Multiple sequence alignment - TraesCS5D01G114000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G114000 chr5D 100.000 2576 0 0 1 2576 133280681 133283256 0.000000e+00 4758
1 TraesCS5D01G114000 chr5D 96.142 337 13 0 1 337 133244443 133244779 3.750000e-153 551
2 TraesCS5D01G114000 chr5D 96.209 211 7 1 2117 2327 77866814 77866605 6.820000e-91 344
3 TraesCS5D01G114000 chr5B 95.164 1675 43 13 460 2120 144467185 144468835 0.000000e+00 2610
4 TraesCS5D01G114000 chr5B 91.176 272 21 1 2116 2384 643942321 643942050 1.460000e-97 366
5 TraesCS5D01G114000 chr5B 96.970 198 6 0 2379 2576 144468831 144469028 1.480000e-87 333
6 TraesCS5D01G114000 chr5B 87.097 93 9 1 2293 2382 270324924 270325016 4.530000e-18 102
7 TraesCS5D01G114000 chr1A 94.955 337 17 0 1 337 514878374 514878038 1.760000e-146 529
8 TraesCS5D01G114000 chr1A 94.659 337 18 0 1 337 515131906 515131570 8.170000e-145 523
9 TraesCS5D01G114000 chr1A 94.328 335 19 0 3 337 514875719 514875385 4.920000e-142 514
10 TraesCS5D01G114000 chr1A 94.065 337 20 0 1 337 515134564 515134228 1.770000e-141 512
11 TraesCS5D01G114000 chr5A 90.862 383 27 3 1692 2066 149373942 149373560 8.220000e-140 507
12 TraesCS5D01G114000 chr5A 94.248 226 13 0 603 828 149385169 149384944 1.900000e-91 346
13 TraesCS5D01G114000 chr5A 87.261 157 2 6 825 971 149374097 149373949 2.050000e-36 163
14 TraesCS5D01G114000 chr2A 93.769 337 19 2 1 337 778445037 778445371 2.960000e-139 505
15 TraesCS5D01G114000 chr2A 93.472 337 22 0 1 337 80906591 80906255 3.830000e-138 501
16 TraesCS5D01G114000 chr2A 91.736 121 10 0 338 458 755383515 755383635 4.410000e-38 169
17 TraesCS5D01G114000 chr2B 93.510 339 17 5 1 337 798491424 798491759 1.380000e-137 499
18 TraesCS5D01G114000 chr2B 90.400 125 11 1 338 462 799863361 799863484 2.050000e-36 163
19 TraesCS5D01G114000 chr2B 87.097 93 9 1 2293 2382 82441971 82442063 4.530000e-18 102
20 TraesCS5D01G114000 chr3A 92.941 340 23 1 1 340 737644811 737644473 6.400000e-136 494
21 TraesCS5D01G114000 chr3A 91.597 119 9 1 340 458 695952745 695952628 2.050000e-36 163
22 TraesCS5D01G114000 chr4D 91.353 266 16 3 2122 2380 278325578 278325843 8.770000e-95 357
23 TraesCS5D01G114000 chr4D 87.912 91 8 1 2293 2380 303495014 303495104 1.260000e-18 104
24 TraesCS5D01G114000 chr4D 86.813 91 8 2 2293 2380 68020051 68020140 5.870000e-17 99
25 TraesCS5D01G114000 chr4A 96.682 211 7 0 2116 2326 11843047 11842837 4.080000e-93 351
26 TraesCS5D01G114000 chr2D 89.384 292 9 2 2112 2382 540821517 540821227 5.280000e-92 348
27 TraesCS5D01G114000 chr2D 87.097 93 7 3 2294 2383 379929234 379929144 1.630000e-17 100
28 TraesCS5D01G114000 chrUn 89.493 276 22 4 2117 2385 108934498 108934223 2.450000e-90 342
29 TraesCS5D01G114000 chr3D 89.003 291 10 2 2114 2383 593683400 593683689 8.830000e-90 340
30 TraesCS5D01G114000 chr1B 88.372 301 11 4 2106 2384 687414934 687415232 8.830000e-90 340
31 TraesCS5D01G114000 chr1B 87.319 276 25 4 2117 2385 265583847 265583575 8.950000e-80 307
32 TraesCS5D01G114000 chr1B 89.600 125 13 0 338 462 296236178 296236302 2.650000e-35 159
33 TraesCS5D01G114000 chr7A 91.803 122 9 1 338 458 641079479 641079358 4.410000e-38 169
34 TraesCS5D01G114000 chr6A 91.057 123 6 5 338 458 496374452 496374333 7.380000e-36 161
35 TraesCS5D01G114000 chr6A 89.683 126 11 2 338 462 301793886 301794010 2.650000e-35 159
36 TraesCS5D01G114000 chr6A 90.164 122 10 2 338 458 301798829 301798949 9.540000e-35 158
37 TraesCS5D01G114000 chr7D 89.600 125 12 1 338 462 577630004 577630127 9.540000e-35 158


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G114000 chr5D 133280681 133283256 2575 False 4758.0 4758 100.0000 1 2576 1 chr5D.!!$F2 2575
1 TraesCS5D01G114000 chr5B 144467185 144469028 1843 False 1471.5 2610 96.0670 460 2576 2 chr5B.!!$F2 2116
2 TraesCS5D01G114000 chr1A 514875385 514878374 2989 True 521.5 529 94.6415 1 337 2 chr1A.!!$R1 336
3 TraesCS5D01G114000 chr1A 515131570 515134564 2994 True 517.5 523 94.3620 1 337 2 chr1A.!!$R2 336
4 TraesCS5D01G114000 chr5A 149373560 149374097 537 True 335.0 507 89.0615 825 2066 2 chr5A.!!$R2 1241

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
309 310 0.030908 GCTTGGTCCTCGGTAGATCG 59.969 60.0 0.0 0.0 0.0 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2118 2939 0.105709 CCTGGAAACAAACACCCCCT 60.106 55.0 0.0 0.0 42.06 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.121786 GTTGCACTTGAAGTCGTACGA 58.878 47.619 15.28 15.28 0.00 3.43
29 30 4.469552 CACTTGAAGTCGTACGATGTGTA 58.530 43.478 22.57 6.70 0.00 2.90
39 40 4.509230 TCGTACGATGTGTAGACAGGATAC 59.491 45.833 15.28 0.33 34.87 2.24
76 77 5.520751 AGTAGGACACTTGTATCCTAAGCT 58.479 41.667 9.13 1.79 46.74 3.74
80 81 5.485708 AGGACACTTGTATCCTAAGCTTCTT 59.514 40.000 0.00 0.00 43.85 2.52
112 113 2.231964 GGGGTAGACACACGATGTAACA 59.768 50.000 0.00 0.00 43.56 2.41
200 201 0.668096 TGCGGTATTGTGACGGTGTC 60.668 55.000 0.00 0.00 0.00 3.67
201 202 1.680105 GCGGTATTGTGACGGTGTCG 61.680 60.000 0.00 0.00 43.02 4.35
309 310 0.030908 GCTTGGTCCTCGGTAGATCG 59.969 60.000 0.00 0.00 0.00 3.69
314 315 1.227764 TCCTCGGTAGATCGACGGG 60.228 63.158 12.41 6.65 35.18 5.28
337 338 3.059800 GCGCCTCGGATTTATTCTAACAC 60.060 47.826 0.00 0.00 0.00 3.32
338 339 4.369182 CGCCTCGGATTTATTCTAACACT 58.631 43.478 0.00 0.00 0.00 3.55
341 342 5.585047 GCCTCGGATTTATTCTAACACTTGT 59.415 40.000 0.00 0.00 0.00 3.16
342 343 6.759827 GCCTCGGATTTATTCTAACACTTGTA 59.240 38.462 0.00 0.00 0.00 2.41
354 355 7.973048 TCTAACACTTGTAATACTCCTCCAT 57.027 36.000 0.00 0.00 0.00 3.41
355 356 8.008513 TCTAACACTTGTAATACTCCTCCATC 57.991 38.462 0.00 0.00 0.00 3.51
356 357 6.620877 AACACTTGTAATACTCCTCCATCA 57.379 37.500 0.00 0.00 0.00 3.07
358 359 7.914427 ACACTTGTAATACTCCTCCATCATA 57.086 36.000 0.00 0.00 0.00 2.15
360 361 7.565398 ACACTTGTAATACTCCTCCATCATAGT 59.435 37.037 0.00 0.00 0.00 2.12
361 362 7.869937 CACTTGTAATACTCCTCCATCATAGTG 59.130 40.741 0.00 0.00 0.00 2.74
362 363 7.785028 ACTTGTAATACTCCTCCATCATAGTGA 59.215 37.037 0.00 0.00 0.00 3.41
364 365 8.727100 TGTAATACTCCTCCATCATAGTGATT 57.273 34.615 0.00 0.00 34.28 2.57
365 366 8.588472 TGTAATACTCCTCCATCATAGTGATTG 58.412 37.037 0.00 0.00 34.28 2.67
366 367 7.623999 AATACTCCTCCATCATAGTGATTGT 57.376 36.000 0.00 0.00 34.28 2.71
368 369 4.063689 CTCCTCCATCATAGTGATTGTGC 58.936 47.826 0.00 0.00 34.28 4.57
369 370 3.144506 CCTCCATCATAGTGATTGTGCC 58.855 50.000 0.00 0.00 34.28 5.01
370 371 3.181447 CCTCCATCATAGTGATTGTGCCT 60.181 47.826 0.00 0.00 34.28 4.75
371 372 4.458397 CTCCATCATAGTGATTGTGCCTT 58.542 43.478 0.00 0.00 34.28 4.35
372 373 4.454678 TCCATCATAGTGATTGTGCCTTC 58.545 43.478 0.00 0.00 34.28 3.46
373 374 3.249320 CCATCATAGTGATTGTGCCTTCG 59.751 47.826 0.00 0.00 34.28 3.79
374 375 3.610040 TCATAGTGATTGTGCCTTCGT 57.390 42.857 0.00 0.00 0.00 3.85
375 376 3.261580 TCATAGTGATTGTGCCTTCGTG 58.738 45.455 0.00 0.00 0.00 4.35
376 377 1.438651 TAGTGATTGTGCCTTCGTGC 58.561 50.000 0.00 0.00 0.00 5.34
377 378 1.154413 GTGATTGTGCCTTCGTGCG 60.154 57.895 0.00 0.00 0.00 5.34
378 379 1.596752 TGATTGTGCCTTCGTGCGT 60.597 52.632 0.00 0.00 0.00 5.24
379 380 1.132640 GATTGTGCCTTCGTGCGTC 59.867 57.895 0.00 0.00 0.00 5.19
380 381 2.240612 GATTGTGCCTTCGTGCGTCC 62.241 60.000 0.00 0.00 0.00 4.79
385 386 2.126071 CCTTCGTGCGTCCGTGAT 60.126 61.111 0.00 0.00 0.00 3.06
386 387 1.736645 CCTTCGTGCGTCCGTGATT 60.737 57.895 0.00 0.00 0.00 2.57
387 388 1.289109 CCTTCGTGCGTCCGTGATTT 61.289 55.000 0.00 0.00 0.00 2.17
388 389 0.511221 CTTCGTGCGTCCGTGATTTT 59.489 50.000 0.00 0.00 0.00 1.82
389 390 0.509499 TTCGTGCGTCCGTGATTTTC 59.491 50.000 0.00 0.00 0.00 2.29
390 391 0.319211 TCGTGCGTCCGTGATTTTCT 60.319 50.000 0.00 0.00 0.00 2.52
391 392 0.511221 CGTGCGTCCGTGATTTTCTT 59.489 50.000 0.00 0.00 0.00 2.52
392 393 1.461888 CGTGCGTCCGTGATTTTCTTC 60.462 52.381 0.00 0.00 0.00 2.87
393 394 1.136057 GTGCGTCCGTGATTTTCTTCC 60.136 52.381 0.00 0.00 0.00 3.46
394 395 0.094730 GCGTCCGTGATTTTCTTCCG 59.905 55.000 0.00 0.00 0.00 4.30
395 396 1.425412 CGTCCGTGATTTTCTTCCGT 58.575 50.000 0.00 0.00 0.00 4.69
396 397 2.598589 CGTCCGTGATTTTCTTCCGTA 58.401 47.619 0.00 0.00 0.00 4.02
397 398 2.988493 CGTCCGTGATTTTCTTCCGTAA 59.012 45.455 0.00 0.00 0.00 3.18
398 399 3.429543 CGTCCGTGATTTTCTTCCGTAAA 59.570 43.478 0.00 0.00 0.00 2.01
399 400 4.433805 CGTCCGTGATTTTCTTCCGTAAAG 60.434 45.833 0.00 0.00 36.22 1.85
400 401 4.687483 GTCCGTGATTTTCTTCCGTAAAGA 59.313 41.667 0.00 0.00 42.35 2.52
401 402 5.350640 GTCCGTGATTTTCTTCCGTAAAGAT 59.649 40.000 0.00 0.00 43.50 2.40
402 403 5.935789 TCCGTGATTTTCTTCCGTAAAGATT 59.064 36.000 0.00 0.00 43.50 2.40
403 404 6.428771 TCCGTGATTTTCTTCCGTAAAGATTT 59.571 34.615 0.00 0.00 43.50 2.17
404 405 7.040961 TCCGTGATTTTCTTCCGTAAAGATTTT 60.041 33.333 0.00 0.00 43.50 1.82
405 406 7.270579 CCGTGATTTTCTTCCGTAAAGATTTTC 59.729 37.037 0.00 0.00 43.50 2.29
406 407 7.801315 CGTGATTTTCTTCCGTAAAGATTTTCA 59.199 33.333 0.00 1.19 43.50 2.69
407 408 8.902735 GTGATTTTCTTCCGTAAAGATTTTCAC 58.097 33.333 12.95 12.95 43.50 3.18
408 409 7.801315 TGATTTTCTTCCGTAAAGATTTTCACG 59.199 33.333 0.00 0.00 43.50 4.35
409 410 6.607735 TTTCTTCCGTAAAGATTTTCACGT 57.392 33.333 0.00 0.00 43.50 4.49
410 411 7.712264 TTTCTTCCGTAAAGATTTTCACGTA 57.288 32.000 0.00 0.00 43.50 3.57
411 412 7.712264 TTCTTCCGTAAAGATTTTCACGTAA 57.288 32.000 0.00 0.00 43.50 3.18
412 413 7.712264 TCTTCCGTAAAGATTTTCACGTAAA 57.288 32.000 0.00 0.00 39.12 2.01
413 414 8.140677 TCTTCCGTAAAGATTTTCACGTAAAA 57.859 30.769 0.00 0.00 39.12 1.52
414 415 8.610896 TCTTCCGTAAAGATTTTCACGTAAAAA 58.389 29.630 0.00 0.00 39.12 1.94
415 416 9.389570 CTTCCGTAAAGATTTTCACGTAAAAAT 57.610 29.630 9.18 9.18 40.37 1.82
427 428 9.982291 TTTTCACGTAAAAATATGTATGCTCTC 57.018 29.630 0.00 0.00 34.11 3.20
428 429 7.389603 TCACGTAAAAATATGTATGCTCTCG 57.610 36.000 0.00 0.00 0.00 4.04
429 430 6.976349 TCACGTAAAAATATGTATGCTCTCGT 59.024 34.615 0.00 0.00 0.00 4.18
430 431 7.043656 TCACGTAAAAATATGTATGCTCTCGTG 60.044 37.037 0.00 0.00 41.93 4.35
431 432 6.755141 ACGTAAAAATATGTATGCTCTCGTGT 59.245 34.615 0.00 0.00 0.00 4.49
432 433 7.043590 ACGTAAAAATATGTATGCTCTCGTGTC 60.044 37.037 0.00 0.00 0.00 3.67
433 434 7.167635 CGTAAAAATATGTATGCTCTCGTGTCT 59.832 37.037 0.00 0.00 0.00 3.41
434 435 7.470289 AAAAATATGTATGCTCTCGTGTCTC 57.530 36.000 0.00 0.00 0.00 3.36
435 436 2.765108 ATGTATGCTCTCGTGTCTCG 57.235 50.000 0.00 0.00 41.41 4.04
436 437 1.450025 TGTATGCTCTCGTGTCTCGT 58.550 50.000 0.00 0.00 40.80 4.18
437 438 1.810755 TGTATGCTCTCGTGTCTCGTT 59.189 47.619 0.00 0.00 40.80 3.85
438 439 2.228103 TGTATGCTCTCGTGTCTCGTTT 59.772 45.455 0.00 0.00 40.80 3.60
439 440 3.437741 TGTATGCTCTCGTGTCTCGTTTA 59.562 43.478 0.00 0.00 40.80 2.01
440 441 3.784701 ATGCTCTCGTGTCTCGTTTAT 57.215 42.857 0.00 0.00 40.80 1.40
441 442 3.132629 TGCTCTCGTGTCTCGTTTATC 57.867 47.619 0.00 0.00 40.80 1.75
442 443 2.747989 TGCTCTCGTGTCTCGTTTATCT 59.252 45.455 0.00 0.00 40.80 1.98
443 444 3.181509 TGCTCTCGTGTCTCGTTTATCTC 60.182 47.826 0.00 0.00 40.80 2.75
444 445 3.599338 CTCTCGTGTCTCGTTTATCTCG 58.401 50.000 0.00 0.00 40.80 4.04
445 446 2.998670 TCTCGTGTCTCGTTTATCTCGT 59.001 45.455 0.00 0.00 40.80 4.18
446 447 3.434641 TCTCGTGTCTCGTTTATCTCGTT 59.565 43.478 0.00 0.00 40.80 3.85
447 448 4.627035 TCTCGTGTCTCGTTTATCTCGTTA 59.373 41.667 0.00 0.00 40.80 3.18
448 449 5.292834 TCTCGTGTCTCGTTTATCTCGTTAT 59.707 40.000 0.00 0.00 40.80 1.89
449 450 5.872635 TCGTGTCTCGTTTATCTCGTTATT 58.127 37.500 0.00 0.00 40.80 1.40
450 451 7.003939 TCGTGTCTCGTTTATCTCGTTATTA 57.996 36.000 0.00 0.00 40.80 0.98
451 452 7.633621 TCGTGTCTCGTTTATCTCGTTATTAT 58.366 34.615 0.00 0.00 40.80 1.28
452 453 7.795734 TCGTGTCTCGTTTATCTCGTTATTATC 59.204 37.037 0.00 0.00 40.80 1.75
453 454 7.797587 CGTGTCTCGTTTATCTCGTTATTATCT 59.202 37.037 0.00 0.00 34.52 1.98
454 455 8.893884 GTGTCTCGTTTATCTCGTTATTATCTG 58.106 37.037 0.00 0.00 0.00 2.90
455 456 8.833493 TGTCTCGTTTATCTCGTTATTATCTGA 58.167 33.333 0.00 0.00 0.00 3.27
456 457 9.105206 GTCTCGTTTATCTCGTTATTATCTGAC 57.895 37.037 0.00 0.00 0.00 3.51
457 458 8.833493 TCTCGTTTATCTCGTTATTATCTGACA 58.167 33.333 0.00 0.00 0.00 3.58
458 459 9.613957 CTCGTTTATCTCGTTATTATCTGACAT 57.386 33.333 0.00 0.00 0.00 3.06
500 501 5.291905 ACTATGAAAACCGATTCCCCTAG 57.708 43.478 0.00 0.00 0.00 3.02
557 558 2.561478 TTGCCTACACCTGGAGTTTC 57.439 50.000 0.00 0.00 0.00 2.78
559 560 1.347707 TGCCTACACCTGGAGTTTCTG 59.652 52.381 0.00 0.00 0.00 3.02
605 607 1.993370 GAGTCGTGACGCAAGCTTAAT 59.007 47.619 0.00 0.00 45.62 1.40
758 760 3.433031 CCCATATCGGCAAAGTTGGTCTA 60.433 47.826 0.00 0.00 0.00 2.59
795 804 3.782244 CGACGCACTTGCTGCTCC 61.782 66.667 0.00 0.00 44.64 4.70
852 862 0.533085 GGAGGAAATCTAGCGCCACC 60.533 60.000 2.29 0.00 0.00 4.61
991 1010 1.611977 CACTTCTAGACGTGGGTGTCA 59.388 52.381 19.08 0.00 41.41 3.58
992 1011 2.231478 CACTTCTAGACGTGGGTGTCAT 59.769 50.000 19.08 0.00 41.41 3.06
993 1012 2.231478 ACTTCTAGACGTGGGTGTCATG 59.769 50.000 0.26 0.00 41.41 3.07
994 1013 1.182667 TCTAGACGTGGGTGTCATGG 58.817 55.000 0.00 0.00 41.41 3.66
995 1014 0.460284 CTAGACGTGGGTGTCATGGC 60.460 60.000 0.00 0.00 41.41 4.40
996 1015 1.188871 TAGACGTGGGTGTCATGGCA 61.189 55.000 0.00 0.00 42.89 4.92
997 1016 2.032528 ACGTGGGTGTCATGGCAG 59.967 61.111 0.00 0.00 36.71 4.85
998 1017 3.434319 CGTGGGTGTCATGGCAGC 61.434 66.667 21.00 21.00 36.26 5.25
1111 1130 3.311110 TCACCGACAGCCAGACCC 61.311 66.667 0.00 0.00 0.00 4.46
1209 1228 2.181021 GCCGTCGGGTACAGTCTG 59.819 66.667 14.38 0.00 34.97 3.51
1377 1813 4.214327 CTCCTCGGGAAGCTCGGC 62.214 72.222 0.00 0.00 0.00 5.54
1515 1951 0.179067 TCTCCGCGTTCAACCTGTTT 60.179 50.000 4.92 0.00 0.00 2.83
1544 1980 3.058160 CGGCAACAAGGGGAGCAG 61.058 66.667 0.00 0.00 0.00 4.24
1561 1997 3.354467 AGCAGTAGTACTAGAAACGGCT 58.646 45.455 13.34 13.34 38.32 5.52
1647 2083 7.932491 CAGATTTCAGAATGTAGAGTGGATCAT 59.068 37.037 0.00 0.00 37.40 2.45
1650 2086 6.402456 TCAGAATGTAGAGTGGATCATGAG 57.598 41.667 0.09 0.00 37.40 2.90
1651 2087 6.131961 TCAGAATGTAGAGTGGATCATGAGA 58.868 40.000 0.09 0.00 37.40 3.27
1652 2088 6.781507 TCAGAATGTAGAGTGGATCATGAGAT 59.218 38.462 0.09 0.00 37.40 2.75
1653 2089 7.039853 TCAGAATGTAGAGTGGATCATGAGATC 60.040 40.741 0.09 0.00 43.09 2.75
1666 2102 3.823304 TCATGAGATCGATCGGTGAATCT 59.177 43.478 19.33 15.45 0.00 2.40
1842 2278 6.048732 TGAAGCTGGTGTATATGTGAAAGA 57.951 37.500 0.00 0.00 0.00 2.52
1843 2279 6.653020 TGAAGCTGGTGTATATGTGAAAGAT 58.347 36.000 0.00 0.00 0.00 2.40
2085 2906 2.586792 GGATGCTCAGCCCGAAGT 59.413 61.111 0.00 0.00 0.00 3.01
2098 2919 0.461548 CCGAAGTGAGCATGCTAGGA 59.538 55.000 22.74 4.65 0.00 2.94
2115 2936 2.481289 GGATACTGGCAGGATAAGGC 57.519 55.000 20.34 3.37 0.00 4.35
2116 2937 1.981495 GGATACTGGCAGGATAAGGCT 59.019 52.381 20.34 0.00 0.00 4.58
2117 2938 3.173965 GGATACTGGCAGGATAAGGCTA 58.826 50.000 20.34 0.00 0.00 3.93
2118 2939 3.583086 GGATACTGGCAGGATAAGGCTAA 59.417 47.826 20.34 0.00 0.00 3.09
2119 2940 4.323104 GGATACTGGCAGGATAAGGCTAAG 60.323 50.000 20.34 0.00 0.00 2.18
2121 2942 1.072965 CTGGCAGGATAAGGCTAAGGG 59.927 57.143 6.61 0.00 0.00 3.95
2125 2946 1.421646 CAGGATAAGGCTAAGGGGGTG 59.578 57.143 0.00 0.00 0.00 4.61
2126 2947 1.010917 AGGATAAGGCTAAGGGGGTGT 59.989 52.381 0.00 0.00 0.00 4.16
2127 2948 1.850998 GGATAAGGCTAAGGGGGTGTT 59.149 52.381 0.00 0.00 0.00 3.32
2128 2949 2.243994 GGATAAGGCTAAGGGGGTGTTT 59.756 50.000 0.00 0.00 0.00 2.83
2129 2950 2.891191 TAAGGCTAAGGGGGTGTTTG 57.109 50.000 0.00 0.00 0.00 2.93
2130 2951 0.857675 AAGGCTAAGGGGGTGTTTGT 59.142 50.000 0.00 0.00 0.00 2.83
2131 2952 0.857675 AGGCTAAGGGGGTGTTTGTT 59.142 50.000 0.00 0.00 0.00 2.83
2132 2953 1.219469 AGGCTAAGGGGGTGTTTGTTT 59.781 47.619 0.00 0.00 0.00 2.83
2133 2954 1.616865 GGCTAAGGGGGTGTTTGTTTC 59.383 52.381 0.00 0.00 0.00 2.78
2134 2955 1.616865 GCTAAGGGGGTGTTTGTTTCC 59.383 52.381 0.00 0.00 0.00 3.13
2135 2956 2.952116 CTAAGGGGGTGTTTGTTTCCA 58.048 47.619 0.00 0.00 0.00 3.53
2136 2957 1.788229 AAGGGGGTGTTTGTTTCCAG 58.212 50.000 0.00 0.00 0.00 3.86
2137 2958 0.105709 AGGGGGTGTTTGTTTCCAGG 60.106 55.000 0.00 0.00 0.00 4.45
2138 2959 1.118965 GGGGGTGTTTGTTTCCAGGG 61.119 60.000 0.00 0.00 0.00 4.45
2139 2960 0.105913 GGGGTGTTTGTTTCCAGGGA 60.106 55.000 0.00 0.00 0.00 4.20
2141 2962 1.411074 GGGTGTTTGTTTCCAGGGACT 60.411 52.381 0.00 0.00 43.88 3.85
2142 2963 2.384828 GGTGTTTGTTTCCAGGGACTT 58.615 47.619 0.00 0.00 34.60 3.01
2143 2964 3.558033 GGTGTTTGTTTCCAGGGACTTA 58.442 45.455 0.00 0.00 34.60 2.24
2144 2965 4.149598 GGTGTTTGTTTCCAGGGACTTAT 58.850 43.478 0.00 0.00 34.60 1.73
2145 2966 4.587262 GGTGTTTGTTTCCAGGGACTTATT 59.413 41.667 0.00 0.00 34.60 1.40
2147 2968 4.586841 TGTTTGTTTCCAGGGACTTATTGG 59.413 41.667 0.00 0.00 34.60 3.16
2148 2969 4.463050 TTGTTTCCAGGGACTTATTGGT 57.537 40.909 0.00 0.00 34.60 3.67
2149 2970 4.463050 TGTTTCCAGGGACTTATTGGTT 57.537 40.909 0.00 0.00 34.60 3.67
2150 2971 4.810345 TGTTTCCAGGGACTTATTGGTTT 58.190 39.130 0.00 0.00 34.60 3.27
2151 2972 5.954757 TGTTTCCAGGGACTTATTGGTTTA 58.045 37.500 0.00 0.00 34.60 2.01
2153 2974 4.855298 TCCAGGGACTTATTGGTTTAGG 57.145 45.455 0.00 0.00 34.60 2.69
2154 2975 3.526019 TCCAGGGACTTATTGGTTTAGGG 59.474 47.826 0.00 0.00 34.60 3.53
2155 2976 3.526019 CCAGGGACTTATTGGTTTAGGGA 59.474 47.826 0.00 0.00 34.60 4.20
2156 2977 4.524053 CAGGGACTTATTGGTTTAGGGAC 58.476 47.826 0.00 0.00 34.60 4.46
2157 2978 4.227527 CAGGGACTTATTGGTTTAGGGACT 59.772 45.833 0.00 0.00 39.39 3.85
2158 2979 4.856182 AGGGACTTATTGGTTTAGGGACTT 59.144 41.667 0.00 0.00 34.75 3.01
2159 2980 4.948004 GGGACTTATTGGTTTAGGGACTTG 59.052 45.833 0.00 0.00 41.75 3.16
2160 2981 5.280830 GGGACTTATTGGTTTAGGGACTTGA 60.281 44.000 0.00 0.00 41.75 3.02
2161 2982 6.243148 GGACTTATTGGTTTAGGGACTTGAA 58.757 40.000 0.00 0.00 41.75 2.69
2162 2983 6.717997 GGACTTATTGGTTTAGGGACTTGAAA 59.282 38.462 0.00 0.00 41.75 2.69
2163 2984 7.231925 GGACTTATTGGTTTAGGGACTTGAAAA 59.768 37.037 0.00 0.00 41.75 2.29
2190 3011 8.757307 ATCCCTATAAGTCCCATCTAAATCAA 57.243 34.615 0.00 0.00 0.00 2.57
2191 3012 8.575736 TCCCTATAAGTCCCATCTAAATCAAA 57.424 34.615 0.00 0.00 0.00 2.69
2192 3013 8.437575 TCCCTATAAGTCCCATCTAAATCAAAC 58.562 37.037 0.00 0.00 0.00 2.93
2193 3014 8.217799 CCCTATAAGTCCCATCTAAATCAAACA 58.782 37.037 0.00 0.00 0.00 2.83
2194 3015 9.277783 CCTATAAGTCCCATCTAAATCAAACAG 57.722 37.037 0.00 0.00 0.00 3.16
2197 3018 7.693969 AAGTCCCATCTAAATCAAACAGAAG 57.306 36.000 0.00 0.00 0.00 2.85
2198 3019 6.183347 AGTCCCATCTAAATCAAACAGAAGG 58.817 40.000 0.00 0.00 0.00 3.46
2199 3020 5.358160 GTCCCATCTAAATCAAACAGAAGGG 59.642 44.000 5.03 5.03 44.94 3.95
2200 3021 5.509498 CCCATCTAAATCAAACAGAAGGGA 58.491 41.667 5.40 0.00 45.96 4.20
2201 3022 6.068853 TCCCATCTAAATCAAACAGAAGGGAT 60.069 38.462 9.21 0.00 46.35 3.85
2202 3023 6.608808 CCCATCTAAATCAAACAGAAGGGATT 59.391 38.462 5.40 0.00 45.96 3.01
2203 3024 7.124750 CCCATCTAAATCAAACAGAAGGGATTT 59.875 37.037 5.40 0.00 45.96 2.17
2204 3025 9.189156 CCATCTAAATCAAACAGAAGGGATTTA 57.811 33.333 0.00 0.00 39.76 1.40
2209 3030 8.539117 AAATCAAACAGAAGGGATTTATAGGG 57.461 34.615 0.00 0.00 37.98 3.53
2210 3031 6.901615 TCAAACAGAAGGGATTTATAGGGA 57.098 37.500 0.00 0.00 0.00 4.20
2211 3032 6.659824 TCAAACAGAAGGGATTTATAGGGAC 58.340 40.000 0.00 0.00 0.00 4.46
2212 3033 6.447084 TCAAACAGAAGGGATTTATAGGGACT 59.553 38.462 0.00 0.00 46.37 3.85
2213 3034 6.910259 AACAGAAGGGATTTATAGGGACTT 57.090 37.500 0.00 0.00 41.75 3.01
2214 3035 8.272173 CAAACAGAAGGGATTTATAGGGACTTA 58.728 37.037 0.00 0.00 41.75 2.24
2215 3036 8.401955 AACAGAAGGGATTTATAGGGACTTAA 57.598 34.615 0.00 0.00 41.75 1.85
2216 3037 8.401955 ACAGAAGGGATTTATAGGGACTTAAA 57.598 34.615 0.00 0.00 41.75 1.52
2217 3038 8.495260 ACAGAAGGGATTTATAGGGACTTAAAG 58.505 37.037 0.00 0.00 41.75 1.85
2218 3039 8.495260 CAGAAGGGATTTATAGGGACTTAAAGT 58.505 37.037 0.00 0.00 41.75 2.66
2219 3040 8.495260 AGAAGGGATTTATAGGGACTTAAAGTG 58.505 37.037 0.00 0.00 41.75 3.16
2220 3041 7.150447 AGGGATTTATAGGGACTTAAAGTGG 57.850 40.000 0.00 0.00 41.75 4.00
2221 3042 6.102762 AGGGATTTATAGGGACTTAAAGTGGG 59.897 42.308 0.00 0.00 41.75 4.61
2222 3043 5.768662 GGATTTATAGGGACTTAAAGTGGGC 59.231 44.000 0.00 0.00 41.75 5.36
2223 3044 5.782677 TTTATAGGGACTTAAAGTGGGCA 57.217 39.130 0.00 0.00 41.75 5.36
2224 3045 5.987019 TTATAGGGACTTAAAGTGGGCAT 57.013 39.130 0.00 0.00 41.75 4.40
2225 3046 4.881157 ATAGGGACTTAAAGTGGGCATT 57.119 40.909 0.00 0.00 41.75 3.56
2226 3047 3.542969 AGGGACTTAAAGTGGGCATTT 57.457 42.857 0.00 0.00 27.25 2.32
2227 3048 3.165071 AGGGACTTAAAGTGGGCATTTG 58.835 45.455 0.00 0.00 27.25 2.32
2228 3049 3.161866 GGGACTTAAAGTGGGCATTTGA 58.838 45.455 0.00 0.00 0.00 2.69
2229 3050 3.193479 GGGACTTAAAGTGGGCATTTGAG 59.807 47.826 0.00 0.00 31.53 3.02
2230 3051 4.079253 GGACTTAAAGTGGGCATTTGAGA 58.921 43.478 7.52 0.00 30.26 3.27
2231 3052 4.082733 GGACTTAAAGTGGGCATTTGAGAC 60.083 45.833 7.52 2.89 30.26 3.36
2232 3053 4.729868 ACTTAAAGTGGGCATTTGAGACT 58.270 39.130 7.52 0.00 30.26 3.24
2233 3054 5.140454 ACTTAAAGTGGGCATTTGAGACTT 58.860 37.500 7.52 0.00 30.26 3.01
2234 3055 6.303839 ACTTAAAGTGGGCATTTGAGACTTA 58.696 36.000 7.52 0.00 30.26 2.24
2235 3056 6.948309 ACTTAAAGTGGGCATTTGAGACTTAT 59.052 34.615 7.52 0.00 30.26 1.73
2236 3057 5.649782 AAAGTGGGCATTTGAGACTTATG 57.350 39.130 0.00 0.00 0.00 1.90
2237 3058 4.574674 AGTGGGCATTTGAGACTTATGA 57.425 40.909 0.00 0.00 0.00 2.15
2238 3059 4.922206 AGTGGGCATTTGAGACTTATGAA 58.078 39.130 0.00 0.00 0.00 2.57
2239 3060 5.324409 AGTGGGCATTTGAGACTTATGAAA 58.676 37.500 0.00 0.00 0.00 2.69
2240 3061 5.954150 AGTGGGCATTTGAGACTTATGAAAT 59.046 36.000 0.00 0.00 0.00 2.17
2241 3062 7.118723 AGTGGGCATTTGAGACTTATGAAATA 58.881 34.615 0.00 0.00 0.00 1.40
2242 3063 7.615365 AGTGGGCATTTGAGACTTATGAAATAA 59.385 33.333 0.00 0.00 36.20 1.40
2268 3089 5.996271 TCTCAAGGAGAGTCTTATAGGGA 57.004 43.478 0.00 0.00 44.98 4.20
2269 3090 5.697067 TCTCAAGGAGAGTCTTATAGGGAC 58.303 45.833 0.00 0.00 44.98 4.46
2270 3091 5.433712 TCTCAAGGAGAGTCTTATAGGGACT 59.566 44.000 9.30 9.30 45.37 3.85
2271 3092 6.068735 TCTCAAGGAGAGTCTTATAGGGACTT 60.069 42.308 10.43 3.61 43.13 3.01
2272 3093 7.129038 TCTCAAGGAGAGTCTTATAGGGACTTA 59.871 40.741 10.43 0.00 43.13 2.24
2273 3094 7.827787 TCAAGGAGAGTCTTATAGGGACTTAT 58.172 38.462 10.43 4.90 43.13 1.73
2274 3095 8.956860 TCAAGGAGAGTCTTATAGGGACTTATA 58.043 37.037 10.43 0.00 43.13 0.98
2275 3096 9.238368 CAAGGAGAGTCTTATAGGGACTTATAG 57.762 40.741 10.43 0.00 43.13 1.31
2276 3097 8.528543 AGGAGAGTCTTATAGGGACTTATAGT 57.471 38.462 10.43 0.00 43.13 2.12
2277 3098 8.962205 AGGAGAGTCTTATAGGGACTTATAGTT 58.038 37.037 10.43 0.00 43.13 2.24
2278 3099 9.016438 GGAGAGTCTTATAGGGACTTATAGTTG 57.984 40.741 10.43 0.00 43.13 3.16
2279 3100 9.577222 GAGAGTCTTATAGGGACTTATAGTTGT 57.423 37.037 10.43 0.00 43.13 3.32
2290 3111 9.448587 AGGGACTTATAGTTGTAATATGGTCTT 57.551 33.333 0.00 0.00 27.25 3.01
2300 3121 9.448587 AGTTGTAATATGGTCTTATAGGGACTT 57.551 33.333 7.52 0.00 41.75 3.01
2319 3140 5.853572 ACTTATAAGTCCCAGGAACCAAA 57.146 39.130 12.50 0.00 32.86 3.28
2320 3141 5.567430 ACTTATAAGTCCCAGGAACCAAAC 58.433 41.667 12.50 0.00 32.86 2.93
2321 3142 5.073965 ACTTATAAGTCCCAGGAACCAAACA 59.926 40.000 12.50 0.00 32.86 2.83
2322 3143 2.364972 AAGTCCCAGGAACCAAACAG 57.635 50.000 0.00 0.00 0.00 3.16
2323 3144 0.478507 AGTCCCAGGAACCAAACAGG 59.521 55.000 0.00 0.00 45.67 4.00
2373 3194 5.801380 GTCCTAGGACTTATGAACCAAACA 58.199 41.667 31.12 0.00 41.57 2.83
2376 3197 4.034285 AGGACTTATGAACCAAACAGGG 57.966 45.455 0.00 0.00 43.89 4.45
2377 3198 2.492088 GGACTTATGAACCAAACAGGGC 59.508 50.000 0.00 0.00 43.89 5.19
2410 3231 1.069378 GACGCGAACCAGGTTAGTCG 61.069 60.000 15.93 19.86 0.00 4.18
2415 3236 1.741706 CGAACCAGGTTAGTCGAGCTA 59.258 52.381 4.25 0.00 0.00 3.32
2571 3877 2.292267 CTGTTGAACAAGTGGTGAGCT 58.708 47.619 0.00 0.00 0.00 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 3.305964 ACACATCGTACGACTTCAAGTG 58.694 45.455 22.14 21.29 0.00 3.16
13 14 3.126514 CCTGTCTACACATCGTACGACTT 59.873 47.826 22.14 7.43 33.22 3.01
23 24 3.884091 GACTCCGTATCCTGTCTACACAT 59.116 47.826 0.00 0.00 0.00 3.21
39 40 0.170561 CCTACTTGGACACGACTCCG 59.829 60.000 0.00 0.00 39.01 4.63
73 74 4.621769 ACCCCCGCTATATATAAGAAGCT 58.378 43.478 11.23 0.00 32.73 3.74
76 77 6.604795 GTGTCTACCCCCGCTATATATAAGAA 59.395 42.308 0.00 0.00 0.00 2.52
80 81 5.195940 GTGTGTCTACCCCCGCTATATATA 58.804 45.833 0.00 0.00 0.00 0.86
112 113 4.009675 CCCGTGCTATTATGTTGGCATAT 58.990 43.478 0.00 0.00 37.42 1.78
177 178 1.079405 CGTCACAATACCGCACCCT 60.079 57.895 0.00 0.00 0.00 4.34
314 315 2.450609 TAGAATAAATCCGAGGCGCC 57.549 50.000 21.89 21.89 0.00 6.53
337 338 8.183104 TCACTATGATGGAGGAGTATTACAAG 57.817 38.462 0.00 0.00 0.00 3.16
338 339 8.727100 ATCACTATGATGGAGGAGTATTACAA 57.273 34.615 0.00 0.00 35.43 2.41
341 342 8.588472 CACAATCACTATGATGGAGGAGTATTA 58.412 37.037 0.09 0.00 37.15 0.98
342 343 7.448420 CACAATCACTATGATGGAGGAGTATT 58.552 38.462 0.09 0.00 37.15 1.89
345 346 4.444022 GCACAATCACTATGATGGAGGAGT 60.444 45.833 0.09 0.00 37.15 3.85
346 347 4.063689 GCACAATCACTATGATGGAGGAG 58.936 47.826 0.09 0.00 37.15 3.69
348 349 3.144506 GGCACAATCACTATGATGGAGG 58.855 50.000 0.09 0.00 37.15 4.30
349 350 4.082665 AGGCACAATCACTATGATGGAG 57.917 45.455 0.09 0.00 37.15 3.86
350 351 4.454678 GAAGGCACAATCACTATGATGGA 58.545 43.478 0.09 0.00 37.15 3.41
352 353 3.873361 ACGAAGGCACAATCACTATGATG 59.127 43.478 0.00 0.00 37.15 3.07
354 355 3.261580 CACGAAGGCACAATCACTATGA 58.738 45.455 0.00 0.00 0.00 2.15
355 356 2.223112 GCACGAAGGCACAATCACTATG 60.223 50.000 0.00 0.00 0.00 2.23
356 357 2.009774 GCACGAAGGCACAATCACTAT 58.990 47.619 0.00 0.00 0.00 2.12
358 359 1.568612 CGCACGAAGGCACAATCACT 61.569 55.000 0.00 0.00 0.00 3.41
360 361 1.565156 GACGCACGAAGGCACAATCA 61.565 55.000 0.00 0.00 0.00 2.57
361 362 1.132640 GACGCACGAAGGCACAATC 59.867 57.895 0.00 0.00 0.00 2.67
362 363 2.325082 GGACGCACGAAGGCACAAT 61.325 57.895 0.00 0.00 0.00 2.71
368 369 1.289109 AAATCACGGACGCACGAAGG 61.289 55.000 6.34 0.00 37.61 3.46
369 370 0.511221 AAAATCACGGACGCACGAAG 59.489 50.000 6.34 0.00 37.61 3.79
370 371 0.509499 GAAAATCACGGACGCACGAA 59.491 50.000 6.34 0.00 37.61 3.85
371 372 0.319211 AGAAAATCACGGACGCACGA 60.319 50.000 6.34 0.00 37.61 4.35
372 373 0.511221 AAGAAAATCACGGACGCACG 59.489 50.000 0.00 0.00 40.31 5.34
373 374 1.136057 GGAAGAAAATCACGGACGCAC 60.136 52.381 0.00 0.00 0.00 5.34
374 375 1.153353 GGAAGAAAATCACGGACGCA 58.847 50.000 0.00 0.00 0.00 5.24
375 376 0.094730 CGGAAGAAAATCACGGACGC 59.905 55.000 0.00 0.00 0.00 5.19
376 377 1.425412 ACGGAAGAAAATCACGGACG 58.575 50.000 0.00 0.00 0.00 4.79
377 378 4.687483 TCTTTACGGAAGAAAATCACGGAC 59.313 41.667 1.53 0.00 41.34 4.79
378 379 4.885413 TCTTTACGGAAGAAAATCACGGA 58.115 39.130 1.53 0.00 41.34 4.69
379 380 5.796350 ATCTTTACGGAAGAAAATCACGG 57.204 39.130 7.45 0.00 46.90 4.94
380 381 7.801315 TGAAAATCTTTACGGAAGAAAATCACG 59.199 33.333 7.45 0.00 46.90 4.35
381 382 8.902735 GTGAAAATCTTTACGGAAGAAAATCAC 58.097 33.333 18.58 18.58 46.90 3.06
382 383 7.801315 CGTGAAAATCTTTACGGAAGAAAATCA 59.199 33.333 7.45 8.70 46.90 2.57
383 384 7.801783 ACGTGAAAATCTTTACGGAAGAAAATC 59.198 33.333 0.99 6.79 46.90 2.17
384 385 7.645402 ACGTGAAAATCTTTACGGAAGAAAAT 58.355 30.769 0.99 0.00 46.90 1.82
385 386 7.018635 ACGTGAAAATCTTTACGGAAGAAAA 57.981 32.000 0.99 0.00 46.90 2.29
386 387 6.607735 ACGTGAAAATCTTTACGGAAGAAA 57.392 33.333 0.99 0.00 46.90 2.52
387 388 7.712264 TTACGTGAAAATCTTTACGGAAGAA 57.288 32.000 0.00 0.00 46.90 2.52
388 389 7.712264 TTTACGTGAAAATCTTTACGGAAGA 57.288 32.000 0.00 6.05 45.03 2.87
389 390 8.770850 TTTTTACGTGAAAATCTTTACGGAAG 57.229 30.769 13.59 0.00 45.03 3.46
401 402 9.982291 GAGAGCATACATATTTTTACGTGAAAA 57.018 29.630 18.94 18.94 35.16 2.29
402 403 8.325282 CGAGAGCATACATATTTTTACGTGAAA 58.675 33.333 0.73 0.73 0.00 2.69
403 404 7.490079 ACGAGAGCATACATATTTTTACGTGAA 59.510 33.333 0.00 0.00 0.00 3.18
404 405 6.976349 ACGAGAGCATACATATTTTTACGTGA 59.024 34.615 0.00 0.00 0.00 4.35
405 406 7.057402 CACGAGAGCATACATATTTTTACGTG 58.943 38.462 0.00 0.00 38.63 4.49
406 407 6.755141 ACACGAGAGCATACATATTTTTACGT 59.245 34.615 0.00 0.00 0.00 3.57
407 408 7.161829 ACACGAGAGCATACATATTTTTACG 57.838 36.000 0.00 0.00 0.00 3.18
408 409 8.354011 AGACACGAGAGCATACATATTTTTAC 57.646 34.615 0.00 0.00 0.00 2.01
409 410 7.378728 CGAGACACGAGAGCATACATATTTTTA 59.621 37.037 0.00 0.00 45.77 1.52
410 411 6.199154 CGAGACACGAGAGCATACATATTTTT 59.801 38.462 0.00 0.00 45.77 1.94
411 412 5.687730 CGAGACACGAGAGCATACATATTTT 59.312 40.000 0.00 0.00 45.77 1.82
412 413 5.215903 CGAGACACGAGAGCATACATATTT 58.784 41.667 0.00 0.00 45.77 1.40
413 414 4.276183 ACGAGACACGAGAGCATACATATT 59.724 41.667 0.00 0.00 45.77 1.28
414 415 3.815962 ACGAGACACGAGAGCATACATAT 59.184 43.478 0.00 0.00 45.77 1.78
415 416 3.203716 ACGAGACACGAGAGCATACATA 58.796 45.455 0.00 0.00 45.77 2.29
416 417 2.017782 ACGAGACACGAGAGCATACAT 58.982 47.619 0.00 0.00 45.77 2.29
417 418 1.450025 ACGAGACACGAGAGCATACA 58.550 50.000 0.00 0.00 45.77 2.29
418 419 2.546195 AACGAGACACGAGAGCATAC 57.454 50.000 0.00 0.00 45.77 2.39
419 420 4.575236 AGATAAACGAGACACGAGAGCATA 59.425 41.667 0.00 0.00 45.77 3.14
420 421 3.378742 AGATAAACGAGACACGAGAGCAT 59.621 43.478 0.00 0.00 45.77 3.79
421 422 2.747989 AGATAAACGAGACACGAGAGCA 59.252 45.455 0.00 0.00 45.77 4.26
422 423 3.356145 GAGATAAACGAGACACGAGAGC 58.644 50.000 0.00 0.00 45.77 4.09
423 424 3.062369 ACGAGATAAACGAGACACGAGAG 59.938 47.826 0.00 0.00 45.77 3.20
424 425 2.998670 ACGAGATAAACGAGACACGAGA 59.001 45.455 0.00 0.00 45.77 4.04
425 426 3.386613 ACGAGATAAACGAGACACGAG 57.613 47.619 0.00 0.00 45.77 4.18
426 427 3.818961 AACGAGATAAACGAGACACGA 57.181 42.857 0.00 0.00 45.77 4.35
428 429 8.893884 CAGATAATAACGAGATAAACGAGACAC 58.106 37.037 0.00 0.00 34.70 3.67
429 430 8.833493 TCAGATAATAACGAGATAAACGAGACA 58.167 33.333 0.00 0.00 34.70 3.41
430 431 9.105206 GTCAGATAATAACGAGATAAACGAGAC 57.895 37.037 0.00 0.00 34.70 3.36
431 432 8.833493 TGTCAGATAATAACGAGATAAACGAGA 58.167 33.333 0.00 0.00 34.70 4.04
432 433 9.613957 ATGTCAGATAATAACGAGATAAACGAG 57.386 33.333 0.00 0.00 34.70 4.18
433 434 9.394477 CATGTCAGATAATAACGAGATAAACGA 57.606 33.333 0.00 0.00 34.70 3.85
434 435 9.181805 ACATGTCAGATAATAACGAGATAAACG 57.818 33.333 0.00 0.00 0.00 3.60
436 437 8.978539 GCACATGTCAGATAATAACGAGATAAA 58.021 33.333 0.00 0.00 0.00 1.40
437 438 7.598869 GGCACATGTCAGATAATAACGAGATAA 59.401 37.037 0.00 0.00 0.00 1.75
438 439 7.039714 AGGCACATGTCAGATAATAACGAGATA 60.040 37.037 0.00 0.00 0.00 1.98
439 440 5.928839 GGCACATGTCAGATAATAACGAGAT 59.071 40.000 0.00 0.00 0.00 2.75
440 441 5.069119 AGGCACATGTCAGATAATAACGAGA 59.931 40.000 0.00 0.00 0.00 4.04
441 442 5.292765 AGGCACATGTCAGATAATAACGAG 58.707 41.667 0.00 0.00 0.00 4.18
442 443 5.276461 AGGCACATGTCAGATAATAACGA 57.724 39.130 0.00 0.00 0.00 3.85
443 444 4.449068 GGAGGCACATGTCAGATAATAACG 59.551 45.833 0.00 0.00 0.00 3.18
444 445 4.449068 CGGAGGCACATGTCAGATAATAAC 59.551 45.833 0.00 0.00 0.00 1.89
445 446 4.631131 CGGAGGCACATGTCAGATAATAA 58.369 43.478 0.00 0.00 0.00 1.40
446 447 3.554960 GCGGAGGCACATGTCAGATAATA 60.555 47.826 0.00 0.00 39.62 0.98
447 448 2.808202 GCGGAGGCACATGTCAGATAAT 60.808 50.000 0.00 0.00 39.62 1.28
448 449 1.473257 GCGGAGGCACATGTCAGATAA 60.473 52.381 0.00 0.00 39.62 1.75
449 450 0.104855 GCGGAGGCACATGTCAGATA 59.895 55.000 0.00 0.00 39.62 1.98
450 451 1.153289 GCGGAGGCACATGTCAGAT 60.153 57.895 0.00 0.00 39.62 2.90
451 452 2.265739 GCGGAGGCACATGTCAGA 59.734 61.111 0.00 0.00 39.62 3.27
510 511 9.458374 GAAACAGAAATTCTTAATCGGTTTTCA 57.542 29.630 7.85 0.00 40.08 2.69
557 558 1.069227 GCGGTGTAGGCAAAGAAACAG 60.069 52.381 0.00 0.00 0.00 3.16
559 560 1.235724 AGCGGTGTAGGCAAAGAAAC 58.764 50.000 0.00 0.00 0.00 2.78
687 689 3.007614 GGGACACGTATATAGGTTGCCAT 59.992 47.826 18.16 1.49 0.00 4.40
691 693 3.893200 TCTGGGGACACGTATATAGGTTG 59.107 47.826 5.34 4.85 35.60 3.77
758 760 0.111061 TCTTTCAGGTGTGCATGCCT 59.889 50.000 16.68 1.12 35.04 4.75
795 804 3.310774 CCATCATTCCTGTAGTGCTTTCG 59.689 47.826 0.00 0.00 0.00 3.46
805 814 6.006275 ACTTATTACTGCCATCATTCCTGT 57.994 37.500 0.00 0.00 0.00 4.00
809 818 5.120830 CGGCTACTTATTACTGCCATCATTC 59.879 44.000 0.00 0.00 43.38 2.67
852 862 0.179045 GTGGGAATGTGGGATCCTCG 60.179 60.000 12.58 0.00 35.95 4.63
1111 1130 0.680280 TCGAGGGAGAAGAAGGTCCG 60.680 60.000 0.00 0.00 33.13 4.79
1199 1218 1.743252 GCCTGCAGCAGACTGTACC 60.743 63.158 24.90 0.00 46.30 3.34
1544 1980 4.094212 CGTTGAGCCGTTTCTAGTACTAC 58.906 47.826 0.00 0.00 0.00 2.73
1561 1997 5.948162 ACTTTCTATCCTAGTACCACGTTGA 59.052 40.000 0.00 0.00 0.00 3.18
1647 2083 4.655762 AAAGATTCACCGATCGATCTCA 57.344 40.909 22.43 2.97 0.00 3.27
1698 2134 2.428890 GGATCGATGTCTTCAGTCCAGT 59.571 50.000 0.54 0.00 0.00 4.00
1842 2278 1.285078 GTGCTCTACCAAAAGGGGGAT 59.715 52.381 0.00 0.00 42.91 3.85
1843 2279 0.696501 GTGCTCTACCAAAAGGGGGA 59.303 55.000 0.00 0.00 42.91 4.81
2085 2906 1.345741 GCCAGTATCCTAGCATGCTCA 59.654 52.381 26.57 10.11 0.00 4.26
2098 2919 3.584848 CCTTAGCCTTATCCTGCCAGTAT 59.415 47.826 0.00 0.00 0.00 2.12
2103 2924 0.402121 CCCCTTAGCCTTATCCTGCC 59.598 60.000 0.00 0.00 0.00 4.85
2114 2935 1.616865 GGAAACAAACACCCCCTTAGC 59.383 52.381 0.00 0.00 0.00 3.09
2115 2936 2.890945 CTGGAAACAAACACCCCCTTAG 59.109 50.000 0.00 0.00 42.06 2.18
2116 2937 2.425102 CCTGGAAACAAACACCCCCTTA 60.425 50.000 0.00 0.00 42.06 2.69
2117 2938 1.691163 CCTGGAAACAAACACCCCCTT 60.691 52.381 0.00 0.00 42.06 3.95
2118 2939 0.105709 CCTGGAAACAAACACCCCCT 60.106 55.000 0.00 0.00 42.06 4.79
2119 2940 1.118965 CCCTGGAAACAAACACCCCC 61.119 60.000 0.00 0.00 42.06 5.40
2121 2942 1.037493 GTCCCTGGAAACAAACACCC 58.963 55.000 0.00 0.00 42.06 4.61
2125 2946 4.587262 ACCAATAAGTCCCTGGAAACAAAC 59.413 41.667 0.00 0.00 42.06 2.93
2126 2947 4.810345 ACCAATAAGTCCCTGGAAACAAA 58.190 39.130 0.00 0.00 42.06 2.83
2127 2948 4.463050 ACCAATAAGTCCCTGGAAACAA 57.537 40.909 0.00 0.00 42.06 2.83
2128 2949 4.463050 AACCAATAAGTCCCTGGAAACA 57.537 40.909 0.00 0.00 39.59 2.83
2129 2950 5.417894 CCTAAACCAATAAGTCCCTGGAAAC 59.582 44.000 0.00 0.00 34.16 2.78
2130 2951 5.517655 CCCTAAACCAATAAGTCCCTGGAAA 60.518 44.000 0.00 0.00 34.16 3.13
2131 2952 4.017867 CCCTAAACCAATAAGTCCCTGGAA 60.018 45.833 0.00 0.00 34.16 3.53
2132 2953 3.526019 CCCTAAACCAATAAGTCCCTGGA 59.474 47.826 0.00 0.00 34.16 3.86
2133 2954 3.526019 TCCCTAAACCAATAAGTCCCTGG 59.474 47.826 0.00 0.00 36.24 4.45
2134 2955 4.227527 AGTCCCTAAACCAATAAGTCCCTG 59.772 45.833 0.00 0.00 0.00 4.45
2135 2956 4.445564 AGTCCCTAAACCAATAAGTCCCT 58.554 43.478 0.00 0.00 0.00 4.20
2136 2957 4.857130 AGTCCCTAAACCAATAAGTCCC 57.143 45.455 0.00 0.00 0.00 4.46
2137 2958 5.812286 TCAAGTCCCTAAACCAATAAGTCC 58.188 41.667 0.00 0.00 0.00 3.85
2138 2959 7.754851 TTTCAAGTCCCTAAACCAATAAGTC 57.245 36.000 0.00 0.00 0.00 3.01
2139 2960 8.541899 TTTTTCAAGTCCCTAAACCAATAAGT 57.458 30.769 0.00 0.00 0.00 2.24
2163 2984 9.182642 TGATTTAGATGGGACTTATAGGGATTT 57.817 33.333 0.00 0.00 0.00 2.17
2165 2986 8.757307 TTGATTTAGATGGGACTTATAGGGAT 57.243 34.615 0.00 0.00 0.00 3.85
2166 2987 8.437575 GTTTGATTTAGATGGGACTTATAGGGA 58.562 37.037 0.00 0.00 0.00 4.20
2168 2989 9.277783 CTGTTTGATTTAGATGGGACTTATAGG 57.722 37.037 0.00 0.00 0.00 2.57
2171 2992 9.401058 CTTCTGTTTGATTTAGATGGGACTTAT 57.599 33.333 0.00 0.00 0.00 1.73
2172 2993 7.829211 CCTTCTGTTTGATTTAGATGGGACTTA 59.171 37.037 0.00 0.00 34.09 2.24
2173 2994 6.660949 CCTTCTGTTTGATTTAGATGGGACTT 59.339 38.462 0.00 0.00 34.09 3.01
2174 2995 6.183347 CCTTCTGTTTGATTTAGATGGGACT 58.817 40.000 0.00 0.00 34.09 3.85
2175 2996 6.442513 CCTTCTGTTTGATTTAGATGGGAC 57.557 41.667 0.00 0.00 34.09 4.46
2177 2998 5.841957 CCCTTCTGTTTGATTTAGATGGG 57.158 43.478 9.24 9.24 44.49 4.00
2178 2999 7.651027 AATCCCTTCTGTTTGATTTAGATGG 57.349 36.000 0.00 0.00 36.22 3.51
2183 3004 9.640952 CCCTATAAATCCCTTCTGTTTGATTTA 57.359 33.333 0.00 0.00 41.37 1.40
2184 3005 8.343787 TCCCTATAAATCCCTTCTGTTTGATTT 58.656 33.333 0.00 0.00 39.83 2.17
2185 3006 7.780271 GTCCCTATAAATCCCTTCTGTTTGATT 59.220 37.037 0.00 0.00 0.00 2.57
2186 3007 7.129504 AGTCCCTATAAATCCCTTCTGTTTGAT 59.870 37.037 0.00 0.00 0.00 2.57
2187 3008 6.447084 AGTCCCTATAAATCCCTTCTGTTTGA 59.553 38.462 0.00 0.00 0.00 2.69
2190 3011 6.910259 AAGTCCCTATAAATCCCTTCTGTT 57.090 37.500 0.00 0.00 0.00 3.16
2191 3012 8.401955 TTTAAGTCCCTATAAATCCCTTCTGT 57.598 34.615 0.00 0.00 0.00 3.41
2192 3013 8.495260 ACTTTAAGTCCCTATAAATCCCTTCTG 58.505 37.037 0.00 0.00 0.00 3.02
2193 3014 8.495260 CACTTTAAGTCCCTATAAATCCCTTCT 58.505 37.037 0.00 0.00 0.00 2.85
2194 3015 7.720074 CCACTTTAAGTCCCTATAAATCCCTTC 59.280 40.741 0.00 0.00 0.00 3.46
2195 3016 7.367459 CCCACTTTAAGTCCCTATAAATCCCTT 60.367 40.741 0.00 0.00 0.00 3.95
2196 3017 6.102762 CCCACTTTAAGTCCCTATAAATCCCT 59.897 42.308 0.00 0.00 0.00 4.20
2197 3018 6.304624 CCCACTTTAAGTCCCTATAAATCCC 58.695 44.000 0.00 0.00 0.00 3.85
2198 3019 5.768662 GCCCACTTTAAGTCCCTATAAATCC 59.231 44.000 0.00 0.00 0.00 3.01
2199 3020 6.362248 TGCCCACTTTAAGTCCCTATAAATC 58.638 40.000 0.00 0.00 0.00 2.17
2200 3021 6.335781 TGCCCACTTTAAGTCCCTATAAAT 57.664 37.500 0.00 0.00 0.00 1.40
2201 3022 5.782677 TGCCCACTTTAAGTCCCTATAAA 57.217 39.130 0.00 0.00 0.00 1.40
2202 3023 5.987019 ATGCCCACTTTAAGTCCCTATAA 57.013 39.130 0.00 0.00 0.00 0.98
2203 3024 5.987019 AATGCCCACTTTAAGTCCCTATA 57.013 39.130 0.00 0.00 0.00 1.31
2204 3025 4.881157 AATGCCCACTTTAAGTCCCTAT 57.119 40.909 0.00 0.00 0.00 2.57
2205 3026 4.043561 TCAAATGCCCACTTTAAGTCCCTA 59.956 41.667 0.00 0.00 0.00 3.53
2206 3027 3.165071 CAAATGCCCACTTTAAGTCCCT 58.835 45.455 0.00 0.00 0.00 4.20
2207 3028 3.161866 TCAAATGCCCACTTTAAGTCCC 58.838 45.455 0.00 0.00 0.00 4.46
2208 3029 4.079253 TCTCAAATGCCCACTTTAAGTCC 58.921 43.478 0.00 0.00 0.00 3.85
2209 3030 4.762251 AGTCTCAAATGCCCACTTTAAGTC 59.238 41.667 0.00 0.00 0.00 3.01
2210 3031 4.729868 AGTCTCAAATGCCCACTTTAAGT 58.270 39.130 0.00 0.00 0.00 2.24
2211 3032 5.712152 AAGTCTCAAATGCCCACTTTAAG 57.288 39.130 0.00 0.00 0.00 1.85
2212 3033 6.945435 TCATAAGTCTCAAATGCCCACTTTAA 59.055 34.615 0.00 0.00 0.00 1.52
2213 3034 6.480763 TCATAAGTCTCAAATGCCCACTTTA 58.519 36.000 0.00 0.00 0.00 1.85
2214 3035 5.324409 TCATAAGTCTCAAATGCCCACTTT 58.676 37.500 0.00 0.00 0.00 2.66
2215 3036 4.922206 TCATAAGTCTCAAATGCCCACTT 58.078 39.130 0.00 0.00 0.00 3.16
2216 3037 4.574674 TCATAAGTCTCAAATGCCCACT 57.425 40.909 0.00 0.00 0.00 4.00
2217 3038 5.643379 TTTCATAAGTCTCAAATGCCCAC 57.357 39.130 0.00 0.00 0.00 4.61
2218 3039 7.833682 TCTTATTTCATAAGTCTCAAATGCCCA 59.166 33.333 3.93 0.00 42.21 5.36
2219 3040 8.131731 GTCTTATTTCATAAGTCTCAAATGCCC 58.868 37.037 3.93 0.00 42.21 5.36
2220 3041 8.897752 AGTCTTATTTCATAAGTCTCAAATGCC 58.102 33.333 3.93 0.00 42.21 4.40
2228 3049 9.261035 TCCTTGAGAGTCTTATTTCATAAGTCT 57.739 33.333 0.00 3.77 41.61 3.24
2229 3050 9.528018 CTCCTTGAGAGTCTTATTTCATAAGTC 57.472 37.037 0.00 0.00 37.60 3.01
2230 3051 9.261035 TCTCCTTGAGAGTCTTATTTCATAAGT 57.739 33.333 0.00 0.00 43.71 2.24
2246 3067 5.433712 AGTCCCTATAAGACTCTCCTTGAGA 59.566 44.000 0.00 0.00 45.39 3.27
2247 3068 5.701224 AGTCCCTATAAGACTCTCCTTGAG 58.299 45.833 0.24 0.00 40.61 3.02
2248 3069 5.735733 AGTCCCTATAAGACTCTCCTTGA 57.264 43.478 0.24 0.00 40.61 3.02
2249 3070 9.238368 CTATAAGTCCCTATAAGACTCTCCTTG 57.762 40.741 5.74 0.00 43.77 3.61
2250 3071 8.962205 ACTATAAGTCCCTATAAGACTCTCCTT 58.038 37.037 5.74 0.00 43.77 3.36
2251 3072 8.528543 ACTATAAGTCCCTATAAGACTCTCCT 57.471 38.462 5.74 0.00 43.77 3.69
2252 3073 9.016438 CAACTATAAGTCCCTATAAGACTCTCC 57.984 40.741 5.74 0.00 43.77 3.71
2253 3074 9.577222 ACAACTATAAGTCCCTATAAGACTCTC 57.423 37.037 5.74 0.00 43.77 3.20
2264 3085 9.448587 AAGACCATATTACAACTATAAGTCCCT 57.551 33.333 0.00 0.00 0.00 4.20
2274 3095 9.448587 AAGTCCCTATAAGACCATATTACAACT 57.551 33.333 0.09 0.00 34.67 3.16
2297 3118 5.073965 TGTTTGGTTCCTGGGACTTATAAGT 59.926 40.000 18.05 18.05 43.16 2.24
2298 3119 5.566469 TGTTTGGTTCCTGGGACTTATAAG 58.434 41.667 11.05 11.05 0.00 1.73
2299 3120 5.515886 CCTGTTTGGTTCCTGGGACTTATAA 60.516 44.000 4.84 0.00 0.00 0.98
2300 3121 4.018779 CCTGTTTGGTTCCTGGGACTTATA 60.019 45.833 4.84 0.00 0.00 0.98
2301 3122 3.245264 CCTGTTTGGTTCCTGGGACTTAT 60.245 47.826 4.84 0.00 0.00 1.73
2302 3123 2.107552 CCTGTTTGGTTCCTGGGACTTA 59.892 50.000 4.84 0.00 0.00 2.24
2303 3124 1.133482 CCTGTTTGGTTCCTGGGACTT 60.133 52.381 4.84 0.00 0.00 3.01
2304 3125 0.478507 CCTGTTTGGTTCCTGGGACT 59.521 55.000 4.84 0.00 0.00 3.85
2305 3126 3.036431 CCTGTTTGGTTCCTGGGAC 57.964 57.895 0.00 0.00 0.00 4.46
2310 3131 8.222637 AACTTATAAGTTACCTGTTTGGTTCCT 58.777 33.333 25.85 0.00 46.75 3.36
2311 3132 8.294577 CAACTTATAAGTTACCTGTTTGGTTCC 58.705 37.037 26.38 0.00 46.50 3.62
2312 3133 8.294577 CCAACTTATAAGTTACCTGTTTGGTTC 58.705 37.037 26.38 0.00 46.50 3.62
2313 3134 7.231925 CCCAACTTATAAGTTACCTGTTTGGTT 59.768 37.037 26.38 1.63 46.50 3.67
2314 3135 6.717997 CCCAACTTATAAGTTACCTGTTTGGT 59.282 38.462 26.38 1.83 46.89 3.67
2315 3136 6.943718 TCCCAACTTATAAGTTACCTGTTTGG 59.056 38.462 26.38 21.02 46.89 3.28
2316 3137 7.664318 AGTCCCAACTTATAAGTTACCTGTTTG 59.336 37.037 26.38 14.50 46.89 2.93
2317 3138 7.752638 AGTCCCAACTTATAAGTTACCTGTTT 58.247 34.615 26.38 9.79 46.89 2.83
2318 3139 7.325725 AGTCCCAACTTATAAGTTACCTGTT 57.674 36.000 26.38 11.12 46.89 3.16
2319 3140 6.947376 AGTCCCAACTTATAAGTTACCTGT 57.053 37.500 26.38 11.73 46.89 4.00
2320 3141 9.729281 TTTTAGTCCCAACTTATAAGTTACCTG 57.271 33.333 26.38 16.69 46.89 4.00
2350 3171 5.801380 TGTTTGGTTCATAAGTCCTAGGAC 58.199 41.667 31.29 31.29 44.86 3.85
2351 3172 5.045869 CCTGTTTGGTTCATAAGTCCTAGGA 60.046 44.000 7.62 7.62 0.00 2.94
2352 3173 5.186198 CCTGTTTGGTTCATAAGTCCTAGG 58.814 45.833 0.82 0.82 0.00 3.02
2353 3174 5.186198 CCCTGTTTGGTTCATAAGTCCTAG 58.814 45.833 0.00 0.00 0.00 3.02
2354 3175 4.566907 GCCCTGTTTGGTTCATAAGTCCTA 60.567 45.833 0.00 0.00 0.00 2.94
2355 3176 3.814316 GCCCTGTTTGGTTCATAAGTCCT 60.814 47.826 0.00 0.00 0.00 3.85
2356 3177 2.492088 GCCCTGTTTGGTTCATAAGTCC 59.508 50.000 0.00 0.00 0.00 3.85
2357 3178 2.492088 GGCCCTGTTTGGTTCATAAGTC 59.508 50.000 0.00 0.00 0.00 3.01
2358 3179 2.110011 AGGCCCTGTTTGGTTCATAAGT 59.890 45.455 0.00 0.00 0.00 2.24
2359 3180 2.807676 AGGCCCTGTTTGGTTCATAAG 58.192 47.619 0.00 0.00 0.00 1.73
2360 3181 2.990740 AGGCCCTGTTTGGTTCATAA 57.009 45.000 0.00 0.00 0.00 1.90
2361 3182 3.332485 ACTTAGGCCCTGTTTGGTTCATA 59.668 43.478 0.00 0.00 0.00 2.15
2362 3183 2.110011 ACTTAGGCCCTGTTTGGTTCAT 59.890 45.455 0.00 0.00 0.00 2.57
2363 3184 1.497286 ACTTAGGCCCTGTTTGGTTCA 59.503 47.619 0.00 0.00 0.00 3.18
2364 3185 2.160205 GACTTAGGCCCTGTTTGGTTC 58.840 52.381 0.00 0.00 0.00 3.62
2365 3186 1.203013 GGACTTAGGCCCTGTTTGGTT 60.203 52.381 0.00 0.00 0.00 3.67
2366 3187 0.404426 GGACTTAGGCCCTGTTTGGT 59.596 55.000 0.00 0.00 0.00 3.67
2367 3188 0.698818 AGGACTTAGGCCCTGTTTGG 59.301 55.000 0.00 0.00 0.00 3.28
2368 3189 2.162681 CAAGGACTTAGGCCCTGTTTG 58.837 52.381 0.00 0.00 32.12 2.93
2369 3190 2.062636 TCAAGGACTTAGGCCCTGTTT 58.937 47.619 0.00 0.00 32.12 2.83
2370 3191 1.742308 TCAAGGACTTAGGCCCTGTT 58.258 50.000 0.00 0.00 32.12 3.16
2371 3192 1.561542 CATCAAGGACTTAGGCCCTGT 59.438 52.381 0.00 0.00 32.12 4.00
2372 3193 1.839994 TCATCAAGGACTTAGGCCCTG 59.160 52.381 0.00 0.00 32.12 4.45
2373 3194 1.840635 GTCATCAAGGACTTAGGCCCT 59.159 52.381 0.00 0.00 34.92 5.19
2376 3197 1.291132 GCGTCATCAAGGACTTAGGC 58.709 55.000 0.00 0.00 35.63 3.93
2377 3198 1.134367 TCGCGTCATCAAGGACTTAGG 59.866 52.381 5.77 0.00 35.63 2.69
2410 3231 0.105778 GATGGCCTCACACCTAGCTC 59.894 60.000 3.32 0.00 0.00 4.09
2415 3236 0.904865 TCTTCGATGGCCTCACACCT 60.905 55.000 3.32 0.00 0.00 4.00
2474 3295 2.128035 GCCTTAGGTCGATCGTCATTG 58.872 52.381 15.94 4.13 0.00 2.82
2476 3297 0.674534 GGCCTTAGGTCGATCGTCAT 59.325 55.000 15.94 10.05 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.