733 45.000 11.47 7.91 43.24 4.06
6718 14310 2.322161 GCATGCTTATGCGCAATTAGG 58.678 47.619 17.11 4.76 44.06 2.69
6719 14311 2.322161 CATGCTTATGCGCAATTAGGC 58.678 47.619 17.11 16.30 44.06 3.93
6731 14323 4.053903 GCAATTAGGCGTAGATTAAGCG 57.946 45.455 0.00 0.00 33.84 4.68
6758 14350 2.739293 GCACTAGGCGTTTTGCTATC 57.261 50.000 0.00 0.00 45.43 2.08
6759 14351 1.004927 GCACTAGGCGTTTTGCTATCG 60.005 52.381 0.00 0.00 45.43 2.92
6765 14357 1.567504 GCGTTTTGCTATCGCCTAGA 58.432 50.000 0.00 0.00 43.41 2.43
6766 14358 1.523095 GCGTTTTGCTATCGCCTAGAG 59.477 52.381 0.00 0.00 43.41 2.43
6767 14359 1.523095 CGTTTTGCTATCGCCTAGAGC 59.477 52.381 0.00 0.00 43.02 4.09
6768 14360 1.867865 GTTTTGCTATCGCCTAGAGCC 59.132 52.381 0.00 0.00 41.98 4.70
6769 14361 1.414158 TTTGCTATCGCCTAGAGCCT 58.586 50.000 0.00 0.00 41.98 4.58
6770 14362 2.287977 TTGCTATCGCCTAGAGCCTA 57.712 50.000 0.00 0.00 41.98 3.93
6771 14363 1.827681 TGCTATCGCCTAGAGCCTAG 58.172 55.000 0.00 3.06 41.98 3.02
6772 14364 1.099689 GCTATCGCCTAGAGCCTAGG 58.900 60.000 18.85 18.85 36.38 3.02
6783 14375 3.410958 GCCTAGGCGCACTTAAGC 58.589 61.111 20.16 0.00 0.00 3.09
6879 14471 6.018588 CAGTGACAAACAACGTGGTAGAAATA 60.019 38.462 0.00 0.00 0.00 1.40
7052 14644 3.386078 CCAGCAAGGCTACTAGAGAATCA 59.614 47.826 0.00 0.00 36.40 2.57
7099 14691 0.036388 CCGCATTACCACTGTCCACT 60.036 55.000 0.00 0.00 0.00 4.00
7108 14700 1.688197 CCACTGTCCACTGCCAAAATT 59.312 47.619 0.00 0.00 0.00 1.82
7154 14747 3.795826 GCACGAGTACTGTGTCTTGTTCT 60.796 47.826 19.72 0.00 39.53 3.01
7155 14748 3.731216 CACGAGTACTGTGTCTTGTTCTG 59.269 47.826 0.00 0.00 32.68 3.02
7156 14749 3.380637 ACGAGTACTGTGTCTTGTTCTGT 59.619 43.478 0.00 0.00 0.00 3.41
7344 14937 0.742990 CGGCGGTGGTGTTGATGTAT 60.743 55.000 0.00 0.00 0.00 2.29
7525 15122 2.093128 CGATGGTGGGCTAAAACCTACT 60.093 50.000 0.00 0.00 40.81 2.57
7563 15160 2.255770 ACTTTTCCCGGGAGAGAGAT 57.744 50.000 31.56 14.53 0.00 2.75
7565 15162 2.111384 CTTTTCCCGGGAGAGAGATGA 58.889 52.381 25.26 2.54 0.00 2.92
7638 15243 0.611618 ATGGATTGCGGCAGTTTCCA 60.612 50.000 24.28 24.28 40.54 3.53
7641 15246 1.469767 GGATTGCGGCAGTTTCCATTC 60.470 52.381 18.26 0.00 0.00 2.67
7650 15255 2.684038 GCAGTTTCCATTCCCCCTAGTC 60.684 54.545 0.00 0.00 0.00 2.59
7696 15301 3.252458 GGGTTTTCTTGCTCGTATTGTGT 59.748 43.478 0.00 0.00 0.00 3.72
7763 15368 2.514160 GGAGGGGAGGTTGAACCATTAT 59.486 50.000 17.83 0.00 41.95 1.28
7773 15378 4.518970 GGTTGAACCATTATGACGGCATAT 59.481 41.667 12.78 0.00 38.42 1.78
8073 15678 0.256752 CACATGGGATGAAGCTGGGA 59.743 55.000 0.00 0.00 0.00 4.37
8295 15900 2.159142 CCGTTTCCAGTACCGCTAAGAT 60.159 50.000 0.00 0.00 0.00 2.40
8509 16114 4.022849 GGCTCCAGATTTATGCATGTTACC 60.023 45.833 10.16 0.00 0.00 2.85
8634 16244 6.385033 AGAGCAAGTGTTCTGAATTTAATGC 58.615 36.000 0.00 2.18 34.25 3.56
9045 16656 6.551736 GCGGTTACACAATGAATTAATGAGT 58.448 36.000 0.00 0.00 0.00 3.41
9105 16716 5.250200 TGTGTGTAAAGTTCACTCTTGGTT 58.750 37.500 0.00 0.00 36.83 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 5.778161 TCTATGTACGTTTGCAACTGATG 57.222 39.130 0.00 0.00 0.00 3.07
9 10 6.163476 TCTTCTATGTACGTTTGCAACTGAT 58.837 36.000 0.00 0.00 0.00 2.90
10 11 5.534407 TCTTCTATGTACGTTTGCAACTGA 58.466 37.500 0.00 0.00 0.00 3.41
11 12 5.163953 CCTCTTCTATGTACGTTTGCAACTG 60.164 44.000 0.00 0.00 0.00 3.16
12 13 4.929808 CCTCTTCTATGTACGTTTGCAACT 59.070 41.667 0.00 0.00 0.00 3.16
13 14 4.927425 TCCTCTTCTATGTACGTTTGCAAC 59.073 41.667 0.00 0.00 0.00 4.17
14 15 5.142061 TCCTCTTCTATGTACGTTTGCAA 57.858 39.130 0.00 0.00 0.00 4.08
15 16 4.744570 CTCCTCTTCTATGTACGTTTGCA 58.255 43.478 0.00 0.00 0.00 4.08
16 17 3.552294 GCTCCTCTTCTATGTACGTTTGC 59.448 47.826 0.00 0.00 0.00 3.68
17 18 4.800993 CAGCTCCTCTTCTATGTACGTTTG 59.199 45.833 0.00 0.00 0.00 2.93
18 19 4.463186 ACAGCTCCTCTTCTATGTACGTTT 59.537 41.667 0.00 0.00 0.00 3.60
19 20 4.017808 ACAGCTCCTCTTCTATGTACGTT 58.982 43.478 0.00 0.00 0.00 3.99
20 21 3.622630 ACAGCTCCTCTTCTATGTACGT 58.377 45.455 0.00 0.00 0.00 3.57
21 22 4.355437 CAACAGCTCCTCTTCTATGTACG 58.645 47.826 0.00 0.00 0.00 3.67
22 23 4.116238 GCAACAGCTCCTCTTCTATGTAC 58.884 47.826 0.00 0.00 0.00 2.90
23 24 4.026744 AGCAACAGCTCCTCTTCTATGTA 58.973 43.478 0.00 0.00 31.68 2.29
24 25 2.836981 AGCAACAGCTCCTCTTCTATGT 59.163 45.455 0.00 0.00 31.68 2.29
25 26 3.196463 CAGCAACAGCTCCTCTTCTATG 58.804 50.000 0.00 0.00 36.19 2.23
26 27 2.419851 GCAGCAACAGCTCCTCTTCTAT 60.420 50.000 0.00 0.00 36.19 1.98
27 28 1.066573 GCAGCAACAGCTCCTCTTCTA 60.067 52.381 0.00 0.00 36.19 2.10
28 29 0.321475 GCAGCAACAGCTCCTCTTCT 60.321 55.000 0.00 0.00 36.19 2.85
29 30 0.604780 TGCAGCAACAGCTCCTCTTC 60.605 55.000 0.00 0.00 36.19 2.87
30 31 0.605860 CTGCAGCAACAGCTCCTCTT 60.606 55.000 0.00 0.00 36.19 2.85
31 32 1.003597 CTGCAGCAACAGCTCCTCT 60.004 57.895 0.00 0.00 36.19 3.69
32 33 0.036952 TACTGCAGCAACAGCTCCTC 60.037 55.000 15.27 0.00 41.60 3.71
33 34 0.617413 ATACTGCAGCAACAGCTCCT 59.383 50.000 15.27 0.00 41.60 3.69
34 35 0.731417 CATACTGCAGCAACAGCTCC 59.269 55.000 15.27 0.00 41.60 4.70
35 36 0.098376 GCATACTGCAGCAACAGCTC 59.902 55.000 15.27 0.00 44.26 4.09
36 37 2.177950 GCATACTGCAGCAACAGCT 58.822 52.632 15.27 0.00 44.26 4.24
37 38 4.779819 GCATACTGCAGCAACAGC 57.220 55.556 15.27 7.55 44.26 4.40
53 54 0.718343 GTTGTCGTCATGCTCTCTGC 59.282 55.000 0.00 0.00 43.25 4.26
54 55 2.360553 AGTTGTCGTCATGCTCTCTG 57.639 50.000 0.00 0.00 0.00 3.35
55 56 3.006323 AGAAAGTTGTCGTCATGCTCTCT 59.994 43.478 0.00 0.00 0.00 3.10
56 57 3.321497 AGAAAGTTGTCGTCATGCTCTC 58.679 45.455 0.00 0.00 0.00 3.20
57 58 3.393089 AGAAAGTTGTCGTCATGCTCT 57.607 42.857 0.00 0.00 0.00 4.09
58 59 3.364366 CCAAGAAAGTTGTCGTCATGCTC 60.364 47.826 0.00 0.00 0.00 4.26
59 60 2.549754 CCAAGAAAGTTGTCGTCATGCT 59.450 45.455 0.00 0.00 0.00 3.79
60 61 2.548057 TCCAAGAAAGTTGTCGTCATGC 59.452 45.455 0.00 0.00 0.00 4.06
61 62 3.364366 GCTCCAAGAAAGTTGTCGTCATG 60.364 47.826 0.00 0.00 0.00 3.07
62 63 2.808543 GCTCCAAGAAAGTTGTCGTCAT 59.191 45.455 0.00 0.00 0.00 3.06
63 64 2.158957 AGCTCCAAGAAAGTTGTCGTCA 60.159 45.455 0.00 0.00 0.00 4.35
64 65 2.484889 AGCTCCAAGAAAGTTGTCGTC 58.515 47.619 0.00 0.00 0.00 4.20
65 66 2.622064 AGCTCCAAGAAAGTTGTCGT 57.378 45.000 0.00 0.00 0.00 4.34
66 67 2.872245 TGAAGCTCCAAGAAAGTTGTCG 59.128 45.455 0.00 0.00 0.00 4.35
67 68 3.879892 ACTGAAGCTCCAAGAAAGTTGTC 59.120 43.478 0.00 0.00 0.00 3.18
68 69 3.629398 CACTGAAGCTCCAAGAAAGTTGT 59.371 43.478 0.00 0.00 0.00 3.32
69 70 3.879295 TCACTGAAGCTCCAAGAAAGTTG 59.121 43.478 0.00 0.00 0.00 3.16
70 71 4.156455 TCACTGAAGCTCCAAGAAAGTT 57.844 40.909 0.00 0.00 0.00 2.66
71 72 3.845781 TCACTGAAGCTCCAAGAAAGT 57.154 42.857 0.00 0.00 0.00 2.66
72 73 4.321718 TGATCACTGAAGCTCCAAGAAAG 58.678 43.478 0.00 0.00 0.00 2.62
73 74 4.356405 TGATCACTGAAGCTCCAAGAAA 57.644 40.909 0.00 0.00 0.00 2.52
74 75 4.564782 ATGATCACTGAAGCTCCAAGAA 57.435 40.909 0.00 0.00 0.00 2.52
75 76 4.564782 AATGATCACTGAAGCTCCAAGA 57.435 40.909 0.00 0.00 0.00 3.02
76 77 6.939132 AATAATGATCACTGAAGCTCCAAG 57.061 37.500 0.00 0.00 0.00 3.61
77 78 7.795047 TCTAATAATGATCACTGAAGCTCCAA 58.205 34.615 0.00 0.00 0.00 3.53
78 79 7.365497 TCTAATAATGATCACTGAAGCTCCA 57.635 36.000 0.00 0.00 0.00 3.86
79 80 6.873076 CCTCTAATAATGATCACTGAAGCTCC 59.127 42.308 0.00 0.00 0.00 4.70
80 81 7.441017 ACCTCTAATAATGATCACTGAAGCTC 58.559 38.462 0.00 0.00 0.00 4.09
81 82 7.372260 ACCTCTAATAATGATCACTGAAGCT 57.628 36.000 0.00 0.00 0.00 3.74
86 87 9.574458 CGGTTATACCTCTAATAATGATCACTG 57.426 37.037 0.00 0.00 35.66 3.66
87 88 9.529823 TCGGTTATACCTCTAATAATGATCACT 57.470 33.333 0.00 0.00 35.66 3.41
90 91 9.968870 GGATCGGTTATACCTCTAATAATGATC 57.031 37.037 0.00 0.00 35.66 2.92
91 92 8.630917 CGGATCGGTTATACCTCTAATAATGAT 58.369 37.037 0.00 0.00 35.66 2.45
92 93 7.830697 TCGGATCGGTTATACCTCTAATAATGA 59.169 37.037 0.00 0.00 35.66 2.57
93 94 7.914346 GTCGGATCGGTTATACCTCTAATAATG 59.086 40.741 0.00 0.00 35.66 1.90
94 95 7.613022 TGTCGGATCGGTTATACCTCTAATAAT 59.387 37.037 0.00 0.00 35.66 1.28
95 96 6.942005 TGTCGGATCGGTTATACCTCTAATAA 59.058 38.462 0.00 0.00 35.66 1.40
96 97 6.475504 TGTCGGATCGGTTATACCTCTAATA 58.524 40.000 0.00 0.00 35.66 0.98
97 98 5.319453 TGTCGGATCGGTTATACCTCTAAT 58.681 41.667 0.00 0.00 35.66 1.73
98 99 4.717877 TGTCGGATCGGTTATACCTCTAA 58.282 43.478 0.00 0.00 35.66 2.10
99 100 4.356405 TGTCGGATCGGTTATACCTCTA 57.644 45.455 0.00 0.00 35.66 2.43
100 101 3.219176 TGTCGGATCGGTTATACCTCT 57.781 47.619 0.00 0.00 35.66 3.69
101 102 3.067180 TGTTGTCGGATCGGTTATACCTC 59.933 47.826 0.00 0.00 35.66 3.85
102 103 3.025978 TGTTGTCGGATCGGTTATACCT 58.974 45.455 0.00 0.00 35.66 3.08
103 104 3.118542 GTGTTGTCGGATCGGTTATACC 58.881 50.000 0.00 0.00 34.05 2.73
104 105 3.795101 CAGTGTTGTCGGATCGGTTATAC 59.205 47.826 0.00 0.00 0.00 1.47
105 106 3.181484 CCAGTGTTGTCGGATCGGTTATA 60.181 47.826 0.00 0.00 0.00 0.98
106 107 2.418197 CCAGTGTTGTCGGATCGGTTAT 60.418 50.000 0.00 0.00 0.00 1.89
107 108 1.067425 CCAGTGTTGTCGGATCGGTTA 60.067 52.381 0.00 0.00 0.00 2.85
108 109 0.320421 CCAGTGTTGTCGGATCGGTT 60.320 55.000 0.00 0.00 0.00 4.44
109 110 1.183030 TCCAGTGTTGTCGGATCGGT 61.183 55.000 0.00 0.00 0.00 4.69
110 111 0.458543 CTCCAGTGTTGTCGGATCGG 60.459 60.000 0.00 0.00 0.00 4.18
111 112 0.458543 CCTCCAGTGTTGTCGGATCG 60.459 60.000 0.00 0.00 0.00 3.69
112 113 0.741221 GCCTCCAGTGTTGTCGGATC 60.741 60.000 0.00 0.00 0.00 3.36
113 114 1.194781 AGCCTCCAGTGTTGTCGGAT 61.195 55.000 0.00 0.00 0.00 4.18
114 115 1.816863 GAGCCTCCAGTGTTGTCGGA 61.817 60.000 0.00 0.00 0.00 4.55
115 116 1.374758 GAGCCTCCAGTGTTGTCGG 60.375 63.158 0.00 0.00 0.00 4.79
116 117 0.034059 AAGAGCCTCCAGTGTTGTCG 59.966 55.000 0.00 0.00 0.00 4.35
117 118 1.517242 CAAGAGCCTCCAGTGTTGTC 58.483 55.000 0.00 0.00 0.00 3.18
118 119 0.536006 GCAAGAGCCTCCAGTGTTGT 60.536 55.000 0.00 0.00 33.58 3.32
119 120 0.250640 AGCAAGAGCCTCCAGTGTTG 60.251 55.000 0.00 0.00 43.56 3.33
120 121 0.250640 CAGCAAGAGCCTCCAGTGTT 60.251 55.000 0.00 0.00 43.56 3.32
121 122 1.374190 CAGCAAGAGCCTCCAGTGT 59.626 57.895 0.00 0.00 43.56 3.55
122 123 0.673022 GACAGCAAGAGCCTCCAGTG 60.673 60.000 0.00 0.00 43.56 3.66
123 124 1.676384 GACAGCAAGAGCCTCCAGT 59.324 57.895 0.00 0.00 43.56 4.00
124 125 1.078567 GGACAGCAAGAGCCTCCAG 60.079 63.158 0.00 0.00 43.56 3.86
125 126 2.947532 CGGACAGCAAGAGCCTCCA 61.948 63.158 0.00 0.00 43.56 3.86
126 127 2.125350 CGGACAGCAAGAGCCTCC 60.125 66.667 0.00 0.00 43.56 4.30
127 128 2.125350 CCGGACAGCAAGAGCCTC 60.125 66.667 0.00 0.00 43.56 4.70
128 129 3.710722 CCCGGACAGCAAGAGCCT 61.711 66.667 0.73 0.00 43.56 4.58
129 130 3.672295 CTCCCGGACAGCAAGAGCC 62.672 68.421 0.73 0.00 43.56 4.70
130 131 2.125350 CTCCCGGACAGCAAGAGC 60.125 66.667 0.73 0.00 42.56 4.09
131 132 0.970937 TACCTCCCGGACAGCAAGAG 60.971 60.000 0.73 0.00 0.00 2.85
132 133 1.077805 TACCTCCCGGACAGCAAGA 59.922 57.895 0.73 0.00 0.00 3.02
133 134 1.218316 GTACCTCCCGGACAGCAAG 59.782 63.158 0.73 0.00 0.00 4.01
134 135 0.040058 TAGTACCTCCCGGACAGCAA 59.960 55.000 0.73 0.00 0.00 3.91
135 136 0.395311 CTAGTACCTCCCGGACAGCA 60.395 60.000 0.73 0.00 0.00 4.41
136 137 1.736365 GCTAGTACCTCCCGGACAGC 61.736 65.000 0.73 1.01 0.00 4.40
137 138 1.108132 GGCTAGTACCTCCCGGACAG 61.108 65.000 0.73 0.00 0.00 3.51
138 139 1.076485 GGCTAGTACCTCCCGGACA 60.076 63.158 0.73 0.00 0.00 4.02
139 140 1.831726 GGGCTAGTACCTCCCGGAC 60.832 68.421 0.73 0.00 0.00 4.79
140 141 2.011044 AGGGCTAGTACCTCCCGGA 61.011 63.158 0.73 0.00 44.70 5.14
141 142 2.607602 AGGGCTAGTACCTCCCGG 59.392 66.667 0.00 0.00 44.70 5.73
146 147 2.518825 CGGCGAGGGCTAGTACCT 60.519 66.667 0.00 7.72 42.18 3.08
147 148 2.517875 TCGGCGAGGGCTAGTACC 60.518 66.667 4.99 0.00 39.81 3.34
148 149 2.553727 CCTCGGCGAGGGCTAGTAC 61.554 68.421 41.24 0.00 45.43 2.73
149 150 2.203308 CCTCGGCGAGGGCTAGTA 60.203 66.667 41.24 3.27 45.43 1.82
157 158 0.391130 TGGTTCAAATCCTCGGCGAG 60.391 55.000 29.16 29.16 0.00 5.03
158 159 0.035598 TTGGTTCAAATCCTCGGCGA 59.964 50.000 10.14 10.14 0.00 5.54
159 160 0.168128 GTTGGTTCAAATCCTCGGCG 59.832 55.000 0.00 0.00 0.00 6.46
160 161 0.168128 CGTTGGTTCAAATCCTCGGC 59.832 55.000 0.00 0.00 0.00 5.54
161 162 0.802494 CCGTTGGTTCAAATCCTCGG 59.198 55.000 0.00 0.00 37.08 4.63
162 163 1.732259 CTCCGTTGGTTCAAATCCTCG 59.268 52.381 0.00 0.00 0.00 4.63
163 164 3.053831 TCTCCGTTGGTTCAAATCCTC 57.946 47.619 0.00 0.00 0.00 3.71
164 165 3.502123 TTCTCCGTTGGTTCAAATCCT 57.498 42.857 0.00 0.00 0.00 3.24
165 166 4.217550 TGAATTCTCCGTTGGTTCAAATCC 59.782 41.667 7.05 0.00 0.00 3.01
166 167 5.154222 GTGAATTCTCCGTTGGTTCAAATC 58.846 41.667 7.05 0.00 31.38 2.17
167 168 4.320202 CGTGAATTCTCCGTTGGTTCAAAT 60.320 41.667 7.05 0.00 31.38 2.32
168 169 3.002862 CGTGAATTCTCCGTTGGTTCAAA 59.997 43.478 7.05 0.00 31.38 2.69
169 170 2.546368 CGTGAATTCTCCGTTGGTTCAA 59.454 45.455 7.05 0.00 31.38 2.69
170 171 2.139917 CGTGAATTCTCCGTTGGTTCA 58.860 47.619 7.05 0.00 0.00 3.18
171 172 2.140717 ACGTGAATTCTCCGTTGGTTC 58.859 47.619 15.06 0.00 0.00 3.62
172 173 2.249844 ACGTGAATTCTCCGTTGGTT 57.750 45.000 15.06 0.00 0.00 3.67
173 174 2.249844 AACGTGAATTCTCCGTTGGT 57.750 45.000 25.22 10.28 42.59 3.67
176 177 1.588674 TGCAACGTGAATTCTCCGTT 58.411 45.000 22.31 22.31 44.81 4.44
177 178 1.732259 GATGCAACGTGAATTCTCCGT 59.268 47.619 15.06 15.06 36.17 4.69
178 179 1.062587 GGATGCAACGTGAATTCTCCG 59.937 52.381 7.05 11.22 0.00 4.63
179 180 1.062587 CGGATGCAACGTGAATTCTCC 59.937 52.381 7.05 1.70 0.00 3.71
180 181 1.999735 TCGGATGCAACGTGAATTCTC 59.000 47.619 12.89 1.90 0.00 2.87
181 182 2.093306 TCGGATGCAACGTGAATTCT 57.907 45.000 12.89 0.00 0.00 2.40
182 183 3.100817 CAATCGGATGCAACGTGAATTC 58.899 45.455 12.89 0.00 0.00 2.17
183 184 2.731968 GCAATCGGATGCAACGTGAATT 60.732 45.455 12.89 4.46 45.70 2.17
184 185 1.202177 GCAATCGGATGCAACGTGAAT 60.202 47.619 12.89 0.00 45.70 2.57
185 186 0.167908 GCAATCGGATGCAACGTGAA 59.832 50.000 12.89 0.00 45.70 3.18
186 187 1.793581 GCAATCGGATGCAACGTGA 59.206 52.632 12.89 2.44 45.70 4.35
187 188 4.365287 GCAATCGGATGCAACGTG 57.635 55.556 12.89 7.11 45.70 4.49
193 194 1.315257 ACCACCTTGCAATCGGATGC 61.315 55.000 11.47 6.42 46.58 3.91
194 195 0.452987 CACCACCTTGCAATCGGATG 59.547 55.000 11.47 6.15 0.00 3.51
195 196 0.680921 CCACCACCTTGCAATCGGAT 60.681 55.000 11.47 0.00 0.00 4.18
196 197 1.303236 CCACCACCTTGCAATCGGA 60.303 57.895 11.47 0.00 0.00 4.55
197 198 1.603455 ACCACCACCTTGCAATCGG 60.603 57.895 0.00 0.44 0.00 4.18
198 199 1.580942 CACCACCACCTTGCAATCG 59.419 57.895 0.00 0.00 0.00 3.34
199 200 0.539438 TCCACCACCACCTTGCAATC 60.539 55.000 0.00 0.00 0.00 2.67
200 201 0.827507 GTCCACCACCACCTTGCAAT 60.828 55.000 0.00 0.00 0.00 3.56
201 202 1.454847 GTCCACCACCACCTTGCAA 60.455 57.895 0.00 0.00 0.00 4.08
202 203 2.194597 GTCCACCACCACCTTGCA 59.805 61.111 0.00 0.00 0.00 4.08
203 204 2.748058 ATCGTCCACCACCACCTTGC 62.748 60.000 0.00 0.00 0.00 4.01
204 205 0.611200 TATCGTCCACCACCACCTTG 59.389 55.000 0.00 0.00 0.00 3.61
205 206 1.485066 GATATCGTCCACCACCACCTT 59.515 52.381 0.00 0.00 0.00 3.50
206 207 1.120530 GATATCGTCCACCACCACCT 58.879 55.000 0.00 0.00 0.00 4.00
207 208 0.828022 TGATATCGTCCACCACCACC 59.172 55.000 0.00 0.00 0.00 4.61
208 209 2.483876 CATGATATCGTCCACCACCAC 58.516 52.381 0.00 0.00 0.00 4.16
209 210 1.202639 GCATGATATCGTCCACCACCA 60.203 52.381 0.00 0.00 0.00 4.17
210 211 1.202639 TGCATGATATCGTCCACCACC 60.203 52.381 0.00 0.00 0.00 4.61
211 212 1.867233 GTGCATGATATCGTCCACCAC 59.133 52.381 7.66 3.95 0.00 4.16
212 213 1.202639 GGTGCATGATATCGTCCACCA 60.203 52.381 26.77 6.59 41.68 4.17
213 214 1.512926 GGTGCATGATATCGTCCACC 58.487 55.000 19.92 19.92 36.36 4.61
214 215 1.139989 CGGTGCATGATATCGTCCAC 58.860 55.000 10.11 10.11 0.00 4.02
215 216 0.033366 CCGGTGCATGATATCGTCCA 59.967 55.000 0.00 0.00 0.00 4.02
216 217 0.317160 TCCGGTGCATGATATCGTCC 59.683 55.000 0.00 0.00 0.00 4.79
217 218 1.000163 ACTCCGGTGCATGATATCGTC 60.000 52.381 0.00 0.00 0.00 4.20
218 219 1.000163 GACTCCGGTGCATGATATCGT 60.000 52.381 0.00 0.00 0.00 3.73
219 220 1.270826 AGACTCCGGTGCATGATATCG 59.729 52.381 0.00 0.00 0.00 2.92
220 221 2.611473 CCAGACTCCGGTGCATGATATC 60.611 54.545 0.00 0.00 0.00 1.63
221 222 1.345741 CCAGACTCCGGTGCATGATAT 59.654 52.381 0.00 0.00 0.00 1.63
222 223 0.752658 CCAGACTCCGGTGCATGATA 59.247 55.000 0.00 0.00 0.00 2.15
223 224 1.524002 CCAGACTCCGGTGCATGAT 59.476 57.895 0.00 0.00 0.00 2.45
224 225 2.981302 CCAGACTCCGGTGCATGA 59.019 61.111 0.00 0.00 0.00 3.07
225 226 2.821366 GCCAGACTCCGGTGCATG 60.821 66.667 0.00 1.11 0.00 4.06
226 227 4.101448 GGCCAGACTCCGGTGCAT 62.101 66.667 0.00 0.00 0.00 3.96
228 229 4.767255 CTGGCCAGACTCCGGTGC 62.767 72.222 29.88 0.00 0.00 5.01
229 230 4.767255 GCTGGCCAGACTCCGGTG 62.767 72.222 37.21 7.81 32.54 4.94
230 231 2.880629 ATAGCTGGCCAGACTCCGGT 62.881 60.000 37.21 17.04 32.54 5.28
231 232 2.136878 ATAGCTGGCCAGACTCCGG 61.137 63.158 37.21 9.51 0.00 5.14
232 233 1.068753 CATAGCTGGCCAGACTCCG 59.931 63.158 37.21 20.41 0.00 4.63
233 234 1.050988 TCCATAGCTGGCCAGACTCC 61.051 60.000 37.21 18.41 42.80 3.85
234 235 0.392336 CTCCATAGCTGGCCAGACTC 59.608 60.000 37.21 18.81 42.80 3.36
235 236 0.326048 ACTCCATAGCTGGCCAGACT 60.326 55.000 37.21 30.58 42.80 3.24
236 237 0.105778 GACTCCATAGCTGGCCAGAC 59.894 60.000 37.21 25.74 42.80 3.51
237 238 0.325577 TGACTCCATAGCTGGCCAGA 60.326 55.000 37.21 17.52 42.80 3.86
238 239 0.763652 ATGACTCCATAGCTGGCCAG 59.236 55.000 29.34 29.34 42.80 4.85
239 240 0.761187 GATGACTCCATAGCTGGCCA 59.239 55.000 4.71 4.71 42.80 5.36
240 241 0.761187 TGATGACTCCATAGCTGGCC 59.239 55.000 0.00 0.00 42.80 5.36
241 242 2.855209 ATGATGACTCCATAGCTGGC 57.145 50.000 0.00 0.00 42.80 4.85
242 243 4.879197 TGTATGATGACTCCATAGCTGG 57.121 45.455 0.00 0.00 44.64 4.85
243 244 6.034161 TCATGTATGATGACTCCATAGCTG 57.966 41.667 0.00 0.00 32.09 4.24
244 245 6.676990 TTCATGTATGATGACTCCATAGCT 57.323 37.500 0.00 0.00 36.56 3.32
245 246 7.918536 AATTCATGTATGATGACTCCATAGC 57.081 36.000 0.00 0.00 36.56 2.97
249 250 9.440773 GCTATAAATTCATGTATGATGACTCCA 57.559 33.333 0.00 0.00 36.56 3.86
250 251 8.887717 GGCTATAAATTCATGTATGATGACTCC 58.112 37.037 0.00 0.00 36.56 3.85
251 252 9.664332 AGGCTATAAATTCATGTATGATGACTC 57.336 33.333 0.00 0.00 36.56 3.36
290 291 9.295825 ACTCATGGACAAAGTTACATAAAATGA 57.704 29.630 0.00 0.00 0.00 2.57
291 292 9.912634 AACTCATGGACAAAGTTACATAAAATG 57.087 29.630 0.00 0.00 31.68 2.32
295 296 9.226606 CCTAAACTCATGGACAAAGTTACATAA 57.773 33.333 0.00 0.00 33.08 1.90
296 297 8.598916 TCCTAAACTCATGGACAAAGTTACATA 58.401 33.333 0.00 0.00 33.08 2.29
297 298 7.458397 TCCTAAACTCATGGACAAAGTTACAT 58.542 34.615 0.00 0.00 33.08 2.29
298 299 6.833041 TCCTAAACTCATGGACAAAGTTACA 58.167 36.000 0.00 0.00 33.08 2.41
299 300 6.935208 ACTCCTAAACTCATGGACAAAGTTAC 59.065 38.462 0.00 0.00 33.08 2.50
300 301 7.074653 ACTCCTAAACTCATGGACAAAGTTA 57.925 36.000 0.00 0.00 33.08 2.24
301 302 5.941788 ACTCCTAAACTCATGGACAAAGTT 58.058 37.500 0.00 0.00 34.81 2.66
302 303 5.568620 ACTCCTAAACTCATGGACAAAGT 57.431 39.130 0.00 0.00 0.00 2.66
303 304 5.412904 GGAACTCCTAAACTCATGGACAAAG 59.587 44.000 0.00 0.00 0.00 2.77
304 305 5.163141 TGGAACTCCTAAACTCATGGACAAA 60.163 40.000 0.00 0.00 36.82 2.83
305 306 4.349636 TGGAACTCCTAAACTCATGGACAA 59.650 41.667 0.00 0.00 36.82 3.18
306 307 3.907474 TGGAACTCCTAAACTCATGGACA 59.093 43.478 0.00 0.00 36.82 4.02
307 308 4.553330 TGGAACTCCTAAACTCATGGAC 57.447 45.455 0.00 0.00 36.82 4.02
308 309 4.597507 AGTTGGAACTCCTAAACTCATGGA 59.402 41.667 0.00 0.00 32.86 3.41
309 310 4.911390 AGTTGGAACTCCTAAACTCATGG 58.089 43.478 0.00 0.00 32.86 3.66
310 311 6.884280 AAAGTTGGAACTCCTAAACTCATG 57.116 37.500 2.82 0.00 38.57 3.07
311 312 8.990163 TTTAAAGTTGGAACTCCTAAACTCAT 57.010 30.769 2.82 0.00 38.57 2.90
312 313 8.680001 GTTTTAAAGTTGGAACTCCTAAACTCA 58.320 33.333 2.82 0.00 38.57 3.41
313 314 8.900781 AGTTTTAAAGTTGGAACTCCTAAACTC 58.099 33.333 14.09 8.51 37.65 3.01
314 315 8.818622 AGTTTTAAAGTTGGAACTCCTAAACT 57.181 30.769 14.09 14.09 38.57 2.66
315 316 8.680001 TGAGTTTTAAAGTTGGAACTCCTAAAC 58.320 33.333 17.00 11.52 44.50 2.01
316 317 8.680001 GTGAGTTTTAAAGTTGGAACTCCTAAA 58.320 33.333 17.00 0.00 44.50 1.85
317 318 7.830201 TGTGAGTTTTAAAGTTGGAACTCCTAA 59.170 33.333 17.00 6.35 44.50 2.69
318 319 7.340256 TGTGAGTTTTAAAGTTGGAACTCCTA 58.660 34.615 17.00 8.43 44.50 2.94
319 320 6.184789 TGTGAGTTTTAAAGTTGGAACTCCT 58.815 36.000 17.00 0.00 44.50 3.69
320 321 6.445357 TGTGAGTTTTAAAGTTGGAACTCC 57.555 37.500 17.00 11.82 44.50 3.85
321 322 8.926715 AATTGTGAGTTTTAAAGTTGGAACTC 57.073 30.769 14.59 14.59 45.04 3.01
324 325 9.308318 GCTAAATTGTGAGTTTTAAAGTTGGAA 57.692 29.630 0.00 0.00 0.00 3.53
325 326 7.646130 CGCTAAATTGTGAGTTTTAAAGTTGGA 59.354 33.333 0.00 0.00 0.00 3.53
326 327 7.646130 TCGCTAAATTGTGAGTTTTAAAGTTGG 59.354 33.333 0.00 0.00 0.00 3.77
327 328 8.555166 TCGCTAAATTGTGAGTTTTAAAGTTG 57.445 30.769 0.00 0.00 0.00 3.16
328 329 9.233232 CTTCGCTAAATTGTGAGTTTTAAAGTT 57.767 29.630 0.00 0.00 0.00 2.66
329 330 7.378728 GCTTCGCTAAATTGTGAGTTTTAAAGT 59.621 33.333 0.00 0.00 0.00 2.66
330 331 7.378461 TGCTTCGCTAAATTGTGAGTTTTAAAG 59.622 33.333 0.00 0.00 0.00 1.85
331 332 7.197017 TGCTTCGCTAAATTGTGAGTTTTAAA 58.803 30.769 0.00 0.00 0.00 1.52
332 333 6.730175 TGCTTCGCTAAATTGTGAGTTTTAA 58.270 32.000 0.00 0.00 0.00 1.52
333 334 6.307031 TGCTTCGCTAAATTGTGAGTTTTA 57.693 33.333 0.00 0.00 0.00 1.52
334 335 5.181690 TGCTTCGCTAAATTGTGAGTTTT 57.818 34.783 0.00 0.00 0.00 2.43
335 336 4.829064 TGCTTCGCTAAATTGTGAGTTT 57.171 36.364 0.00 0.00 0.00 2.66
336 337 4.726416 CATGCTTCGCTAAATTGTGAGTT 58.274 39.130 0.00 0.00 0.00 3.01
337 338 3.426695 GCATGCTTCGCTAAATTGTGAGT 60.427 43.478 11.37 0.00 0.00 3.41
338 339 3.103738 GCATGCTTCGCTAAATTGTGAG 58.896 45.455 11.37 0.00 0.00 3.51
339 340 2.749076 AGCATGCTTCGCTAAATTGTGA 59.251 40.909 16.30 0.00 38.15 3.58
340 341 3.141002 AGCATGCTTCGCTAAATTGTG 57.859 42.857 16.30 0.00 38.15 3.33
341 342 3.855689 AAGCATGCTTCGCTAAATTGT 57.144 38.095 27.21 0.08 39.29 2.71
342 343 4.168014 TCAAAGCATGCTTCGCTAAATTG 58.832 39.130 32.01 22.62 39.29 2.32
343 344 4.439305 TCAAAGCATGCTTCGCTAAATT 57.561 36.364 32.01 12.16 39.29 1.82
344 345 4.439305 TTCAAAGCATGCTTCGCTAAAT 57.561 36.364 32.01 12.93 39.29 1.40
345 346 3.913548 TTCAAAGCATGCTTCGCTAAA 57.086 38.095 32.01 18.12 39.29 1.85
346 347 3.913548 TTTCAAAGCATGCTTCGCTAA 57.086 38.095 32.01 19.73 39.29 3.09
347 348 4.439305 AATTTCAAAGCATGCTTCGCTA 57.561 36.364 32.01 18.31 39.29 4.26
348 349 3.308438 AATTTCAAAGCATGCTTCGCT 57.692 38.095 32.01 15.24 42.98 4.93
349 350 3.549070 CCTAATTTCAAAGCATGCTTCGC 59.451 43.478 32.01 0.00 34.84 4.70
350 351 4.107622 CCCTAATTTCAAAGCATGCTTCG 58.892 43.478 32.01 22.68 34.84 3.79
351 352 5.329035 TCCCTAATTTCAAAGCATGCTTC 57.671 39.130 32.01 0.00 34.84 3.86
352 353 5.395990 CCATCCCTAATTTCAAAGCATGCTT 60.396 40.000 27.21 27.21 37.98 3.91
353 354 4.100498 CCATCCCTAATTTCAAAGCATGCT 59.900 41.667 16.30 16.30 0.00 3.79
354 355 4.374399 CCATCCCTAATTTCAAAGCATGC 58.626 43.478 10.51 10.51 0.00 4.06
355 356 4.406649 ACCCATCCCTAATTTCAAAGCATG 59.593 41.667 0.00 0.00 0.00 4.06
356 357 4.623863 ACCCATCCCTAATTTCAAAGCAT 58.376 39.130 0.00 0.00 0.00 3.79
357 358 4.023291 GACCCATCCCTAATTTCAAAGCA 58.977 43.478 0.00 0.00 0.00 3.91
358 359 3.066760 CGACCCATCCCTAATTTCAAAGC 59.933 47.826 0.00 0.00 0.00 3.51
359 360 3.066760 GCGACCCATCCCTAATTTCAAAG 59.933 47.826 0.00 0.00 0.00 2.77
360 361 3.020984 GCGACCCATCCCTAATTTCAAA 58.979 45.455 0.00 0.00 0.00 2.69
361 362 2.650322 GCGACCCATCCCTAATTTCAA 58.350 47.619 0.00 0.00 0.00 2.69
362 363 1.133915 GGCGACCCATCCCTAATTTCA 60.134 52.381 0.00 0.00 0.00 2.69
363 364 1.133915 TGGCGACCCATCCCTAATTTC 60.134 52.381 0.00 0.00 35.79 2.17
364 365 0.923358 TGGCGACCCATCCCTAATTT 59.077 50.000 0.00 0.00 35.79 1.82
365 366 2.627771 TGGCGACCCATCCCTAATT 58.372 52.632 0.00 0.00 35.79 1.40
366 367 4.411164 TGGCGACCCATCCCTAAT 57.589 55.556 0.00 0.00 35.79 1.73
375 376 0.808755 CTAACCAAACATGGCGACCC 59.191 55.000 0.00 0.00 0.00 4.46
376 377 0.808755 CCTAACCAAACATGGCGACC 59.191 55.000 0.00 0.00 0.00 4.79
377 378 1.467342 GTCCTAACCAAACATGGCGAC 59.533 52.381 0.00 0.00 0.00 5.19
378 379 1.072489 TGTCCTAACCAAACATGGCGA 59.928 47.619 0.00 0.00 0.00 5.54
379 380 1.199097 GTGTCCTAACCAAACATGGCG 59.801 52.381 0.00 0.00 0.00 5.69
380 381 2.514803 AGTGTCCTAACCAAACATGGC 58.485 47.619 0.00 0.00 0.00 4.40
381 382 4.582656 TCAAAGTGTCCTAACCAAACATGG 59.417 41.667 0.00 0.00 0.00 3.66
382 383 5.766150 TCAAAGTGTCCTAACCAAACATG 57.234 39.130 0.00 0.00 0.00 3.21
383 384 5.833131 ACATCAAAGTGTCCTAACCAAACAT 59.167 36.000 0.00 0.00 0.00 2.71
384 385 5.197451 ACATCAAAGTGTCCTAACCAAACA 58.803 37.500 0.00 0.00 0.00 2.83
385 386 5.767816 ACATCAAAGTGTCCTAACCAAAC 57.232 39.130 0.00 0.00 0.00 2.93
386 387 5.008217 CGAACATCAAAGTGTCCTAACCAAA 59.992 40.000 0.00 0.00 0.00 3.28
387 388 4.513692 CGAACATCAAAGTGTCCTAACCAA 59.486 41.667 0.00 0.00 0.00 3.67
388 389 4.062293 CGAACATCAAAGTGTCCTAACCA 58.938 43.478 0.00 0.00 0.00 3.67
389 390 4.062991 ACGAACATCAAAGTGTCCTAACC 58.937 43.478 0.00 0.00 0.00 2.85
390 391 4.151867 GGACGAACATCAAAGTGTCCTAAC 59.848 45.833 2.09 0.00 42.00 2.34
391 392 4.312443 GGACGAACATCAAAGTGTCCTAA 58.688 43.478 2.09 0.00 42.00 2.69
392 393 3.306502 GGGACGAACATCAAAGTGTCCTA 60.307 47.826 8.88 0.00 44.12 2.94
393 394 2.550208 GGGACGAACATCAAAGTGTCCT 60.550 50.000 8.88 0.00 44.12 3.85
394 395 1.804748 GGGACGAACATCAAAGTGTCC 59.195 52.381 0.63 0.63 43.98 4.02
395 396 2.480419 CAGGGACGAACATCAAAGTGTC 59.520 50.000 0.00 0.00 0.00 3.67
396 397 2.158813 ACAGGGACGAACATCAAAGTGT 60.159 45.455 0.00 0.00 0.00 3.55
397 398 2.494059 ACAGGGACGAACATCAAAGTG 58.506 47.619 0.00 0.00 0.00 3.16
398 399 2.930826 ACAGGGACGAACATCAAAGT 57.069 45.000 0.00 0.00 0.00 2.66
399 400 4.513692 TGTTTACAGGGACGAACATCAAAG 59.486 41.667 0.00 0.00 0.00 2.77
400 401 4.452825 TGTTTACAGGGACGAACATCAAA 58.547 39.130 0.00 0.00 0.00 2.69
401 402 4.074627 TGTTTACAGGGACGAACATCAA 57.925 40.909 0.00 0.00 0.00 2.57
402 403 3.755112 TGTTTACAGGGACGAACATCA 57.245 42.857 0.00 0.00 0.00 3.07
403 404 4.454504 ACAATGTTTACAGGGACGAACATC 59.545 41.667 0.00 0.00 40.67 3.06
404 405 4.215399 CACAATGTTTACAGGGACGAACAT 59.785 41.667 0.00 0.00 42.66 2.71
405 406 3.562141 CACAATGTTTACAGGGACGAACA 59.438 43.478 0.00 0.00 36.55 3.18
406 407 3.810941 TCACAATGTTTACAGGGACGAAC 59.189 43.478 0.00 0.00 0.00 3.95
407 408 3.810941 GTCACAATGTTTACAGGGACGAA 59.189 43.478 0.00 0.00 0.00 3.85
408 409 3.181464 TGTCACAATGTTTACAGGGACGA 60.181 43.478 0.00 0.00 0.00 4.20
409 410 3.135225 TGTCACAATGTTTACAGGGACG 58.865 45.455 0.00 0.00 0.00 4.79
410 411 5.705609 AATGTCACAATGTTTACAGGGAC 57.294 39.130 4.88 0.00 0.00 4.46
411 412 9.521841 TTTATAATGTCACAATGTTTACAGGGA 57.478 29.630 4.88 0.00 0.00 4.20
420 421 9.416794 TGCGAAATTTTTATAATGTCACAATGT 57.583 25.926 0.00 0.00 0.00 2.71
423 424 9.684448 TCTTGCGAAATTTTTATAATGTCACAA 57.316 25.926 0.00 0.00 0.00 3.33
424 425 9.853555 ATCTTGCGAAATTTTTATAATGTCACA 57.146 25.926 0.00 0.00 0.00 3.58
433 434 9.474920 TTTGAGACAATCTTGCGAAATTTTTAT 57.525 25.926 0.00 0.00 0.00 1.40
434 435 8.864069 TTTGAGACAATCTTGCGAAATTTTTA 57.136 26.923 0.00 0.00 0.00 1.52
435 436 7.769272 TTTGAGACAATCTTGCGAAATTTTT 57.231 28.000 0.00 0.00 0.00 1.94
436 437 7.769272 TTTTGAGACAATCTTGCGAAATTTT 57.231 28.000 0.00 0.00 0.00 1.82
437 438 7.951530 ATTTTGAGACAATCTTGCGAAATTT 57.048 28.000 0.00 0.00 0.00 1.82
470 471 9.607285 GTTTGATGTCGTTGTTTTTATACATCT 57.393 29.630 12.79 0.00 42.24 2.90
471 472 9.607285 AGTTTGATGTCGTTGTTTTTATACATC 57.393 29.630 0.00 0.00 42.14 3.06
472 473 9.607285 GAGTTTGATGTCGTTGTTTTTATACAT 57.393 29.630 0.00 0.00 0.00 2.29
473 474 8.613482 TGAGTTTGATGTCGTTGTTTTTATACA 58.387 29.630 0.00 0.00 0.00 2.29
474 475 8.996988 TGAGTTTGATGTCGTTGTTTTTATAC 57.003 30.769 0.00 0.00 0.00 1.47
476 477 9.607285 GTATGAGTTTGATGTCGTTGTTTTTAT 57.393 29.630 0.00 0.00 0.00 1.40
477 478 8.613482 TGTATGAGTTTGATGTCGTTGTTTTTA 58.387 29.630 0.00 0.00 0.00 1.52
478 479 7.476667 TGTATGAGTTTGATGTCGTTGTTTTT 58.523 30.769 0.00 0.00 0.00 1.94
479 480 7.022055 TGTATGAGTTTGATGTCGTTGTTTT 57.978 32.000 0.00 0.00 0.00 2.43
480 481 6.260050 ACTGTATGAGTTTGATGTCGTTGTTT 59.740 34.615 0.00 0.00 0.00 2.83
481 482 5.758296 ACTGTATGAGTTTGATGTCGTTGTT 59.242 36.000 0.00 0.00 0.00 2.83
482 483 5.297547 ACTGTATGAGTTTGATGTCGTTGT 58.702 37.500 0.00 0.00 0.00 3.32
483 484 5.405269 TGACTGTATGAGTTTGATGTCGTTG 59.595 40.000 0.00 0.00 33.83 4.10
484 485 5.538118 TGACTGTATGAGTTTGATGTCGTT 58.462 37.500 0.00 0.00 33.83 3.85
485 486 5.134202 TGACTGTATGAGTTTGATGTCGT 57.866 39.130 0.00 0.00 33.83 4.34
486 487 5.807011 TGATGACTGTATGAGTTTGATGTCG 59.193 40.000 0.00 0.00 33.83 4.35
1139 4385 2.351253 GCTCTGCGATCATCGACTACAT 60.351 50.000 12.38 0.00 43.74 2.29
1149 4395 0.964700 CAGGATAGGCTCTGCGATCA 59.035 55.000 0.00 0.00 0.00 2.92
1172 4418 2.279582 ACGATCCTCAATCACACGAC 57.720 50.000 0.00 0.00 33.65 4.34
1282 4528 0.251341 AGCCTGCGGAAATCAACCTT 60.251 50.000 0.00 0.00 0.00 3.50
1378 4624 3.871006 GCGATGATCATGTTAAGGTGACA 59.129 43.478 14.30 0.00 0.00 3.58
2029 5277 8.736097 TGATAATACAGAACCCTACCATATGT 57.264 34.615 1.24 0.00 0.00 2.29
2600 5848 3.997952 GCCTTTTGCCCTCCCCCT 61.998 66.667 0.00 0.00 0.00 4.79
3034 6560 7.390718 AGGTAGTGAAAGTGCGAATTAAGAAAT 59.609 33.333 0.00 0.00 0.00 2.17
3404 6930 5.452255 TGAAGACCCTCCACGTATACTATT 58.548 41.667 0.56 0.00 0.00 1.73
3552 7078 4.473196 TCCATCCATACCAGCAGTAAAGAA 59.527 41.667 0.00 0.00 33.70 2.52
3750 7290 1.414919 ACGTTGAGGTAGGAAACTGCA 59.585 47.619 0.00 0.00 46.04 4.41
3860 7400 1.064952 CTCAAACCAAACACACCCGTC 59.935 52.381 0.00 0.00 0.00 4.79
3861 7401 1.099689 CTCAAACCAAACACACCCGT 58.900 50.000 0.00 0.00 0.00 5.28
3862 7402 1.064952 GACTCAAACCAAACACACCCG 59.935 52.381 0.00 0.00 0.00 5.28
4062 7604 1.003118 CCTTTGGGGTGAGTGAATCGA 59.997 52.381 0.00 0.00 0.00 3.59
4144 7945 1.517361 CCATGTGAGTCCAGCGCTA 59.483 57.895 10.99 0.00 0.00 4.26
4221 8024 3.437795 CTCGCCGGTACCAGACGT 61.438 66.667 13.54 0.00 0.00 4.34
4498 8311 1.994507 CTCCCTCTTCCCTGCTGCT 60.995 63.158 0.00 0.00 0.00 4.24
4502 8315 2.588989 CAGCTCCCTCTTCCCTGC 59.411 66.667 0.00 0.00 0.00 4.85
4509 8322 0.337773 TGAGATGTCCAGCTCCCTCT 59.662 55.000 9.82 0.00 42.79 3.69
4827 9231 8.768957 TTTGATTCAACTCATCTCTCTTGTAG 57.231 34.615 0.00 0.00 0.00 2.74
4891 9295 5.959594 TCAAATGATGGAATGGAATGGTTCT 59.040 36.000 0.00 0.00 0.00 3.01
5094 9498 2.079925 GCGTTCTGCAAGGAAAGAGAT 58.920 47.619 5.94 0.00 45.45 2.75
5209 9613 5.806502 CGAAGTTACACCGGACAATTATGTA 59.193 40.000 9.46 0.66 40.74 2.29
5210 9614 4.628333 CGAAGTTACACCGGACAATTATGT 59.372 41.667 9.46 1.87 44.25 2.29
5233 9637 8.778141 TGATACTCGATTTCGTTTGATAGTAC 57.222 34.615 0.00 0.00 40.80 2.73
5244 9648 4.504097 TGACATGCTTGATACTCGATTTCG 59.496 41.667 6.60 0.00 41.45 3.46
5250 9654 6.476706 TCAGTATTTGACATGCTTGATACTCG 59.523 38.462 6.60 5.05 30.28 4.18
5494 9898 5.281314 AGAAAGAAAGGGAGGTATAGAGCA 58.719 41.667 0.00 0.00 0.00 4.26
5520 9924 4.522789 GGGACAACTTTTAGGATCAAAGCA 59.477 41.667 4.39 0.00 35.02 3.91
5521 9925 4.522789 TGGGACAACTTTTAGGATCAAAGC 59.477 41.667 4.39 0.00 35.02 3.51
5759 10164 5.806654 ATGAACCCAGCAAAATAAACACT 57.193 34.783 0.00 0.00 0.00 3.55
5866 13438 6.238814 GGGTGGAACGTGAGAAGAAAATAAAA 60.239 38.462 0.00 0.00 38.12 1.52
6136 13728 2.089201 CTGCAGCAATGATGGAAGACA 58.911 47.619 0.00 0.00 0.00 3.41
6474 14066 7.297936 TGGACTATCTTGTTTCTGTCTTACA 57.702 36.000 0.00 0.00 0.00 2.41
6517 14109 6.121776 TCAAATAAAGAGCTCCCTAACACA 57.878 37.500 10.93 0.00 0.00 3.72
6638 14230 5.219633 CACAATTAACGCCTAGCACTTTTT 58.780 37.500 0.00 0.00 0.00 1.94
6639 14231 4.794169 CACAATTAACGCCTAGCACTTTT 58.206 39.130 0.00 0.00 0.00 2.27
6640 14232 3.365969 GCACAATTAACGCCTAGCACTTT 60.366 43.478 0.00 0.00 0.00 2.66
6641 14233 2.161609 GCACAATTAACGCCTAGCACTT 59.838 45.455 0.00 0.00 0.00 3.16
6642 14234 1.737793 GCACAATTAACGCCTAGCACT 59.262 47.619 0.00 0.00 0.00 4.40
6643 14235 1.529010 CGCACAATTAACGCCTAGCAC 60.529 52.381 0.00 0.00 0.00 4.40
6644 14236 0.724549 CGCACAATTAACGCCTAGCA 59.275 50.000 0.00 0.00 0.00 3.49
6645 14237 0.725117 ACGCACAATTAACGCCTAGC 59.275 50.000 0.00 0.00 0.00 3.42
6646 14238 2.268298 AGACGCACAATTAACGCCTAG 58.732 47.619 0.00 0.00 0.00 3.02
6647 14239 2.373540 AGACGCACAATTAACGCCTA 57.626 45.000 0.00 0.00 0.00 3.93
6648 14240 1.196808 CAAGACGCACAATTAACGCCT 59.803 47.619 0.00 0.00 0.00 5.52
6649 14241 1.602191 CAAGACGCACAATTAACGCC 58.398 50.000 0.00 0.00 0.00 5.68
6650 14242 0.974836 GCAAGACGCACAATTAACGC 59.025 50.000 0.00 0.00 41.79 4.84
6651 14243 1.602191 GGCAAGACGCACAATTAACG 58.398 50.000 0.00 0.00 45.17 3.18
6652 14244 1.602191 CGGCAAGACGCACAATTAAC 58.398 50.000 0.00 0.00 45.17 2.01
6674 14266 0.523072 TGATCAGAAAAGCGCAAGGC 59.477 50.000 11.47 0.00 44.05 4.35
6675 14267 2.995466 TTGATCAGAAAAGCGCAAGG 57.005 45.000 11.47 0.00 38.28 3.61
6682 14274 2.597305 GCATGCGCTTTGATCAGAAAAG 59.403 45.455 9.73 0.00 37.63 2.27
6683 14275 2.598589 GCATGCGCTTTGATCAGAAAA 58.401 42.857 9.73 0.00 34.30 2.29
6684 14276 2.267188 GCATGCGCTTTGATCAGAAA 57.733 45.000 9.73 0.00 34.30 2.52
6710 14302 3.664537 GCGCTTAATCTACGCCTAATTGC 60.665 47.826 0.00 0.00 46.63 3.56
6711 14303 4.053903 GCGCTTAATCTACGCCTAATTG 57.946 45.455 0.00 0.00 46.63 2.32
6719 14311 2.091277 GCATAGCTGCGCTTAATCTACG 59.909 50.000 9.73 0.00 40.44 3.51
6720 14312 3.713889 GCATAGCTGCGCTTAATCTAC 57.286 47.619 9.73 0.00 40.44 2.59
6732 14324 1.656652 AAACGCCTAGTGCATAGCTG 58.343 50.000 0.00 0.00 41.33 4.24
6733 14325 2.009774 CAAAACGCCTAGTGCATAGCT 58.990 47.619 0.00 0.00 41.33 3.32
6734 14326 1.531883 GCAAAACGCCTAGTGCATAGC 60.532 52.381 0.00 0.00 41.33 2.97
6735 14327 2.009774 AGCAAAACGCCTAGTGCATAG 58.990 47.619 0.00 0.00 44.04 2.23
6736 14328 2.107950 AGCAAAACGCCTAGTGCATA 57.892 45.000 0.00 0.00 44.04 3.14
6737 14329 2.107950 TAGCAAAACGCCTAGTGCAT 57.892 45.000 0.00 0.00 44.04 3.96
6738 14330 2.006888 GATAGCAAAACGCCTAGTGCA 58.993 47.619 3.89 0.00 44.04 4.57
6739 14331 1.004927 CGATAGCAAAACGCCTAGTGC 60.005 52.381 0.00 0.00 44.04 4.40
6740 14332 2.998668 CGATAGCAAAACGCCTAGTG 57.001 50.000 0.00 0.00 44.04 2.74
6760 14352 1.395826 AAGTGCGCCTAGGCTCTAGG 61.396 60.000 30.55 16.12 35.86 3.02
6761 14353 1.319541 TAAGTGCGCCTAGGCTCTAG 58.680 55.000 30.55 16.51 35.86 2.43
6762 14354 1.681793 CTTAAGTGCGCCTAGGCTCTA 59.318 52.381 30.55 14.20 35.86 2.43
6763 14355 0.461961 CTTAAGTGCGCCTAGGCTCT 59.538 55.000 30.55 21.51 38.30 4.09
6764 14356 1.154814 GCTTAAGTGCGCCTAGGCTC 61.155 60.000 30.55 24.16 39.32 4.70
6765 14357 1.153349 GCTTAAGTGCGCCTAGGCT 60.153 57.895 30.55 14.71 39.32 4.58
6766 14358 3.410958 GCTTAAGTGCGCCTAGGC 58.589 61.111 24.75 24.75 37.85 3.93
6802 14394 7.535940 GCAACGCATTGTACTCATAGTTAAAAA 59.464 33.333 0.00 0.00 38.17 1.94
6803 14395 7.018826 GCAACGCATTGTACTCATAGTTAAAA 58.981 34.615 0.00 0.00 38.17 1.52
6804 14396 6.370442 AGCAACGCATTGTACTCATAGTTAAA 59.630 34.615 0.00 0.00 38.17 1.52
6805 14397 5.872617 AGCAACGCATTGTACTCATAGTTAA 59.127 36.000 0.00 0.00 38.17 2.01
6806 14398 5.416083 AGCAACGCATTGTACTCATAGTTA 58.584 37.500 0.00 0.00 38.17 2.24
6807 14399 4.253685 AGCAACGCATTGTACTCATAGTT 58.746 39.130 0.00 0.00 38.17 2.24
6808 14400 3.861840 AGCAACGCATTGTACTCATAGT 58.138 40.909 0.00 0.00 38.17 2.12
6809 14401 4.085568 CGTAGCAACGCATTGTACTCATAG 60.086 45.833 0.00 0.00 43.12 2.23
6810 14402 3.794564 CGTAGCAACGCATTGTACTCATA 59.205 43.478 0.00 0.00 43.12 2.15
6811 14403 2.603110 CGTAGCAACGCATTGTACTCAT 59.397 45.455 0.00 0.00 43.12 2.90
6812 14404 1.989864 CGTAGCAACGCATTGTACTCA 59.010 47.619 0.00 0.00 43.12 3.41
6813 14405 2.696076 CGTAGCAACGCATTGTACTC 57.304 50.000 0.00 0.00 43.12 2.59
7052 14644 1.064017 TCCAGTTTGGAGCTTGTTGGT 60.064 47.619 0.00 0.00 42.67 3.67
7099 14691 7.979786 TTATAAGGATGGGTTAATTTTGGCA 57.020 32.000 0.00 0.00 0.00 4.92
7108 14700 6.183361 GCTCTCCACTTTATAAGGATGGGTTA 60.183 42.308 0.98 0.00 0.00 2.85
7154 14747 0.459899 ATCGAGCGGAAGTATGCACA 59.540 50.000 0.00 0.00 0.00 4.57
7155 14748 1.132588 GATCGAGCGGAAGTATGCAC 58.867 55.000 0.00 0.00 0.00 4.57
7156 14749 0.032130 GGATCGAGCGGAAGTATGCA 59.968 55.000 0.00 0.00 0.00 3.96
7232 14825 2.177531 CAAGTGGATGCACAGCGC 59.822 61.111 20.21 0.00 42.89 5.92
7258 14851 0.889306 CGGAGAAGTCCTCGAAAGGT 59.111 55.000 0.00 0.00 43.82 3.50
7563 15160 1.751351 CAACCCTCGCTACAGATCTCA 59.249 52.381 0.00 0.00 0.00 3.27
7565 15162 1.115467 CCAACCCTCGCTACAGATCT 58.885 55.000 0.00 0.00 0.00 2.75
7638 15243 1.684734 ACGCACGACTAGGGGGAAT 60.685 57.895 0.00 0.00 38.68 3.01
7641 15246 4.814294 GCACGCACGACTAGGGGG 62.814 72.222 0.00 0.00 42.62 5.40
7696 15301 0.462937 AGCCCACGCGTGCATATTAA 60.463 50.000 33.17 0.00 41.18 1.40
7763 15368 2.775384 AGTAAAGGGGAATATGCCGTCA 59.225 45.455 0.00 0.00 0.00 4.35
8073 15678 0.321996 GGAAGGTCGCTTCAGGACTT 59.678 55.000 5.35 0.00 35.19 3.01
8295 15900 1.522092 CGGAATGTAGCAGCTGGGA 59.478 57.895 17.12 0.00 0.00 4.37
8509 16114 4.510167 ACAAGGAAACCTGGATATCCTG 57.490 45.455 22.35 20.67 41.39 3.86
8561 16171 1.503818 TTCCAAAGTCGAAGCCACGC 61.504 55.000 0.00 0.00 0.00 5.34
9045 16656 7.654923 GCACTATCTGTATCATCTCACATCAAA 59.345 37.037 0.00 0.00 0.00 2.69
9105 16716 7.786046 TGAGAGAAACCTACACTTGGTTATA 57.214 36.000 0.00 0.00 45.99 0.98
9256 16867 4.393062 AGTTGACATGAATCTAGCCAAACG 59.607 41.667 0.00 0.00 0.00 3.60


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.