Multiple sequence alignment - TraesCS5D01G113000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G113000 chr5D 100.000 4493 0 0 354 4846 129861971 129857479 0.000000e+00 8298.0
1 TraesCS5D01G113000 chr5D 100.000 3756 0 0 5223 8978 129857102 129853347 0.000000e+00 6937.0
2 TraesCS5D01G113000 chr5D 96.112 2006 46 8 2808 4789 509411244 509413241 0.000000e+00 3243.0
3 TraesCS5D01G113000 chr5D 100.000 140 0 0 1 140 129862324 129862185 8.940000e-65 259.0
4 TraesCS5D01G113000 chr5D 81.116 233 42 2 1107 1338 539070320 539070551 1.540000e-42 185.0
5 TraesCS5D01G113000 chr5D 79.600 250 43 6 1107 1352 539075120 539075365 1.200000e-38 172.0
6 TraesCS5D01G113000 chr5D 82.051 195 33 2 1145 1338 539055758 539055951 2.010000e-36 165.0
7 TraesCS5D01G113000 chr5D 98.387 62 1 0 889 950 129860041 129860102 9.530000e-20 110.0
8 TraesCS5D01G113000 chr5D 98.387 62 1 0 2223 2284 129861375 129861436 9.530000e-20 110.0
9 TraesCS5D01G113000 chr5D 93.878 49 3 0 2729 2777 518875159 518875207 3.480000e-09 75.0
10 TraesCS5D01G113000 chr5A 92.197 2704 138 33 6100 8757 145662584 145659908 0.000000e+00 3757.0
11 TraesCS5D01G113000 chr5A 95.268 1099 42 9 954 2047 145667262 145666169 0.000000e+00 1733.0
12 TraesCS5D01G113000 chr5A 81.861 1891 234 74 2820 4638 134338039 134336186 0.000000e+00 1491.0
13 TraesCS5D01G113000 chr5A 95.913 367 14 1 2221 2587 145665815 145665450 2.160000e-165 593.0
14 TraesCS5D01G113000 chr5A 94.800 250 11 1 2558 2805 145662907 145662658 1.090000e-103 388.0
15 TraesCS5D01G113000 chr5A 85.621 153 17 5 367 517 295055121 295055270 1.210000e-33 156.0
16 TraesCS5D01G113000 chr5A 89.916 119 12 0 2 120 145676579 145676461 4.340000e-33 154.0
17 TraesCS5D01G113000 chr5A 86.923 130 6 5 2046 2175 145665932 145665814 1.570000e-27 135.0
18 TraesCS5D01G113000 chr5A 94.667 75 4 0 5922 5996 145662659 145662585 5.700000e-22 117.0
19 TraesCS5D01G113000 chr5A 96.774 62 2 0 889 950 145665752 145665813 4.430000e-18 104.0
20 TraesCS5D01G113000 chr5A 95.082 61 3 0 383 443 145676404 145676344 7.420000e-16 97.1
21 TraesCS5D01G113000 chr4D 95.712 2052 51 7 2808 4826 117866367 117864320 0.000000e+00 3267.0
22 TraesCS5D01G113000 chr4D 95.954 2002 54 7 2808 4789 53131041 53133035 0.000000e+00 3223.0
23 TraesCS5D01G113000 chr4D 95.965 1958 48 10 2808 4741 53122417 53124367 0.000000e+00 3149.0
24 TraesCS5D01G113000 chr4D 88.904 712 43 25 5238 5922 376956691 376955989 0.000000e+00 845.0
25 TraesCS5D01G113000 chr4D 88.922 677 48 25 5265 5922 29286992 29287660 0.000000e+00 809.0
26 TraesCS5D01G113000 chr4D 89.906 426 32 9 2809 3228 396392195 396392615 1.030000e-148 538.0
27 TraesCS5D01G113000 chr4D 80.580 345 48 10 358 687 75510212 75510552 1.940000e-61 248.0
28 TraesCS5D01G113000 chr4D 93.478 46 3 0 2733 2778 129775351 129775306 1.620000e-07 69.4
29 TraesCS5D01G113000 chr4D 91.111 45 4 0 2733 2777 366328189 366328233 2.710000e-05 62.1
30 TraesCS5D01G113000 chr3D 96.213 2007 44 9 2806 4789 255464688 255466685 0.000000e+00 3256.0
31 TraesCS5D01G113000 chr3D 94.906 2081 54 9 2808 4846 255473262 255475332 0.000000e+00 3208.0
32 TraesCS5D01G113000 chr3D 94.671 2064 73 15 2808 4846 448683932 448681881 0.000000e+00 3168.0
33 TraesCS5D01G113000 chr3D 93.847 2064 67 27 2808 4846 184253837 184255865 0.000000e+00 3053.0
34 TraesCS5D01G113000 chr3D 93.030 1937 99 21 2808 4727 302277111 302275194 0.000000e+00 2796.0
35 TraesCS5D01G113000 chr3D 92.975 726 22 11 5225 5924 448681886 448681164 0.000000e+00 1031.0
36 TraesCS5D01G113000 chr3D 91.474 692 38 11 5247 5921 369320057 369319370 0.000000e+00 931.0
37 TraesCS5D01G113000 chr3D 86.207 58 6 2 2719 2775 95983491 95983547 2.710000e-05 62.1
38 TraesCS5D01G113000 chr1D 95.862 2006 53 6 2805 4789 325915355 325917351 0.000000e+00 3217.0
39 TraesCS5D01G113000 chr1D 94.925 2069 66 15 2808 4846 195099477 195097418 0.000000e+00 3203.0
40 TraesCS5D01G113000 chr1D 94.788 2072 68 17 2808 4846 359457932 359459996 0.000000e+00 3192.0
41 TraesCS5D01G113000 chr1D 95.895 1973 53 6 2808 4759 325923164 325925129 0.000000e+00 3169.0
42 TraesCS5D01G113000 chr1D 95.020 2008 58 15 2808 4795 145890509 145888524 0.000000e+00 3116.0
43 TraesCS5D01G113000 chr1D 95.339 1974 58 17 2808 4759 195107799 195105838 0.000000e+00 3105.0
44 TraesCS5D01G113000 chr1D 91.505 671 32 18 5271 5922 179486953 179486289 0.000000e+00 900.0
45 TraesCS5D01G113000 chr1D 89.769 694 51 18 5239 5920 233959780 233960465 0.000000e+00 870.0
46 TraesCS5D01G113000 chr1D 88.312 693 50 22 5247 5920 146888586 146887906 0.000000e+00 802.0
47 TraesCS5D01G113000 chr1D 88.235 51 5 1 2725 2775 414486380 414486331 9.730000e-05 60.2
48 TraesCS5D01G113000 chr1D 96.970 33 1 0 2727 2759 458871765 458871733 1.000000e-03 56.5
49 TraesCS5D01G113000 chr1D 85.185 54 6 2 2723 2775 138635318 138635370 5.000000e-03 54.7
50 TraesCS5D01G113000 chr1D 88.636 44 4 1 2732 2775 409797844 409797802 1.600000e-02 52.8
51 TraesCS5D01G113000 chr1D 88.636 44 4 1 2732 2775 482278727 482278685 1.600000e-02 52.8
52 TraesCS5D01G113000 chr2D 95.758 2004 52 13 2809 4789 451252005 451253998 0.000000e+00 3199.0
53 TraesCS5D01G113000 chr2D 93.505 2063 78 27 2808 4846 327156765 327158795 0.000000e+00 3016.0
54 TraesCS5D01G113000 chr2D 92.649 721 26 13 5225 5921 252276659 252275942 0.000000e+00 1013.0
55 TraesCS5D01G113000 chr2D 91.944 720 20 14 5225 5920 327158790 327159495 0.000000e+00 974.0
56 TraesCS5D01G113000 chr2D 87.960 706 51 28 5232 5920 84694150 84693462 0.000000e+00 802.0
57 TraesCS5D01G113000 chr2D 86.547 223 25 4 1123 1341 32031305 32031084 3.240000e-59 241.0
58 TraesCS5D01G113000 chr2D 76.946 334 48 14 375 686 603697444 603697770 7.210000e-36 163.0
59 TraesCS5D01G113000 chr2D 88.421 95 8 3 1662 1755 87416039 87416131 2.650000e-20 111.0
60 TraesCS5D01G113000 chr6D 94.773 2066 74 16 2809 4846 348895332 348897391 0.000000e+00 3186.0
61 TraesCS5D01G113000 chr6D 94.436 2067 77 17 2808 4846 163668466 163670522 0.000000e+00 3145.0
62 TraesCS5D01G113000 chr6D 95.109 2024 48 13 2808 4789 398149984 398147970 0.000000e+00 3142.0
63 TraesCS5D01G113000 chr6D 96.402 1862 40 5 2809 4643 327993447 327995308 0.000000e+00 3042.0
64 TraesCS5D01G113000 chr6D 92.337 2075 101 31 2808 4846 231157976 231160028 0.000000e+00 2898.0
65 TraesCS5D01G113000 chr6D 93.802 1936 74 21 2810 4715 315239234 315237315 0.000000e+00 2868.0
66 TraesCS5D01G113000 chr6D 94.763 1814 69 9 2809 4599 243021988 243023798 0.000000e+00 2800.0
67 TraesCS5D01G113000 chr6D 91.646 2011 106 37 2808 4781 199969971 199971956 0.000000e+00 2726.0
68 TraesCS5D01G113000 chr6D 93.060 562 16 5 2807 3346 434687201 434687761 0.000000e+00 800.0
69 TraesCS5D01G113000 chr6D 96.875 32 0 1 2728 2759 428472764 428472734 1.600000e-02 52.8
70 TraesCS5D01G113000 chrUn 93.270 1902 88 18 2808 4683 70667027 70665140 0.000000e+00 2767.0
71 TraesCS5D01G113000 chrUn 91.026 2017 124 35 2808 4791 109494611 109492619 0.000000e+00 2669.0
72 TraesCS5D01G113000 chrUn 92.619 1707 89 22 2808 4486 109532729 109531032 0.000000e+00 2420.0
73 TraesCS5D01G113000 chrUn 92.164 1608 95 12 2808 4390 109486420 109484819 0.000000e+00 2242.0
74 TraesCS5D01G113000 chrUn 91.186 1214 72 21 2809 3994 115529744 115528538 0.000000e+00 1616.0
75 TraesCS5D01G113000 chrUn 92.537 938 44 9 2815 3731 360932598 360933530 0.000000e+00 1321.0
76 TraesCS5D01G113000 chrUn 92.040 892 47 7 2808 3676 283820985 283821875 0.000000e+00 1232.0
77 TraesCS5D01G113000 chrUn 93.164 746 26 6 2808 3531 288712963 288712221 0.000000e+00 1072.0
78 TraesCS5D01G113000 chrUn 91.944 782 36 8 2808 3566 110746162 110745385 0.000000e+00 1070.0
79 TraesCS5D01G113000 chrUn 93.478 46 3 0 2733 2778 319831931 319831976 1.620000e-07 69.4
80 TraesCS5D01G113000 chrUn 93.478 46 3 0 2733 2778 332180538 332180493 1.620000e-07 69.4
81 TraesCS5D01G113000 chrUn 93.478 46 3 0 2733 2778 380953770 380953725 1.620000e-07 69.4
82 TraesCS5D01G113000 chrUn 100.000 32 0 0 2728 2759 102510723 102510754 9.730000e-05 60.2
83 TraesCS5D01G113000 chrUn 100.000 28 0 0 2732 2759 2602289 2602262 1.600000e-02 52.8
84 TraesCS5D01G113000 chrUn 100.000 28 0 0 2732 2759 4608448 4608475 1.600000e-02 52.8
85 TraesCS5D01G113000 chrUn 100.000 28 0 0 2732 2759 17409869 17409842 1.600000e-02 52.8
86 TraesCS5D01G113000 chrUn 100.000 28 0 0 2732 2759 48920968 48920941 1.600000e-02 52.8
87 TraesCS5D01G113000 chrUn 100.000 28 0 0 2732 2759 56815708 56815735 1.600000e-02 52.8
88 TraesCS5D01G113000 chrUn 88.636 44 4 1 2732 2775 64391044 64391002 1.600000e-02 52.8
89 TraesCS5D01G113000 chr5B 93.659 1861 64 23 954 2806 141896655 141894841 0.000000e+00 2734.0
90 TraesCS5D01G113000 chr5B 94.591 1405 55 9 6862 8247 141893912 141892510 0.000000e+00 2154.0
91 TraesCS5D01G113000 chr5B 90.012 831 53 15 5919 6725 141894844 141894020 0.000000e+00 1048.0
92 TraesCS5D01G113000 chr5B 82.953 745 68 24 8257 8978 141892302 141891594 1.280000e-172 617.0
93 TraesCS5D01G113000 chr5B 79.749 479 73 19 8345 8816 333563957 333563496 8.690000e-85 326.0
94 TraesCS5D01G113000 chr5B 82.403 233 39 2 1107 1338 680752113 680752344 1.530000e-47 202.0
95 TraesCS5D01G113000 chr5B 79.736 227 46 0 1112 1338 680746087 680746313 2.010000e-36 165.0
96 TraesCS5D01G113000 chr5B 78.970 233 44 4 1107 1338 680767294 680767522 4.340000e-33 154.0
97 TraesCS5D01G113000 chr5B 77.778 234 48 4 1107 1338 680683834 680684065 3.380000e-29 141.0
98 TraesCS5D01G113000 chr5B 100.000 28 0 0 1641 1668 141895873 141895846 1.600000e-02 52.8
99 TraesCS5D01G113000 chr7D 92.818 724 22 10 5225 5920 481380733 481381454 0.000000e+00 1022.0
100 TraesCS5D01G113000 chr7D 90.141 639 47 15 5290 5922 387056429 387057057 0.000000e+00 817.0
101 TraesCS5D01G113000 chr7D 75.620 242 47 11 456 689 49753436 49753673 9.530000e-20 110.0
102 TraesCS5D01G113000 chr7D 82.301 113 17 3 1637 1748 612895884 612895774 2.670000e-15 95.3
103 TraesCS5D01G113000 chr7D 97.727 44 1 0 2727 2770 533909247 533909204 9.670000e-10 76.8
104 TraesCS5D01G113000 chr3A 83.878 949 104 33 2808 3731 113781041 113781965 0.000000e+00 859.0
105 TraesCS5D01G113000 chr2B 86.574 216 29 0 1123 1338 52601111 52600896 1.160000e-58 239.0
106 TraesCS5D01G113000 chr2B 84.685 222 27 4 1123 1338 52348292 52348512 1.960000e-51 215.0
107 TraesCS5D01G113000 chr2B 83.333 120 16 4 1637 1755 200860983 200860867 3.430000e-19 108.0
108 TraesCS5D01G113000 chr2A 84.018 219 35 0 1123 1341 34093136 34092918 2.540000e-50 211.0
109 TraesCS5D01G113000 chr4A 81.897 232 40 2 1108 1338 629424355 629424125 2.560000e-45 195.0
110 TraesCS5D01G113000 chr4A 80.833 240 42 4 1107 1344 629436289 629436052 1.540000e-42 185.0
111 TraesCS5D01G113000 chr4B 86.232 138 14 5 383 516 571467518 571467382 2.610000e-30 145.0
112 TraesCS5D01G113000 chr7B 83.168 101 13 4 1652 1750 184489398 184489300 1.240000e-13 89.8
113 TraesCS5D01G113000 chr7A 86.842 76 3 7 2727 2797 613636629 613636556 2.690000e-10 78.7
114 TraesCS5D01G113000 chr1B 92.308 52 4 0 1684 1735 8714698 8714749 3.480000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G113000 chr5D 129853347 129862324 8977 True 5164.666667 8298 100.000000 1 8978 3 chr5D.!!$R1 8977
1 TraesCS5D01G113000 chr5D 509411244 509413241 1997 False 3243.000000 3243 96.112000 2808 4789 1 chr5D.!!$F1 1981
2 TraesCS5D01G113000 chr5A 134336186 134338039 1853 True 1491.000000 1491 81.861000 2820 4638 1 chr5A.!!$R1 1818
3 TraesCS5D01G113000 chr5A 145659908 145667262 7354 True 1120.500000 3757 93.294667 954 8757 6 chr5A.!!$R2 7803
4 TraesCS5D01G113000 chr4D 117864320 117866367 2047 True 3267.000000 3267 95.712000 2808 4826 1 chr4D.!!$R1 2018
5 TraesCS5D01G113000 chr4D 53131041 53133035 1994 False 3223.000000 3223 95.954000 2808 4789 1 chr4D.!!$F3 1981
6 TraesCS5D01G113000 chr4D 53122417 53124367 1950 False 3149.000000 3149 95.965000 2808 4741 1 chr4D.!!$F2 1933
7 TraesCS5D01G113000 chr4D 376955989 376956691 702 True 845.000000 845 88.904000 5238 5922 1 chr4D.!!$R3 684
8 TraesCS5D01G113000 chr4D 29286992 29287660 668 False 809.000000 809 88.922000 5265 5922 1 chr4D.!!$F1 657
9 TraesCS5D01G113000 chr3D 255464688 255466685 1997 False 3256.000000 3256 96.213000 2806 4789 1 chr3D.!!$F3 1983
10 TraesCS5D01G113000 chr3D 255473262 255475332 2070 False 3208.000000 3208 94.906000 2808 4846 1 chr3D.!!$F4 2038
11 TraesCS5D01G113000 chr3D 184253837 184255865 2028 False 3053.000000 3053 93.847000 2808 4846 1 chr3D.!!$F2 2038
12 TraesCS5D01G113000 chr3D 302275194 302277111 1917 True 2796.000000 2796 93.030000 2808 4727 1 chr3D.!!$R1 1919
13 TraesCS5D01G113000 chr3D 448681164 448683932 2768 True 2099.500000 3168 93.823000 2808 5924 2 chr3D.!!$R3 3116
14 TraesCS5D01G113000 chr3D 369319370 369320057 687 True 931.000000 931 91.474000 5247 5921 1 chr3D.!!$R2 674
15 TraesCS5D01G113000 chr1D 325915355 325917351 1996 False 3217.000000 3217 95.862000 2805 4789 1 chr1D.!!$F3 1984
16 TraesCS5D01G113000 chr1D 195097418 195099477 2059 True 3203.000000 3203 94.925000 2808 4846 1 chr1D.!!$R4 2038
17 TraesCS5D01G113000 chr1D 359457932 359459996 2064 False 3192.000000 3192 94.788000 2808 4846 1 chr1D.!!$F5 2038
18 TraesCS5D01G113000 chr1D 325923164 325925129 1965 False 3169.000000 3169 95.895000 2808 4759 1 chr1D.!!$F4 1951
19 TraesCS5D01G113000 chr1D 145888524 145890509 1985 True 3116.000000 3116 95.020000 2808 4795 1 chr1D.!!$R1 1987
20 TraesCS5D01G113000 chr1D 195105838 195107799 1961 True 3105.000000 3105 95.339000 2808 4759 1 chr1D.!!$R5 1951
21 TraesCS5D01G113000 chr1D 179486289 179486953 664 True 900.000000 900 91.505000 5271 5922 1 chr1D.!!$R3 651
22 TraesCS5D01G113000 chr1D 233959780 233960465 685 False 870.000000 870 89.769000 5239 5920 1 chr1D.!!$F2 681
23 TraesCS5D01G113000 chr1D 146887906 146888586 680 True 802.000000 802 88.312000 5247 5920 1 chr1D.!!$R2 673
24 TraesCS5D01G113000 chr2D 451252005 451253998 1993 False 3199.000000 3199 95.758000 2809 4789 1 chr2D.!!$F2 1980
25 TraesCS5D01G113000 chr2D 327156765 327159495 2730 False 1995.000000 3016 92.724500 2808 5920 2 chr2D.!!$F4 3112
26 TraesCS5D01G113000 chr2D 252275942 252276659 717 True 1013.000000 1013 92.649000 5225 5921 1 chr2D.!!$R3 696
27 TraesCS5D01G113000 chr2D 84693462 84694150 688 True 802.000000 802 87.960000 5232 5920 1 chr2D.!!$R2 688
28 TraesCS5D01G113000 chr6D 348895332 348897391 2059 False 3186.000000 3186 94.773000 2809 4846 1 chr6D.!!$F6 2037
29 TraesCS5D01G113000 chr6D 163668466 163670522 2056 False 3145.000000 3145 94.436000 2808 4846 1 chr6D.!!$F1 2038
30 TraesCS5D01G113000 chr6D 398147970 398149984 2014 True 3142.000000 3142 95.109000 2808 4789 1 chr6D.!!$R2 1981
31 TraesCS5D01G113000 chr6D 327993447 327995308 1861 False 3042.000000 3042 96.402000 2809 4643 1 chr6D.!!$F5 1834
32 TraesCS5D01G113000 chr6D 231157976 231160028 2052 False 2898.000000 2898 92.337000 2808 4846 1 chr6D.!!$F3 2038
33 TraesCS5D01G113000 chr6D 315237315 315239234 1919 True 2868.000000 2868 93.802000 2810 4715 1 chr6D.!!$R1 1905
34 TraesCS5D01G113000 chr6D 243021988 243023798 1810 False 2800.000000 2800 94.763000 2809 4599 1 chr6D.!!$F4 1790
35 TraesCS5D01G113000 chr6D 199969971 199971956 1985 False 2726.000000 2726 91.646000 2808 4781 1 chr6D.!!$F2 1973
36 TraesCS5D01G113000 chr6D 434687201 434687761 560 False 800.000000 800 93.060000 2807 3346 1 chr6D.!!$F7 539
37 TraesCS5D01G113000 chrUn 70665140 70667027 1887 True 2767.000000 2767 93.270000 2808 4683 1 chrUn.!!$R5 1875
38 TraesCS5D01G113000 chrUn 109492619 109494611 1992 True 2669.000000 2669 91.026000 2808 4791 1 chrUn.!!$R7 1983
39 TraesCS5D01G113000 chrUn 109531032 109532729 1697 True 2420.000000 2420 92.619000 2808 4486 1 chrUn.!!$R8 1678
40 TraesCS5D01G113000 chrUn 109484819 109486420 1601 True 2242.000000 2242 92.164000 2808 4390 1 chrUn.!!$R6 1582
41 TraesCS5D01G113000 chrUn 115528538 115529744 1206 True 1616.000000 1616 91.186000 2809 3994 1 chrUn.!!$R10 1185
42 TraesCS5D01G113000 chrUn 360932598 360933530 932 False 1321.000000 1321 92.537000 2815 3731 1 chrUn.!!$F6 916
43 TraesCS5D01G113000 chrUn 283820985 283821875 890 False 1232.000000 1232 92.040000 2808 3676 1 chrUn.!!$F4 868
44 TraesCS5D01G113000 chrUn 288712221 288712963 742 True 1072.000000 1072 93.164000 2808 3531 1 chrUn.!!$R11 723
45 TraesCS5D01G113000 chrUn 110745385 110746162 777 True 1070.000000 1070 91.944000 2808 3566 1 chrUn.!!$R9 758
46 TraesCS5D01G113000 chr5B 141891594 141896655 5061 True 1321.160000 2734 92.243000 954 8978 5 chr5B.!!$R2 8024
47 TraesCS5D01G113000 chr7D 481380733 481381454 721 False 1022.000000 1022 92.818000 5225 5920 1 chr7D.!!$F3 695
48 TraesCS5D01G113000 chr7D 387056429 387057057 628 False 817.000000 817 90.141000 5290 5922 1 chr7D.!!$F2 632
49 TraesCS5D01G113000 chr3A 113781041 113781965 924 False 859.000000 859 83.878000 2808 3731 1 chr3A.!!$F1 923

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
134 135 0.032515 TAAGGGGCCTCTCATGACGA 60.033 55.000 5.00 0.0 0.00 4.20 F
1009 1010 0.032615 TGGCCTCCTTCTCTCTCCTC 60.033 60.000 3.32 0.0 0.00 3.71 F
1960 1967 1.497286 GGGCCATTATCCAAGTACCCA 59.503 52.381 4.39 0.0 36.07 4.51 F
2075 2322 1.110518 GGTCCTTTTTGGGCACGGAA 61.111 55.000 0.00 0.0 43.75 4.30 F
2114 2361 1.226974 CTCCTACGTGCACGGGATG 60.227 63.158 39.21 24.6 44.95 3.51 F
3124 5976 1.610522 GGTCAGCACATGGAATATGCC 59.389 52.381 0.00 0.0 40.33 4.40 F
3613 6494 3.823873 CCCTACATCTGCTAGTCTACCTG 59.176 52.174 0.00 0.0 0.00 4.00 F
4021 6946 6.194235 TGAGGGTTGGTCTAATGCAATAAAT 58.806 36.000 0.00 0.0 0.00 1.40 F
5842 8981 5.586643 AGTTGCTTAGGATTTTCGAGGATTC 59.413 40.000 0.00 0.0 0.00 2.52 F
6401 9558 0.456221 CGTAGCTGATCGAGGTGGTT 59.544 55.000 0.00 0.0 33.31 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1771 1776 0.676736 GGCAGGGGATAGAAGAGACG 59.323 60.000 0.00 0.00 0.00 4.18 R
2075 2322 0.744414 CGTCCGCTCATCCCACAATT 60.744 55.000 0.00 0.00 0.00 2.32 R
2805 5628 2.447443 TGAGGTCTGATCGCTACAACT 58.553 47.619 0.00 0.00 0.00 3.16 R
3613 6494 2.565841 AGGTTGTGTGAGCTCTTGAAC 58.434 47.619 16.19 11.71 0.00 3.18 R
3852 6770 2.730382 TGCTAGTAGACGTGGATTGGA 58.270 47.619 0.00 0.00 0.00 3.53 R
4021 6946 9.434275 TTGATCATACCTCTTTTACTATCCAGA 57.566 33.333 0.00 0.00 0.00 3.86 R
5743 8878 8.722480 TTCTTATCAAGTGATGAAACGATGAT 57.278 30.769 4.00 0.00 42.54 2.45 R
6023 9163 1.835494 TCACTCCTTCCGTCTAGGTG 58.165 55.000 0.00 0.00 41.99 4.00 R
6800 9965 0.542232 ACCCACTCTGGAGTTAGCGT 60.542 55.000 0.00 0.00 40.96 5.07 R
8029 11235 0.107214 CTATGAATGCCCACACCCGT 60.107 55.000 0.00 0.00 0.00 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.762745 TGAACTAGTTTCAAGACGGGC 58.237 47.619 10.02 0.00 41.51 6.13
32 33 1.725164 GAACTAGTTTCAAGACGGGCG 59.275 52.381 10.02 0.00 33.94 6.13
33 34 0.963962 ACTAGTTTCAAGACGGGCGA 59.036 50.000 0.00 0.00 0.00 5.54
34 35 1.336609 ACTAGTTTCAAGACGGGCGAC 60.337 52.381 0.00 0.00 0.00 5.19
35 36 0.963962 TAGTTTCAAGACGGGCGACT 59.036 50.000 0.00 0.00 0.00 4.18
36 37 0.600255 AGTTTCAAGACGGGCGACTG 60.600 55.000 0.00 0.00 44.60 3.51
37 38 0.599204 GTTTCAAGACGGGCGACTGA 60.599 55.000 2.64 0.00 41.09 3.41
38 39 0.105224 TTTCAAGACGGGCGACTGAA 59.895 50.000 2.64 0.00 41.09 3.02
39 40 0.319555 TTCAAGACGGGCGACTGAAG 60.320 55.000 2.64 0.00 41.09 3.02
40 41 1.176619 TCAAGACGGGCGACTGAAGA 61.177 55.000 2.64 0.00 41.09 2.87
41 42 1.009389 CAAGACGGGCGACTGAAGAC 61.009 60.000 2.64 0.00 41.09 3.01
42 43 2.473664 AAGACGGGCGACTGAAGACG 62.474 60.000 2.64 0.00 41.09 4.18
43 44 2.974489 GACGGGCGACTGAAGACGA 61.974 63.158 2.64 0.00 41.09 4.20
44 45 2.267681 GACGGGCGACTGAAGACGAT 62.268 60.000 2.64 0.00 41.09 3.73
45 46 1.874019 CGGGCGACTGAAGACGATG 60.874 63.158 6.38 0.00 39.98 3.84
46 47 1.511305 GGGCGACTGAAGACGATGA 59.489 57.895 6.38 0.00 35.37 2.92
47 48 0.108804 GGGCGACTGAAGACGATGAA 60.109 55.000 6.38 0.00 35.37 2.57
48 49 1.272781 GGCGACTGAAGACGATGAAG 58.727 55.000 6.38 0.00 35.37 3.02
49 50 0.642800 GCGACTGAAGACGATGAAGC 59.357 55.000 6.38 0.00 35.37 3.86
50 51 1.982612 CGACTGAAGACGATGAAGCA 58.017 50.000 0.00 0.00 35.37 3.91
51 52 1.916651 CGACTGAAGACGATGAAGCAG 59.083 52.381 0.00 0.00 35.37 4.24
52 53 1.658095 GACTGAAGACGATGAAGCAGC 59.342 52.381 0.00 0.00 0.00 5.25
53 54 1.274728 ACTGAAGACGATGAAGCAGCT 59.725 47.619 0.00 0.00 0.00 4.24
54 55 1.925847 CTGAAGACGATGAAGCAGCTC 59.074 52.381 0.00 0.00 0.00 4.09
55 56 0.919981 GAAGACGATGAAGCAGCTCG 59.080 55.000 0.00 0.00 38.34 5.03
56 57 0.459237 AAGACGATGAAGCAGCTCGG 60.459 55.000 0.00 0.00 36.74 4.63
57 58 1.139734 GACGATGAAGCAGCTCGGA 59.860 57.895 0.00 0.00 36.74 4.55
58 59 0.458543 GACGATGAAGCAGCTCGGAA 60.459 55.000 0.00 0.00 36.74 4.30
59 60 0.459237 ACGATGAAGCAGCTCGGAAG 60.459 55.000 0.00 0.00 36.74 3.46
60 61 1.150567 CGATGAAGCAGCTCGGAAGG 61.151 60.000 0.00 0.00 0.00 3.46
61 62 0.176680 GATGAAGCAGCTCGGAAGGA 59.823 55.000 0.00 0.00 0.00 3.36
62 63 0.107945 ATGAAGCAGCTCGGAAGGAC 60.108 55.000 0.00 0.00 0.00 3.85
63 64 1.448717 GAAGCAGCTCGGAAGGACC 60.449 63.158 0.00 0.00 0.00 4.46
73 74 1.153349 GGAAGGACCGAGGTGATGC 60.153 63.158 0.00 0.00 0.00 3.91
74 75 1.153349 GAAGGACCGAGGTGATGCC 60.153 63.158 0.00 0.00 37.58 4.40
75 76 2.907897 GAAGGACCGAGGTGATGCCG 62.908 65.000 0.00 0.00 43.70 5.69
77 78 4.148825 GACCGAGGTGATGCCGCT 62.149 66.667 0.00 0.00 43.70 5.52
78 79 3.665675 GACCGAGGTGATGCCGCTT 62.666 63.158 0.00 0.00 43.70 4.68
79 80 3.197790 CCGAGGTGATGCCGCTTG 61.198 66.667 0.00 0.00 43.70 4.01
80 81 2.125552 CGAGGTGATGCCGCTTGA 60.126 61.111 0.00 0.00 43.70 3.02
81 82 1.741401 CGAGGTGATGCCGCTTGAA 60.741 57.895 0.00 0.00 43.70 2.69
82 83 1.699656 CGAGGTGATGCCGCTTGAAG 61.700 60.000 0.00 0.00 43.70 3.02
83 84 0.391661 GAGGTGATGCCGCTTGAAGA 60.392 55.000 0.00 0.00 43.70 2.87
84 85 0.674895 AGGTGATGCCGCTTGAAGAC 60.675 55.000 0.00 0.00 43.70 3.01
85 86 0.674895 GGTGATGCCGCTTGAAGACT 60.675 55.000 0.00 0.00 0.00 3.24
86 87 0.445436 GTGATGCCGCTTGAAGACTG 59.555 55.000 0.00 0.00 0.00 3.51
87 88 0.674581 TGATGCCGCTTGAAGACTGG 60.675 55.000 0.00 0.00 0.00 4.00
88 89 0.674895 GATGCCGCTTGAAGACTGGT 60.675 55.000 0.00 0.00 0.00 4.00
89 90 0.250901 ATGCCGCTTGAAGACTGGTT 60.251 50.000 0.00 0.00 0.00 3.67
90 91 0.884704 TGCCGCTTGAAGACTGGTTC 60.885 55.000 0.00 0.00 0.00 3.62
91 92 0.884704 GCCGCTTGAAGACTGGTTCA 60.885 55.000 0.00 0.00 34.56 3.18
92 93 1.813513 CCGCTTGAAGACTGGTTCAT 58.186 50.000 0.00 0.00 36.34 2.57
93 94 2.935238 GCCGCTTGAAGACTGGTTCATA 60.935 50.000 0.00 0.00 36.34 2.15
94 95 2.932614 CCGCTTGAAGACTGGTTCATAG 59.067 50.000 0.00 0.00 36.34 2.23
95 96 2.932614 CGCTTGAAGACTGGTTCATAGG 59.067 50.000 0.00 0.00 36.34 2.57
96 97 3.617531 CGCTTGAAGACTGGTTCATAGGT 60.618 47.826 0.00 0.00 36.34 3.08
97 98 4.327680 GCTTGAAGACTGGTTCATAGGTT 58.672 43.478 0.00 0.00 36.34 3.50
98 99 5.488341 GCTTGAAGACTGGTTCATAGGTTA 58.512 41.667 0.00 0.00 36.34 2.85
99 100 5.351740 GCTTGAAGACTGGTTCATAGGTTAC 59.648 44.000 0.00 0.00 36.34 2.50
100 101 6.681729 TTGAAGACTGGTTCATAGGTTACT 57.318 37.500 0.00 0.00 36.34 2.24
101 102 7.578955 GCTTGAAGACTGGTTCATAGGTTACTA 60.579 40.741 0.00 0.00 36.34 1.82
102 103 7.786046 TGAAGACTGGTTCATAGGTTACTAA 57.214 36.000 0.00 0.00 31.31 2.24
103 104 8.375493 TGAAGACTGGTTCATAGGTTACTAAT 57.625 34.615 0.00 0.00 31.31 1.73
104 105 8.258007 TGAAGACTGGTTCATAGGTTACTAATG 58.742 37.037 0.00 0.00 31.31 1.90
105 106 7.125792 AGACTGGTTCATAGGTTACTAATGG 57.874 40.000 0.00 0.00 31.86 3.16
106 107 6.672657 AGACTGGTTCATAGGTTACTAATGGT 59.327 38.462 0.00 0.00 31.86 3.55
107 108 6.650120 ACTGGTTCATAGGTTACTAATGGTG 58.350 40.000 0.00 0.00 31.86 4.17
108 109 6.214819 ACTGGTTCATAGGTTACTAATGGTGT 59.785 38.462 0.00 0.00 31.86 4.16
109 110 6.646267 TGGTTCATAGGTTACTAATGGTGTC 58.354 40.000 0.00 0.00 31.86 3.67
110 111 6.053650 GGTTCATAGGTTACTAATGGTGTCC 58.946 44.000 0.00 0.00 31.86 4.02
111 112 6.126854 GGTTCATAGGTTACTAATGGTGTCCT 60.127 42.308 0.00 0.00 36.71 3.85
112 113 6.479972 TCATAGGTTACTAATGGTGTCCTG 57.520 41.667 5.25 0.00 35.35 3.86
113 114 5.365605 TCATAGGTTACTAATGGTGTCCTGG 59.634 44.000 5.25 0.00 35.35 4.45
114 115 2.238898 AGGTTACTAATGGTGTCCTGGC 59.761 50.000 0.00 0.00 33.57 4.85
115 116 2.238898 GGTTACTAATGGTGTCCTGGCT 59.761 50.000 0.00 0.00 0.00 4.75
116 117 3.453353 GGTTACTAATGGTGTCCTGGCTA 59.547 47.826 0.00 0.00 0.00 3.93
117 118 4.080751 GGTTACTAATGGTGTCCTGGCTAA 60.081 45.833 0.00 0.00 0.00 3.09
118 119 3.914426 ACTAATGGTGTCCTGGCTAAG 57.086 47.619 0.00 0.00 0.00 2.18
131 132 2.532854 GCTAAGGGGCCTCTCATGA 58.467 57.895 5.00 0.00 0.00 3.07
132 133 0.107643 GCTAAGGGGCCTCTCATGAC 59.892 60.000 5.00 0.00 0.00 3.06
133 134 0.390860 CTAAGGGGCCTCTCATGACG 59.609 60.000 5.00 0.00 0.00 4.35
134 135 0.032515 TAAGGGGCCTCTCATGACGA 60.033 55.000 5.00 0.00 0.00 4.20
135 136 1.333636 AAGGGGCCTCTCATGACGAG 61.334 60.000 5.00 12.59 43.80 4.18
136 137 2.060980 GGGGCCTCTCATGACGAGT 61.061 63.158 0.84 0.00 42.88 4.18
137 138 1.617947 GGGGCCTCTCATGACGAGTT 61.618 60.000 0.84 0.00 42.88 3.01
138 139 0.460987 GGGCCTCTCATGACGAGTTG 60.461 60.000 0.84 7.35 42.88 3.16
139 140 0.532573 GGCCTCTCATGACGAGTTGA 59.467 55.000 16.19 1.84 42.88 3.18
375 376 4.883083 GCCTATGGAGAAATACACGATGA 58.117 43.478 0.00 0.00 0.00 2.92
376 377 5.482908 GCCTATGGAGAAATACACGATGAT 58.517 41.667 0.00 0.00 0.00 2.45
377 378 5.934625 GCCTATGGAGAAATACACGATGATT 59.065 40.000 0.00 0.00 0.00 2.57
378 379 6.091441 GCCTATGGAGAAATACACGATGATTC 59.909 42.308 0.00 0.00 0.00 2.52
379 380 6.591834 CCTATGGAGAAATACACGATGATTCC 59.408 42.308 0.00 0.00 0.00 3.01
380 381 4.368315 TGGAGAAATACACGATGATTCCG 58.632 43.478 0.00 0.00 0.00 4.30
381 382 4.142026 TGGAGAAATACACGATGATTCCGT 60.142 41.667 0.00 0.00 41.36 4.69
382 383 5.068067 TGGAGAAATACACGATGATTCCGTA 59.932 40.000 0.00 0.00 38.29 4.02
383 384 5.981315 GGAGAAATACACGATGATTCCGTAA 59.019 40.000 0.00 0.00 38.29 3.18
384 385 6.144080 GGAGAAATACACGATGATTCCGTAAG 59.856 42.308 0.00 0.00 38.29 2.34
409 410 3.624900 TGACGTACAAGACAAGAAGACG 58.375 45.455 0.00 0.00 35.10 4.18
410 411 2.978489 GACGTACAAGACAAGAAGACGG 59.022 50.000 0.00 0.00 33.32 4.79
411 412 2.288030 ACGTACAAGACAAGAAGACGGG 60.288 50.000 0.00 0.00 33.32 5.28
412 413 2.685100 GTACAAGACAAGAAGACGGGG 58.315 52.381 0.00 0.00 0.00 5.73
413 414 1.129058 ACAAGACAAGAAGACGGGGT 58.871 50.000 0.00 0.00 0.00 4.95
414 415 1.070289 ACAAGACAAGAAGACGGGGTC 59.930 52.381 0.00 0.00 0.00 4.46
415 416 0.317479 AAGACAAGAAGACGGGGTCG 59.683 55.000 0.00 0.00 37.67 4.79
425 426 2.572284 CGGGGTCGTGGAGAGTTC 59.428 66.667 0.00 0.00 0.00 3.01
426 427 1.977544 CGGGGTCGTGGAGAGTTCT 60.978 63.158 0.00 0.00 0.00 3.01
427 428 0.679002 CGGGGTCGTGGAGAGTTCTA 60.679 60.000 0.00 0.00 0.00 2.10
428 429 0.816373 GGGGTCGTGGAGAGTTCTAC 59.184 60.000 0.00 0.00 0.00 2.59
429 430 0.816373 GGGTCGTGGAGAGTTCTACC 59.184 60.000 0.00 0.00 31.60 3.18
430 431 1.542492 GGTCGTGGAGAGTTCTACCA 58.458 55.000 0.00 0.00 31.60 3.25
436 437 4.722361 GTGGAGAGTTCTACCACCTTAG 57.278 50.000 14.59 0.00 45.53 2.18
437 438 4.342359 GTGGAGAGTTCTACCACCTTAGA 58.658 47.826 14.59 0.00 45.53 2.10
438 439 4.158209 GTGGAGAGTTCTACCACCTTAGAC 59.842 50.000 14.59 0.00 45.53 2.59
439 440 4.202641 TGGAGAGTTCTACCACCTTAGACA 60.203 45.833 0.00 0.00 0.00 3.41
440 441 4.957327 GGAGAGTTCTACCACCTTAGACAT 59.043 45.833 0.00 0.00 0.00 3.06
441 442 6.127793 GGAGAGTTCTACCACCTTAGACATA 58.872 44.000 0.00 0.00 0.00 2.29
442 443 6.263617 GGAGAGTTCTACCACCTTAGACATAG 59.736 46.154 0.00 0.00 0.00 2.23
443 444 5.595133 AGAGTTCTACCACCTTAGACATAGC 59.405 44.000 0.00 0.00 0.00 2.97
444 445 4.650131 AGTTCTACCACCTTAGACATAGCC 59.350 45.833 0.00 0.00 0.00 3.93
445 446 3.220110 TCTACCACCTTAGACATAGCCG 58.780 50.000 0.00 0.00 0.00 5.52
446 447 2.154567 ACCACCTTAGACATAGCCGA 57.845 50.000 0.00 0.00 0.00 5.54
447 448 1.755380 ACCACCTTAGACATAGCCGAC 59.245 52.381 0.00 0.00 0.00 4.79
448 449 1.068741 CCACCTTAGACATAGCCGACC 59.931 57.143 0.00 0.00 0.00 4.79
449 450 2.032620 CACCTTAGACATAGCCGACCT 58.967 52.381 0.00 0.00 0.00 3.85
450 451 3.220110 CACCTTAGACATAGCCGACCTA 58.780 50.000 0.00 0.00 0.00 3.08
451 452 3.253677 CACCTTAGACATAGCCGACCTAG 59.746 52.174 0.00 0.00 0.00 3.02
452 453 3.117587 ACCTTAGACATAGCCGACCTAGT 60.118 47.826 0.00 0.00 0.00 2.57
453 454 3.890147 CCTTAGACATAGCCGACCTAGTT 59.110 47.826 0.00 0.00 0.00 2.24
454 455 4.261656 CCTTAGACATAGCCGACCTAGTTG 60.262 50.000 0.00 0.00 0.00 3.16
455 456 2.736347 AGACATAGCCGACCTAGTTGT 58.264 47.619 0.00 0.00 0.00 3.32
456 457 2.427453 AGACATAGCCGACCTAGTTGTG 59.573 50.000 0.00 0.00 0.00 3.33
457 458 2.165845 GACATAGCCGACCTAGTTGTGT 59.834 50.000 0.00 0.00 0.00 3.72
458 459 3.359033 ACATAGCCGACCTAGTTGTGTA 58.641 45.455 0.00 0.00 0.00 2.90
459 460 3.765511 ACATAGCCGACCTAGTTGTGTAA 59.234 43.478 0.00 0.00 0.00 2.41
460 461 4.221262 ACATAGCCGACCTAGTTGTGTAAA 59.779 41.667 0.00 0.00 0.00 2.01
461 462 3.036075 AGCCGACCTAGTTGTGTAAAC 57.964 47.619 0.00 0.00 0.00 2.01
462 463 2.071540 GCCGACCTAGTTGTGTAAACC 58.928 52.381 0.00 0.00 0.00 3.27
463 464 2.691927 CCGACCTAGTTGTGTAAACCC 58.308 52.381 0.00 0.00 0.00 4.11
464 465 2.301009 CCGACCTAGTTGTGTAAACCCT 59.699 50.000 0.00 0.00 0.00 4.34
465 466 3.511146 CCGACCTAGTTGTGTAAACCCTA 59.489 47.826 0.00 0.00 0.00 3.53
466 467 4.021192 CCGACCTAGTTGTGTAAACCCTAA 60.021 45.833 0.00 0.00 0.00 2.69
467 468 5.166398 CGACCTAGTTGTGTAAACCCTAAG 58.834 45.833 0.00 0.00 0.00 2.18
468 469 5.047802 CGACCTAGTTGTGTAAACCCTAAGA 60.048 44.000 0.00 0.00 0.00 2.10
469 470 6.106648 ACCTAGTTGTGTAAACCCTAAGAC 57.893 41.667 0.00 0.00 0.00 3.01
470 471 5.012458 ACCTAGTTGTGTAAACCCTAAGACC 59.988 44.000 0.00 0.00 0.00 3.85
471 472 4.362470 AGTTGTGTAAACCCTAAGACCC 57.638 45.455 0.00 0.00 0.00 4.46
472 473 3.073503 AGTTGTGTAAACCCTAAGACCCC 59.926 47.826 0.00 0.00 0.00 4.95
473 474 2.994355 TGTGTAAACCCTAAGACCCCT 58.006 47.619 0.00 0.00 0.00 4.79
474 475 2.640826 TGTGTAAACCCTAAGACCCCTG 59.359 50.000 0.00 0.00 0.00 4.45
475 476 2.026542 GTGTAAACCCTAAGACCCCTGG 60.027 54.545 0.00 0.00 0.00 4.45
476 477 2.272698 GTAAACCCTAAGACCCCTGGT 58.727 52.381 0.00 0.00 39.44 4.00
477 478 2.747083 AAACCCTAAGACCCCTGGTA 57.253 50.000 0.00 0.00 35.25 3.25
478 479 2.984989 AACCCTAAGACCCCTGGTAT 57.015 50.000 0.00 0.00 35.25 2.73
479 480 2.191981 ACCCTAAGACCCCTGGTATG 57.808 55.000 0.00 0.00 35.25 2.39
480 481 0.765510 CCCTAAGACCCCTGGTATGC 59.234 60.000 0.00 0.00 35.25 3.14
481 482 1.695989 CCCTAAGACCCCTGGTATGCT 60.696 57.143 0.00 0.00 35.25 3.79
482 483 2.427297 CCCTAAGACCCCTGGTATGCTA 60.427 54.545 0.00 0.00 35.25 3.49
483 484 3.521727 CCTAAGACCCCTGGTATGCTAT 58.478 50.000 0.00 0.00 35.25 2.97
484 485 4.512207 CCCTAAGACCCCTGGTATGCTATA 60.512 50.000 0.00 0.00 35.25 1.31
485 486 5.281314 CCTAAGACCCCTGGTATGCTATAT 58.719 45.833 0.00 0.00 35.25 0.86
486 487 6.441222 CCTAAGACCCCTGGTATGCTATATA 58.559 44.000 0.00 0.00 35.25 0.86
487 488 6.901300 CCTAAGACCCCTGGTATGCTATATAA 59.099 42.308 0.00 0.00 35.25 0.98
488 489 6.875972 AAGACCCCTGGTATGCTATATAAG 57.124 41.667 0.00 0.00 35.25 1.73
489 490 4.717280 AGACCCCTGGTATGCTATATAAGC 59.283 45.833 0.00 0.00 43.97 3.09
490 491 4.699994 ACCCCTGGTATGCTATATAAGCT 58.300 43.478 0.00 0.00 42.89 3.74
491 492 4.471386 ACCCCTGGTATGCTATATAAGCTG 59.529 45.833 0.00 0.00 42.89 4.24
492 493 5.758123 ACCCCTGGTATGCTATATAAGCTGA 60.758 44.000 0.00 0.00 42.89 4.26
493 494 7.542518 ACCCCTGGTATGCTATATAAGCTGAG 61.543 46.154 0.00 0.00 42.89 3.35
501 502 0.977395 ATATAAGCTGAGGACCGGGC 59.023 55.000 6.32 0.21 0.00 6.13
502 503 0.105658 TATAAGCTGAGGACCGGGCT 60.106 55.000 7.57 0.00 36.53 5.19
503 504 1.403687 ATAAGCTGAGGACCGGGCTC 61.404 60.000 7.57 3.07 33.63 4.70
506 507 3.827898 CTGAGGACCGGGCTCGTC 61.828 72.222 7.57 7.59 33.95 4.20
509 510 3.711059 GAGGACCGGGCTCGTCCTA 62.711 68.421 24.11 0.00 42.50 2.94
510 511 3.217743 GGACCGGGCTCGTCCTAG 61.218 72.222 7.57 0.00 35.35 3.02
511 512 2.124403 GACCGGGCTCGTCCTAGA 60.124 66.667 4.71 0.00 34.39 2.43
512 513 1.751927 GACCGGGCTCGTCCTAGAA 60.752 63.158 4.71 0.00 34.39 2.10
513 514 2.002509 GACCGGGCTCGTCCTAGAAC 62.003 65.000 4.71 0.00 34.39 3.01
514 515 2.050350 CCGGGCTCGTCCTAGAACA 61.050 63.158 4.71 0.00 34.39 3.18
515 516 1.139095 CGGGCTCGTCCTAGAACAC 59.861 63.158 0.00 0.00 34.39 3.32
516 517 1.592400 CGGGCTCGTCCTAGAACACA 61.592 60.000 0.00 0.00 34.39 3.72
517 518 0.606604 GGGCTCGTCCTAGAACACAA 59.393 55.000 0.00 0.00 34.39 3.33
518 519 1.001633 GGGCTCGTCCTAGAACACAAA 59.998 52.381 0.00 0.00 34.39 2.83
519 520 2.354805 GGGCTCGTCCTAGAACACAAAT 60.355 50.000 0.00 0.00 34.39 2.32
520 521 2.930682 GGCTCGTCCTAGAACACAAATC 59.069 50.000 0.00 0.00 0.00 2.17
521 522 3.368531 GGCTCGTCCTAGAACACAAATCT 60.369 47.826 0.00 0.00 0.00 2.40
522 523 3.860536 GCTCGTCCTAGAACACAAATCTC 59.139 47.826 0.00 0.00 0.00 2.75
523 524 4.381079 GCTCGTCCTAGAACACAAATCTCT 60.381 45.833 0.00 0.00 0.00 3.10
524 525 5.715070 CTCGTCCTAGAACACAAATCTCTT 58.285 41.667 0.00 0.00 0.00 2.85
525 526 5.470368 TCGTCCTAGAACACAAATCTCTTG 58.530 41.667 0.00 0.00 0.00 3.02
526 527 4.627467 CGTCCTAGAACACAAATCTCTTGG 59.373 45.833 0.00 0.00 34.55 3.61
527 528 5.552178 GTCCTAGAACACAAATCTCTTGGT 58.448 41.667 0.00 0.00 34.76 3.67
528 529 6.571731 CGTCCTAGAACACAAATCTCTTGGTA 60.572 42.308 0.00 0.00 34.76 3.25
529 530 6.590677 GTCCTAGAACACAAATCTCTTGGTAC 59.409 42.308 0.00 0.00 34.76 3.34
530 531 6.497259 TCCTAGAACACAAATCTCTTGGTACT 59.503 38.462 0.00 0.00 34.76 2.73
531 532 7.016268 TCCTAGAACACAAATCTCTTGGTACTT 59.984 37.037 0.00 0.00 34.76 2.24
532 533 7.661847 CCTAGAACACAAATCTCTTGGTACTTT 59.338 37.037 0.00 0.00 30.35 2.66
533 534 7.264373 AGAACACAAATCTCTTGGTACTTTG 57.736 36.000 0.00 0.00 33.98 2.77
534 535 6.828785 AGAACACAAATCTCTTGGTACTTTGT 59.171 34.615 2.33 2.33 39.81 2.83
535 536 7.990886 AGAACACAAATCTCTTGGTACTTTGTA 59.009 33.333 6.77 0.00 37.80 2.41
536 537 7.492352 ACACAAATCTCTTGGTACTTTGTAC 57.508 36.000 6.77 0.00 37.80 2.90
537 538 7.280356 ACACAAATCTCTTGGTACTTTGTACT 58.720 34.615 6.77 0.00 37.80 2.73
538 539 7.773690 ACACAAATCTCTTGGTACTTTGTACTT 59.226 33.333 6.77 0.00 37.80 2.24
539 540 8.621286 CACAAATCTCTTGGTACTTTGTACTTT 58.379 33.333 6.77 0.00 37.80 2.66
540 541 8.621286 ACAAATCTCTTGGTACTTTGTACTTTG 58.379 33.333 5.60 9.88 38.04 2.77
541 542 8.621286 CAAATCTCTTGGTACTTTGTACTTTGT 58.379 33.333 7.64 0.00 0.00 2.83
542 543 9.841295 AAATCTCTTGGTACTTTGTACTTTGTA 57.159 29.630 7.64 0.00 0.00 2.41
545 546 9.918630 TCTCTTGGTACTTTGTACTTTGTATAC 57.081 33.333 7.64 0.00 0.00 1.47
546 547 9.701098 CTCTTGGTACTTTGTACTTTGTATACA 57.299 33.333 0.08 0.08 0.00 2.29
547 548 9.480053 TCTTGGTACTTTGTACTTTGTATACAC 57.520 33.333 4.68 0.00 32.30 2.90
548 549 8.606040 TTGGTACTTTGTACTTTGTATACACC 57.394 34.615 4.68 0.00 32.30 4.16
549 550 7.160726 TGGTACTTTGTACTTTGTATACACCC 58.839 38.462 4.68 0.00 32.30 4.61
550 551 6.595326 GGTACTTTGTACTTTGTATACACCCC 59.405 42.308 4.68 0.00 32.30 4.95
551 552 6.190346 ACTTTGTACTTTGTATACACCCCA 57.810 37.500 4.68 0.00 32.30 4.96
552 553 6.603224 ACTTTGTACTTTGTATACACCCCAA 58.397 36.000 4.68 2.27 32.30 4.12
553 554 6.487668 ACTTTGTACTTTGTATACACCCCAAC 59.512 38.462 4.68 1.76 32.30 3.77
554 555 5.563876 TGTACTTTGTATACACCCCAACA 57.436 39.130 4.68 4.33 0.00 3.33
555 556 5.307204 TGTACTTTGTATACACCCCAACAC 58.693 41.667 4.68 0.00 0.00 3.32
556 557 4.440826 ACTTTGTATACACCCCAACACA 57.559 40.909 4.68 0.00 0.00 3.72
557 558 4.794334 ACTTTGTATACACCCCAACACAA 58.206 39.130 4.68 0.00 0.00 3.33
558 559 5.390387 ACTTTGTATACACCCCAACACAAT 58.610 37.500 4.68 0.00 0.00 2.71
559 560 6.544650 ACTTTGTATACACCCCAACACAATA 58.455 36.000 4.68 0.00 0.00 1.90
560 561 7.005296 ACTTTGTATACACCCCAACACAATAA 58.995 34.615 4.68 0.00 0.00 1.40
561 562 7.506261 ACTTTGTATACACCCCAACACAATAAA 59.494 33.333 4.68 0.00 0.00 1.40
562 563 7.834881 TTGTATACACCCCAACACAATAAAA 57.165 32.000 4.68 0.00 0.00 1.52
563 564 7.455641 TGTATACACCCCAACACAATAAAAG 57.544 36.000 0.08 0.00 0.00 2.27
564 565 3.744238 ACACCCCAACACAATAAAAGC 57.256 42.857 0.00 0.00 0.00 3.51
565 566 3.034635 ACACCCCAACACAATAAAAGCA 58.965 40.909 0.00 0.00 0.00 3.91
566 567 3.452627 ACACCCCAACACAATAAAAGCAA 59.547 39.130 0.00 0.00 0.00 3.91
567 568 4.080863 ACACCCCAACACAATAAAAGCAAA 60.081 37.500 0.00 0.00 0.00 3.68
568 569 4.511082 CACCCCAACACAATAAAAGCAAAG 59.489 41.667 0.00 0.00 0.00 2.77
569 570 4.407296 ACCCCAACACAATAAAAGCAAAGA 59.593 37.500 0.00 0.00 0.00 2.52
570 571 4.990426 CCCCAACACAATAAAAGCAAAGAG 59.010 41.667 0.00 0.00 0.00 2.85
571 572 4.448732 CCCAACACAATAAAAGCAAAGAGC 59.551 41.667 0.00 0.00 46.19 4.09
581 582 2.859992 GCAAAGAGCAGGGTGTAGG 58.140 57.895 0.00 0.00 44.79 3.18
582 583 0.324943 GCAAAGAGCAGGGTGTAGGA 59.675 55.000 0.00 0.00 44.79 2.94
583 584 1.065126 GCAAAGAGCAGGGTGTAGGAT 60.065 52.381 0.00 0.00 44.79 3.24
584 585 2.911484 CAAAGAGCAGGGTGTAGGATC 58.089 52.381 0.00 0.00 0.00 3.36
585 586 2.503356 CAAAGAGCAGGGTGTAGGATCT 59.497 50.000 0.00 0.00 0.00 2.75
586 587 2.559381 AGAGCAGGGTGTAGGATCTT 57.441 50.000 0.00 0.00 0.00 2.40
587 588 2.393646 AGAGCAGGGTGTAGGATCTTC 58.606 52.381 0.00 0.00 0.00 2.87
588 589 2.111384 GAGCAGGGTGTAGGATCTTCA 58.889 52.381 0.00 0.00 0.00 3.02
589 590 1.834263 AGCAGGGTGTAGGATCTTCAC 59.166 52.381 0.00 0.08 32.31 3.18
590 591 1.134371 GCAGGGTGTAGGATCTTCACC 60.134 57.143 18.84 18.84 46.54 4.02
593 594 2.295253 GGTGTAGGATCTTCACCGTG 57.705 55.000 14.76 0.00 40.85 4.94
594 595 1.822990 GGTGTAGGATCTTCACCGTGA 59.177 52.381 14.76 0.00 40.85 4.35
595 596 2.159226 GGTGTAGGATCTTCACCGTGAG 60.159 54.545 14.76 0.00 40.85 3.51
596 597 2.753452 GTGTAGGATCTTCACCGTGAGA 59.247 50.000 0.64 2.64 0.00 3.27
597 598 3.017442 TGTAGGATCTTCACCGTGAGAG 58.983 50.000 0.64 3.33 0.00 3.20
598 599 0.820871 AGGATCTTCACCGTGAGAGC 59.179 55.000 0.64 4.80 0.00 4.09
599 600 0.179097 GGATCTTCACCGTGAGAGCC 60.179 60.000 15.09 15.09 0.00 4.70
600 601 0.179097 GATCTTCACCGTGAGAGCCC 60.179 60.000 0.64 0.00 0.00 5.19
601 602 1.949847 ATCTTCACCGTGAGAGCCCG 61.950 60.000 0.64 0.00 0.00 6.13
602 603 2.599281 TTCACCGTGAGAGCCCGA 60.599 61.111 0.64 0.00 0.00 5.14
603 604 2.154798 CTTCACCGTGAGAGCCCGAA 62.155 60.000 0.64 0.00 0.00 4.30
604 605 2.430382 TTCACCGTGAGAGCCCGAAC 62.430 60.000 0.64 0.00 0.00 3.95
605 606 3.692406 ACCGTGAGAGCCCGAACC 61.692 66.667 0.00 0.00 0.00 3.62
606 607 3.382832 CCGTGAGAGCCCGAACCT 61.383 66.667 0.00 0.00 0.00 3.50
607 608 2.125912 CGTGAGAGCCCGAACCTG 60.126 66.667 0.00 0.00 0.00 4.00
608 609 2.636412 CGTGAGAGCCCGAACCTGA 61.636 63.158 0.00 0.00 0.00 3.86
609 610 1.216710 GTGAGAGCCCGAACCTGAG 59.783 63.158 0.00 0.00 0.00 3.35
610 611 1.228894 TGAGAGCCCGAACCTGAGT 60.229 57.895 0.00 0.00 0.00 3.41
611 612 0.039180 TGAGAGCCCGAACCTGAGTA 59.961 55.000 0.00 0.00 0.00 2.59
612 613 1.183549 GAGAGCCCGAACCTGAGTAA 58.816 55.000 0.00 0.00 0.00 2.24
613 614 1.549170 GAGAGCCCGAACCTGAGTAAA 59.451 52.381 0.00 0.00 0.00 2.01
614 615 1.975680 AGAGCCCGAACCTGAGTAAAA 59.024 47.619 0.00 0.00 0.00 1.52
615 616 2.370849 AGAGCCCGAACCTGAGTAAAAA 59.629 45.455 0.00 0.00 0.00 1.94
616 617 2.483106 GAGCCCGAACCTGAGTAAAAAC 59.517 50.000 0.00 0.00 0.00 2.43
617 618 1.538512 GCCCGAACCTGAGTAAAAACC 59.461 52.381 0.00 0.00 0.00 3.27
618 619 2.156917 CCCGAACCTGAGTAAAAACCC 58.843 52.381 0.00 0.00 0.00 4.11
619 620 2.224695 CCCGAACCTGAGTAAAAACCCT 60.225 50.000 0.00 0.00 0.00 4.34
620 621 3.483421 CCGAACCTGAGTAAAAACCCTT 58.517 45.455 0.00 0.00 0.00 3.95
621 622 3.252458 CCGAACCTGAGTAAAAACCCTTG 59.748 47.826 0.00 0.00 0.00 3.61
622 623 3.881089 CGAACCTGAGTAAAAACCCTTGT 59.119 43.478 0.00 0.00 0.00 3.16
623 624 4.024302 CGAACCTGAGTAAAAACCCTTGTC 60.024 45.833 0.00 0.00 0.00 3.18
624 625 3.828921 ACCTGAGTAAAAACCCTTGTCC 58.171 45.455 0.00 0.00 0.00 4.02
625 626 3.462205 ACCTGAGTAAAAACCCTTGTCCT 59.538 43.478 0.00 0.00 0.00 3.85
626 627 4.079385 ACCTGAGTAAAAACCCTTGTCCTT 60.079 41.667 0.00 0.00 0.00 3.36
627 628 4.278419 CCTGAGTAAAAACCCTTGTCCTTG 59.722 45.833 0.00 0.00 0.00 3.61
628 629 4.862371 TGAGTAAAAACCCTTGTCCTTGT 58.138 39.130 0.00 0.00 0.00 3.16
629 630 5.265989 TGAGTAAAAACCCTTGTCCTTGTT 58.734 37.500 0.00 0.00 0.00 2.83
630 631 6.424883 TGAGTAAAAACCCTTGTCCTTGTTA 58.575 36.000 0.00 0.00 0.00 2.41
631 632 6.319405 TGAGTAAAAACCCTTGTCCTTGTTAC 59.681 38.462 0.00 0.00 0.00 2.50
632 633 5.595542 AGTAAAAACCCTTGTCCTTGTTACC 59.404 40.000 0.00 0.00 0.00 2.85
633 634 3.673543 AAACCCTTGTCCTTGTTACCA 57.326 42.857 0.00 0.00 0.00 3.25
634 635 3.895704 AACCCTTGTCCTTGTTACCAT 57.104 42.857 0.00 0.00 0.00 3.55
635 636 3.434940 ACCCTTGTCCTTGTTACCATC 57.565 47.619 0.00 0.00 0.00 3.51
636 637 2.041216 ACCCTTGTCCTTGTTACCATCC 59.959 50.000 0.00 0.00 0.00 3.51
637 638 2.620627 CCCTTGTCCTTGTTACCATCCC 60.621 54.545 0.00 0.00 0.00 3.85
638 639 2.356135 CTTGTCCTTGTTACCATCCCG 58.644 52.381 0.00 0.00 0.00 5.14
639 640 0.035820 TGTCCTTGTTACCATCCCGC 60.036 55.000 0.00 0.00 0.00 6.13
640 641 0.746923 GTCCTTGTTACCATCCCGCC 60.747 60.000 0.00 0.00 0.00 6.13
641 642 1.202099 TCCTTGTTACCATCCCGCCA 61.202 55.000 0.00 0.00 0.00 5.69
642 643 0.322997 CCTTGTTACCATCCCGCCAA 60.323 55.000 0.00 0.00 0.00 4.52
643 644 1.094785 CTTGTTACCATCCCGCCAAG 58.905 55.000 0.00 0.00 0.00 3.61
644 645 0.402504 TTGTTACCATCCCGCCAAGT 59.597 50.000 0.00 0.00 0.00 3.16
645 646 1.277579 TGTTACCATCCCGCCAAGTA 58.722 50.000 0.00 0.00 0.00 2.24
646 647 1.208535 TGTTACCATCCCGCCAAGTAG 59.791 52.381 0.00 0.00 0.00 2.57
647 648 0.179468 TTACCATCCCGCCAAGTAGC 59.821 55.000 0.00 0.00 0.00 3.58
648 649 1.692173 TACCATCCCGCCAAGTAGCC 61.692 60.000 0.00 0.00 0.00 3.93
649 650 2.746375 CCATCCCGCCAAGTAGCCT 61.746 63.158 0.00 0.00 0.00 4.58
650 651 1.407656 CCATCCCGCCAAGTAGCCTA 61.408 60.000 0.00 0.00 0.00 3.93
651 652 0.468226 CATCCCGCCAAGTAGCCTAA 59.532 55.000 0.00 0.00 0.00 2.69
652 653 1.072331 CATCCCGCCAAGTAGCCTAAT 59.928 52.381 0.00 0.00 0.00 1.73
653 654 1.209621 TCCCGCCAAGTAGCCTAATT 58.790 50.000 0.00 0.00 0.00 1.40
654 655 1.140252 TCCCGCCAAGTAGCCTAATTC 59.860 52.381 0.00 0.00 0.00 2.17
655 656 1.594331 CCGCCAAGTAGCCTAATTCC 58.406 55.000 0.00 0.00 0.00 3.01
656 657 1.217882 CGCCAAGTAGCCTAATTCCG 58.782 55.000 0.00 0.00 0.00 4.30
657 658 1.202486 CGCCAAGTAGCCTAATTCCGA 60.202 52.381 0.00 0.00 0.00 4.55
658 659 2.548067 CGCCAAGTAGCCTAATTCCGAT 60.548 50.000 0.00 0.00 0.00 4.18
659 660 3.305813 CGCCAAGTAGCCTAATTCCGATA 60.306 47.826 0.00 0.00 0.00 2.92
660 661 3.995048 GCCAAGTAGCCTAATTCCGATAC 59.005 47.826 0.00 0.00 0.00 2.24
661 662 4.566987 CCAAGTAGCCTAATTCCGATACC 58.433 47.826 0.00 0.00 0.00 2.73
662 663 4.562963 CCAAGTAGCCTAATTCCGATACCC 60.563 50.000 0.00 0.00 0.00 3.69
663 664 4.129317 AGTAGCCTAATTCCGATACCCT 57.871 45.455 0.00 0.00 0.00 4.34
664 665 5.266709 AGTAGCCTAATTCCGATACCCTA 57.733 43.478 0.00 0.00 0.00 3.53
665 666 5.015515 AGTAGCCTAATTCCGATACCCTAC 58.984 45.833 0.00 0.00 0.00 3.18
666 667 3.171528 AGCCTAATTCCGATACCCTACC 58.828 50.000 0.00 0.00 0.00 3.18
667 668 2.901839 GCCTAATTCCGATACCCTACCA 59.098 50.000 0.00 0.00 0.00 3.25
668 669 3.325716 GCCTAATTCCGATACCCTACCAA 59.674 47.826 0.00 0.00 0.00 3.67
669 670 4.562963 GCCTAATTCCGATACCCTACCAAG 60.563 50.000 0.00 0.00 0.00 3.61
670 671 4.020485 CCTAATTCCGATACCCTACCAAGG 60.020 50.000 0.00 0.00 43.25 3.61
671 672 2.555732 TTCCGATACCCTACCAAGGT 57.444 50.000 0.00 0.00 41.89 3.50
672 673 3.686227 TTCCGATACCCTACCAAGGTA 57.314 47.619 0.00 0.00 43.86 3.08
679 680 3.778622 ACCCTACCAAGGTATCTGTCT 57.221 47.619 0.00 0.00 41.89 3.41
680 681 3.375699 ACCCTACCAAGGTATCTGTCTG 58.624 50.000 0.00 0.00 41.89 3.51
681 682 3.012502 ACCCTACCAAGGTATCTGTCTGA 59.987 47.826 0.00 0.00 41.89 3.27
682 683 4.227197 CCCTACCAAGGTATCTGTCTGAT 58.773 47.826 0.00 0.00 41.89 2.90
683 684 4.656112 CCCTACCAAGGTATCTGTCTGATT 59.344 45.833 0.00 0.00 41.89 2.57
684 685 5.131142 CCCTACCAAGGTATCTGTCTGATTT 59.869 44.000 0.00 0.00 41.89 2.17
685 686 6.326583 CCCTACCAAGGTATCTGTCTGATTTA 59.673 42.308 0.00 0.00 41.89 1.40
686 687 7.437748 CCTACCAAGGTATCTGTCTGATTTAG 58.562 42.308 0.00 0.00 38.19 1.85
687 688 5.675538 ACCAAGGTATCTGTCTGATTTAGC 58.324 41.667 0.00 0.00 36.65 3.09
688 689 5.426833 ACCAAGGTATCTGTCTGATTTAGCT 59.573 40.000 0.00 0.00 36.65 3.32
689 690 5.988561 CCAAGGTATCTGTCTGATTTAGCTC 59.011 44.000 0.00 0.00 36.65 4.09
690 691 6.183360 CCAAGGTATCTGTCTGATTTAGCTCT 60.183 42.308 0.00 0.00 36.65 4.09
691 692 6.403866 AGGTATCTGTCTGATTTAGCTCTG 57.596 41.667 0.00 0.00 36.65 3.35
692 693 6.132658 AGGTATCTGTCTGATTTAGCTCTGA 58.867 40.000 0.00 0.00 36.65 3.27
693 694 6.782000 AGGTATCTGTCTGATTTAGCTCTGAT 59.218 38.462 0.00 0.00 36.65 2.90
694 695 7.947332 AGGTATCTGTCTGATTTAGCTCTGATA 59.053 37.037 0.00 0.00 36.65 2.15
695 696 8.243426 GGTATCTGTCTGATTTAGCTCTGATAG 58.757 40.741 0.00 0.00 36.65 2.08
696 697 6.690530 ATCTGTCTGATTTAGCTCTGATAGC 58.309 40.000 0.00 0.00 41.30 2.97
697 698 6.295236 ATCTGTCTGATTTAGCTCTGATAGCC 60.295 42.308 0.00 0.00 41.69 3.93
698 699 8.402981 ATCTGTCTGATTTAGCTCTGATAGCCT 61.403 40.741 0.00 0.00 41.69 4.58
704 705 3.432517 GCTCTGATAGCCTATGCCG 57.567 57.895 0.00 0.00 46.25 5.69
705 706 0.891373 GCTCTGATAGCCTATGCCGA 59.109 55.000 0.00 0.00 46.25 5.54
706 707 1.135141 GCTCTGATAGCCTATGCCGAG 60.135 57.143 0.00 0.00 46.25 4.63
707 708 1.476085 CTCTGATAGCCTATGCCGAGG 59.524 57.143 0.00 0.00 38.69 4.63
708 709 1.075536 TCTGATAGCCTATGCCGAGGA 59.924 52.381 5.19 0.00 39.15 3.71
709 710 1.203523 CTGATAGCCTATGCCGAGGAC 59.796 57.143 5.19 0.00 39.15 3.85
710 711 0.533032 GATAGCCTATGCCGAGGACC 59.467 60.000 5.19 0.00 39.15 4.46
711 712 0.178932 ATAGCCTATGCCGAGGACCA 60.179 55.000 5.19 0.00 39.15 4.02
712 713 1.113517 TAGCCTATGCCGAGGACCAC 61.114 60.000 5.19 0.00 39.15 4.16
713 714 2.822399 CCTATGCCGAGGACCACC 59.178 66.667 0.00 0.00 39.15 4.61
714 715 2.417516 CTATGCCGAGGACCACCG 59.582 66.667 0.00 0.00 41.83 4.94
715 716 3.792053 CTATGCCGAGGACCACCGC 62.792 68.421 0.00 0.00 41.83 5.68
732 733 3.636231 CTGCACCCGAGACCCCAA 61.636 66.667 0.00 0.00 0.00 4.12
733 734 3.612247 CTGCACCCGAGACCCCAAG 62.612 68.421 0.00 0.00 0.00 3.61
734 735 3.319198 GCACCCGAGACCCCAAGA 61.319 66.667 0.00 0.00 0.00 3.02
735 736 2.982130 CACCCGAGACCCCAAGAG 59.018 66.667 0.00 0.00 0.00 2.85
736 737 2.284699 ACCCGAGACCCCAAGAGG 60.285 66.667 0.00 0.00 0.00 3.69
737 738 2.038975 CCCGAGACCCCAAGAGGA 59.961 66.667 0.00 0.00 38.24 3.71
738 739 1.612442 CCCGAGACCCCAAGAGGAA 60.612 63.158 0.00 0.00 38.24 3.36
739 740 1.617947 CCCGAGACCCCAAGAGGAAG 61.618 65.000 0.00 0.00 38.24 3.46
740 741 1.219393 CGAGACCCCAAGAGGAAGC 59.781 63.158 0.00 0.00 38.24 3.86
741 742 1.219393 GAGACCCCAAGAGGAAGCG 59.781 63.158 0.00 0.00 38.24 4.68
742 743 2.245438 GAGACCCCAAGAGGAAGCGG 62.245 65.000 0.00 0.00 38.24 5.52
743 744 3.978571 GACCCCAAGAGGAAGCGGC 62.979 68.421 0.00 0.00 38.24 6.53
744 745 4.803908 CCCCAAGAGGAAGCGGCC 62.804 72.222 0.00 0.00 38.24 6.13
758 759 4.796495 GGCCGGCGAGGAAATGGT 62.796 66.667 22.54 0.00 45.00 3.55
759 760 2.188469 GCCGGCGAGGAAATGGTA 59.812 61.111 12.58 0.00 45.00 3.25
760 761 1.450669 GCCGGCGAGGAAATGGTAA 60.451 57.895 12.58 0.00 45.00 2.85
761 762 1.027792 GCCGGCGAGGAAATGGTAAA 61.028 55.000 12.58 0.00 45.00 2.01
762 763 0.730840 CCGGCGAGGAAATGGTAAAC 59.269 55.000 9.30 0.00 45.00 2.01
763 764 1.677820 CCGGCGAGGAAATGGTAAACT 60.678 52.381 9.30 0.00 45.00 2.66
764 765 2.081462 CGGCGAGGAAATGGTAAACTT 58.919 47.619 0.00 0.00 0.00 2.66
765 766 2.095372 CGGCGAGGAAATGGTAAACTTC 59.905 50.000 0.00 0.00 0.00 3.01
766 767 3.078837 GGCGAGGAAATGGTAAACTTCA 58.921 45.455 0.00 0.00 0.00 3.02
767 768 3.504520 GGCGAGGAAATGGTAAACTTCAA 59.495 43.478 0.00 0.00 0.00 2.69
768 769 4.473199 GCGAGGAAATGGTAAACTTCAAC 58.527 43.478 0.00 0.00 0.00 3.18
769 770 4.615223 GCGAGGAAATGGTAAACTTCAACC 60.615 45.833 0.00 0.00 36.24 3.77
770 771 4.378046 CGAGGAAATGGTAAACTTCAACCG 60.378 45.833 0.00 0.00 38.70 4.44
771 772 3.824443 AGGAAATGGTAAACTTCAACCGG 59.176 43.478 0.00 0.00 38.70 5.28
772 773 3.571571 GAAATGGTAAACTTCAACCGGC 58.428 45.455 0.00 0.00 38.70 6.13
773 774 2.579410 ATGGTAAACTTCAACCGGCT 57.421 45.000 0.00 0.00 38.70 5.52
774 775 2.351706 TGGTAAACTTCAACCGGCTT 57.648 45.000 0.00 0.00 38.70 4.35
775 776 2.657143 TGGTAAACTTCAACCGGCTTT 58.343 42.857 0.00 0.00 38.70 3.51
776 777 3.025262 TGGTAAACTTCAACCGGCTTTT 58.975 40.909 0.00 0.00 38.70 2.27
777 778 3.447944 TGGTAAACTTCAACCGGCTTTTT 59.552 39.130 0.00 0.00 38.70 1.94
824 825 8.608844 AGGTTTTAGTTAAGTGATGAACTCTG 57.391 34.615 0.00 0.00 38.56 3.35
825 826 7.661847 AGGTTTTAGTTAAGTGATGAACTCTGG 59.338 37.037 0.00 0.00 38.56 3.86
826 827 7.444487 GGTTTTAGTTAAGTGATGAACTCTGGT 59.556 37.037 0.00 0.00 38.56 4.00
827 828 9.485206 GTTTTAGTTAAGTGATGAACTCTGGTA 57.515 33.333 0.00 0.00 38.56 3.25
829 830 9.485206 TTTAGTTAAGTGATGAACTCTGGTAAC 57.515 33.333 0.00 0.00 38.56 2.50
830 831 7.304497 AGTTAAGTGATGAACTCTGGTAACT 57.696 36.000 0.00 0.00 38.56 2.24
831 832 7.736893 AGTTAAGTGATGAACTCTGGTAACTT 58.263 34.615 0.00 0.00 36.17 2.66
832 833 8.211629 AGTTAAGTGATGAACTCTGGTAACTTT 58.788 33.333 0.00 0.00 36.17 2.66
833 834 8.837389 GTTAAGTGATGAACTCTGGTAACTTTT 58.163 33.333 0.00 0.00 38.56 2.27
834 835 7.881775 AAGTGATGAACTCTGGTAACTTTTT 57.118 32.000 0.00 0.00 38.56 1.94
859 860 9.607988 TTTGAATCAGACTGTACTAAAACTTGA 57.392 29.630 1.59 0.00 0.00 3.02
860 861 9.778741 TTGAATCAGACTGTACTAAAACTTGAT 57.221 29.630 1.59 0.00 0.00 2.57
864 865 8.703604 TCAGACTGTACTAAAACTTGATATGC 57.296 34.615 1.59 0.00 0.00 3.14
865 866 8.531982 TCAGACTGTACTAAAACTTGATATGCT 58.468 33.333 1.59 0.00 0.00 3.79
866 867 9.803315 CAGACTGTACTAAAACTTGATATGCTA 57.197 33.333 0.00 0.00 0.00 3.49
880 881 9.182214 ACTTGATATGCTATGTTTTGAATCAGT 57.818 29.630 0.00 0.00 0.00 3.41
881 882 9.447040 CTTGATATGCTATGTTTTGAATCAGTG 57.553 33.333 0.00 0.00 0.00 3.66
882 883 7.933396 TGATATGCTATGTTTTGAATCAGTGG 58.067 34.615 0.00 0.00 0.00 4.00
883 884 7.557358 TGATATGCTATGTTTTGAATCAGTGGT 59.443 33.333 0.00 0.00 0.00 4.16
884 885 8.978874 ATATGCTATGTTTTGAATCAGTGGTA 57.021 30.769 0.00 0.00 0.00 3.25
885 886 7.701539 ATGCTATGTTTTGAATCAGTGGTAA 57.298 32.000 0.00 0.00 0.00 2.85
886 887 7.517614 TGCTATGTTTTGAATCAGTGGTAAA 57.482 32.000 0.00 0.00 0.00 2.01
887 888 7.367285 TGCTATGTTTTGAATCAGTGGTAAAC 58.633 34.615 1.70 1.70 0.00 2.01
888 889 7.230510 TGCTATGTTTTGAATCAGTGGTAAACT 59.769 33.333 8.40 0.00 40.93 2.66
889 890 8.082242 GCTATGTTTTGAATCAGTGGTAAACTT 58.918 33.333 8.40 5.53 36.83 2.66
890 891 9.965824 CTATGTTTTGAATCAGTGGTAAACTTT 57.034 29.630 8.40 1.28 36.83 2.66
902 903 9.059260 TCAGTGGTAAACTTTAATTAGAACACC 57.941 33.333 0.00 0.00 36.83 4.16
903 904 8.842280 CAGTGGTAAACTTTAATTAGAACACCA 58.158 33.333 0.00 0.00 36.83 4.17
904 905 9.411189 AGTGGTAAACTTTAATTAGAACACCAA 57.589 29.630 0.00 0.00 34.57 3.67
920 921 8.065473 AGAACACCAATATACAATTTGATGCA 57.935 30.769 2.79 0.00 0.00 3.96
921 922 8.698210 AGAACACCAATATACAATTTGATGCAT 58.302 29.630 0.00 0.00 0.00 3.96
922 923 9.964303 GAACACCAATATACAATTTGATGCATA 57.036 29.630 0.00 0.00 0.00 3.14
934 935 8.456471 ACAATTTGATGCATATAATCGAGATGG 58.544 33.333 0.00 0.00 0.00 3.51
935 936 8.456471 CAATTTGATGCATATAATCGAGATGGT 58.544 33.333 0.00 0.00 0.00 3.55
936 937 9.671279 AATTTGATGCATATAATCGAGATGGTA 57.329 29.630 0.00 0.00 0.00 3.25
937 938 9.671279 ATTTGATGCATATAATCGAGATGGTAA 57.329 29.630 0.00 0.00 0.00 2.85
938 939 9.500785 TTTGATGCATATAATCGAGATGGTAAA 57.499 29.630 0.00 0.00 0.00 2.01
939 940 9.500785 TTGATGCATATAATCGAGATGGTAAAA 57.499 29.630 0.00 0.00 0.00 1.52
940 941 8.935844 TGATGCATATAATCGAGATGGTAAAAC 58.064 33.333 0.00 0.00 0.00 2.43
941 942 7.667043 TGCATATAATCGAGATGGTAAAACC 57.333 36.000 0.00 0.00 39.22 3.27
942 943 6.367695 TGCATATAATCGAGATGGTAAAACCG 59.632 38.462 0.00 0.00 42.58 4.44
943 944 6.672357 GCATATAATCGAGATGGTAAAACCGC 60.672 42.308 0.00 0.00 42.58 5.68
944 945 2.684001 ATCGAGATGGTAAAACCGCA 57.316 45.000 0.00 0.00 42.58 5.69
945 946 2.684001 TCGAGATGGTAAAACCGCAT 57.316 45.000 0.00 0.00 42.58 4.73
946 947 3.804786 TCGAGATGGTAAAACCGCATA 57.195 42.857 0.00 0.00 42.58 3.14
947 948 4.126208 TCGAGATGGTAAAACCGCATAA 57.874 40.909 0.00 0.00 42.58 1.90
948 949 4.699637 TCGAGATGGTAAAACCGCATAAT 58.300 39.130 0.00 0.00 42.58 1.28
949 950 4.509970 TCGAGATGGTAAAACCGCATAATG 59.490 41.667 0.00 0.00 42.58 1.90
950 951 4.272504 CGAGATGGTAAAACCGCATAATGT 59.727 41.667 0.00 0.00 42.58 2.71
951 952 5.558273 CGAGATGGTAAAACCGCATAATGTC 60.558 44.000 0.00 0.00 42.58 3.06
952 953 4.578928 AGATGGTAAAACCGCATAATGTCC 59.421 41.667 0.00 0.00 42.58 4.02
957 958 1.935933 AACCGCATAATGTCCTCGTC 58.064 50.000 0.00 0.00 0.00 4.20
1001 1002 0.621571 TACTGCCATGGCCTCCTTCT 60.622 55.000 33.44 10.23 41.09 2.85
1007 1008 0.758123 CATGGCCTCCTTCTCTCTCC 59.242 60.000 3.32 0.00 0.00 3.71
1008 1009 0.641601 ATGGCCTCCTTCTCTCTCCT 59.358 55.000 3.32 0.00 0.00 3.69
1009 1010 0.032615 TGGCCTCCTTCTCTCTCCTC 60.033 60.000 3.32 0.00 0.00 3.71
1344 1345 2.347490 CCCTTGCAGGTACGCACT 59.653 61.111 0.00 0.00 42.87 4.40
1368 1369 4.837093 ACCCGGTTCTGAGATATTTTCA 57.163 40.909 0.00 0.00 0.00 2.69
1371 1372 6.895782 ACCCGGTTCTGAGATATTTTCATTA 58.104 36.000 0.00 0.00 0.00 1.90
1486 1488 5.335897 CCACTTAAACACCACTCCATGATTG 60.336 44.000 0.00 0.00 0.00 2.67
1559 1561 5.254032 AGGTCCAATCCAAAGAAGAGGTAAT 59.746 40.000 0.00 0.00 0.00 1.89
1600 1602 2.882742 GCTTGTGGCGTTCTTAGAAG 57.117 50.000 0.00 0.00 0.00 2.85
1602 1604 2.870435 GCTTGTGGCGTTCTTAGAAGGA 60.870 50.000 17.43 0.00 0.00 3.36
1604 1606 2.244695 TGTGGCGTTCTTAGAAGGAGA 58.755 47.619 17.43 1.15 0.00 3.71
1605 1607 2.832129 TGTGGCGTTCTTAGAAGGAGAT 59.168 45.455 17.43 0.00 0.00 2.75
1607 1609 3.866327 GTGGCGTTCTTAGAAGGAGATTC 59.134 47.826 17.43 0.66 38.28 2.52
1771 1776 3.371965 TGACCTACTCCAGTTATGACCC 58.628 50.000 0.00 0.00 0.00 4.46
1809 1816 3.925299 TGCCACAATATGCAAACAAATCG 59.075 39.130 0.00 0.00 33.87 3.34
1960 1967 1.497286 GGGCCATTATCCAAGTACCCA 59.503 52.381 4.39 0.00 36.07 4.51
2075 2322 1.110518 GGTCCTTTTTGGGCACGGAA 61.111 55.000 0.00 0.00 43.75 4.30
2113 2360 3.077519 GCTCCTACGTGCACGGGAT 62.078 63.158 39.21 23.39 44.95 3.85
2114 2361 1.226974 CTCCTACGTGCACGGGATG 60.227 63.158 39.21 24.60 44.95 3.51
2164 2411 5.065914 TCTGCCTTGTATTGCTATGGAATC 58.934 41.667 0.00 0.00 0.00 2.52
2505 2752 3.387374 TGGGGCAAATATTGTAAGCATGG 59.613 43.478 0.00 0.00 0.00 3.66
2522 2769 3.592059 CATGGCCATGGAGAAAACAAAG 58.408 45.455 34.31 7.14 35.24 2.77
2562 2811 8.810427 TCGTAAATAGGTAATAGAAAGCGTTTG 58.190 33.333 0.00 0.00 0.00 2.93
2777 5600 8.647143 ACTTGACATGGTTTTAGTTCAAATTG 57.353 30.769 0.00 0.00 0.00 2.32
2786 5609 9.454859 TGGTTTTAGTTCAAATTGTTTTGGAAT 57.545 25.926 0.00 0.00 42.10 3.01
2803 5626 3.849574 TGGAATGGAGGGAGTAACATTCA 59.150 43.478 15.45 2.81 46.71 2.57
2804 5627 4.290985 TGGAATGGAGGGAGTAACATTCAA 59.709 41.667 15.45 4.33 46.71 2.69
2805 5628 5.222233 TGGAATGGAGGGAGTAACATTCAAA 60.222 40.000 15.45 3.64 46.71 2.69
3124 5976 1.610522 GGTCAGCACATGGAATATGCC 59.389 52.381 0.00 0.00 40.33 4.40
3326 6187 8.607441 TTCTCAATCCCAATTAAGTATCATCG 57.393 34.615 0.00 0.00 0.00 3.84
3613 6494 3.823873 CCCTACATCTGCTAGTCTACCTG 59.176 52.174 0.00 0.00 0.00 4.00
4021 6946 6.194235 TGAGGGTTGGTCTAATGCAATAAAT 58.806 36.000 0.00 0.00 0.00 1.40
4026 6951 6.321181 GGTTGGTCTAATGCAATAAATCTGGA 59.679 38.462 0.00 0.00 0.00 3.86
4097 7023 6.805271 CCGTGAAACTTAGAGATTCGAAGTAA 59.195 38.462 3.35 0.00 40.59 2.24
5758 8893 7.406799 AAACCAAAAATCATCGTTTCATCAC 57.593 32.000 0.00 0.00 0.00 3.06
5766 8902 9.778993 AAAATCATCGTTTCATCACTTGATAAG 57.221 29.630 0.00 0.00 33.34 1.73
5842 8981 5.586643 AGTTGCTTAGGATTTTCGAGGATTC 59.413 40.000 0.00 0.00 0.00 2.52
5960 9100 7.305474 AGATAAGTAACAGCCAAATTTGAACG 58.695 34.615 19.86 9.10 0.00 3.95
5971 9111 6.206634 AGCCAAATTTGAACGTCTTAGAATGA 59.793 34.615 19.86 0.00 0.00 2.57
5981 9121 7.542477 TGAACGTCTTAGAATGATTCTGAAGAC 59.458 37.037 26.42 26.42 41.14 3.01
5991 9131 9.995003 AGAATGATTCTGAAGACATAGTATTCC 57.005 33.333 6.93 0.00 38.91 3.01
6009 9149 7.573710 AGTATTCCACTATTGGTGCTATTTCA 58.426 34.615 0.00 0.00 44.35 2.69
6023 9163 4.570772 TGCTATTTCAGGCAAGAATCGTAC 59.429 41.667 0.00 0.00 35.40 3.67
6042 9182 1.075050 ACACCTAGACGGAAGGAGTGA 59.925 52.381 6.93 0.00 36.69 3.41
6056 9196 2.887152 AGGAGTGAAACATTGAAGCACC 59.113 45.455 0.00 0.00 41.43 5.01
6072 9212 2.769663 AGCACCACTATCCGTATTTCCA 59.230 45.455 0.00 0.00 0.00 3.53
6081 9221 7.095774 CCACTATCCGTATTTCCATTAAACGAG 60.096 40.741 0.00 0.00 0.00 4.18
6082 9222 7.437267 CACTATCCGTATTTCCATTAAACGAGT 59.563 37.037 0.00 0.00 0.00 4.18
6139 9280 3.057969 TGACAGTGCCCTTCATTACAG 57.942 47.619 0.00 0.00 0.00 2.74
6342 9483 5.964477 TCCTCCTAACACCAGATTTCTGTAT 59.036 40.000 6.81 0.00 42.27 2.29
6343 9484 7.069578 GTCCTCCTAACACCAGATTTCTGTATA 59.930 40.741 6.81 0.00 42.27 1.47
6378 9535 0.910088 GTCAACTAGGGGGAGGCAGT 60.910 60.000 0.00 0.00 0.00 4.40
6400 9557 1.384989 CCGTAGCTGATCGAGGTGGT 61.385 60.000 0.00 0.00 33.31 4.16
6401 9558 0.456221 CGTAGCTGATCGAGGTGGTT 59.544 55.000 0.00 0.00 33.31 3.67
6402 9559 1.799181 CGTAGCTGATCGAGGTGGTTG 60.799 57.143 0.00 0.00 33.31 3.77
6445 9602 2.387445 CGTTCATTCGCCGGCTTCA 61.387 57.895 26.68 8.36 0.00 3.02
6492 9652 7.321153 TGTTGTTTTACGATTTTTCCTTTCCA 58.679 30.769 0.00 0.00 0.00 3.53
6503 9663 7.359514 CGATTTTTCCTTTCCAATTCTTTCAGC 60.360 37.037 0.00 0.00 0.00 4.26
6504 9664 6.484364 TTTTCCTTTCCAATTCTTTCAGCT 57.516 33.333 0.00 0.00 0.00 4.24
6842 10007 1.267533 GCCCATTTGCCTTTGCTTTTG 59.732 47.619 0.00 0.00 38.71 2.44
6844 10009 3.414269 CCCATTTGCCTTTGCTTTTGAT 58.586 40.909 0.00 0.00 38.71 2.57
6845 10010 4.577875 CCCATTTGCCTTTGCTTTTGATA 58.422 39.130 0.00 0.00 38.71 2.15
6848 10030 5.389725 CCATTTGCCTTTGCTTTTGATAACG 60.390 40.000 0.00 0.00 38.71 3.18
6853 10035 2.604969 TTGCTTTTGATAACGACGCC 57.395 45.000 0.00 0.00 0.00 5.68
7003 10190 6.123651 AGAAGGTATTCTAGACGATGTGTCT 58.876 40.000 2.81 2.81 44.54 3.41
7140 10327 2.126618 CGCTGCAATGCCACACAG 60.127 61.111 1.53 0.00 0.00 3.66
7171 10358 0.604780 CCATCGTCATGGCATCCTCC 60.605 60.000 0.00 0.00 43.55 4.30
7239 10426 0.249489 GAAGCCGCGGTATGTGATCT 60.249 55.000 28.70 9.64 0.00 2.75
7273 10460 6.481976 TGCGTGTATTAGCTTGCATTATACTT 59.518 34.615 0.00 0.00 0.00 2.24
7471 10659 3.006967 GGAGCTTGACAACAGAAGGTCTA 59.993 47.826 0.00 0.00 39.12 2.59
7611 10801 1.009829 GGAAGATTGTCGAAGCGCAT 58.990 50.000 11.47 0.00 0.00 4.73
7825 11015 1.203288 TCCCAGGGGCATTTTTCATGT 60.203 47.619 5.33 0.00 34.68 3.21
7860 11050 3.131478 GCTATGGCAACCGCGGTT 61.131 61.111 36.96 36.96 39.92 4.44
7974 11164 4.383602 CGCGGAACCGTGGCAAAG 62.384 66.667 17.45 0.00 44.95 2.77
7990 11180 7.357303 CGTGGCAAAGTAAACTAAATTACTGT 58.643 34.615 0.00 0.00 43.52 3.55
7999 11189 9.925268 AGTAAACTAAATTACTGTTGTTCGTTG 57.075 29.630 0.00 0.00 42.88 4.10
8007 11197 8.710835 AATTACTGTTGTTCGTTGGAAATTTT 57.289 26.923 0.00 0.00 33.05 1.82
8008 11198 9.804758 AATTACTGTTGTTCGTTGGAAATTTTA 57.195 25.926 0.00 0.00 33.05 1.52
8010 11200 6.270064 ACTGTTGTTCGTTGGAAATTTTAGG 58.730 36.000 0.00 0.00 33.05 2.69
8011 11201 6.095720 ACTGTTGTTCGTTGGAAATTTTAGGA 59.904 34.615 0.00 0.00 33.05 2.94
8016 11222 4.082845 TCGTTGGAAATTTTAGGATGCCA 58.917 39.130 0.00 0.00 0.00 4.92
8029 11235 8.830915 TTTTAGGATGCCAATAATTGTTAGGA 57.169 30.769 7.32 0.00 0.00 2.94
8111 11321 6.106673 GGAGCTAAGCTTATGAGTGTTTACA 58.893 40.000 6.64 0.00 39.88 2.41
8151 11361 4.362279 TCAGTTTTCATTGTGCAAAGCTC 58.638 39.130 0.00 0.00 0.00 4.09
8185 11395 0.676466 TGGCCTGGTTATGCAACTCG 60.676 55.000 3.32 0.00 34.88 4.18
8224 11434 4.550422 ACTCGGAAAGTAAACGTTAGTCC 58.450 43.478 0.00 3.52 36.07 3.85
8319 11727 2.572556 TCTCCACCTTTAACCCGCATTA 59.427 45.455 0.00 0.00 0.00 1.90
8326 11734 4.773149 ACCTTTAACCCGCATTAAAATCCA 59.227 37.500 4.33 0.00 34.46 3.41
8332 11740 5.923733 ACCCGCATTAAAATCCATAAACA 57.076 34.783 0.00 0.00 0.00 2.83
8336 11744 7.826744 ACCCGCATTAAAATCCATAAACATTTT 59.173 29.630 0.00 0.00 36.43 1.82
8367 11775 4.547406 ATGCACAGAATCATCACAATCG 57.453 40.909 0.00 0.00 0.00 3.34
8390 11798 4.439776 GTGTCACAATTAGCGAAAAACCAC 59.560 41.667 0.00 0.00 0.00 4.16
8404 11835 5.388408 AAAAACCACCACTTTACGAAACA 57.612 34.783 0.00 0.00 0.00 2.83
8424 11855 3.955775 GCATTTTGCACTGCACCC 58.044 55.556 2.26 0.00 44.26 4.61
8426 11857 1.223417 GCATTTTGCACTGCACCCAC 61.223 55.000 2.26 0.00 44.26 4.61
8435 11866 0.738389 ACTGCACCCACTTTTTGACG 59.262 50.000 0.00 0.00 0.00 4.35
8440 11871 1.362355 CCCACTTTTTGACGGTGCC 59.638 57.895 0.00 0.00 0.00 5.01
8441 11872 1.388065 CCCACTTTTTGACGGTGCCA 61.388 55.000 0.00 0.00 0.00 4.92
8442 11873 0.457851 CCACTTTTTGACGGTGCCAA 59.542 50.000 0.00 0.00 0.00 4.52
8443 11874 1.134965 CCACTTTTTGACGGTGCCAAA 60.135 47.619 0.00 0.00 0.00 3.28
8444 11875 2.611518 CACTTTTTGACGGTGCCAAAA 58.388 42.857 4.24 4.24 40.47 2.44
8445 11876 2.996621 CACTTTTTGACGGTGCCAAAAA 59.003 40.909 15.41 15.41 45.57 1.94
8498 11929 1.226717 GACGTGTCTGATCCCTCGC 60.227 63.158 0.00 0.00 0.00 5.03
8509 11940 4.514577 CCCTCGCGAGCCGACAAT 62.515 66.667 30.49 0.00 41.89 2.71
8534 11965 3.781162 GTGCGGCGTAAACGACCC 61.781 66.667 9.37 0.00 46.52 4.46
8541 11972 1.067635 GGCGTAAACGACCCTTGACTA 60.068 52.381 6.71 0.00 42.67 2.59
8542 11973 2.257034 GCGTAAACGACCCTTGACTAG 58.743 52.381 6.71 0.00 43.02 2.57
8557 11988 2.030185 TGACTAGTCTGTCGGAAGTTGC 60.030 50.000 23.01 0.00 39.64 4.17
8586 12017 0.318762 ACAAACCCGAGCACTCTCTC 59.681 55.000 0.00 0.00 37.19 3.20
8589 12020 2.043450 CCCGAGCACTCTCTCCCT 60.043 66.667 0.00 0.00 37.19 4.20
8599 12030 1.339631 ACTCTCTCCCTCAGTCACTCG 60.340 57.143 0.00 0.00 0.00 4.18
8618 12049 2.203998 CCTCCCACCCACCTCACT 60.204 66.667 0.00 0.00 0.00 3.41
8636 12067 1.906574 ACTCTCTCTCACCTCTCTCGT 59.093 52.381 0.00 0.00 0.00 4.18
8642 12073 2.997315 CACCTCTCTCGTGGGGCA 60.997 66.667 0.00 0.00 0.00 5.36
8714 12145 1.702401 TGGTGGGTACAGAGCATCAAA 59.298 47.619 0.00 0.00 37.82 2.69
8715 12146 2.290260 TGGTGGGTACAGAGCATCAAAG 60.290 50.000 0.00 0.00 37.82 2.77
8716 12147 1.740025 GTGGGTACAGAGCATCAAAGC 59.260 52.381 0.00 0.00 37.82 3.51
8717 12148 1.009829 GGGTACAGAGCATCAAAGCG 58.990 55.000 0.00 0.00 40.15 4.68
8718 12149 0.375106 GGTACAGAGCATCAAAGCGC 59.625 55.000 0.00 0.00 40.15 5.92
8719 12150 1.078709 GTACAGAGCATCAAAGCGCA 58.921 50.000 11.47 0.00 40.15 6.09
8720 12151 1.061711 GTACAGAGCATCAAAGCGCAG 59.938 52.381 11.47 0.00 40.15 5.18
8721 12152 0.321034 ACAGAGCATCAAAGCGCAGA 60.321 50.000 11.47 4.68 40.15 4.26
8722 12153 1.015109 CAGAGCATCAAAGCGCAGAT 58.985 50.000 11.47 7.23 40.15 2.90
8723 12154 1.015109 AGAGCATCAAAGCGCAGATG 58.985 50.000 24.32 24.32 43.42 2.90
8724 12155 0.029035 GAGCATCAAAGCGCAGATGG 59.971 55.000 27.34 15.67 41.43 3.51
8725 12156 1.588139 GCATCAAAGCGCAGATGGC 60.588 57.895 27.34 19.54 41.43 4.40
8802 12242 4.332819 GCAGTAGCCTATTTCGTTCATTGT 59.667 41.667 0.00 0.00 33.58 2.71
8811 12251 1.154413 CGTTCATTGTCGCCACTGC 60.154 57.895 0.00 0.00 0.00 4.40
8834 12274 4.681978 GCGGCAGAAGTCACCCGT 62.682 66.667 0.00 0.00 42.54 5.28
8849 12289 3.246112 CGTGGGGTGGTGGAGGAA 61.246 66.667 0.00 0.00 0.00 3.36
8895 12335 3.791973 CGTGAGCTACATTCTCCTCTT 57.208 47.619 0.00 0.00 0.00 2.85
8900 12340 3.373830 AGCTACATTCTCCTCTTGAGCT 58.626 45.455 0.00 0.00 41.18 4.09
8901 12341 3.132646 AGCTACATTCTCCTCTTGAGCTG 59.867 47.826 0.00 0.00 41.18 4.24
8902 12342 3.118811 GCTACATTCTCCTCTTGAGCTGT 60.119 47.826 0.00 0.00 41.18 4.40
8924 12364 8.325046 GCTGTCCCCTCTCTATATATTCATTTT 58.675 37.037 0.00 0.00 0.00 1.82
8943 12383 5.982465 TTTTGTTGCTGCAATTTAAGGTC 57.018 34.783 19.11 3.42 0.00 3.85
8945 12385 2.298729 TGTTGCTGCAATTTAAGGTCCC 59.701 45.455 19.11 1.94 0.00 4.46
8949 12389 3.026694 GCTGCAATTTAAGGTCCCAGAT 58.973 45.455 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 2.762745 GCCCGTCTTGAAACTAGTTCA 58.237 47.619 8.95 6.15 44.74 3.18
12 13 1.725164 CGCCCGTCTTGAAACTAGTTC 59.275 52.381 8.95 3.51 36.70 3.01
13 14 1.342174 TCGCCCGTCTTGAAACTAGTT 59.658 47.619 1.12 1.12 0.00 2.24
14 15 0.963962 TCGCCCGTCTTGAAACTAGT 59.036 50.000 0.00 0.00 0.00 2.57
15 16 1.067776 AGTCGCCCGTCTTGAAACTAG 60.068 52.381 0.00 0.00 0.00 2.57
16 17 0.963962 AGTCGCCCGTCTTGAAACTA 59.036 50.000 0.00 0.00 0.00 2.24
17 18 0.600255 CAGTCGCCCGTCTTGAAACT 60.600 55.000 0.00 0.00 0.00 2.66
18 19 0.599204 TCAGTCGCCCGTCTTGAAAC 60.599 55.000 0.00 0.00 0.00 2.78
19 20 0.105224 TTCAGTCGCCCGTCTTGAAA 59.895 50.000 0.00 0.00 0.00 2.69
20 21 0.319555 CTTCAGTCGCCCGTCTTGAA 60.320 55.000 0.00 0.00 0.00 2.69
21 22 1.176619 TCTTCAGTCGCCCGTCTTGA 61.177 55.000 0.00 0.00 0.00 3.02
22 23 1.009389 GTCTTCAGTCGCCCGTCTTG 61.009 60.000 0.00 0.00 0.00 3.02
23 24 1.289380 GTCTTCAGTCGCCCGTCTT 59.711 57.895 0.00 0.00 0.00 3.01
24 25 2.963371 GTCTTCAGTCGCCCGTCT 59.037 61.111 0.00 0.00 0.00 4.18
25 26 2.267681 ATCGTCTTCAGTCGCCCGTC 62.268 60.000 0.00 0.00 0.00 4.79
26 27 2.341101 ATCGTCTTCAGTCGCCCGT 61.341 57.895 0.00 0.00 0.00 5.28
27 28 1.874019 CATCGTCTTCAGTCGCCCG 60.874 63.158 0.00 0.00 0.00 6.13
28 29 0.108804 TTCATCGTCTTCAGTCGCCC 60.109 55.000 0.00 0.00 0.00 6.13
29 30 1.272781 CTTCATCGTCTTCAGTCGCC 58.727 55.000 0.00 0.00 0.00 5.54
30 31 0.642800 GCTTCATCGTCTTCAGTCGC 59.357 55.000 0.00 0.00 0.00 5.19
31 32 1.916651 CTGCTTCATCGTCTTCAGTCG 59.083 52.381 0.00 0.00 0.00 4.18
32 33 1.658095 GCTGCTTCATCGTCTTCAGTC 59.342 52.381 0.00 0.00 0.00 3.51
33 34 1.274728 AGCTGCTTCATCGTCTTCAGT 59.725 47.619 0.00 0.00 0.00 3.41
34 35 1.925847 GAGCTGCTTCATCGTCTTCAG 59.074 52.381 2.53 0.00 0.00 3.02
35 36 1.733718 CGAGCTGCTTCATCGTCTTCA 60.734 52.381 2.53 0.00 0.00 3.02
36 37 0.919981 CGAGCTGCTTCATCGTCTTC 59.080 55.000 2.53 0.00 0.00 2.87
37 38 0.459237 CCGAGCTGCTTCATCGTCTT 60.459 55.000 2.53 0.00 34.71 3.01
38 39 1.140589 CCGAGCTGCTTCATCGTCT 59.859 57.895 2.53 0.00 34.71 4.18
39 40 0.458543 TTCCGAGCTGCTTCATCGTC 60.459 55.000 2.53 0.00 34.71 4.20
40 41 0.459237 CTTCCGAGCTGCTTCATCGT 60.459 55.000 2.53 0.00 34.71 3.73
41 42 1.150567 CCTTCCGAGCTGCTTCATCG 61.151 60.000 2.53 2.48 36.24 3.84
42 43 0.176680 TCCTTCCGAGCTGCTTCATC 59.823 55.000 2.53 0.00 0.00 2.92
43 44 0.107945 GTCCTTCCGAGCTGCTTCAT 60.108 55.000 2.53 0.00 0.00 2.57
44 45 1.293498 GTCCTTCCGAGCTGCTTCA 59.707 57.895 2.53 0.00 0.00 3.02
45 46 1.448717 GGTCCTTCCGAGCTGCTTC 60.449 63.158 2.53 0.00 36.01 3.86
46 47 2.665603 GGTCCTTCCGAGCTGCTT 59.334 61.111 2.53 0.00 36.01 3.91
55 56 1.153349 GCATCACCTCGGTCCTTCC 60.153 63.158 0.00 0.00 0.00 3.46
56 57 1.153349 GGCATCACCTCGGTCCTTC 60.153 63.158 0.00 0.00 34.51 3.46
57 58 2.990479 GGCATCACCTCGGTCCTT 59.010 61.111 0.00 0.00 34.51 3.36
58 59 3.461773 CGGCATCACCTCGGTCCT 61.462 66.667 0.00 0.00 35.61 3.85
60 61 3.665675 AAGCGGCATCACCTCGGTC 62.666 63.158 1.45 0.00 35.61 4.79
61 62 3.706373 AAGCGGCATCACCTCGGT 61.706 61.111 1.45 0.00 35.61 4.69
62 63 3.197790 CAAGCGGCATCACCTCGG 61.198 66.667 1.45 0.00 35.61 4.63
63 64 1.699656 CTTCAAGCGGCATCACCTCG 61.700 60.000 1.45 0.00 35.61 4.63
64 65 0.391661 TCTTCAAGCGGCATCACCTC 60.392 55.000 1.45 0.00 35.61 3.85
65 66 0.674895 GTCTTCAAGCGGCATCACCT 60.675 55.000 1.45 0.00 35.61 4.00
66 67 0.674895 AGTCTTCAAGCGGCATCACC 60.675 55.000 1.45 0.00 0.00 4.02
67 68 0.445436 CAGTCTTCAAGCGGCATCAC 59.555 55.000 1.45 0.00 0.00 3.06
68 69 0.674581 CCAGTCTTCAAGCGGCATCA 60.675 55.000 1.45 0.00 0.00 3.07
69 70 0.674895 ACCAGTCTTCAAGCGGCATC 60.675 55.000 1.45 0.00 0.00 3.91
70 71 0.250901 AACCAGTCTTCAAGCGGCAT 60.251 50.000 1.45 0.00 0.00 4.40
71 72 0.884704 GAACCAGTCTTCAAGCGGCA 60.885 55.000 1.45 0.00 0.00 5.69
72 73 0.884704 TGAACCAGTCTTCAAGCGGC 60.885 55.000 0.00 0.00 0.00 6.53
73 74 1.813513 ATGAACCAGTCTTCAAGCGG 58.186 50.000 0.00 0.00 33.85 5.52
74 75 2.932614 CCTATGAACCAGTCTTCAAGCG 59.067 50.000 0.00 0.00 33.85 4.68
75 76 3.944087 ACCTATGAACCAGTCTTCAAGC 58.056 45.455 0.00 0.00 33.85 4.01
76 77 6.702329 AGTAACCTATGAACCAGTCTTCAAG 58.298 40.000 0.00 0.00 33.85 3.02
77 78 6.681729 AGTAACCTATGAACCAGTCTTCAA 57.318 37.500 0.00 0.00 33.85 2.69
78 79 7.786046 TTAGTAACCTATGAACCAGTCTTCA 57.214 36.000 0.00 0.00 34.65 3.02
79 80 7.711339 CCATTAGTAACCTATGAACCAGTCTTC 59.289 40.741 0.00 0.00 0.00 2.87
80 81 7.182206 ACCATTAGTAACCTATGAACCAGTCTT 59.818 37.037 0.00 0.00 0.00 3.01
81 82 6.672657 ACCATTAGTAACCTATGAACCAGTCT 59.327 38.462 0.00 0.00 0.00 3.24
82 83 6.761714 CACCATTAGTAACCTATGAACCAGTC 59.238 42.308 0.00 0.00 0.00 3.51
83 84 6.214819 ACACCATTAGTAACCTATGAACCAGT 59.785 38.462 0.00 0.00 0.00 4.00
84 85 6.650120 ACACCATTAGTAACCTATGAACCAG 58.350 40.000 0.00 0.00 0.00 4.00
85 86 6.352394 GGACACCATTAGTAACCTATGAACCA 60.352 42.308 0.00 0.00 0.00 3.67
86 87 6.053650 GGACACCATTAGTAACCTATGAACC 58.946 44.000 0.00 0.00 0.00 3.62
87 88 6.761714 CAGGACACCATTAGTAACCTATGAAC 59.238 42.308 0.00 0.00 33.59 3.18
88 89 6.126883 CCAGGACACCATTAGTAACCTATGAA 60.127 42.308 0.00 0.00 33.59 2.57
89 90 5.365605 CCAGGACACCATTAGTAACCTATGA 59.634 44.000 0.00 0.00 33.59 2.15
90 91 5.611374 CCAGGACACCATTAGTAACCTATG 58.389 45.833 0.00 0.00 33.59 2.23
91 92 4.102681 GCCAGGACACCATTAGTAACCTAT 59.897 45.833 0.00 0.00 33.59 2.57
92 93 3.453353 GCCAGGACACCATTAGTAACCTA 59.547 47.826 0.00 0.00 33.59 3.08
93 94 2.238898 GCCAGGACACCATTAGTAACCT 59.761 50.000 0.00 0.00 34.72 3.50
94 95 2.238898 AGCCAGGACACCATTAGTAACC 59.761 50.000 0.00 0.00 0.00 2.85
95 96 3.629142 AGCCAGGACACCATTAGTAAC 57.371 47.619 0.00 0.00 0.00 2.50
96 97 5.353394 CTTAGCCAGGACACCATTAGTAA 57.647 43.478 0.00 0.00 0.00 2.24
98 99 3.914426 CTTAGCCAGGACACCATTAGT 57.086 47.619 0.00 0.00 0.00 2.24
113 114 0.107643 GTCATGAGAGGCCCCTTAGC 59.892 60.000 0.00 0.00 0.00 3.09
114 115 0.390860 CGTCATGAGAGGCCCCTTAG 59.609 60.000 0.00 0.00 0.00 2.18
115 116 0.032515 TCGTCATGAGAGGCCCCTTA 60.033 55.000 0.00 0.00 0.00 2.69
116 117 1.306141 TCGTCATGAGAGGCCCCTT 60.306 57.895 0.00 0.00 0.00 3.95
117 118 2.364560 TCGTCATGAGAGGCCCCT 59.635 61.111 0.00 0.00 0.00 4.79
353 354 4.883083 TCATCGTGTATTTCTCCATAGGC 58.117 43.478 0.00 0.00 0.00 3.93
354 355 6.591834 GGAATCATCGTGTATTTCTCCATAGG 59.408 42.308 0.00 0.00 0.00 2.57
355 356 6.309009 CGGAATCATCGTGTATTTCTCCATAG 59.691 42.308 0.00 0.00 0.00 2.23
356 357 6.156519 CGGAATCATCGTGTATTTCTCCATA 58.843 40.000 0.00 0.00 0.00 2.74
357 358 4.991056 CGGAATCATCGTGTATTTCTCCAT 59.009 41.667 0.00 0.00 0.00 3.41
358 359 4.142026 ACGGAATCATCGTGTATTTCTCCA 60.142 41.667 0.00 0.00 39.55 3.86
359 360 4.369182 ACGGAATCATCGTGTATTTCTCC 58.631 43.478 0.00 0.00 39.55 3.71
360 361 6.144080 CCTTACGGAATCATCGTGTATTTCTC 59.856 42.308 0.00 0.00 41.24 2.87
361 362 5.983720 CCTTACGGAATCATCGTGTATTTCT 59.016 40.000 0.00 0.00 41.24 2.52
362 363 5.333111 GCCTTACGGAATCATCGTGTATTTC 60.333 44.000 0.00 0.00 41.24 2.17
363 364 4.510340 GCCTTACGGAATCATCGTGTATTT 59.490 41.667 0.00 0.00 41.24 1.40
364 365 4.056050 GCCTTACGGAATCATCGTGTATT 58.944 43.478 0.00 0.00 41.24 1.89
365 366 3.321111 AGCCTTACGGAATCATCGTGTAT 59.679 43.478 0.00 0.00 41.24 2.29
366 367 2.691526 AGCCTTACGGAATCATCGTGTA 59.308 45.455 0.00 0.00 41.24 2.90
367 368 1.480954 AGCCTTACGGAATCATCGTGT 59.519 47.619 0.00 0.00 41.24 4.49
368 369 2.225068 AGCCTTACGGAATCATCGTG 57.775 50.000 0.00 0.00 41.24 4.35
369 370 2.167693 TCAAGCCTTACGGAATCATCGT 59.832 45.455 0.00 0.00 43.64 3.73
370 371 2.540101 GTCAAGCCTTACGGAATCATCG 59.460 50.000 0.00 0.00 0.00 3.84
371 372 2.540101 CGTCAAGCCTTACGGAATCATC 59.460 50.000 0.00 0.00 35.51 2.92
372 373 2.093658 ACGTCAAGCCTTACGGAATCAT 60.094 45.455 7.17 0.00 43.25 2.45
373 374 1.274167 ACGTCAAGCCTTACGGAATCA 59.726 47.619 7.17 0.00 43.25 2.57
374 375 2.005971 ACGTCAAGCCTTACGGAATC 57.994 50.000 7.17 0.00 43.25 2.52
375 376 2.231964 TGTACGTCAAGCCTTACGGAAT 59.768 45.455 0.00 0.00 43.25 3.01
376 377 1.612950 TGTACGTCAAGCCTTACGGAA 59.387 47.619 0.00 0.00 43.25 4.30
377 378 1.246649 TGTACGTCAAGCCTTACGGA 58.753 50.000 0.00 0.00 43.25 4.69
378 379 1.990563 CTTGTACGTCAAGCCTTACGG 59.009 52.381 12.60 0.00 45.37 4.02
387 388 4.039703 CGTCTTCTTGTCTTGTACGTCAA 58.960 43.478 0.00 0.00 34.61 3.18
388 389 3.549423 CCGTCTTCTTGTCTTGTACGTCA 60.549 47.826 0.00 0.00 0.00 4.35
389 390 2.978489 CCGTCTTCTTGTCTTGTACGTC 59.022 50.000 0.00 0.00 0.00 4.34
390 391 2.288030 CCCGTCTTCTTGTCTTGTACGT 60.288 50.000 0.00 0.00 0.00 3.57
391 392 2.325761 CCCGTCTTCTTGTCTTGTACG 58.674 52.381 0.00 0.00 0.00 3.67
392 393 2.036862 ACCCCGTCTTCTTGTCTTGTAC 59.963 50.000 0.00 0.00 0.00 2.90
393 394 2.298163 GACCCCGTCTTCTTGTCTTGTA 59.702 50.000 0.00 0.00 0.00 2.41
394 395 1.070289 GACCCCGTCTTCTTGTCTTGT 59.930 52.381 0.00 0.00 0.00 3.16
395 396 1.797025 GACCCCGTCTTCTTGTCTTG 58.203 55.000 0.00 0.00 0.00 3.02
396 397 0.317479 CGACCCCGTCTTCTTGTCTT 59.683 55.000 0.00 0.00 0.00 3.01
397 398 1.965219 CGACCCCGTCTTCTTGTCT 59.035 57.895 0.00 0.00 0.00 3.41
398 399 4.573162 CGACCCCGTCTTCTTGTC 57.427 61.111 0.00 0.00 0.00 3.18
408 409 0.679002 TAGAACTCTCCACGACCCCG 60.679 60.000 0.00 0.00 42.50 5.73
409 410 0.816373 GTAGAACTCTCCACGACCCC 59.184 60.000 0.00 0.00 0.00 4.95
410 411 0.816373 GGTAGAACTCTCCACGACCC 59.184 60.000 0.00 0.00 0.00 4.46
411 412 1.201880 GTGGTAGAACTCTCCACGACC 59.798 57.143 10.57 0.00 41.37 4.79
412 413 2.633199 GTGGTAGAACTCTCCACGAC 57.367 55.000 10.57 0.00 41.37 4.34
416 417 4.202641 TGTCTAAGGTGGTAGAACTCTCCA 60.203 45.833 0.00 0.00 31.94 3.86
417 418 4.342359 TGTCTAAGGTGGTAGAACTCTCC 58.658 47.826 0.00 0.00 31.94 3.71
418 419 6.238814 GCTATGTCTAAGGTGGTAGAACTCTC 60.239 46.154 0.00 0.00 31.94 3.20
419 420 5.595133 GCTATGTCTAAGGTGGTAGAACTCT 59.405 44.000 0.00 0.00 31.94 3.24
420 421 5.221283 GGCTATGTCTAAGGTGGTAGAACTC 60.221 48.000 0.00 0.00 31.94 3.01
421 422 4.650131 GGCTATGTCTAAGGTGGTAGAACT 59.350 45.833 0.00 0.00 31.94 3.01
422 423 4.499357 CGGCTATGTCTAAGGTGGTAGAAC 60.499 50.000 0.00 0.00 31.94 3.01
423 424 3.635373 CGGCTATGTCTAAGGTGGTAGAA 59.365 47.826 0.00 0.00 31.94 2.10
424 425 3.117776 TCGGCTATGTCTAAGGTGGTAGA 60.118 47.826 0.00 0.00 0.00 2.59
425 426 3.004524 GTCGGCTATGTCTAAGGTGGTAG 59.995 52.174 0.00 0.00 0.00 3.18
426 427 2.954318 GTCGGCTATGTCTAAGGTGGTA 59.046 50.000 0.00 0.00 0.00 3.25
427 428 1.755380 GTCGGCTATGTCTAAGGTGGT 59.245 52.381 0.00 0.00 0.00 4.16
428 429 1.068741 GGTCGGCTATGTCTAAGGTGG 59.931 57.143 0.00 0.00 0.00 4.61
429 430 2.032620 AGGTCGGCTATGTCTAAGGTG 58.967 52.381 0.00 0.00 0.00 4.00
430 431 2.456073 AGGTCGGCTATGTCTAAGGT 57.544 50.000 0.00 0.00 0.00 3.50
431 432 3.488363 ACTAGGTCGGCTATGTCTAAGG 58.512 50.000 0.00 0.00 0.00 2.69
432 433 4.338682 ACAACTAGGTCGGCTATGTCTAAG 59.661 45.833 0.00 0.00 0.00 2.18
433 434 4.097437 CACAACTAGGTCGGCTATGTCTAA 59.903 45.833 0.00 0.00 0.00 2.10
434 435 3.630769 CACAACTAGGTCGGCTATGTCTA 59.369 47.826 0.00 0.00 0.00 2.59
435 436 2.427453 CACAACTAGGTCGGCTATGTCT 59.573 50.000 0.00 0.00 0.00 3.41
436 437 2.165845 ACACAACTAGGTCGGCTATGTC 59.834 50.000 0.00 0.00 0.00 3.06
437 438 2.176889 ACACAACTAGGTCGGCTATGT 58.823 47.619 0.00 0.00 0.00 2.29
438 439 2.961526 ACACAACTAGGTCGGCTATG 57.038 50.000 0.00 0.00 0.00 2.23
439 440 4.382362 GGTTTACACAACTAGGTCGGCTAT 60.382 45.833 0.00 0.00 0.00 2.97
440 441 3.056607 GGTTTACACAACTAGGTCGGCTA 60.057 47.826 0.00 0.00 0.00 3.93
441 442 2.289257 GGTTTACACAACTAGGTCGGCT 60.289 50.000 0.00 0.00 0.00 5.52
442 443 2.071540 GGTTTACACAACTAGGTCGGC 58.928 52.381 0.00 0.00 0.00 5.54
443 444 2.301009 AGGGTTTACACAACTAGGTCGG 59.699 50.000 0.00 0.00 0.00 4.79
444 445 3.672767 AGGGTTTACACAACTAGGTCG 57.327 47.619 0.00 0.00 0.00 4.79
445 446 6.162079 GTCTTAGGGTTTACACAACTAGGTC 58.838 44.000 0.00 0.00 0.00 3.85
446 447 5.012458 GGTCTTAGGGTTTACACAACTAGGT 59.988 44.000 0.00 0.00 0.00 3.08
447 448 5.485620 GGTCTTAGGGTTTACACAACTAGG 58.514 45.833 0.00 0.00 0.00 3.02
448 449 5.485620 GGGTCTTAGGGTTTACACAACTAG 58.514 45.833 0.00 0.00 0.00 2.57
449 450 4.286808 GGGGTCTTAGGGTTTACACAACTA 59.713 45.833 0.00 0.00 0.00 2.24
450 451 3.073503 GGGGTCTTAGGGTTTACACAACT 59.926 47.826 0.00 0.00 0.00 3.16
451 452 3.073503 AGGGGTCTTAGGGTTTACACAAC 59.926 47.826 0.00 0.00 0.00 3.32
452 453 3.073356 CAGGGGTCTTAGGGTTTACACAA 59.927 47.826 0.00 0.00 0.00 3.33
453 454 2.640826 CAGGGGTCTTAGGGTTTACACA 59.359 50.000 0.00 0.00 0.00 3.72
454 455 2.026542 CCAGGGGTCTTAGGGTTTACAC 60.027 54.545 0.00 0.00 0.00 2.90
455 456 2.271777 CCAGGGGTCTTAGGGTTTACA 58.728 52.381 0.00 0.00 0.00 2.41
456 457 2.272698 ACCAGGGGTCTTAGGGTTTAC 58.727 52.381 0.00 0.00 0.00 2.01
457 458 2.747083 ACCAGGGGTCTTAGGGTTTA 57.253 50.000 0.00 0.00 0.00 2.01
458 459 2.747083 TACCAGGGGTCTTAGGGTTT 57.253 50.000 0.00 0.00 37.09 3.27
459 460 2.488836 CATACCAGGGGTCTTAGGGTT 58.511 52.381 0.00 0.00 37.09 4.11
460 461 1.975196 GCATACCAGGGGTCTTAGGGT 60.975 57.143 0.00 0.00 37.09 4.34
461 462 0.765510 GCATACCAGGGGTCTTAGGG 59.234 60.000 0.00 0.00 37.09 3.53
462 463 1.807814 AGCATACCAGGGGTCTTAGG 58.192 55.000 0.00 0.00 37.09 2.69
463 464 7.973048 TTATATAGCATACCAGGGGTCTTAG 57.027 40.000 0.00 0.00 37.09 2.18
464 465 7.973048 CTTATATAGCATACCAGGGGTCTTA 57.027 40.000 0.00 0.00 37.09 2.10
465 466 6.875972 CTTATATAGCATACCAGGGGTCTT 57.124 41.667 0.00 0.00 37.09 3.01
480 481 2.166664 GCCCGGTCCTCAGCTTATATAG 59.833 54.545 0.00 0.00 0.00 1.31
481 482 2.176889 GCCCGGTCCTCAGCTTATATA 58.823 52.381 0.00 0.00 0.00 0.86
482 483 0.977395 GCCCGGTCCTCAGCTTATAT 59.023 55.000 0.00 0.00 0.00 0.86
483 484 0.105658 AGCCCGGTCCTCAGCTTATA 60.106 55.000 0.00 0.00 29.27 0.98
484 485 1.383248 AGCCCGGTCCTCAGCTTAT 60.383 57.895 0.00 0.00 29.27 1.73
485 486 2.038975 AGCCCGGTCCTCAGCTTA 59.961 61.111 0.00 0.00 29.27 3.09
486 487 3.394836 GAGCCCGGTCCTCAGCTT 61.395 66.667 12.95 0.00 35.23 3.74
489 490 3.827898 GACGAGCCCGGTCCTCAG 61.828 72.222 16.70 12.27 40.78 3.35
491 492 3.711059 TAGGACGAGCCCGGTCCTC 62.711 68.421 20.48 11.02 41.72 3.71
492 493 3.717924 CTAGGACGAGCCCGGTCCT 62.718 68.421 20.63 20.63 43.49 3.85
493 494 3.217743 CTAGGACGAGCCCGGTCC 61.218 72.222 0.00 9.74 40.78 4.46
494 495 1.751927 TTCTAGGACGAGCCCGGTC 60.752 63.158 0.00 0.00 40.78 4.79
495 496 2.050934 GTTCTAGGACGAGCCCGGT 61.051 63.158 0.00 0.00 40.78 5.28
496 497 2.050350 TGTTCTAGGACGAGCCCGG 61.050 63.158 0.00 0.00 40.78 5.73
497 498 1.139095 GTGTTCTAGGACGAGCCCG 59.861 63.158 0.00 0.00 42.50 6.13
498 499 0.606604 TTGTGTTCTAGGACGAGCCC 59.393 55.000 0.00 0.00 37.37 5.19
499 500 2.450609 TTTGTGTTCTAGGACGAGCC 57.549 50.000 0.00 0.00 0.00 4.70
500 501 3.851098 AGATTTGTGTTCTAGGACGAGC 58.149 45.455 0.00 0.00 0.00 5.03
501 502 5.317733 AGAGATTTGTGTTCTAGGACGAG 57.682 43.478 0.00 0.00 0.00 4.18
502 503 5.470368 CAAGAGATTTGTGTTCTAGGACGA 58.530 41.667 0.00 0.00 0.00 4.20
503 504 4.627467 CCAAGAGATTTGTGTTCTAGGACG 59.373 45.833 0.00 0.00 0.00 4.79
504 505 5.552178 ACCAAGAGATTTGTGTTCTAGGAC 58.448 41.667 0.00 0.00 0.00 3.85
505 506 5.825593 ACCAAGAGATTTGTGTTCTAGGA 57.174 39.130 0.00 0.00 0.00 2.94
506 507 6.702329 AGTACCAAGAGATTTGTGTTCTAGG 58.298 40.000 0.00 0.00 0.00 3.02
507 508 8.499162 CAAAGTACCAAGAGATTTGTGTTCTAG 58.501 37.037 0.00 0.00 0.00 2.43
508 509 7.990886 ACAAAGTACCAAGAGATTTGTGTTCTA 59.009 33.333 6.40 0.00 41.25 2.10
509 510 6.828785 ACAAAGTACCAAGAGATTTGTGTTCT 59.171 34.615 6.40 0.00 41.25 3.01
510 511 7.027778 ACAAAGTACCAAGAGATTTGTGTTC 57.972 36.000 6.40 0.00 41.25 3.18
511 512 7.773690 AGTACAAAGTACCAAGAGATTTGTGTT 59.226 33.333 14.12 3.57 42.36 3.32
512 513 7.280356 AGTACAAAGTACCAAGAGATTTGTGT 58.720 34.615 14.12 3.03 42.36 3.72
513 514 7.730364 AGTACAAAGTACCAAGAGATTTGTG 57.270 36.000 14.12 0.00 42.36 3.33
514 515 8.621286 CAAAGTACAAAGTACCAAGAGATTTGT 58.379 33.333 10.71 10.71 44.05 2.83
515 516 8.621286 ACAAAGTACAAAGTACCAAGAGATTTG 58.379 33.333 3.85 8.38 37.00 2.32
516 517 8.747538 ACAAAGTACAAAGTACCAAGAGATTT 57.252 30.769 3.85 0.00 0.00 2.17
519 520 9.918630 GTATACAAAGTACAAAGTACCAAGAGA 57.081 33.333 0.00 0.00 0.00 3.10
520 521 9.701098 TGTATACAAAGTACAAAGTACCAAGAG 57.299 33.333 2.20 0.00 0.00 2.85
521 522 9.480053 GTGTATACAAAGTACAAAGTACCAAGA 57.520 33.333 7.25 0.00 34.15 3.02
522 523 8.715088 GGTGTATACAAAGTACAAAGTACCAAG 58.285 37.037 7.25 0.00 34.15 3.61
523 524 7.661027 GGGTGTATACAAAGTACAAAGTACCAA 59.339 37.037 7.25 0.00 34.15 3.67
524 525 7.160726 GGGTGTATACAAAGTACAAAGTACCA 58.839 38.462 7.25 0.00 34.15 3.25
525 526 6.595326 GGGGTGTATACAAAGTACAAAGTACC 59.405 42.308 7.25 0.00 34.15 3.34
526 527 7.160726 TGGGGTGTATACAAAGTACAAAGTAC 58.839 38.462 7.25 0.00 34.15 2.73
527 528 7.313740 TGGGGTGTATACAAAGTACAAAGTA 57.686 36.000 7.25 0.00 34.15 2.24
528 529 6.190346 TGGGGTGTATACAAAGTACAAAGT 57.810 37.500 7.25 0.00 34.15 2.66
529 530 6.487331 TGTTGGGGTGTATACAAAGTACAAAG 59.513 38.462 7.25 0.00 34.15 2.77
530 531 6.262720 GTGTTGGGGTGTATACAAAGTACAAA 59.737 38.462 7.25 0.00 34.15 2.83
531 532 5.764192 GTGTTGGGGTGTATACAAAGTACAA 59.236 40.000 7.25 6.41 34.15 2.41
532 533 5.163227 TGTGTTGGGGTGTATACAAAGTACA 60.163 40.000 7.25 6.13 0.00 2.90
533 534 5.307204 TGTGTTGGGGTGTATACAAAGTAC 58.693 41.667 7.25 3.65 0.00 2.73
534 535 5.563876 TGTGTTGGGGTGTATACAAAGTA 57.436 39.130 7.25 0.00 0.00 2.24
535 536 4.440826 TGTGTTGGGGTGTATACAAAGT 57.559 40.909 7.25 0.00 0.00 2.66
536 537 5.975693 ATTGTGTTGGGGTGTATACAAAG 57.024 39.130 7.25 0.00 32.58 2.77
537 538 7.834881 TTTATTGTGTTGGGGTGTATACAAA 57.165 32.000 7.25 0.00 32.58 2.83
538 539 7.524038 GCTTTTATTGTGTTGGGGTGTATACAA 60.524 37.037 7.25 0.00 33.26 2.41
539 540 6.071840 GCTTTTATTGTGTTGGGGTGTATACA 60.072 38.462 0.08 0.08 0.00 2.29
540 541 6.071840 TGCTTTTATTGTGTTGGGGTGTATAC 60.072 38.462 0.00 0.00 0.00 1.47
541 542 6.010850 TGCTTTTATTGTGTTGGGGTGTATA 58.989 36.000 0.00 0.00 0.00 1.47
542 543 4.835615 TGCTTTTATTGTGTTGGGGTGTAT 59.164 37.500 0.00 0.00 0.00 2.29
543 544 4.215908 TGCTTTTATTGTGTTGGGGTGTA 58.784 39.130 0.00 0.00 0.00 2.90
544 545 3.034635 TGCTTTTATTGTGTTGGGGTGT 58.965 40.909 0.00 0.00 0.00 4.16
545 546 3.742433 TGCTTTTATTGTGTTGGGGTG 57.258 42.857 0.00 0.00 0.00 4.61
546 547 4.407296 TCTTTGCTTTTATTGTGTTGGGGT 59.593 37.500 0.00 0.00 0.00 4.95
547 548 4.954875 TCTTTGCTTTTATTGTGTTGGGG 58.045 39.130 0.00 0.00 0.00 4.96
548 549 4.448732 GCTCTTTGCTTTTATTGTGTTGGG 59.551 41.667 0.00 0.00 38.95 4.12
549 550 5.049167 TGCTCTTTGCTTTTATTGTGTTGG 58.951 37.500 0.00 0.00 43.37 3.77
550 551 5.176223 CCTGCTCTTTGCTTTTATTGTGTTG 59.824 40.000 0.00 0.00 43.37 3.33
551 552 5.291971 CCTGCTCTTTGCTTTTATTGTGTT 58.708 37.500 0.00 0.00 43.37 3.32
552 553 4.262164 CCCTGCTCTTTGCTTTTATTGTGT 60.262 41.667 0.00 0.00 43.37 3.72
553 554 4.240096 CCCTGCTCTTTGCTTTTATTGTG 58.760 43.478 0.00 0.00 43.37 3.33
554 555 3.897505 ACCCTGCTCTTTGCTTTTATTGT 59.102 39.130 0.00 0.00 43.37 2.71
555 556 4.240096 CACCCTGCTCTTTGCTTTTATTG 58.760 43.478 0.00 0.00 43.37 1.90
556 557 3.897505 ACACCCTGCTCTTTGCTTTTATT 59.102 39.130 0.00 0.00 43.37 1.40
557 558 3.500343 ACACCCTGCTCTTTGCTTTTAT 58.500 40.909 0.00 0.00 43.37 1.40
558 559 2.944129 ACACCCTGCTCTTTGCTTTTA 58.056 42.857 0.00 0.00 43.37 1.52
559 560 1.780503 ACACCCTGCTCTTTGCTTTT 58.219 45.000 0.00 0.00 43.37 2.27
560 561 2.508526 CTACACCCTGCTCTTTGCTTT 58.491 47.619 0.00 0.00 43.37 3.51
561 562 1.271597 CCTACACCCTGCTCTTTGCTT 60.272 52.381 0.00 0.00 43.37 3.91
562 563 0.326264 CCTACACCCTGCTCTTTGCT 59.674 55.000 0.00 0.00 43.37 3.91
563 564 0.324943 TCCTACACCCTGCTCTTTGC 59.675 55.000 0.00 0.00 43.25 3.68
564 565 2.503356 AGATCCTACACCCTGCTCTTTG 59.497 50.000 0.00 0.00 0.00 2.77
565 566 2.839228 AGATCCTACACCCTGCTCTTT 58.161 47.619 0.00 0.00 0.00 2.52
566 567 2.559381 AGATCCTACACCCTGCTCTT 57.441 50.000 0.00 0.00 0.00 2.85
567 568 2.292521 TGAAGATCCTACACCCTGCTCT 60.293 50.000 0.00 0.00 0.00 4.09
568 569 2.111384 TGAAGATCCTACACCCTGCTC 58.889 52.381 0.00 0.00 0.00 4.26
569 570 1.834263 GTGAAGATCCTACACCCTGCT 59.166 52.381 0.00 0.00 0.00 4.24
570 571 1.134371 GGTGAAGATCCTACACCCTGC 60.134 57.143 17.39 0.00 45.53 4.85
571 572 2.990066 GGTGAAGATCCTACACCCTG 57.010 55.000 17.39 0.00 45.53 4.45
575 576 2.753452 TCTCACGGTGAAGATCCTACAC 59.247 50.000 12.54 6.13 0.00 2.90
576 577 3.017442 CTCTCACGGTGAAGATCCTACA 58.983 50.000 12.54 0.00 0.00 2.74
577 578 2.223618 GCTCTCACGGTGAAGATCCTAC 60.224 54.545 12.54 0.00 0.00 3.18
578 579 2.025155 GCTCTCACGGTGAAGATCCTA 58.975 52.381 12.54 0.00 0.00 2.94
579 580 0.820871 GCTCTCACGGTGAAGATCCT 59.179 55.000 12.54 0.00 0.00 3.24
580 581 0.179097 GGCTCTCACGGTGAAGATCC 60.179 60.000 12.54 12.06 0.00 3.36
581 582 0.179097 GGGCTCTCACGGTGAAGATC 60.179 60.000 12.54 7.41 0.00 2.75
582 583 1.901085 GGGCTCTCACGGTGAAGAT 59.099 57.895 12.54 0.00 0.00 2.40
583 584 2.636412 CGGGCTCTCACGGTGAAGA 61.636 63.158 12.54 10.45 0.00 2.87
584 585 2.125912 CGGGCTCTCACGGTGAAG 60.126 66.667 12.54 12.72 0.00 3.02
585 586 2.204461 TTCGGGCTCTCACGGTGAA 61.204 57.895 12.54 2.95 0.00 3.18
586 587 2.599281 TTCGGGCTCTCACGGTGA 60.599 61.111 10.88 10.88 0.00 4.02
587 588 2.432628 GTTCGGGCTCTCACGGTG 60.433 66.667 0.56 0.56 0.00 4.94
588 589 3.692406 GGTTCGGGCTCTCACGGT 61.692 66.667 0.00 0.00 0.00 4.83
589 590 3.382832 AGGTTCGGGCTCTCACGG 61.383 66.667 0.00 0.00 0.00 4.94
590 591 2.125912 CAGGTTCGGGCTCTCACG 60.126 66.667 0.00 0.00 0.00 4.35
591 592 1.216710 CTCAGGTTCGGGCTCTCAC 59.783 63.158 0.00 0.00 0.00 3.51
592 593 0.039180 TACTCAGGTTCGGGCTCTCA 59.961 55.000 0.00 0.00 0.00 3.27
593 594 1.183549 TTACTCAGGTTCGGGCTCTC 58.816 55.000 0.00 0.00 0.00 3.20
594 595 1.640917 TTTACTCAGGTTCGGGCTCT 58.359 50.000 0.00 0.00 0.00 4.09
595 596 2.467566 TTTTACTCAGGTTCGGGCTC 57.532 50.000 0.00 0.00 0.00 4.70
596 597 2.501261 GTTTTTACTCAGGTTCGGGCT 58.499 47.619 0.00 0.00 0.00 5.19
597 598 1.538512 GGTTTTTACTCAGGTTCGGGC 59.461 52.381 0.00 0.00 0.00 6.13
598 599 2.156917 GGGTTTTTACTCAGGTTCGGG 58.843 52.381 0.00 0.00 0.00 5.14
599 600 3.136009 AGGGTTTTTACTCAGGTTCGG 57.864 47.619 0.00 0.00 0.00 4.30
600 601 3.881089 ACAAGGGTTTTTACTCAGGTTCG 59.119 43.478 0.00 0.00 0.00 3.95
601 602 4.277672 GGACAAGGGTTTTTACTCAGGTTC 59.722 45.833 0.00 0.00 0.00 3.62
602 603 4.079385 AGGACAAGGGTTTTTACTCAGGTT 60.079 41.667 0.00 0.00 0.00 3.50
603 604 3.462205 AGGACAAGGGTTTTTACTCAGGT 59.538 43.478 0.00 0.00 0.00 4.00
604 605 4.100279 AGGACAAGGGTTTTTACTCAGG 57.900 45.455 0.00 0.00 0.00 3.86
605 606 4.887655 ACAAGGACAAGGGTTTTTACTCAG 59.112 41.667 0.00 0.00 0.00 3.35
606 607 4.862371 ACAAGGACAAGGGTTTTTACTCA 58.138 39.130 0.00 0.00 0.00 3.41
607 608 5.847111 AACAAGGACAAGGGTTTTTACTC 57.153 39.130 0.00 0.00 0.00 2.59
608 609 5.595542 GGTAACAAGGACAAGGGTTTTTACT 59.404 40.000 0.00 0.00 0.00 2.24
609 610 5.835257 GGTAACAAGGACAAGGGTTTTTAC 58.165 41.667 0.00 0.00 0.00 2.01
627 628 1.949465 CTACTTGGCGGGATGGTAAC 58.051 55.000 0.00 0.00 0.00 2.50
628 629 0.179468 GCTACTTGGCGGGATGGTAA 59.821 55.000 0.00 0.00 0.00 2.85
629 630 1.692173 GGCTACTTGGCGGGATGGTA 61.692 60.000 0.00 0.00 0.00 3.25
630 631 2.590092 GCTACTTGGCGGGATGGT 59.410 61.111 0.00 0.00 0.00 3.55
631 632 1.407656 TAGGCTACTTGGCGGGATGG 61.408 60.000 0.00 0.00 46.88 3.51
632 633 0.468226 TTAGGCTACTTGGCGGGATG 59.532 55.000 0.00 0.00 46.88 3.51
633 634 1.435256 ATTAGGCTACTTGGCGGGAT 58.565 50.000 0.00 0.00 46.88 3.85
634 635 1.140252 GAATTAGGCTACTTGGCGGGA 59.860 52.381 1.44 0.00 46.88 5.14
635 636 1.594331 GAATTAGGCTACTTGGCGGG 58.406 55.000 1.44 0.00 46.88 6.13
636 637 1.594331 GGAATTAGGCTACTTGGCGG 58.406 55.000 1.44 0.00 46.88 6.13
637 638 1.202486 TCGGAATTAGGCTACTTGGCG 60.202 52.381 1.44 0.00 46.88 5.69
638 639 2.614829 TCGGAATTAGGCTACTTGGC 57.385 50.000 1.44 0.00 42.15 4.52
639 640 4.562963 GGGTATCGGAATTAGGCTACTTGG 60.563 50.000 1.44 0.00 0.00 3.61
640 641 4.283722 AGGGTATCGGAATTAGGCTACTTG 59.716 45.833 1.44 0.00 0.00 3.16
641 642 4.490706 AGGGTATCGGAATTAGGCTACTT 58.509 43.478 0.00 0.00 0.00 2.24
642 643 4.129317 AGGGTATCGGAATTAGGCTACT 57.871 45.455 0.00 0.00 0.00 2.57
643 644 4.159321 GGTAGGGTATCGGAATTAGGCTAC 59.841 50.000 0.00 0.00 0.00 3.58
644 645 4.202706 TGGTAGGGTATCGGAATTAGGCTA 60.203 45.833 0.00 0.00 0.00 3.93
645 646 3.171528 GGTAGGGTATCGGAATTAGGCT 58.828 50.000 0.00 0.00 0.00 4.58
646 647 2.901839 TGGTAGGGTATCGGAATTAGGC 59.098 50.000 0.00 0.00 0.00 3.93
647 648 4.020485 CCTTGGTAGGGTATCGGAATTAGG 60.020 50.000 0.00 0.00 37.94 2.69
648 649 4.591924 ACCTTGGTAGGGTATCGGAATTAG 59.408 45.833 0.00 0.00 46.58 1.73
649 650 4.559726 ACCTTGGTAGGGTATCGGAATTA 58.440 43.478 0.00 0.00 46.58 1.40
650 651 3.390819 ACCTTGGTAGGGTATCGGAATT 58.609 45.455 0.00 0.00 46.58 2.17
651 652 3.056201 ACCTTGGTAGGGTATCGGAAT 57.944 47.619 0.00 0.00 46.58 3.01
652 653 2.555732 ACCTTGGTAGGGTATCGGAA 57.444 50.000 0.00 0.00 46.58 4.30
653 654 3.909427 ATACCTTGGTAGGGTATCGGA 57.091 47.619 5.71 0.00 44.04 4.55
658 659 4.231195 TCAGACAGATACCTTGGTAGGGTA 59.769 45.833 5.71 0.00 46.58 3.69
659 660 3.012502 TCAGACAGATACCTTGGTAGGGT 59.987 47.826 5.71 3.65 46.58 4.34
660 661 3.643237 TCAGACAGATACCTTGGTAGGG 58.357 50.000 5.71 0.73 46.58 3.53
661 662 5.878406 AATCAGACAGATACCTTGGTAGG 57.122 43.478 5.71 0.00 41.05 3.18
662 663 6.926272 GCTAAATCAGACAGATACCTTGGTAG 59.074 42.308 5.71 0.00 35.39 3.18
663 664 6.611642 AGCTAAATCAGACAGATACCTTGGTA 59.388 38.462 1.65 1.65 35.39 3.25
664 665 5.426833 AGCTAAATCAGACAGATACCTTGGT 59.573 40.000 0.00 0.00 35.39 3.67
665 666 5.923204 AGCTAAATCAGACAGATACCTTGG 58.077 41.667 0.00 0.00 35.39 3.61
666 667 6.700960 CAGAGCTAAATCAGACAGATACCTTG 59.299 42.308 0.00 0.00 35.39 3.61
667 668 6.609212 TCAGAGCTAAATCAGACAGATACCTT 59.391 38.462 0.00 0.00 35.39 3.50
668 669 6.132658 TCAGAGCTAAATCAGACAGATACCT 58.867 40.000 0.00 0.00 35.39 3.08
669 670 6.398234 TCAGAGCTAAATCAGACAGATACC 57.602 41.667 0.00 0.00 35.39 2.73
687 688 1.476085 CCTCGGCATAGGCTATCAGAG 59.524 57.143 18.10 18.10 40.87 3.35
688 689 1.075536 TCCTCGGCATAGGCTATCAGA 59.924 52.381 3.47 5.54 40.87 3.27
689 690 1.203523 GTCCTCGGCATAGGCTATCAG 59.796 57.143 3.47 1.45 40.87 2.90
690 691 1.257743 GTCCTCGGCATAGGCTATCA 58.742 55.000 3.47 0.00 40.87 2.15
691 692 0.533032 GGTCCTCGGCATAGGCTATC 59.467 60.000 3.47 0.00 40.87 2.08
692 693 0.178932 TGGTCCTCGGCATAGGCTAT 60.179 55.000 0.00 0.00 40.87 2.97
693 694 1.113517 GTGGTCCTCGGCATAGGCTA 61.114 60.000 0.00 0.00 40.87 3.93
694 695 2.041922 TGGTCCTCGGCATAGGCT 60.042 61.111 0.00 0.00 40.87 4.58
695 696 2.109181 GTGGTCCTCGGCATAGGC 59.891 66.667 0.00 0.00 36.51 3.93
696 697 2.822399 GGTGGTCCTCGGCATAGG 59.178 66.667 0.00 0.00 38.06 2.57
697 698 2.417516 CGGTGGTCCTCGGCATAG 59.582 66.667 0.00 0.00 0.00 2.23
698 699 3.845259 GCGGTGGTCCTCGGCATA 61.845 66.667 16.18 0.00 0.00 3.14
715 716 3.612247 CTTGGGGTCTCGGGTGCAG 62.612 68.421 0.00 0.00 0.00 4.41
716 717 3.636231 CTTGGGGTCTCGGGTGCA 61.636 66.667 0.00 0.00 0.00 4.57
717 718 3.316573 CTCTTGGGGTCTCGGGTGC 62.317 68.421 0.00 0.00 0.00 5.01
718 719 2.660064 CCTCTTGGGGTCTCGGGTG 61.660 68.421 0.00 0.00 0.00 4.61
719 720 2.284699 CCTCTTGGGGTCTCGGGT 60.285 66.667 0.00 0.00 0.00 5.28
720 721 1.612442 TTCCTCTTGGGGTCTCGGG 60.612 63.158 0.00 0.00 35.33 5.14
721 722 1.901085 CTTCCTCTTGGGGTCTCGG 59.099 63.158 0.00 0.00 35.33 4.63
722 723 1.219393 GCTTCCTCTTGGGGTCTCG 59.781 63.158 0.00 0.00 35.33 4.04
723 724 1.219393 CGCTTCCTCTTGGGGTCTC 59.781 63.158 0.00 0.00 35.33 3.36
724 725 2.294078 CCGCTTCCTCTTGGGGTCT 61.294 63.158 0.00 0.00 35.33 3.85
725 726 2.269241 CCGCTTCCTCTTGGGGTC 59.731 66.667 0.00 0.00 35.33 4.46
726 727 4.035102 GCCGCTTCCTCTTGGGGT 62.035 66.667 0.00 0.00 38.37 4.95
727 728 4.803908 GGCCGCTTCCTCTTGGGG 62.804 72.222 0.00 0.00 39.01 4.96
741 742 2.879813 TTACCATTTCCTCGCCGGCC 62.880 60.000 23.46 2.84 0.00 6.13
742 743 1.027792 TTTACCATTTCCTCGCCGGC 61.028 55.000 19.07 19.07 0.00 6.13
743 744 0.730840 GTTTACCATTTCCTCGCCGG 59.269 55.000 0.00 0.00 0.00 6.13
744 745 1.734163 AGTTTACCATTTCCTCGCCG 58.266 50.000 0.00 0.00 0.00 6.46
745 746 3.078837 TGAAGTTTACCATTTCCTCGCC 58.921 45.455 0.00 0.00 0.00 5.54
746 747 4.473199 GTTGAAGTTTACCATTTCCTCGC 58.527 43.478 0.00 0.00 0.00 5.03
747 748 4.378046 CGGTTGAAGTTTACCATTTCCTCG 60.378 45.833 8.35 0.00 33.94 4.63
748 749 4.082949 CCGGTTGAAGTTTACCATTTCCTC 60.083 45.833 0.00 0.00 33.94 3.71
749 750 3.824443 CCGGTTGAAGTTTACCATTTCCT 59.176 43.478 0.00 0.00 33.94 3.36
750 751 3.613193 GCCGGTTGAAGTTTACCATTTCC 60.613 47.826 1.90 0.00 33.94 3.13
751 752 3.254903 AGCCGGTTGAAGTTTACCATTTC 59.745 43.478 1.90 0.00 33.94 2.17
752 753 3.227614 AGCCGGTTGAAGTTTACCATTT 58.772 40.909 1.90 0.00 33.94 2.32
753 754 2.871453 AGCCGGTTGAAGTTTACCATT 58.129 42.857 1.90 0.00 33.94 3.16
754 755 2.579410 AGCCGGTTGAAGTTTACCAT 57.421 45.000 1.90 0.00 33.94 3.55
755 756 2.351706 AAGCCGGTTGAAGTTTACCA 57.648 45.000 1.90 0.00 33.94 3.25
756 757 3.720949 AAAAGCCGGTTGAAGTTTACC 57.279 42.857 1.90 0.00 0.00 2.85
798 799 9.706691 CAGAGTTCATCACTTAACTAAAACCTA 57.293 33.333 0.00 0.00 36.10 3.08
799 800 7.661847 CCAGAGTTCATCACTTAACTAAAACCT 59.338 37.037 0.00 0.00 36.10 3.50
800 801 7.444487 ACCAGAGTTCATCACTTAACTAAAACC 59.556 37.037 0.00 0.00 36.10 3.27
801 802 8.379457 ACCAGAGTTCATCACTTAACTAAAAC 57.621 34.615 0.00 0.00 36.10 2.43
803 804 9.485206 GTTACCAGAGTTCATCACTTAACTAAA 57.515 33.333 0.00 0.00 36.10 1.85
804 805 8.867097 AGTTACCAGAGTTCATCACTTAACTAA 58.133 33.333 0.00 0.00 36.10 2.24
805 806 8.418597 AGTTACCAGAGTTCATCACTTAACTA 57.581 34.615 0.00 0.00 36.10 2.24
806 807 7.304497 AGTTACCAGAGTTCATCACTTAACT 57.696 36.000 0.00 0.00 38.62 2.24
807 808 7.964604 AAGTTACCAGAGTTCATCACTTAAC 57.035 36.000 0.00 0.00 35.01 2.01
808 809 8.974060 AAAAGTTACCAGAGTTCATCACTTAA 57.026 30.769 0.00 0.00 35.01 1.85
809 810 8.974060 AAAAAGTTACCAGAGTTCATCACTTA 57.026 30.769 0.00 0.00 35.01 2.24
810 811 7.881775 AAAAAGTTACCAGAGTTCATCACTT 57.118 32.000 0.00 0.00 35.01 3.16
833 834 9.607988 TCAAGTTTTAGTACAGTCTGATTCAAA 57.392 29.630 6.91 0.00 0.00 2.69
834 835 9.778741 ATCAAGTTTTAGTACAGTCTGATTCAA 57.221 29.630 6.91 0.00 0.00 2.69
838 839 9.319143 GCATATCAAGTTTTAGTACAGTCTGAT 57.681 33.333 6.91 0.00 0.00 2.90
839 840 8.531982 AGCATATCAAGTTTTAGTACAGTCTGA 58.468 33.333 6.91 0.00 0.00 3.27
840 841 8.709386 AGCATATCAAGTTTTAGTACAGTCTG 57.291 34.615 0.00 0.00 0.00 3.51
854 855 9.182214 ACTGATTCAAAACATAGCATATCAAGT 57.818 29.630 0.00 0.00 0.00 3.16
855 856 9.447040 CACTGATTCAAAACATAGCATATCAAG 57.553 33.333 0.00 0.00 0.00 3.02
856 857 8.407832 CCACTGATTCAAAACATAGCATATCAA 58.592 33.333 0.00 0.00 0.00 2.57
857 858 7.557358 ACCACTGATTCAAAACATAGCATATCA 59.443 33.333 0.00 0.00 0.00 2.15
858 859 7.934457 ACCACTGATTCAAAACATAGCATATC 58.066 34.615 0.00 0.00 0.00 1.63
859 860 7.886629 ACCACTGATTCAAAACATAGCATAT 57.113 32.000 0.00 0.00 0.00 1.78
860 861 8.800370 TTACCACTGATTCAAAACATAGCATA 57.200 30.769 0.00 0.00 0.00 3.14
861 862 7.701539 TTACCACTGATTCAAAACATAGCAT 57.298 32.000 0.00 0.00 0.00 3.79
862 863 7.230510 AGTTTACCACTGATTCAAAACATAGCA 59.769 33.333 11.48 0.00 32.83 3.49
863 864 7.593825 AGTTTACCACTGATTCAAAACATAGC 58.406 34.615 11.48 0.00 32.83 2.97
864 865 9.965824 AAAGTTTACCACTGATTCAAAACATAG 57.034 29.630 11.48 0.00 35.12 2.23
876 877 9.059260 GGTGTTCTAATTAAAGTTTACCACTGA 57.941 33.333 0.00 0.00 35.12 3.41
877 878 8.842280 TGGTGTTCTAATTAAAGTTTACCACTG 58.158 33.333 0.00 0.00 35.12 3.66
878 879 8.983702 TGGTGTTCTAATTAAAGTTTACCACT 57.016 30.769 0.00 0.00 37.30 4.00
894 895 9.183368 TGCATCAAATTGTATATTGGTGTTCTA 57.817 29.630 1.31 0.00 39.34 2.10
895 896 8.065473 TGCATCAAATTGTATATTGGTGTTCT 57.935 30.769 1.31 0.00 39.34 3.01
896 897 8.876275 ATGCATCAAATTGTATATTGGTGTTC 57.124 30.769 0.00 0.00 39.34 3.18
908 909 8.456471 CCATCTCGATTATATGCATCAAATTGT 58.544 33.333 0.19 0.00 0.00 2.71
909 910 8.456471 ACCATCTCGATTATATGCATCAAATTG 58.544 33.333 0.19 8.53 0.00 2.32
910 911 8.571461 ACCATCTCGATTATATGCATCAAATT 57.429 30.769 0.19 0.00 0.00 1.82
911 912 9.671279 TTACCATCTCGATTATATGCATCAAAT 57.329 29.630 0.19 4.11 0.00 2.32
912 913 9.500785 TTTACCATCTCGATTATATGCATCAAA 57.499 29.630 0.19 0.00 0.00 2.69
913 914 9.500785 TTTTACCATCTCGATTATATGCATCAA 57.499 29.630 0.19 0.00 0.00 2.57
914 915 8.935844 GTTTTACCATCTCGATTATATGCATCA 58.064 33.333 0.19 0.00 0.00 3.07
915 916 8.391106 GGTTTTACCATCTCGATTATATGCATC 58.609 37.037 0.19 0.00 38.42 3.91
916 917 7.064609 CGGTTTTACCATCTCGATTATATGCAT 59.935 37.037 3.79 3.79 38.47 3.96
917 918 6.367695 CGGTTTTACCATCTCGATTATATGCA 59.632 38.462 0.00 0.00 38.47 3.96
918 919 6.672357 GCGGTTTTACCATCTCGATTATATGC 60.672 42.308 0.00 0.00 38.47 3.14
919 920 6.367695 TGCGGTTTTACCATCTCGATTATATG 59.632 38.462 0.00 0.00 38.47 1.78
920 921 6.460781 TGCGGTTTTACCATCTCGATTATAT 58.539 36.000 0.00 0.00 38.47 0.86
921 922 5.845103 TGCGGTTTTACCATCTCGATTATA 58.155 37.500 0.00 0.00 38.47 0.98
922 923 4.699637 TGCGGTTTTACCATCTCGATTAT 58.300 39.130 0.00 0.00 38.47 1.28
923 924 4.126208 TGCGGTTTTACCATCTCGATTA 57.874 40.909 0.00 0.00 38.47 1.75
924 925 2.980568 TGCGGTTTTACCATCTCGATT 58.019 42.857 0.00 0.00 38.47 3.34
925 926 2.684001 TGCGGTTTTACCATCTCGAT 57.316 45.000 0.00 0.00 38.47 3.59
926 927 2.684001 ATGCGGTTTTACCATCTCGA 57.316 45.000 0.00 0.00 38.47 4.04
927 928 4.272504 ACATTATGCGGTTTTACCATCTCG 59.727 41.667 0.00 0.00 38.47 4.04
928 929 5.277828 GGACATTATGCGGTTTTACCATCTC 60.278 44.000 0.00 0.00 38.47 2.75
929 930 4.578928 GGACATTATGCGGTTTTACCATCT 59.421 41.667 0.00 0.00 38.47 2.90
930 931 4.578928 AGGACATTATGCGGTTTTACCATC 59.421 41.667 0.00 0.00 38.47 3.51
931 932 4.532834 AGGACATTATGCGGTTTTACCAT 58.467 39.130 0.00 0.00 38.47 3.55
932 933 3.942748 GAGGACATTATGCGGTTTTACCA 59.057 43.478 0.00 0.00 38.47 3.25
933 934 3.001939 CGAGGACATTATGCGGTTTTACC 59.998 47.826 0.00 0.00 34.05 2.85
934 935 3.619929 ACGAGGACATTATGCGGTTTTAC 59.380 43.478 0.00 0.00 0.00 2.01
935 936 3.864243 ACGAGGACATTATGCGGTTTTA 58.136 40.909 0.00 0.00 0.00 1.52
936 937 2.676342 GACGAGGACATTATGCGGTTTT 59.324 45.455 0.00 0.00 0.00 2.43
937 938 2.277084 GACGAGGACATTATGCGGTTT 58.723 47.619 0.00 0.00 0.00 3.27
938 939 1.801395 CGACGAGGACATTATGCGGTT 60.801 52.381 0.00 0.00 0.00 4.44
939 940 0.248907 CGACGAGGACATTATGCGGT 60.249 55.000 0.00 0.00 0.00 5.68
940 941 0.939577 CCGACGAGGACATTATGCGG 60.940 60.000 0.00 0.00 45.00 5.69
941 942 0.030235 TCCGACGAGGACATTATGCG 59.970 55.000 0.00 0.00 45.98 4.73
942 943 1.337071 TCTCCGACGAGGACATTATGC 59.663 52.381 0.00 0.00 45.98 3.14
943 944 2.357952 TGTCTCCGACGAGGACATTATG 59.642 50.000 15.24 0.00 45.98 1.90
944 945 2.619177 CTGTCTCCGACGAGGACATTAT 59.381 50.000 18.05 0.00 45.98 1.28
945 946 2.014857 CTGTCTCCGACGAGGACATTA 58.985 52.381 18.05 2.56 45.98 1.90
946 947 0.811915 CTGTCTCCGACGAGGACATT 59.188 55.000 18.05 0.00 45.98 2.71
947 948 1.658686 GCTGTCTCCGACGAGGACAT 61.659 60.000 18.05 0.00 45.98 3.06
948 949 2.333417 GCTGTCTCCGACGAGGACA 61.333 63.158 17.20 17.20 45.98 4.02
949 950 2.041686 AGCTGTCTCCGACGAGGAC 61.042 63.158 0.00 4.84 45.98 3.85
951 952 1.987704 CTCAGCTGTCTCCGACGAGG 61.988 65.000 14.67 0.00 42.97 4.63
952 953 1.427419 CTCAGCTGTCTCCGACGAG 59.573 63.158 14.67 0.00 34.95 4.18
957 958 2.125753 GTGGCTCAGCTGTCTCCG 60.126 66.667 14.67 0.00 0.00 4.63
963 964 1.521010 CGGAGATGTGGCTCAGCTG 60.521 63.158 12.49 7.63 43.25 4.24
1001 1002 2.022035 AGGAGGAGAGAGAGAGGAGAGA 60.022 54.545 0.00 0.00 0.00 3.10
1007 1008 4.202441 CAAGAAGAGGAGGAGAGAGAGAG 58.798 52.174 0.00 0.00 0.00 3.20
1008 1009 3.053693 CCAAGAAGAGGAGGAGAGAGAGA 60.054 52.174 0.00 0.00 0.00 3.10
1009 1010 3.290710 CCAAGAAGAGGAGGAGAGAGAG 58.709 54.545 0.00 0.00 0.00 3.20
1344 1345 5.659525 TGAAAATATCTCAGAACCGGGTAGA 59.340 40.000 6.32 0.00 0.00 2.59
1368 1369 4.776349 TGCCGACCATACAGTTGAATAAT 58.224 39.130 0.00 0.00 0.00 1.28
1371 1372 2.779755 TGCCGACCATACAGTTGAAT 57.220 45.000 0.00 0.00 0.00 2.57
1379 1380 5.106078 TGGAAAATAAACTTGCCGACCATAC 60.106 40.000 0.00 0.00 0.00 2.39
1380 1381 5.010933 TGGAAAATAAACTTGCCGACCATA 58.989 37.500 0.00 0.00 0.00 2.74
1381 1382 3.829601 TGGAAAATAAACTTGCCGACCAT 59.170 39.130 0.00 0.00 0.00 3.55
1382 1383 3.223435 TGGAAAATAAACTTGCCGACCA 58.777 40.909 0.00 0.00 0.00 4.02
1458 1460 2.228822 GGAGTGGTGTTTAAGTGGCATG 59.771 50.000 0.00 0.00 0.00 4.06
1470 1472 1.538047 GCACAATCATGGAGTGGTGT 58.462 50.000 12.68 0.00 31.53 4.16
1486 1488 4.005650 TCATCTCTTTCTCATTGTGGCAC 58.994 43.478 11.55 11.55 0.00 5.01
1559 1561 5.061853 GCTGATAGGCATGATCTTTTCAGA 58.938 41.667 20.40 0.00 37.89 3.27
1600 1602 1.067582 CGGGCACGGTAGAATCTCC 59.932 63.158 0.00 0.00 36.18 3.71
1611 1614 1.095228 ATAATGTTGAGCCGGGCACG 61.095 55.000 23.09 0.00 40.55 5.34
1615 1618 2.159254 CCACAAATAATGTTGAGCCGGG 60.159 50.000 2.18 0.00 41.46 5.73
1771 1776 0.676736 GGCAGGGGATAGAAGAGACG 59.323 60.000 0.00 0.00 0.00 4.18
1839 1846 4.803613 GGTGATTCCAAAGTTTGTGTCAAC 59.196 41.667 14.36 12.85 35.97 3.18
2060 2307 2.543430 CACAATTTCCGTGCCCAAAAAG 59.457 45.455 0.00 0.00 0.00 2.27
2075 2322 0.744414 CGTCCGCTCATCCCACAATT 60.744 55.000 0.00 0.00 0.00 2.32
2113 2360 4.211164 CACGAGATTGTTGTTTCTACTGCA 59.789 41.667 0.00 0.00 0.00 4.41
2114 2361 4.377431 CCACGAGATTGTTGTTTCTACTGC 60.377 45.833 0.00 0.00 0.00 4.40
2164 2411 7.057402 CGTTTTCTAGAACATATGCACGTATG 58.943 38.462 4.18 8.07 37.92 2.39
2435 2682 9.976511 ATTCAATTTTATGATGACATGATGGAC 57.023 29.630 0.00 0.00 37.87 4.02
2505 2752 8.854117 AGATAATATCTTTGTTTTCTCCATGGC 58.146 33.333 6.96 0.00 35.76 4.40
2537 2784 8.060090 CCAAACGCTTTCTATTACCTATTTACG 58.940 37.037 0.00 0.00 0.00 3.18
2548 2797 9.139174 CATAATTTTGACCAAACGCTTTCTATT 57.861 29.630 0.00 0.00 0.00 1.73
2562 2811 8.793592 AGGTCTCAAAGTTACATAATTTTGACC 58.206 33.333 14.72 15.15 42.81 4.02
2777 5600 4.403734 TGTTACTCCCTCCATTCCAAAAC 58.596 43.478 0.00 0.00 0.00 2.43
2786 5609 4.993705 ACTTTGAATGTTACTCCCTCCA 57.006 40.909 0.00 0.00 0.00 3.86
2803 5626 3.258372 TGAGGTCTGATCGCTACAACTTT 59.742 43.478 0.00 0.00 0.00 2.66
2804 5627 2.826128 TGAGGTCTGATCGCTACAACTT 59.174 45.455 0.00 0.00 0.00 2.66
2805 5628 2.447443 TGAGGTCTGATCGCTACAACT 58.553 47.619 0.00 0.00 0.00 3.16
3124 5976 4.433615 ACTCTCTATGTGTTACATTGCCG 58.566 43.478 0.00 0.00 39.88 5.69
3613 6494 2.565841 AGGTTGTGTGAGCTCTTGAAC 58.434 47.619 16.19 11.71 0.00 3.18
3852 6770 2.730382 TGCTAGTAGACGTGGATTGGA 58.270 47.619 0.00 0.00 0.00 3.53
4021 6946 9.434275 TTGATCATACCTCTTTTACTATCCAGA 57.566 33.333 0.00 0.00 0.00 3.86
5743 8878 8.722480 TTCTTATCAAGTGATGAAACGATGAT 57.278 30.769 4.00 0.00 42.54 2.45
5746 8881 8.722480 TGATTCTTATCAAGTGATGAAACGAT 57.278 30.769 4.00 0.00 42.54 3.73
5766 8902 6.862944 TTTCGCGGTTTTCATATTTGATTC 57.137 33.333 6.13 0.00 0.00 2.52
5842 8981 6.289745 AGCATATTTTATTGCATTTTGGCG 57.710 33.333 0.00 0.00 41.35 5.69
6009 9149 3.130693 GTCTAGGTGTACGATTCTTGCCT 59.869 47.826 0.00 0.00 0.00 4.75
6023 9163 1.835494 TCACTCCTTCCGTCTAGGTG 58.165 55.000 0.00 0.00 41.99 4.00
6042 9182 3.440173 CGGATAGTGGTGCTTCAATGTTT 59.560 43.478 0.00 0.00 0.00 2.83
6056 9196 7.437267 ACTCGTTTAATGGAAATACGGATAGTG 59.563 37.037 0.00 0.00 0.00 2.74
6072 9212 9.646336 GAACGATATGCAAAATACTCGTTTAAT 57.354 29.630 16.62 2.27 45.88 1.40
6098 9238 2.288961 AGGTGTATAAACGCTGACGG 57.711 50.000 0.00 0.00 46.04 4.79
6139 9280 8.999431 TGGTGAGAAAAGTATAATTGTTCAGTC 58.001 33.333 9.10 2.86 0.00 3.51
6342 9483 2.710377 TGACGCCTTACCGAGTTAGTA 58.290 47.619 0.00 0.00 0.00 1.82
6343 9484 1.538047 TGACGCCTTACCGAGTTAGT 58.462 50.000 0.00 0.00 0.00 2.24
6378 9535 2.490148 CCTCGATCAGCTACGGGCA 61.490 63.158 5.51 0.00 44.79 5.36
6388 9545 1.550130 GGGTCCAACCACCTCGATCA 61.550 60.000 0.00 0.00 41.02 2.92
6400 9557 1.976474 GCTGCCGAATTGGGTCCAA 60.976 57.895 8.41 4.78 40.47 3.53
6401 9558 2.361104 GCTGCCGAATTGGGTCCA 60.361 61.111 8.41 0.00 38.63 4.02
6402 9559 3.508840 CGCTGCCGAATTGGGTCC 61.509 66.667 8.41 0.00 38.63 4.46
6798 9963 1.002087 CCCACTCTGGAGTTAGCGTTT 59.998 52.381 0.00 0.00 40.96 3.60
6799 9964 0.608640 CCCACTCTGGAGTTAGCGTT 59.391 55.000 0.00 0.00 40.96 4.84
6800 9965 0.542232 ACCCACTCTGGAGTTAGCGT 60.542 55.000 0.00 0.00 40.96 5.07
6833 9998 2.550606 AGGCGTCGTTATCAAAAGCAAA 59.449 40.909 0.00 0.00 0.00 3.68
6853 10035 1.341531 CCTCCTATTGGACGCCTGTAG 59.658 57.143 0.00 0.00 37.46 2.74
6994 10181 2.030007 ACCAAAAATGGCAGACACATCG 60.030 45.455 0.00 0.00 0.00 3.84
7003 10190 1.693062 ACATGCAGACCAAAAATGGCA 59.307 42.857 0.00 0.00 35.54 4.92
7171 10358 1.153107 TTGGAGGCTGATGATGGCG 60.153 57.895 0.00 0.00 35.01 5.69
7273 10460 4.574674 ACATAGGCTGGACATTTGAGAA 57.425 40.909 0.00 0.00 0.00 2.87
7471 10659 9.612879 TCCTTGATCCTCTTCTTAAGATATGAT 57.387 33.333 5.89 6.52 36.82 2.45
7565 10753 3.352648 AGCATAAAGTTACCGGTTGCAT 58.647 40.909 23.15 8.94 0.00 3.96
7695 10885 3.656559 TGATCTGGCATGATCGTACATG 58.343 45.455 16.66 15.91 46.96 3.21
7825 11015 2.703798 CCTCGTCGCGGGTTCCTAA 61.704 63.158 6.13 0.00 0.00 2.69
7845 11035 1.078072 ATGAACCGCGGTTGCCATA 60.078 52.632 45.58 25.56 38.60 2.74
7860 11050 1.306997 GGGGGAGTGGAGTGGATGA 60.307 63.158 0.00 0.00 0.00 2.92
7974 11164 9.161684 CCAACGAACAACAGTAATTTAGTTTAC 57.838 33.333 0.00 0.00 33.20 2.01
7990 11180 5.923684 GCATCCTAAAATTTCCAACGAACAA 59.076 36.000 0.00 0.00 0.00 2.83
7997 11187 9.393512 CAATTATTGGCATCCTAAAATTTCCAA 57.606 29.630 7.48 7.48 36.67 3.53
7999 11189 8.962884 ACAATTATTGGCATCCTAAAATTTCC 57.037 30.769 9.88 0.00 34.12 3.13
8007 11197 5.995282 CGTCCTAACAATTATTGGCATCCTA 59.005 40.000 9.88 0.00 34.12 2.94
8008 11198 4.821805 CGTCCTAACAATTATTGGCATCCT 59.178 41.667 9.88 0.00 34.12 3.24
8010 11200 4.023193 CCCGTCCTAACAATTATTGGCATC 60.023 45.833 9.88 0.00 34.12 3.91
8011 11201 3.888930 CCCGTCCTAACAATTATTGGCAT 59.111 43.478 9.88 0.00 34.12 4.40
8016 11222 4.266714 CCACACCCGTCCTAACAATTATT 58.733 43.478 0.00 0.00 0.00 1.40
8029 11235 0.107214 CTATGAATGCCCACACCCGT 60.107 55.000 0.00 0.00 0.00 5.28
8111 11321 6.980416 AACTGAGGTTAGACTCTTACAACT 57.020 37.500 0.00 0.00 38.32 3.16
8151 11361 2.896801 GCCAACTCACACCGTGCAG 61.897 63.158 0.00 0.00 32.98 4.41
8185 11395 3.120649 CCGAGTTGTCTTTCGAATGGAAC 60.121 47.826 10.78 12.70 39.06 3.62
8280 11688 6.407187 GGTGGAGATTAGAAGGTACTCTTTCC 60.407 46.154 0.00 0.00 38.49 3.13
8332 11740 9.932207 TGATTCTGTGCATTTAATCTCAAAAAT 57.068 25.926 14.87 0.50 31.16 1.82
8336 11744 8.186163 GTGATGATTCTGTGCATTTAATCTCAA 58.814 33.333 14.87 1.44 31.16 3.02
8367 11775 4.439776 GTGGTTTTTCGCTAATTGTGACAC 59.560 41.667 0.00 0.00 34.56 3.67
8390 11798 3.848272 ATGCCATGTTTCGTAAAGTGG 57.152 42.857 0.00 3.29 33.00 4.00
8404 11835 0.320946 GGTGCAGTGCAAAATGCCAT 60.321 50.000 21.67 0.00 44.23 4.40
8418 11849 0.681564 ACCGTCAAAAAGTGGGTGCA 60.682 50.000 0.00 0.00 0.00 4.57
8424 11855 2.285827 TTTGGCACCGTCAAAAAGTG 57.714 45.000 0.00 0.00 34.07 3.16
8453 11884 3.932710 CGTGCTTAGAAAATAGGTCAGCA 59.067 43.478 0.00 0.00 33.46 4.41
8454 11885 3.933332 ACGTGCTTAGAAAATAGGTCAGC 59.067 43.478 0.00 0.00 0.00 4.26
8455 11886 6.481954 AAACGTGCTTAGAAAATAGGTCAG 57.518 37.500 0.00 0.00 0.00 3.51
8489 11920 4.632458 GTCGGCTCGCGAGGGATC 62.632 72.222 35.10 19.36 0.00 3.36
8498 11929 1.418342 CCGTTACCATTGTCGGCTCG 61.418 60.000 0.00 0.00 36.68 5.03
8509 11940 2.705934 TTTACGCCGCACCGTTACCA 62.706 55.000 3.91 0.00 42.20 3.25
8534 11965 4.230657 CAACTTCCGACAGACTAGTCAAG 58.769 47.826 24.44 18.43 38.43 3.02
8541 11972 0.034059 CCAGCAACTTCCGACAGACT 59.966 55.000 0.00 0.00 0.00 3.24
8542 11973 0.951040 CCCAGCAACTTCCGACAGAC 60.951 60.000 0.00 0.00 0.00 3.51
8579 12010 1.339631 CGAGTGACTGAGGGAGAGAGT 60.340 57.143 0.00 0.00 0.00 3.24
8586 12017 2.681778 AGGGCGAGTGACTGAGGG 60.682 66.667 0.00 0.00 0.00 4.30
8589 12020 2.680352 GGGAGGGCGAGTGACTGA 60.680 66.667 0.00 0.00 0.00 3.41
8614 12045 2.093711 CGAGAGAGGTGAGAGAGAGTGA 60.094 54.545 0.00 0.00 0.00 3.41
8618 12049 1.065782 CCACGAGAGAGGTGAGAGAGA 60.066 57.143 0.00 0.00 37.60 3.10
8654 12085 2.456119 CGTGACCTTCGGCAGATGC 61.456 63.158 0.00 0.00 41.14 3.91
8668 12099 0.179148 CGTCAATGGATCCGACGTGA 60.179 55.000 24.33 14.68 45.59 4.35
8670 12101 4.806571 CGTCAATGGATCCGACGT 57.193 55.556 24.33 0.00 45.59 4.34
8757 12197 0.462759 CAACAATCCTCCTCCTCGCC 60.463 60.000 0.00 0.00 0.00 5.54
8768 12208 1.429423 GCTACTGCCGCAACAATCC 59.571 57.895 0.00 0.00 0.00 3.01
8787 12227 3.370978 AGTGGCGACAATGAACGAAATAG 59.629 43.478 0.00 0.00 46.06 1.73
8834 12274 1.151699 TGATTCCTCCACCACCCCA 60.152 57.895 0.00 0.00 0.00 4.96
8872 12312 1.550524 AGGAGAATGTAGCTCACGCAA 59.449 47.619 0.00 0.00 39.10 4.85
8889 12329 0.616111 GAGGGGACAGCTCAAGAGGA 60.616 60.000 0.00 0.00 0.00 3.71
8895 12335 5.805208 ATATATAGAGAGGGGACAGCTCA 57.195 43.478 0.00 0.00 36.74 4.26
8900 12340 9.170890 ACAAAATGAATATATAGAGAGGGGACA 57.829 33.333 0.00 0.00 0.00 4.02
8924 12364 2.298729 GGGACCTTAAATTGCAGCAACA 59.701 45.455 10.85 0.00 0.00 3.33
8943 12383 3.669939 ACCCTACATTCCAAATCTGGG 57.330 47.619 0.00 0.00 43.71 4.45
8945 12385 4.513442 TCGAACCCTACATTCCAAATCTG 58.487 43.478 0.00 0.00 0.00 2.90
8949 12389 4.721132 ACTTTCGAACCCTACATTCCAAA 58.279 39.130 0.00 0.00 0.00 3.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.