Multiple sequence alignment - TraesCS5D01G111600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G111600 chr5D 100.000 5619 0 0 1 5619 126581613 126575995 0.000000e+00 10377.0
1 TraesCS5D01G111600 chr5D 100.000 1825 0 0 5851 7675 126575763 126573939 0.000000e+00 3371.0
2 TraesCS5D01G111600 chr5D 96.332 518 16 2 1 518 332105697 332105183 0.000000e+00 848.0
3 TraesCS5D01G111600 chr5D 96.154 520 17 1 1 520 281805674 281806190 0.000000e+00 846.0
4 TraesCS5D01G111600 chr5D 77.170 530 64 38 4452 4938 234211857 234212372 9.880000e-64 255.0
5 TraesCS5D01G111600 chr5D 84.141 227 34 2 519 743 39038779 39039005 1.300000e-52 219.0
6 TraesCS5D01G111600 chr5D 92.562 121 9 0 4013 4133 2138573 2138693 2.850000e-39 174.0
7 TraesCS5D01G111600 chr5D 79.058 191 35 3 4756 4945 495223257 495223071 8.090000e-25 126.0
8 TraesCS5D01G111600 chr5D 80.588 170 24 8 4756 4922 320447486 320447323 1.050000e-23 122.0
9 TraesCS5D01G111600 chr5A 96.987 2655 49 11 1385 4018 141888565 141885921 0.000000e+00 4431.0
10 TraesCS5D01G111600 chr5A 95.501 1845 57 11 5853 7675 141884420 141882580 0.000000e+00 2924.0
11 TraesCS5D01G111600 chr5A 95.101 1490 58 4 4132 5619 141885923 141884447 0.000000e+00 2333.0
12 TraesCS5D01G111600 chr5A 98.929 280 3 0 865 1144 141889490 141889211 1.150000e-137 501.0
13 TraesCS5D01G111600 chr5A 97.990 199 4 0 1189 1387 141888808 141888610 5.700000e-91 346.0
14 TraesCS5D01G111600 chr5B 94.295 2647 105 15 1386 4018 139356903 139354289 0.000000e+00 4010.0
15 TraesCS5D01G111600 chr5B 87.459 1531 122 34 6003 7499 139353844 139352350 0.000000e+00 1700.0
16 TraesCS5D01G111600 chr5B 97.343 527 13 1 854 1379 139357477 139356951 0.000000e+00 894.0
17 TraesCS5D01G111600 chr5B 88.073 327 22 3 4132 4443 139354291 139353967 9.410000e-99 372.0
18 TraesCS5D01G111600 chr5B 89.372 207 12 5 7479 7675 139351768 139351562 1.280000e-62 252.0
19 TraesCS5D01G111600 chr5B 80.745 161 26 4 4760 4919 482978948 482978792 3.760000e-23 121.0
20 TraesCS5D01G111600 chr4D 96.525 518 14 2 1 518 390710290 390709777 0.000000e+00 854.0
21 TraesCS5D01G111600 chr4D 96.332 518 16 1 1 518 65690027 65689513 0.000000e+00 848.0
22 TraesCS5D01G111600 chr4D 96.332 518 16 1 1 518 458885262 458885776 0.000000e+00 848.0
23 TraesCS5D01G111600 chr4D 79.321 324 47 15 4448 4761 448800541 448800228 7.800000e-50 209.0
24 TraesCS5D01G111600 chr4D 91.870 123 10 0 4012 4134 494875908 494876030 1.020000e-38 172.0
25 TraesCS5D01G111600 chr4D 91.525 118 10 0 4016 4133 312567273 312567390 6.160000e-36 163.0
26 TraesCS5D01G111600 chr4D 90.164 122 10 2 4013 4133 75782980 75783100 2.870000e-34 158.0
27 TraesCS5D01G111600 chr4D 90.435 115 11 0 4016 4130 51798175 51798061 1.330000e-32 152.0
28 TraesCS5D01G111600 chr4D 88.618 123 12 2 4012 4133 50649527 50649406 1.730000e-31 148.0
29 TraesCS5D01G111600 chr3D 96.525 518 15 1 1 518 363814210 363813696 0.000000e+00 854.0
30 TraesCS5D01G111600 chr3D 96.332 518 16 1 1 518 231370589 231371103 0.000000e+00 848.0
31 TraesCS5D01G111600 chr3D 78.956 594 84 23 4449 5005 273383324 273382735 4.380000e-97 366.0
32 TraesCS5D01G111600 chr3D 92.917 240 16 1 519 758 442748361 442748599 1.590000e-91 348.0
33 TraesCS5D01G111600 chr3D 90.323 124 12 0 4011 4134 22931647 22931770 6.160000e-36 163.0
34 TraesCS5D01G111600 chr3D 81.633 147 24 2 4760 4906 26811316 26811459 1.350000e-22 119.0
35 TraesCS5D01G111600 chr3D 78.857 175 31 3 4771 4945 92226486 92226318 6.290000e-21 113.0
36 TraesCS5D01G111600 chr3D 82.474 97 13 2 4768 4864 68323307 68323399 1.780000e-11 82.4
37 TraesCS5D01G111600 chr3D 89.286 56 4 2 4446 4499 277533785 277533730 1.380000e-07 69.4
38 TraesCS5D01G111600 chr3D 91.111 45 3 1 4455 4498 422521773 422521817 8.320000e-05 60.2
39 TraesCS5D01G111600 chr7D 96.332 518 16 1 1 518 331567407 331566893 0.000000e+00 848.0
40 TraesCS5D01G111600 chr7D 78.509 1140 152 43 4445 5509 89289187 89288066 0.000000e+00 662.0
41 TraesCS5D01G111600 chr7D 93.133 233 15 1 519 750 79975225 79975457 2.650000e-89 340.0
42 TraesCS5D01G111600 chr7D 92.149 242 17 2 519 758 613458488 613458247 2.650000e-89 340.0
43 TraesCS5D01G111600 chr7D 90.496 242 21 2 519 758 135440291 135440532 1.240000e-82 318.0
44 TraesCS5D01G111600 chr7D 75.385 585 92 24 4446 4994 72952948 72952380 1.290000e-57 235.0
45 TraesCS5D01G111600 chr7D 91.129 124 11 0 4013 4136 484315810 484315687 1.320000e-37 169.0
46 TraesCS5D01G111600 chr7D 84.181 177 22 5 4760 4934 224061799 224061627 4.760000e-37 167.0
47 TraesCS5D01G111600 chr7D 89.474 133 11 3 4016 4148 552952932 552952803 1.710000e-36 165.0
48 TraesCS5D01G111600 chr7D 74.233 326 61 21 4446 4754 134448982 134448663 1.750000e-21 115.0
49 TraesCS5D01G111600 chr7D 81.633 147 16 9 4443 4582 82442817 82442959 2.260000e-20 111.0
50 TraesCS5D01G111600 chr7D 83.495 103 6 5 753 855 20620978 20621069 1.370000e-12 86.1
51 TraesCS5D01G111600 chr7D 91.111 45 4 0 4445 4489 461676945 461676989 2.310000e-05 62.1
52 TraesCS5D01G111600 chr7D 87.273 55 4 3 4447 4499 245242280 245242227 8.320000e-05 60.2
53 TraesCS5D01G111600 chr1D 96.332 518 16 1 1 518 99806267 99805753 0.000000e+00 848.0
54 TraesCS5D01G111600 chr1D 91.701 241 19 1 519 758 222898468 222898708 4.440000e-87 333.0
55 TraesCS5D01G111600 chr1D 77.715 534 65 31 4445 4937 298281096 298280576 2.110000e-70 278.0
56 TraesCS5D01G111600 chr1D 91.525 118 10 0 4016 4133 182046801 182046684 6.160000e-36 163.0
57 TraesCS5D01G111600 chr1D 88.525 122 14 0 4012 4133 329739688 329739809 1.730000e-31 148.0
58 TraesCS5D01G111600 chr1D 90.179 112 11 0 4023 4134 476229411 476229522 6.210000e-31 147.0
59 TraesCS5D01G111600 chr1D 86.777 121 16 0 4013 4133 105774949 105775069 1.340000e-27 135.0
60 TraesCS5D01G111600 chr1D 88.288 111 13 0 4023 4133 408937811 408937701 4.830000e-27 134.0
61 TraesCS5D01G111600 chr1D 92.135 89 7 0 4045 4133 452887 452799 8.090000e-25 126.0
62 TraesCS5D01G111600 chr1D 94.366 71 4 0 4045 4115 182046702 182046772 8.140000e-20 110.0
63 TraesCS5D01G111600 chr1D 91.549 71 6 0 4045 4115 116548439 116548369 1.760000e-16 99.0
64 TraesCS5D01G111600 chr1D 85.859 99 4 3 758 856 222898733 222898821 6.340000e-16 97.1
65 TraesCS5D01G111600 chr6A 80.125 639 85 24 4488 5092 346593794 346593164 9.140000e-119 438.0
66 TraesCS5D01G111600 chr6A 91.597 119 10 0 4016 4134 277889801 277889683 1.710000e-36 165.0
67 TraesCS5D01G111600 chr6A 90.984 122 11 0 4016 4137 326741916 326741795 1.710000e-36 165.0
68 TraesCS5D01G111600 chr6A 89.431 123 13 0 4012 4134 16713502 16713624 1.030000e-33 156.0
69 TraesCS5D01G111600 chr6A 84.768 151 21 2 4513 4662 576244660 576244511 4.800000e-32 150.0
70 TraesCS5D01G111600 chr6A 84.106 151 22 2 4513 4662 576412574 576412425 2.230000e-30 145.0
71 TraesCS5D01G111600 chr6A 84.106 151 22 2 4513 4662 576502747 576502598 2.230000e-30 145.0
72 TraesCS5D01G111600 chr6A 87.500 80 4 5 4445 4519 602136243 602136321 3.820000e-13 87.9
73 TraesCS5D01G111600 chr6A 74.332 187 42 5 4545 4726 549642937 549642752 2.970000e-09 75.0
74 TraesCS5D01G111600 chr6D 76.579 871 134 37 4448 5271 22141306 22142153 1.540000e-111 414.0
75 TraesCS5D01G111600 chr6D 81.679 524 58 24 4488 4979 249957836 249958353 1.200000e-107 401.0
76 TraesCS5D01G111600 chr6D 92.946 241 16 1 519 758 6830852 6830612 4.410000e-92 350.0
77 TraesCS5D01G111600 chr6D 89.041 73 4 3 4045 4115 144146457 144146527 3.820000e-13 87.9
78 TraesCS5D01G111600 chr6D 84.211 95 7 2 758 852 6830463 6830377 1.370000e-12 86.1
79 TraesCS5D01G111600 chr6D 87.500 72 7 2 4045 4115 128316121 128316191 1.780000e-11 82.4
80 TraesCS5D01G111600 chr6D 87.324 71 6 2 4045 4115 458510254 458510187 2.300000e-10 78.7
81 TraesCS5D01G111600 chr2D 90.456 241 22 1 519 758 110022236 110021996 4.470000e-82 316.0
82 TraesCS5D01G111600 chr2D 90.717 237 21 1 519 755 406142953 406143188 1.610000e-81 315.0
83 TraesCS5D01G111600 chr2D 91.667 120 10 0 4014 4133 599946232 599946113 4.760000e-37 167.0
84 TraesCS5D01G111600 chr2D 82.313 147 21 5 4445 4587 477426367 477426222 1.050000e-23 122.0
85 TraesCS5D01G111600 chr2D 76.991 226 42 9 4446 4666 194350170 194350390 3.760000e-23 121.0
86 TraesCS5D01G111600 chr1A 84.177 316 40 7 519 830 19752585 19752276 1.620000e-76 298.0
87 TraesCS5D01G111600 chr1A 90.400 125 12 0 4009 4133 53442791 53442915 1.710000e-36 165.0
88 TraesCS5D01G111600 chr1A 90.678 118 11 0 4016 4133 65267151 65267034 2.870000e-34 158.0
89 TraesCS5D01G111600 chr1A 78.571 196 33 6 4772 4963 492055518 492055328 3.760000e-23 121.0
90 TraesCS5D01G111600 chr1B 86.752 234 26 4 519 749 6249999 6250230 9.880000e-64 255.0
91 TraesCS5D01G111600 chr1B 77.570 321 61 10 4445 4760 508552112 508551798 4.730000e-42 183.0
92 TraesCS5D01G111600 chr1B 91.803 122 10 0 4012 4133 1821178 1821057 3.680000e-38 171.0
93 TraesCS5D01G111600 chr1B 78.723 188 33 5 4760 4945 327359530 327359712 1.350000e-22 119.0
94 TraesCS5D01G111600 chr2B 79.310 319 56 8 4449 4760 789521124 789520809 1.680000e-51 215.0
95 TraesCS5D01G111600 chr2B 78.683 319 57 10 4448 4760 763653342 763653029 1.310000e-47 202.0
96 TraesCS5D01G111600 chr7B 78.899 327 47 18 4446 4761 748845377 748845062 1.310000e-47 202.0
97 TraesCS5D01G111600 chr7B 92.437 119 9 0 4016 4134 143329514 143329396 3.680000e-38 171.0
98 TraesCS5D01G111600 chr7B 91.057 123 11 0 4012 4134 200791574 200791696 4.760000e-37 167.0
99 TraesCS5D01G111600 chr4B 79.715 281 46 8 4448 4723 11432521 11432247 7.860000e-45 193.0
100 TraesCS5D01G111600 chr4B 73.519 540 96 31 4443 4944 665956119 665955589 2.220000e-35 161.0
101 TraesCS5D01G111600 chr4B 95.455 44 1 1 4447 4489 505090058 505090101 1.380000e-07 69.4
102 TraesCS5D01G111600 chr3B 79.252 294 45 13 4446 4731 680829000 680828715 2.830000e-44 191.0
103 TraesCS5D01G111600 chr3B 91.791 134 10 1 4005 4138 52425258 52425390 1.320000e-42 185.0
104 TraesCS5D01G111600 chr3B 79.747 237 43 2 4760 4994 360118446 360118679 4.760000e-37 167.0
105 TraesCS5D01G111600 chr4A 92.373 118 9 0 4016 4133 615041432 615041315 1.320000e-37 169.0
106 TraesCS5D01G111600 chr3A 90.551 127 11 1 4012 4138 114241415 114241540 4.760000e-37 167.0
107 TraesCS5D01G111600 chrUn 91.525 118 10 0 4016 4133 112678693 112678810 6.160000e-36 163.0
108 TraesCS5D01G111600 chrUn 86.029 136 16 2 618 750 15382305 15382170 8.030000e-30 143.0
109 TraesCS5D01G111600 chrUn 90.141 71 7 0 4045 4115 29732753 29732683 8.200000e-15 93.5
110 TraesCS5D01G111600 chrUn 89.041 73 4 3 4045 4115 76767121 76767051 3.820000e-13 87.9
111 TraesCS5D01G111600 chrUn 83.838 99 6 3 758 856 100332291 100332203 1.370000e-12 86.1
112 TraesCS5D01G111600 chrUn 87.671 73 5 3 4045 4115 27088437 27088367 1.780000e-11 82.4
113 TraesCS5D01G111600 chrUn 85.915 71 10 0 4045 4115 37869571 37869641 8.260000e-10 76.8
114 TraesCS5D01G111600 chrUn 85.915 71 10 0 4045 4115 333562559 333562629 8.260000e-10 76.8
115 TraesCS5D01G111600 chrUn 100.000 30 0 0 4105 4134 130470532 130470561 1.000000e-03 56.5
116 TraesCS5D01G111600 chrUn 100.000 28 0 0 4088 4115 8487431 8487404 1.400000e-02 52.8
117 TraesCS5D01G111600 chr2A 82.178 101 12 6 758 857 677493804 677493709 1.780000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G111600 chr5D 126573939 126581613 7674 True 6874.0 10377 100.0000 1 7675 2 chr5D.!!$R4 7674
1 TraesCS5D01G111600 chr5D 332105183 332105697 514 True 848.0 848 96.3320 1 518 1 chr5D.!!$R2 517
2 TraesCS5D01G111600 chr5D 281805674 281806190 516 False 846.0 846 96.1540 1 520 1 chr5D.!!$F4 519
3 TraesCS5D01G111600 chr5D 234211857 234212372 515 False 255.0 255 77.1700 4452 4938 1 chr5D.!!$F3 486
4 TraesCS5D01G111600 chr5A 141882580 141889490 6910 True 2107.0 4431 96.9016 865 7675 5 chr5A.!!$R1 6810
5 TraesCS5D01G111600 chr5B 139351562 139357477 5915 True 1445.6 4010 91.3084 854 7675 5 chr5B.!!$R2 6821
6 TraesCS5D01G111600 chr4D 390709777 390710290 513 True 854.0 854 96.5250 1 518 1 chr4D.!!$R4 517
7 TraesCS5D01G111600 chr4D 65689513 65690027 514 True 848.0 848 96.3320 1 518 1 chr4D.!!$R3 517
8 TraesCS5D01G111600 chr4D 458885262 458885776 514 False 848.0 848 96.3320 1 518 1 chr4D.!!$F3 517
9 TraesCS5D01G111600 chr3D 363813696 363814210 514 True 854.0 854 96.5250 1 518 1 chr3D.!!$R4 517
10 TraesCS5D01G111600 chr3D 231370589 231371103 514 False 848.0 848 96.3320 1 518 1 chr3D.!!$F4 517
11 TraesCS5D01G111600 chr3D 273382735 273383324 589 True 366.0 366 78.9560 4449 5005 1 chr3D.!!$R2 556
12 TraesCS5D01G111600 chr7D 331566893 331567407 514 True 848.0 848 96.3320 1 518 1 chr7D.!!$R6 517
13 TraesCS5D01G111600 chr7D 89288066 89289187 1121 True 662.0 662 78.5090 4445 5509 1 chr7D.!!$R2 1064
14 TraesCS5D01G111600 chr7D 72952380 72952948 568 True 235.0 235 75.3850 4446 4994 1 chr7D.!!$R1 548
15 TraesCS5D01G111600 chr1D 99805753 99806267 514 True 848.0 848 96.3320 1 518 1 chr1D.!!$R2 517
16 TraesCS5D01G111600 chr1D 298280576 298281096 520 True 278.0 278 77.7150 4445 4937 1 chr1D.!!$R5 492
17 TraesCS5D01G111600 chr6A 346593164 346593794 630 True 438.0 438 80.1250 4488 5092 1 chr6A.!!$R3 604
18 TraesCS5D01G111600 chr6D 22141306 22142153 847 False 414.0 414 76.5790 4448 5271 1 chr6D.!!$F1 823
19 TraesCS5D01G111600 chr6D 249957836 249958353 517 False 401.0 401 81.6790 4488 4979 1 chr6D.!!$F4 491

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
604 605 0.036765 CCCCGGTCTGATTCGTTCAA 60.037 55.0 0.00 0.00 32.78 2.69 F
675 676 0.107897 TATCAACAATGGAGCCGCGT 60.108 50.0 4.92 0.00 0.00 6.01 F
2257 2709 0.167470 CTGTTGGTGCTGCTCAATCG 59.833 55.0 0.00 0.00 0.00 3.34 F
4047 4529 0.039165 CGGAAAAGCTTGTCCCAAGC 60.039 55.0 26.94 18.69 43.31 4.01 F
4625 5128 0.395311 GCTAAACCCACTAAGCCCCC 60.395 60.0 0.00 0.00 0.00 5.40 F
5351 5950 0.034896 CCACCGTAGCCTCAACAACT 59.965 55.0 0.00 0.00 0.00 3.16 F
5545 6146 0.321653 GTGAACTTCCAGGCCGTGAT 60.322 55.0 0.00 0.00 0.00 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1807 2258 1.434188 TCTCTTTGGCTGAACTCCCA 58.566 50.000 0.0 0.0 0.00 4.37 R
2600 3052 1.754226 TCACGGTCATATAGTGCAGCA 59.246 47.619 0.0 0.0 35.97 4.41 R
4117 4599 0.042131 ATGGTACTCCCTCCGTCCAA 59.958 55.000 0.0 0.0 0.00 3.53 R
5046 5600 1.261480 GAGTTCTCTCTGCCTCACCA 58.739 55.000 0.0 0.0 37.68 4.17 R
5938 6539 1.339151 ACAATTCTGAGGTTCTCGCCC 60.339 52.381 0.0 0.0 32.35 6.13 R
6238 6936 2.032528 CCACCCACACACGCTGAT 59.967 61.111 0.0 0.0 0.00 2.90 R
6959 7673 2.793585 GCACATTTGAGCGGTGATCATG 60.794 50.000 0.0 0.0 34.52 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 4.439057 GGATGTCGGCAGTATAGTTCAAA 58.561 43.478 0.00 0.00 0.00 2.69
173 174 0.673644 AAAACTCACCCTGGATCGCG 60.674 55.000 0.00 0.00 0.00 5.87
175 176 2.202797 CTCACCCTGGATCGCGTG 60.203 66.667 5.77 0.00 0.00 5.34
180 181 2.047274 CCTGGATCGCGTGGTTGT 60.047 61.111 5.77 0.00 0.00 3.32
481 482 8.043710 AGCTAGCCTATGGTATGATTATTGTTC 58.956 37.037 12.13 0.00 0.00 3.18
482 483 7.281100 GCTAGCCTATGGTATGATTATTGTTCC 59.719 40.741 2.29 0.00 0.00 3.62
483 484 7.335127 AGCCTATGGTATGATTATTGTTCCT 57.665 36.000 0.00 0.00 0.00 3.36
520 521 5.435545 ACCCTCTGGTTTATATAGACCCT 57.564 43.478 17.51 0.00 44.75 4.34
521 522 5.404395 ACCCTCTGGTTTATATAGACCCTC 58.596 45.833 17.51 0.00 44.75 4.30
522 523 5.102783 ACCCTCTGGTTTATATAGACCCTCA 60.103 44.000 17.51 1.33 44.75 3.86
523 524 6.026186 CCCTCTGGTTTATATAGACCCTCAT 58.974 44.000 17.51 0.00 34.99 2.90
524 525 6.155393 CCCTCTGGTTTATATAGACCCTCATC 59.845 46.154 17.51 0.00 34.99 2.92
525 526 6.155393 CCTCTGGTTTATATAGACCCTCATCC 59.845 46.154 17.51 0.00 34.99 3.51
526 527 5.715279 TCTGGTTTATATAGACCCTCATCCG 59.285 44.000 17.51 1.29 34.99 4.18
527 528 5.647230 TGGTTTATATAGACCCTCATCCGA 58.353 41.667 17.51 0.00 34.99 4.55
528 529 5.479375 TGGTTTATATAGACCCTCATCCGAC 59.521 44.000 17.51 0.00 34.99 4.79
529 530 5.392811 GGTTTATATAGACCCTCATCCGACG 60.393 48.000 10.73 0.00 0.00 5.12
530 531 2.945080 TATAGACCCTCATCCGACGT 57.055 50.000 0.00 0.00 0.00 4.34
531 532 1.606903 ATAGACCCTCATCCGACGTC 58.393 55.000 5.18 5.18 0.00 4.34
532 533 0.545171 TAGACCCTCATCCGACGTCT 59.455 55.000 14.70 0.00 37.54 4.18
533 534 0.323542 AGACCCTCATCCGACGTCTT 60.324 55.000 14.70 0.00 29.59 3.01
534 535 1.064906 AGACCCTCATCCGACGTCTTA 60.065 52.381 14.70 1.17 29.59 2.10
535 536 1.334243 GACCCTCATCCGACGTCTTAG 59.666 57.143 14.70 2.27 0.00 2.18
536 537 1.340795 ACCCTCATCCGACGTCTTAGT 60.341 52.381 14.70 0.00 0.00 2.24
537 538 1.334243 CCCTCATCCGACGTCTTAGTC 59.666 57.143 14.70 0.00 37.76 2.59
538 539 2.014857 CCTCATCCGACGTCTTAGTCA 58.985 52.381 14.70 0.00 40.98 3.41
539 540 2.619177 CCTCATCCGACGTCTTAGTCAT 59.381 50.000 14.70 0.00 40.98 3.06
540 541 3.549019 CCTCATCCGACGTCTTAGTCATG 60.549 52.174 14.70 6.47 40.98 3.07
541 542 3.014623 TCATCCGACGTCTTAGTCATGT 58.985 45.455 14.70 0.00 40.98 3.21
542 543 2.913777 TCCGACGTCTTAGTCATGTG 57.086 50.000 14.70 0.00 40.98 3.21
543 544 1.471287 TCCGACGTCTTAGTCATGTGG 59.529 52.381 14.70 3.20 40.98 4.17
544 545 1.469251 CCGACGTCTTAGTCATGTGGG 60.469 57.143 14.70 0.00 40.98 4.61
545 546 1.469251 CGACGTCTTAGTCATGTGGGG 60.469 57.143 14.70 0.00 40.98 4.96
546 547 0.902531 ACGTCTTAGTCATGTGGGGG 59.097 55.000 0.00 0.00 0.00 5.40
547 548 0.902531 CGTCTTAGTCATGTGGGGGT 59.097 55.000 0.00 0.00 0.00 4.95
548 549 1.405526 CGTCTTAGTCATGTGGGGGTG 60.406 57.143 0.00 0.00 0.00 4.61
549 550 0.618458 TCTTAGTCATGTGGGGGTGC 59.382 55.000 0.00 0.00 0.00 5.01
550 551 0.394352 CTTAGTCATGTGGGGGTGCC 60.394 60.000 0.00 0.00 0.00 5.01
551 552 1.136961 TTAGTCATGTGGGGGTGCCA 61.137 55.000 0.00 0.00 0.00 4.92
552 553 1.561769 TAGTCATGTGGGGGTGCCAG 61.562 60.000 0.00 0.00 0.00 4.85
553 554 2.531428 TCATGTGGGGGTGCCAGA 60.531 61.111 0.00 0.00 0.00 3.86
554 555 1.930133 TCATGTGGGGGTGCCAGAT 60.930 57.895 0.00 0.00 0.00 2.90
555 556 1.454479 CATGTGGGGGTGCCAGATC 60.454 63.158 0.00 0.00 0.00 2.75
556 557 1.620589 ATGTGGGGGTGCCAGATCT 60.621 57.895 0.00 0.00 0.00 2.75
557 558 1.929860 ATGTGGGGGTGCCAGATCTG 61.930 60.000 16.24 16.24 0.00 2.90
570 571 2.995283 CAGATCTGGAGTTCAATGGCA 58.005 47.619 15.38 0.00 0.00 4.92
571 572 3.552875 CAGATCTGGAGTTCAATGGCAT 58.447 45.455 15.38 0.00 0.00 4.40
572 573 3.315470 CAGATCTGGAGTTCAATGGCATG 59.685 47.826 15.38 0.00 0.00 4.06
573 574 2.885135 TCTGGAGTTCAATGGCATGT 57.115 45.000 0.00 0.00 0.00 3.21
574 575 2.715046 TCTGGAGTTCAATGGCATGTC 58.285 47.619 0.00 0.00 0.00 3.06
575 576 1.747355 CTGGAGTTCAATGGCATGTCC 59.253 52.381 0.00 3.57 0.00 4.02
576 577 0.734889 GGAGTTCAATGGCATGTCCG 59.265 55.000 0.00 0.00 37.80 4.79
577 578 0.734889 GAGTTCAATGGCATGTCCGG 59.265 55.000 0.00 0.00 37.80 5.14
578 579 0.680921 AGTTCAATGGCATGTCCGGG 60.681 55.000 0.00 0.00 37.80 5.73
579 580 1.379710 TTCAATGGCATGTCCGGGG 60.380 57.895 0.00 0.00 37.80 5.73
580 581 2.044053 CAATGGCATGTCCGGGGT 60.044 61.111 0.00 0.00 37.80 4.95
581 582 2.044053 AATGGCATGTCCGGGGTG 60.044 61.111 0.00 0.00 37.80 4.61
582 583 2.917897 AATGGCATGTCCGGGGTGT 61.918 57.895 0.00 0.00 37.80 4.16
583 584 2.439553 AATGGCATGTCCGGGGTGTT 62.440 55.000 0.00 0.00 37.80 3.32
584 585 3.061848 GGCATGTCCGGGGTGTTG 61.062 66.667 0.00 0.00 0.00 3.33
585 586 3.747976 GCATGTCCGGGGTGTTGC 61.748 66.667 0.00 0.45 0.00 4.17
586 587 3.061848 CATGTCCGGGGTGTTGCC 61.062 66.667 0.00 0.00 0.00 4.52
595 596 3.948719 GGTGTTGCCCCGGTCTGA 61.949 66.667 0.00 0.00 0.00 3.27
596 597 2.351276 GTGTTGCCCCGGTCTGAT 59.649 61.111 0.00 0.00 0.00 2.90
597 598 1.303317 GTGTTGCCCCGGTCTGATT 60.303 57.895 0.00 0.00 0.00 2.57
598 599 1.002624 TGTTGCCCCGGTCTGATTC 60.003 57.895 0.00 0.00 0.00 2.52
599 600 2.106683 GTTGCCCCGGTCTGATTCG 61.107 63.158 0.00 0.00 0.00 3.34
600 601 2.589157 TTGCCCCGGTCTGATTCGT 61.589 57.895 0.00 0.00 0.00 3.85
601 602 2.119484 TTGCCCCGGTCTGATTCGTT 62.119 55.000 0.00 0.00 0.00 3.85
602 603 1.814169 GCCCCGGTCTGATTCGTTC 60.814 63.158 0.00 0.00 0.00 3.95
603 604 1.594833 CCCCGGTCTGATTCGTTCA 59.405 57.895 0.00 0.00 0.00 3.18
604 605 0.036765 CCCCGGTCTGATTCGTTCAA 60.037 55.000 0.00 0.00 32.78 2.69
605 606 1.406887 CCCCGGTCTGATTCGTTCAAT 60.407 52.381 0.00 0.00 32.78 2.57
606 607 1.665679 CCCGGTCTGATTCGTTCAATG 59.334 52.381 0.00 0.00 32.78 2.82
607 608 1.665679 CCGGTCTGATTCGTTCAATGG 59.334 52.381 0.00 0.00 32.78 3.16
608 609 1.062587 CGGTCTGATTCGTTCAATGGC 59.937 52.381 0.00 0.00 32.78 4.40
609 610 2.083774 GGTCTGATTCGTTCAATGGCA 58.916 47.619 0.00 0.00 32.78 4.92
610 611 2.487762 GGTCTGATTCGTTCAATGGCAA 59.512 45.455 0.00 0.00 32.78 4.52
611 612 3.129287 GGTCTGATTCGTTCAATGGCAAT 59.871 43.478 0.00 0.00 32.78 3.56
612 613 4.100529 GTCTGATTCGTTCAATGGCAATG 58.899 43.478 0.00 0.00 32.78 2.82
613 614 4.009002 TCTGATTCGTTCAATGGCAATGA 58.991 39.130 0.00 0.00 32.78 2.57
614 615 4.641541 TCTGATTCGTTCAATGGCAATGAT 59.358 37.500 6.01 0.00 32.78 2.45
615 616 5.125900 TCTGATTCGTTCAATGGCAATGATT 59.874 36.000 6.01 0.00 32.78 2.57
616 617 5.722263 TGATTCGTTCAATGGCAATGATTT 58.278 33.333 6.01 0.00 0.00 2.17
617 618 5.806502 TGATTCGTTCAATGGCAATGATTTC 59.193 36.000 6.01 0.15 0.00 2.17
618 619 3.757184 TCGTTCAATGGCAATGATTTCG 58.243 40.909 6.01 11.45 0.00 3.46
619 620 2.279659 CGTTCAATGGCAATGATTTCGC 59.720 45.455 6.01 0.00 0.00 4.70
620 621 2.582728 TCAATGGCAATGATTTCGCC 57.417 45.000 0.00 0.00 46.43 5.54
621 622 2.101783 TCAATGGCAATGATTTCGCCT 58.898 42.857 0.00 0.00 46.39 5.52
622 623 2.496871 TCAATGGCAATGATTTCGCCTT 59.503 40.909 0.00 0.00 46.39 4.35
623 624 3.055963 TCAATGGCAATGATTTCGCCTTT 60.056 39.130 0.00 5.28 46.39 3.11
624 625 2.367030 TGGCAATGATTTCGCCTTTG 57.633 45.000 7.86 0.00 46.39 2.77
625 626 1.067000 TGGCAATGATTTCGCCTTTGG 60.067 47.619 7.86 0.00 46.39 3.28
626 627 1.001624 GCAATGATTTCGCCTTTGGC 58.998 50.000 0.00 0.00 46.75 4.52
640 641 4.020617 TGGCGAGCCACCTTGGAG 62.021 66.667 13.49 0.00 40.96 3.86
641 642 4.785453 GGCGAGCCACCTTGGAGG 62.785 72.222 9.58 0.00 40.96 4.30
650 651 3.987404 CCTTGGAGGTCCGCAAAG 58.013 61.111 2.76 2.76 39.43 2.77
651 652 2.335712 CCTTGGAGGTCCGCAAAGC 61.336 63.158 4.22 0.00 39.43 3.51
652 653 1.302832 CTTGGAGGTCCGCAAAGCT 60.303 57.895 0.00 0.00 39.43 3.74
653 654 1.580845 CTTGGAGGTCCGCAAAGCTG 61.581 60.000 0.00 0.00 39.43 4.24
654 655 3.435186 GGAGGTCCGCAAAGCTGC 61.435 66.667 0.00 0.00 45.75 5.25
668 669 5.001237 CAAAGCTGCATATCAACAATGGA 57.999 39.130 1.02 0.00 0.00 3.41
669 670 4.913335 AAGCTGCATATCAACAATGGAG 57.087 40.909 1.02 0.78 43.43 3.86
671 672 3.637998 CTGCATATCAACAATGGAGCC 57.362 47.619 0.00 0.00 36.25 4.70
672 673 1.948834 TGCATATCAACAATGGAGCCG 59.051 47.619 0.00 0.00 0.00 5.52
673 674 1.335324 GCATATCAACAATGGAGCCGC 60.335 52.381 0.00 0.00 0.00 6.53
674 675 1.069703 CATATCAACAATGGAGCCGCG 60.070 52.381 0.00 0.00 0.00 6.46
675 676 0.107897 TATCAACAATGGAGCCGCGT 60.108 50.000 4.92 0.00 0.00 6.01
676 677 0.960364 ATCAACAATGGAGCCGCGTT 60.960 50.000 4.92 0.00 0.00 4.84
677 678 1.442520 CAACAATGGAGCCGCGTTG 60.443 57.895 4.92 4.15 0.00 4.10
678 679 1.599518 AACAATGGAGCCGCGTTGA 60.600 52.632 4.92 0.00 0.00 3.18
679 680 1.577328 AACAATGGAGCCGCGTTGAG 61.577 55.000 4.92 0.00 0.00 3.02
680 681 3.127533 AATGGAGCCGCGTTGAGC 61.128 61.111 4.92 0.00 43.95 4.26
681 682 3.612247 AATGGAGCCGCGTTGAGCT 62.612 57.895 7.32 7.32 45.59 4.09
688 689 4.717629 CGCGTTGAGCTCGGGTGA 62.718 66.667 9.64 0.00 45.59 4.02
689 690 2.811317 GCGTTGAGCTCGGGTGAG 60.811 66.667 9.64 0.00 45.49 3.51
690 691 2.962569 CGTTGAGCTCGGGTGAGA 59.037 61.111 9.64 0.00 45.57 3.27
691 692 1.289066 CGTTGAGCTCGGGTGAGAA 59.711 57.895 9.64 0.00 45.57 2.87
692 693 0.734253 CGTTGAGCTCGGGTGAGAAG 60.734 60.000 9.64 0.00 45.57 2.85
693 694 0.390472 GTTGAGCTCGGGTGAGAAGG 60.390 60.000 9.64 0.00 45.57 3.46
694 695 0.832135 TTGAGCTCGGGTGAGAAGGT 60.832 55.000 9.64 0.00 45.57 3.50
695 696 1.216710 GAGCTCGGGTGAGAAGGTG 59.783 63.158 0.00 0.00 45.57 4.00
696 697 1.228894 AGCTCGGGTGAGAAGGTGA 60.229 57.895 0.00 0.00 45.57 4.02
697 698 0.616111 AGCTCGGGTGAGAAGGTGAT 60.616 55.000 0.00 0.00 45.57 3.06
698 699 0.179097 GCTCGGGTGAGAAGGTGATC 60.179 60.000 0.00 0.00 45.57 2.92
699 700 0.461961 CTCGGGTGAGAAGGTGATCC 59.538 60.000 0.00 0.00 45.57 3.36
700 701 1.141881 CGGGTGAGAAGGTGATCCG 59.858 63.158 0.00 0.00 39.05 4.18
701 702 1.605058 CGGGTGAGAAGGTGATCCGT 61.605 60.000 0.00 0.00 39.05 4.69
702 703 0.175989 GGGTGAGAAGGTGATCCGTC 59.824 60.000 0.00 0.00 41.41 4.79
703 704 0.895530 GGTGAGAAGGTGATCCGTCA 59.104 55.000 3.45 0.00 43.07 4.35
704 705 1.482593 GGTGAGAAGGTGATCCGTCAT 59.517 52.381 3.45 0.00 43.07 3.06
705 706 2.093447 GGTGAGAAGGTGATCCGTCATT 60.093 50.000 3.45 0.00 43.07 2.57
706 707 3.600388 GTGAGAAGGTGATCCGTCATTT 58.400 45.455 3.45 0.00 43.07 2.32
707 708 4.003648 GTGAGAAGGTGATCCGTCATTTT 58.996 43.478 3.45 0.00 43.07 1.82
708 709 4.455877 GTGAGAAGGTGATCCGTCATTTTT 59.544 41.667 3.45 0.00 43.07 1.94
729 730 6.872628 TTTTCTTCTATGGCTGCTATGATG 57.127 37.500 8.91 6.82 0.00 3.07
730 731 4.548451 TCTTCTATGGCTGCTATGATGG 57.452 45.455 8.91 0.00 0.00 3.51
731 732 3.906218 TCTTCTATGGCTGCTATGATGGT 59.094 43.478 8.91 0.00 0.00 3.55
732 733 3.690475 TCTATGGCTGCTATGATGGTG 57.310 47.619 8.91 0.00 0.00 4.17
733 734 2.082231 CTATGGCTGCTATGATGGTGC 58.918 52.381 8.91 0.00 0.00 5.01
734 735 0.538977 ATGGCTGCTATGATGGTGCC 60.539 55.000 0.00 7.69 40.62 5.01
735 736 2.256591 GGCTGCTATGATGGTGCCG 61.257 63.158 0.00 0.00 0.00 5.69
736 737 2.256591 GCTGCTATGATGGTGCCGG 61.257 63.158 0.00 0.00 0.00 6.13
737 738 1.447217 CTGCTATGATGGTGCCGGA 59.553 57.895 5.05 0.00 0.00 5.14
738 739 0.602106 CTGCTATGATGGTGCCGGAG 60.602 60.000 5.05 0.00 0.00 4.63
751 752 4.436998 CGGAGGCAGGTGACGGAC 62.437 72.222 0.00 0.00 0.00 4.79
752 753 4.436998 GGAGGCAGGTGACGGACG 62.437 72.222 0.00 0.00 39.28 4.79
753 754 3.681835 GAGGCAGGTGACGGACGT 61.682 66.667 0.00 0.00 39.28 4.34
754 755 3.222354 GAGGCAGGTGACGGACGTT 62.222 63.158 0.00 0.00 39.28 3.99
755 756 3.041940 GGCAGGTGACGGACGTTG 61.042 66.667 0.00 0.00 0.00 4.10
756 757 3.041940 GCAGGTGACGGACGTTGG 61.042 66.667 0.00 0.00 0.00 3.77
757 758 2.420043 CAGGTGACGGACGTTGGT 59.580 61.111 0.00 0.00 0.00 3.67
758 759 1.663702 CAGGTGACGGACGTTGGTC 60.664 63.158 11.65 11.65 42.66 4.02
759 760 1.831286 AGGTGACGGACGTTGGTCT 60.831 57.895 17.30 0.00 42.97 3.85
760 761 1.068585 GGTGACGGACGTTGGTCTT 59.931 57.895 17.30 0.00 42.97 3.01
761 762 0.531311 GGTGACGGACGTTGGTCTTT 60.531 55.000 17.30 0.00 42.97 2.52
762 763 1.292992 GTGACGGACGTTGGTCTTTT 58.707 50.000 17.30 0.00 42.97 2.27
763 764 1.259770 GTGACGGACGTTGGTCTTTTC 59.740 52.381 17.30 5.78 42.97 2.29
764 765 1.134759 TGACGGACGTTGGTCTTTTCA 60.135 47.619 17.30 0.00 42.97 2.69
765 766 1.525619 GACGGACGTTGGTCTTTTCAG 59.474 52.381 11.37 0.00 42.97 3.02
766 767 1.134610 ACGGACGTTGGTCTTTTCAGT 60.135 47.619 0.00 0.00 42.97 3.41
767 768 1.937899 CGGACGTTGGTCTTTTCAGTT 59.062 47.619 0.00 0.00 42.97 3.16
768 769 2.353579 CGGACGTTGGTCTTTTCAGTTT 59.646 45.455 0.00 0.00 42.97 2.66
769 770 3.181504 CGGACGTTGGTCTTTTCAGTTTT 60.182 43.478 0.00 0.00 42.97 2.43
770 771 4.102649 GGACGTTGGTCTTTTCAGTTTTG 58.897 43.478 0.00 0.00 42.97 2.44
771 772 4.380128 GGACGTTGGTCTTTTCAGTTTTGT 60.380 41.667 0.00 0.00 42.97 2.83
772 773 4.729595 ACGTTGGTCTTTTCAGTTTTGTC 58.270 39.130 0.00 0.00 0.00 3.18
773 774 4.216687 ACGTTGGTCTTTTCAGTTTTGTCA 59.783 37.500 0.00 0.00 0.00 3.58
774 775 5.105917 ACGTTGGTCTTTTCAGTTTTGTCAT 60.106 36.000 0.00 0.00 0.00 3.06
775 776 5.229887 CGTTGGTCTTTTCAGTTTTGTCATG 59.770 40.000 0.00 0.00 0.00 3.07
776 777 5.913137 TGGTCTTTTCAGTTTTGTCATGT 57.087 34.783 0.00 0.00 0.00 3.21
777 778 5.890334 TGGTCTTTTCAGTTTTGTCATGTC 58.110 37.500 0.00 0.00 0.00 3.06
778 779 4.970003 GGTCTTTTCAGTTTTGTCATGTCG 59.030 41.667 0.00 0.00 0.00 4.35
779 780 4.970003 GTCTTTTCAGTTTTGTCATGTCGG 59.030 41.667 0.00 0.00 0.00 4.79
780 781 4.638421 TCTTTTCAGTTTTGTCATGTCGGT 59.362 37.500 0.00 0.00 0.00 4.69
781 782 4.545823 TTTCAGTTTTGTCATGTCGGTC 57.454 40.909 0.00 0.00 0.00 4.79
782 783 3.469008 TCAGTTTTGTCATGTCGGTCT 57.531 42.857 0.00 0.00 0.00 3.85
783 784 3.804036 TCAGTTTTGTCATGTCGGTCTT 58.196 40.909 0.00 0.00 0.00 3.01
784 785 4.196193 TCAGTTTTGTCATGTCGGTCTTT 58.804 39.130 0.00 0.00 0.00 2.52
785 786 5.361427 TCAGTTTTGTCATGTCGGTCTTTA 58.639 37.500 0.00 0.00 0.00 1.85
786 787 5.995282 TCAGTTTTGTCATGTCGGTCTTTAT 59.005 36.000 0.00 0.00 0.00 1.40
787 788 6.073276 TCAGTTTTGTCATGTCGGTCTTTATG 60.073 38.462 0.00 0.00 0.00 1.90
788 789 5.763204 AGTTTTGTCATGTCGGTCTTTATGT 59.237 36.000 0.00 0.00 0.00 2.29
789 790 6.932400 AGTTTTGTCATGTCGGTCTTTATGTA 59.068 34.615 0.00 0.00 0.00 2.29
790 791 6.961359 TTTGTCATGTCGGTCTTTATGTAG 57.039 37.500 0.00 0.00 0.00 2.74
791 792 4.430007 TGTCATGTCGGTCTTTATGTAGC 58.570 43.478 0.00 0.00 0.00 3.58
792 793 4.159693 TGTCATGTCGGTCTTTATGTAGCT 59.840 41.667 0.00 0.00 0.00 3.32
793 794 5.109903 GTCATGTCGGTCTTTATGTAGCTT 58.890 41.667 0.00 0.00 0.00 3.74
794 795 6.127563 TGTCATGTCGGTCTTTATGTAGCTTA 60.128 38.462 0.00 0.00 0.00 3.09
795 796 6.924060 GTCATGTCGGTCTTTATGTAGCTTAT 59.076 38.462 0.00 0.00 0.00 1.73
796 797 8.080417 GTCATGTCGGTCTTTATGTAGCTTATA 58.920 37.037 0.00 0.00 0.00 0.98
797 798 8.803235 TCATGTCGGTCTTTATGTAGCTTATAT 58.197 33.333 0.00 0.00 0.00 0.86
798 799 9.424319 CATGTCGGTCTTTATGTAGCTTATATT 57.576 33.333 0.00 0.00 0.00 1.28
799 800 9.998106 ATGTCGGTCTTTATGTAGCTTATATTT 57.002 29.630 0.00 0.00 0.00 1.40
800 801 9.826574 TGTCGGTCTTTATGTAGCTTATATTTT 57.173 29.630 0.00 0.00 0.00 1.82
837 838 9.740710 ATGATATGAATGATGAATGAGACACAT 57.259 29.630 0.00 0.00 41.45 3.21
843 844 9.276590 TGAATGATGAATGAGACACATATTACC 57.723 33.333 0.00 0.00 38.38 2.85
844 845 9.276590 GAATGATGAATGAGACACATATTACCA 57.723 33.333 0.00 0.00 38.38 3.25
845 846 9.803507 AATGATGAATGAGACACATATTACCAT 57.196 29.630 0.00 0.00 38.38 3.55
846 847 8.611654 TGATGAATGAGACACATATTACCATG 57.388 34.615 0.00 0.00 38.38 3.66
847 848 8.431222 TGATGAATGAGACACATATTACCATGA 58.569 33.333 0.00 0.00 38.38 3.07
848 849 9.276590 GATGAATGAGACACATATTACCATGAA 57.723 33.333 0.00 0.00 38.38 2.57
849 850 9.631257 ATGAATGAGACACATATTACCATGAAA 57.369 29.630 0.00 0.00 38.38 2.69
850 851 9.460019 TGAATGAGACACATATTACCATGAAAA 57.540 29.630 0.00 0.00 38.38 2.29
1170 1171 1.059913 CTGGTCCAGGAACTCACCTT 58.940 55.000 11.46 0.00 38.83 3.50
1175 1176 1.150135 TCCAGGAACTCACCTTCCTCT 59.850 52.381 0.00 0.00 46.14 3.69
1177 1178 2.289945 CCAGGAACTCACCTTCCTCTTG 60.290 54.545 0.00 0.00 46.14 3.02
1208 1567 3.426568 GCAGTGGTGGAGAAGCGC 61.427 66.667 0.00 0.00 37.04 5.92
1360 1719 1.630878 AGCTTTCTCCGGAGAATTGGT 59.369 47.619 40.01 34.33 45.78 3.67
1376 1735 4.823790 ATTGGTGTGGTCGAGTAAAAAC 57.176 40.909 0.00 0.00 0.00 2.43
1422 1869 4.016444 TGCCTGTTTCTTCTGAACAAAGT 58.984 39.130 0.00 0.00 31.02 2.66
1502 1949 5.482908 ACTAGAACTGGATCAACACATGTC 58.517 41.667 0.00 0.00 0.00 3.06
1599 2050 1.072489 TGGTTCTGGTATCCGCACAAA 59.928 47.619 0.00 0.00 0.00 2.83
1617 2068 4.766891 CACAAACTTATCATCTGTGGGGTT 59.233 41.667 0.00 0.00 34.97 4.11
1654 2105 1.869767 GATCCAATCACTCGCCACATC 59.130 52.381 0.00 0.00 0.00 3.06
1751 2202 2.584835 TTATGTCCTTGTGCTGCCTT 57.415 45.000 0.00 0.00 0.00 4.35
1777 2228 4.943705 GTGGATCCTCAGTCATTTAAAGCA 59.056 41.667 14.23 0.00 0.00 3.91
1807 2258 5.574188 AGCCTATTGAAAAGACCTGATTGT 58.426 37.500 0.00 0.00 0.00 2.71
2257 2709 0.167470 CTGTTGGTGCTGCTCAATCG 59.833 55.000 0.00 0.00 0.00 3.34
2342 2794 3.756434 TGCTATGCCTTTTGGTGAGTAAC 59.244 43.478 0.00 0.00 42.99 2.50
2415 2867 8.985315 TTCATGGATCTGTTTATTGATTAGCT 57.015 30.769 0.00 0.00 0.00 3.32
2600 3052 8.554490 TCTTTTCTAGCCTGGAGACTATAAAT 57.446 34.615 0.00 0.00 0.00 1.40
3226 3678 8.427276 TGAAGATAGTGATTGTGAGCAAGATAT 58.573 33.333 0.00 0.00 38.10 1.63
3350 3802 8.854614 ATAATTATGCTAAGGTTTGCCTCTAG 57.145 34.615 0.00 0.00 46.33 2.43
3351 3803 2.403252 TGCTAAGGTTTGCCTCTAGC 57.597 50.000 14.81 14.81 46.33 3.42
3352 3804 1.065418 TGCTAAGGTTTGCCTCTAGCC 60.065 52.381 17.01 0.00 46.33 3.93
3353 3805 1.747552 GCTAAGGTTTGCCTCTAGCCC 60.748 57.143 12.52 0.00 46.33 5.19
3354 3806 1.840635 CTAAGGTTTGCCTCTAGCCCT 59.159 52.381 0.00 0.00 46.33 5.19
3355 3807 0.621082 AAGGTTTGCCTCTAGCCCTC 59.379 55.000 0.00 0.00 46.33 4.30
3356 3808 0.252927 AGGTTTGCCTCTAGCCCTCT 60.253 55.000 0.00 0.00 42.67 3.69
3369 3821 3.538634 AGCCCTCTACCGAAACATAAC 57.461 47.619 0.00 0.00 0.00 1.89
3389 3841 5.959652 AACGTTGTTGGAATTTGTTAAGC 57.040 34.783 0.00 0.00 0.00 3.09
3579 4048 8.468720 TTTTGCATGACATTCTGTTATTCATG 57.531 30.769 0.00 5.67 34.16 3.07
3580 4049 6.762702 TGCATGACATTCTGTTATTCATGT 57.237 33.333 10.63 0.00 33.80 3.21
3755 4237 6.149474 GGATTATGAAATATTCCCAGGTGTCG 59.851 42.308 0.00 0.00 41.35 4.35
3848 4330 3.054875 TCTTGATCACCATCTTCACCCAG 60.055 47.826 0.00 0.00 0.00 4.45
3864 4346 2.300437 ACCCAGTCAGTCAAGTAGCTTC 59.700 50.000 0.00 0.00 0.00 3.86
3904 4386 1.455217 GCCCTCATGCCAGCTCAAT 60.455 57.895 0.00 0.00 0.00 2.57
4021 4503 8.411683 ACATATTACAGTTTCCTTACTACTCCG 58.588 37.037 0.00 0.00 0.00 4.63
4022 4504 6.847421 ATTACAGTTTCCTTACTACTCCGT 57.153 37.500 0.00 0.00 0.00 4.69
4023 4505 4.780275 ACAGTTTCCTTACTACTCCGTC 57.220 45.455 0.00 0.00 0.00 4.79
4024 4506 3.509184 ACAGTTTCCTTACTACTCCGTCC 59.491 47.826 0.00 0.00 0.00 4.79
4025 4507 2.751806 AGTTTCCTTACTACTCCGTCCG 59.248 50.000 0.00 0.00 0.00 4.79
4026 4508 2.489722 GTTTCCTTACTACTCCGTCCGT 59.510 50.000 0.00 0.00 0.00 4.69
4027 4509 2.029838 TCCTTACTACTCCGTCCGTC 57.970 55.000 0.00 0.00 0.00 4.79
4028 4510 1.020437 CCTTACTACTCCGTCCGTCC 58.980 60.000 0.00 0.00 0.00 4.79
4029 4511 0.654683 CTTACTACTCCGTCCGTCCG 59.345 60.000 0.00 0.00 0.00 4.79
4039 4521 4.371975 TCCGTCCGGAAAAGCTTG 57.628 55.556 5.23 0.00 42.05 4.01
4040 4522 1.448497 TCCGTCCGGAAAAGCTTGT 59.552 52.632 5.23 0.00 42.05 3.16
4041 4523 0.601841 TCCGTCCGGAAAAGCTTGTC 60.602 55.000 5.23 8.23 42.05 3.18
4042 4524 1.574702 CCGTCCGGAAAAGCTTGTCC 61.575 60.000 24.00 24.00 37.50 4.02
4043 4525 1.574702 CGTCCGGAAAAGCTTGTCCC 61.575 60.000 26.94 13.97 0.00 4.46
4044 4526 0.536460 GTCCGGAAAAGCTTGTCCCA 60.536 55.000 26.94 13.18 0.00 4.37
4045 4527 0.183971 TCCGGAAAAGCTTGTCCCAA 59.816 50.000 26.94 14.20 0.00 4.12
4046 4528 0.598065 CCGGAAAAGCTTGTCCCAAG 59.402 55.000 26.94 14.69 0.00 3.61
4047 4529 0.039165 CGGAAAAGCTTGTCCCAAGC 60.039 55.000 26.94 18.69 43.31 4.01
4053 4535 1.959848 GCTTGTCCCAAGCTTGTCC 59.040 57.895 24.35 12.15 40.01 4.02
4054 4536 0.538287 GCTTGTCCCAAGCTTGTCCT 60.538 55.000 24.35 0.00 40.01 3.85
4055 4537 1.986882 CTTGTCCCAAGCTTGTCCTT 58.013 50.000 24.35 0.00 0.00 3.36
4056 4538 1.882623 CTTGTCCCAAGCTTGTCCTTC 59.117 52.381 24.35 10.65 0.00 3.46
4057 4539 0.843309 TGTCCCAAGCTTGTCCTTCA 59.157 50.000 24.35 12.85 0.00 3.02
4058 4540 1.214175 TGTCCCAAGCTTGTCCTTCAA 59.786 47.619 24.35 1.41 34.61 2.69
4059 4541 2.306847 GTCCCAAGCTTGTCCTTCAAA 58.693 47.619 24.35 0.00 35.48 2.69
4060 4542 2.893489 GTCCCAAGCTTGTCCTTCAAAT 59.107 45.455 24.35 0.00 35.48 2.32
4061 4543 2.892852 TCCCAAGCTTGTCCTTCAAATG 59.107 45.455 24.35 5.47 35.48 2.32
4062 4544 2.028748 CCCAAGCTTGTCCTTCAAATGG 60.029 50.000 24.35 10.71 35.48 3.16
4063 4545 2.892852 CCAAGCTTGTCCTTCAAATGGA 59.107 45.455 24.35 0.00 36.92 3.41
4064 4546 3.512724 CCAAGCTTGTCCTTCAAATGGAT 59.487 43.478 24.35 0.00 36.92 3.41
4065 4547 4.491676 CAAGCTTGTCCTTCAAATGGATG 58.508 43.478 18.65 0.00 35.87 3.51
4066 4548 3.771216 AGCTTGTCCTTCAAATGGATGT 58.229 40.909 0.00 0.00 35.87 3.06
4067 4549 4.922206 AGCTTGTCCTTCAAATGGATGTA 58.078 39.130 0.00 0.00 35.87 2.29
4068 4550 5.513233 AGCTTGTCCTTCAAATGGATGTAT 58.487 37.500 0.00 0.00 35.87 2.29
4069 4551 5.591877 AGCTTGTCCTTCAAATGGATGTATC 59.408 40.000 0.00 0.00 35.87 2.24
4070 4552 5.591877 GCTTGTCCTTCAAATGGATGTATCT 59.408 40.000 0.00 0.00 35.87 1.98
4071 4553 6.767902 GCTTGTCCTTCAAATGGATGTATCTA 59.232 38.462 0.00 0.00 35.87 1.98
4072 4554 7.283127 GCTTGTCCTTCAAATGGATGTATCTAA 59.717 37.037 0.00 0.00 35.87 2.10
4073 4555 9.347240 CTTGTCCTTCAAATGGATGTATCTAAT 57.653 33.333 0.00 0.00 35.87 1.73
4075 4557 9.778741 TGTCCTTCAAATGGATGTATCTAATAC 57.221 33.333 0.00 0.00 35.87 1.89
4086 4568 9.502091 TGGATGTATCTAATACTAATTTGGTGC 57.498 33.333 0.00 0.00 36.70 5.01
4087 4569 9.726438 GGATGTATCTAATACTAATTTGGTGCT 57.274 33.333 0.00 0.00 36.70 4.40
4097 4579 9.726438 AATACTAATTTGGTGCTAGATACATCC 57.274 33.333 0.00 0.00 0.00 3.51
4098 4580 7.136822 ACTAATTTGGTGCTAGATACATCCA 57.863 36.000 0.00 0.00 0.00 3.41
4099 4581 7.749666 ACTAATTTGGTGCTAGATACATCCAT 58.250 34.615 0.00 0.00 0.00 3.41
4100 4582 8.220559 ACTAATTTGGTGCTAGATACATCCATT 58.779 33.333 0.00 0.00 0.00 3.16
4101 4583 7.902920 AATTTGGTGCTAGATACATCCATTT 57.097 32.000 0.00 0.00 0.00 2.32
4102 4584 6.698008 TTTGGTGCTAGATACATCCATTTG 57.302 37.500 0.00 0.00 0.00 2.32
4103 4585 5.628797 TGGTGCTAGATACATCCATTTGA 57.371 39.130 0.00 0.00 0.00 2.69
4104 4586 5.614308 TGGTGCTAGATACATCCATTTGAG 58.386 41.667 0.00 0.00 0.00 3.02
4105 4587 5.366477 TGGTGCTAGATACATCCATTTGAGA 59.634 40.000 0.00 0.00 0.00 3.27
4106 4588 5.931146 GGTGCTAGATACATCCATTTGAGAG 59.069 44.000 0.00 0.00 0.00 3.20
4107 4589 6.239430 GGTGCTAGATACATCCATTTGAGAGA 60.239 42.308 0.00 0.00 0.00 3.10
4108 4590 6.644592 GTGCTAGATACATCCATTTGAGAGAC 59.355 42.308 0.00 0.00 0.00 3.36
4109 4591 6.324770 TGCTAGATACATCCATTTGAGAGACA 59.675 38.462 0.00 0.00 0.00 3.41
4110 4592 7.147672 TGCTAGATACATCCATTTGAGAGACAA 60.148 37.037 0.00 0.00 36.65 3.18
4111 4593 7.384660 GCTAGATACATCCATTTGAGAGACAAG 59.615 40.741 0.00 0.00 39.77 3.16
4112 4594 6.054295 AGATACATCCATTTGAGAGACAAGC 58.946 40.000 0.00 0.00 39.77 4.01
4113 4595 4.298103 ACATCCATTTGAGAGACAAGCT 57.702 40.909 0.00 0.00 39.77 3.74
4114 4596 4.660168 ACATCCATTTGAGAGACAAGCTT 58.340 39.130 0.00 0.00 39.77 3.74
4115 4597 5.075493 ACATCCATTTGAGAGACAAGCTTT 58.925 37.500 0.00 0.00 39.77 3.51
4116 4598 5.537674 ACATCCATTTGAGAGACAAGCTTTT 59.462 36.000 0.00 0.00 39.77 2.27
4117 4599 6.041296 ACATCCATTTGAGAGACAAGCTTTTT 59.959 34.615 0.00 0.00 39.77 1.94
4133 4615 2.845363 TTTTTGGACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
4181 4663 1.065418 CACCCTTACATGTCCTGACCC 60.065 57.143 0.00 0.00 0.00 4.46
4278 4760 8.522830 CACAATTAAACTCCACATTTCCTGTAT 58.477 33.333 0.00 0.00 35.91 2.29
4351 4833 4.824479 TCAATGCAGGTGACTTATCTCA 57.176 40.909 0.00 0.00 40.21 3.27
4428 4925 8.761575 TTTCTCAACATTTCAATAATTGCTCC 57.238 30.769 0.00 0.00 0.00 4.70
4625 5128 0.395311 GCTAAACCCACTAAGCCCCC 60.395 60.000 0.00 0.00 0.00 5.40
4928 5471 3.245016 TGAGATGAGGAAGCCATTGTTGT 60.245 43.478 0.00 0.00 0.00 3.32
4952 5497 3.068881 CCACCATGTCTGTCGGGT 58.931 61.111 0.00 0.00 0.00 5.28
4960 5505 2.847234 TCTGTCGGGTGGTTGGCT 60.847 61.111 0.00 0.00 0.00 4.75
5046 5600 2.975536 CGTACATGGTCGGGGTGT 59.024 61.111 0.00 0.00 0.00 4.16
5065 5619 1.067213 GTGGTGAGGCAGAGAGAACTC 60.067 57.143 0.00 0.00 42.90 3.01
5351 5950 0.034896 CCACCGTAGCCTCAACAACT 59.965 55.000 0.00 0.00 0.00 3.16
5356 5955 1.826385 GTAGCCTCAACAACTGCCAT 58.174 50.000 0.00 0.00 0.00 4.40
5366 5965 2.894257 AACTGCCATGTCGGAGCCA 61.894 57.895 0.00 0.00 36.56 4.75
5463 6063 3.736732 TTCCGCGTTCACAACCGGT 62.737 57.895 0.00 0.00 42.23 5.28
5545 6146 0.321653 GTGAACTTCCAGGCCGTGAT 60.322 55.000 0.00 0.00 0.00 3.06
6124 6807 0.517316 GTTCGCAAGTCGCCTGAAAT 59.483 50.000 0.00 0.00 37.30 2.17
6374 7076 2.022035 ACTTCCTCCCTGGGACATGATA 60.022 50.000 12.53 0.00 38.20 2.15
6380 7089 4.586001 CCTCCCTGGGACATGATATTTTTG 59.414 45.833 12.53 0.00 38.20 2.44
6478 7188 6.369059 AGCCATTTGATCTGTTTATCGAAG 57.631 37.500 0.00 0.00 33.71 3.79
6650 7360 7.036863 TGGAATACCTTAGGAAAATGTCCTTCT 60.037 37.037 4.77 0.00 45.22 2.85
6701 7411 4.015406 TTCATCGCCAGGCACGGT 62.015 61.111 13.30 0.00 0.00 4.83
6959 7673 6.781138 TGATGCTCGTTGTAATGTTATTTCC 58.219 36.000 0.00 0.00 0.00 3.13
7249 7970 7.660208 GGTACATGGTCCTAATCACGAATATTT 59.340 37.037 0.00 0.00 0.00 1.40
7362 8083 6.374333 TGACATGGGTATCTTTCTAAAAGCAC 59.626 38.462 0.00 0.00 0.00 4.40
7435 8156 4.124238 CTCACCACCGTTCTTTCTTTGTA 58.876 43.478 0.00 0.00 0.00 2.41
7472 8193 4.764050 TCAGTTTCCAGTTTCTGTACCA 57.236 40.909 0.00 0.00 0.00 3.25
7510 8836 6.378661 TCCTCTATGGTTCCCAATCATATG 57.621 41.667 0.00 0.00 36.95 1.78
7544 8870 2.572191 AATGGAACTGCATTGCGATG 57.428 45.000 9.80 9.80 36.32 3.84
7577 8903 6.128363 GCAAGACAAAATAGTGTGGTACTACC 60.128 42.308 6.93 0.00 44.30 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 3.434309 CCATCAGGTCAGGTTTGGAAAT 58.566 45.455 0.00 0.00 0.00 2.17
130 131 1.519455 CCCGGACAGATCTTCGTGC 60.519 63.158 0.73 0.00 0.00 5.34
157 158 2.680352 ACGCGATCCAGGGTGAGT 60.680 61.111 15.93 0.00 35.90 3.41
520 521 3.014623 ACATGACTAAGACGTCGGATGA 58.985 45.455 10.46 0.00 36.71 2.92
521 522 3.108881 CACATGACTAAGACGTCGGATG 58.891 50.000 10.46 9.39 36.71 3.51
522 523 2.099263 CCACATGACTAAGACGTCGGAT 59.901 50.000 10.46 3.30 36.71 4.18
523 524 1.471287 CCACATGACTAAGACGTCGGA 59.529 52.381 10.46 0.70 36.71 4.55
524 525 1.469251 CCCACATGACTAAGACGTCGG 60.469 57.143 10.46 7.26 36.71 4.79
525 526 1.469251 CCCCACATGACTAAGACGTCG 60.469 57.143 10.46 0.00 36.71 5.12
526 527 1.134788 CCCCCACATGACTAAGACGTC 60.135 57.143 7.70 7.70 34.52 4.34
527 528 0.902531 CCCCCACATGACTAAGACGT 59.097 55.000 0.00 0.00 0.00 4.34
528 529 0.902531 ACCCCCACATGACTAAGACG 59.097 55.000 0.00 0.00 0.00 4.18
529 530 1.679032 GCACCCCCACATGACTAAGAC 60.679 57.143 0.00 0.00 0.00 3.01
530 531 0.618458 GCACCCCCACATGACTAAGA 59.382 55.000 0.00 0.00 0.00 2.10
531 532 0.394352 GGCACCCCCACATGACTAAG 60.394 60.000 0.00 0.00 0.00 2.18
532 533 1.136961 TGGCACCCCCACATGACTAA 61.137 55.000 0.00 0.00 39.18 2.24
533 534 1.540118 TGGCACCCCCACATGACTA 60.540 57.895 0.00 0.00 39.18 2.59
534 535 2.858476 TGGCACCCCCACATGACT 60.858 61.111 0.00 0.00 39.18 3.41
535 536 2.215451 ATCTGGCACCCCCACATGAC 62.215 60.000 0.00 0.00 39.18 3.06
536 537 1.925285 GATCTGGCACCCCCACATGA 61.925 60.000 0.00 0.00 39.18 3.07
537 538 1.454479 GATCTGGCACCCCCACATG 60.454 63.158 0.00 0.00 39.18 3.21
538 539 1.620589 AGATCTGGCACCCCCACAT 60.621 57.895 0.00 0.00 39.18 3.21
539 540 2.204136 AGATCTGGCACCCCCACA 60.204 61.111 0.00 0.00 39.18 4.17
540 541 2.273449 CAGATCTGGCACCCCCAC 59.727 66.667 15.38 0.00 39.18 4.61
541 542 3.016971 CCAGATCTGGCACCCCCA 61.017 66.667 28.45 0.00 44.73 4.96
550 551 2.995283 TGCCATTGAACTCCAGATCTG 58.005 47.619 16.24 16.24 0.00 2.90
551 552 3.053842 ACATGCCATTGAACTCCAGATCT 60.054 43.478 0.00 0.00 0.00 2.75
552 553 3.285484 ACATGCCATTGAACTCCAGATC 58.715 45.455 0.00 0.00 0.00 2.75
553 554 3.285484 GACATGCCATTGAACTCCAGAT 58.715 45.455 0.00 0.00 0.00 2.90
554 555 2.618816 GGACATGCCATTGAACTCCAGA 60.619 50.000 0.00 0.00 36.34 3.86
555 556 1.747355 GGACATGCCATTGAACTCCAG 59.253 52.381 0.00 0.00 36.34 3.86
556 557 1.838112 GGACATGCCATTGAACTCCA 58.162 50.000 0.00 0.00 36.34 3.86
557 558 0.734889 CGGACATGCCATTGAACTCC 59.265 55.000 0.00 0.00 35.94 3.85
558 559 0.734889 CCGGACATGCCATTGAACTC 59.265 55.000 0.00 0.00 35.94 3.01
559 560 0.680921 CCCGGACATGCCATTGAACT 60.681 55.000 0.73 0.00 35.94 3.01
560 561 1.666209 CCCCGGACATGCCATTGAAC 61.666 60.000 0.73 0.00 35.94 3.18
561 562 1.379710 CCCCGGACATGCCATTGAA 60.380 57.895 0.73 0.00 35.94 2.69
562 563 2.275089 CCCCGGACATGCCATTGA 59.725 61.111 0.73 0.00 35.94 2.57
563 564 2.044053 ACCCCGGACATGCCATTG 60.044 61.111 0.73 0.00 35.94 2.82
564 565 2.044053 CACCCCGGACATGCCATT 60.044 61.111 0.73 0.00 35.94 3.16
565 566 2.917897 AACACCCCGGACATGCCAT 61.918 57.895 0.73 0.00 35.94 4.40
566 567 3.575247 AACACCCCGGACATGCCA 61.575 61.111 0.73 0.00 35.94 4.92
567 568 3.061848 CAACACCCCGGACATGCC 61.062 66.667 0.73 0.00 0.00 4.40
568 569 3.747976 GCAACACCCCGGACATGC 61.748 66.667 0.73 2.07 0.00 4.06
569 570 3.061848 GGCAACACCCCGGACATG 61.062 66.667 0.73 0.00 0.00 3.21
578 579 2.764637 AATCAGACCGGGGCAACACC 62.765 60.000 6.32 0.00 35.43 4.16
579 580 1.303317 AATCAGACCGGGGCAACAC 60.303 57.895 6.32 0.00 39.74 3.32
580 581 1.002624 GAATCAGACCGGGGCAACA 60.003 57.895 6.32 0.00 39.74 3.33
581 582 2.106683 CGAATCAGACCGGGGCAAC 61.107 63.158 6.32 0.00 0.00 4.17
582 583 2.119484 AACGAATCAGACCGGGGCAA 62.119 55.000 6.32 0.00 0.00 4.52
583 584 2.515996 GAACGAATCAGACCGGGGCA 62.516 60.000 6.32 0.00 0.00 5.36
584 585 1.814169 GAACGAATCAGACCGGGGC 60.814 63.158 6.32 0.00 0.00 5.80
585 586 0.036765 TTGAACGAATCAGACCGGGG 60.037 55.000 6.32 0.00 39.77 5.73
586 587 1.665679 CATTGAACGAATCAGACCGGG 59.334 52.381 6.32 0.00 39.77 5.73
587 588 1.665679 CCATTGAACGAATCAGACCGG 59.334 52.381 0.00 0.00 39.77 5.28
588 589 1.062587 GCCATTGAACGAATCAGACCG 59.937 52.381 0.00 0.00 39.77 4.79
589 590 2.083774 TGCCATTGAACGAATCAGACC 58.916 47.619 0.00 0.00 39.77 3.85
590 591 3.829886 TTGCCATTGAACGAATCAGAC 57.170 42.857 0.00 0.00 39.77 3.51
591 592 4.009002 TCATTGCCATTGAACGAATCAGA 58.991 39.130 0.00 0.00 39.77 3.27
592 593 4.359971 TCATTGCCATTGAACGAATCAG 57.640 40.909 0.00 0.00 39.77 2.90
593 594 4.987408 ATCATTGCCATTGAACGAATCA 57.013 36.364 0.00 0.00 35.85 2.57
594 595 5.052172 CGAAATCATTGCCATTGAACGAATC 60.052 40.000 0.00 0.00 0.00 2.52
595 596 4.799949 CGAAATCATTGCCATTGAACGAAT 59.200 37.500 0.00 0.00 0.00 3.34
596 597 4.165036 CGAAATCATTGCCATTGAACGAA 58.835 39.130 0.00 0.00 0.00 3.85
597 598 3.757184 CGAAATCATTGCCATTGAACGA 58.243 40.909 0.00 0.00 0.00 3.85
598 599 2.279659 GCGAAATCATTGCCATTGAACG 59.720 45.455 0.00 2.62 0.00 3.95
599 600 3.912708 GCGAAATCATTGCCATTGAAC 57.087 42.857 0.00 0.00 0.00 3.18
607 608 1.001624 GCCAAAGGCGAAATCATTGC 58.998 50.000 0.00 0.00 39.62 3.56
623 624 4.020617 CTCCAAGGTGGCTCGCCA 62.021 66.667 6.52 6.52 45.02 5.69
624 625 4.785453 CCTCCAAGGTGGCTCGCC 62.785 72.222 0.00 0.00 37.47 5.54
633 634 2.335712 GCTTTGCGGACCTCCAAGG 61.336 63.158 0.00 0.00 42.49 3.61
634 635 1.302832 AGCTTTGCGGACCTCCAAG 60.303 57.895 0.00 0.00 35.14 3.61
635 636 1.600636 CAGCTTTGCGGACCTCCAA 60.601 57.895 0.00 0.00 35.14 3.53
636 637 2.032528 CAGCTTTGCGGACCTCCA 59.967 61.111 0.00 0.00 35.14 3.86
637 638 3.435186 GCAGCTTTGCGGACCTCC 61.435 66.667 0.00 0.00 0.00 4.30
638 639 0.744414 TATGCAGCTTTGCGGACCTC 60.744 55.000 0.00 0.00 37.69 3.85
639 640 0.107017 ATATGCAGCTTTGCGGACCT 60.107 50.000 0.00 0.00 37.69 3.85
640 641 0.308993 GATATGCAGCTTTGCGGACC 59.691 55.000 0.00 0.00 37.69 4.46
641 642 1.016627 TGATATGCAGCTTTGCGGAC 58.983 50.000 0.00 0.00 37.69 4.79
642 643 1.401552 GTTGATATGCAGCTTTGCGGA 59.598 47.619 0.00 0.00 37.69 5.54
643 644 1.132834 TGTTGATATGCAGCTTTGCGG 59.867 47.619 0.00 0.00 37.69 5.69
644 645 2.547913 TGTTGATATGCAGCTTTGCG 57.452 45.000 0.00 0.00 37.69 4.85
645 646 3.554324 CCATTGTTGATATGCAGCTTTGC 59.446 43.478 0.00 0.00 0.00 3.68
646 647 5.001237 TCCATTGTTGATATGCAGCTTTG 57.999 39.130 0.00 0.00 0.00 2.77
647 648 4.441079 GCTCCATTGTTGATATGCAGCTTT 60.441 41.667 0.00 0.00 0.00 3.51
648 649 3.067742 GCTCCATTGTTGATATGCAGCTT 59.932 43.478 0.00 0.00 0.00 3.74
649 650 2.621998 GCTCCATTGTTGATATGCAGCT 59.378 45.455 0.00 0.00 0.00 4.24
650 651 2.288030 GGCTCCATTGTTGATATGCAGC 60.288 50.000 0.00 0.00 0.00 5.25
651 652 2.031420 CGGCTCCATTGTTGATATGCAG 60.031 50.000 0.00 0.00 0.00 4.41
652 653 1.948834 CGGCTCCATTGTTGATATGCA 59.051 47.619 0.00 0.00 0.00 3.96
653 654 1.335324 GCGGCTCCATTGTTGATATGC 60.335 52.381 0.00 0.00 0.00 3.14
654 655 1.069703 CGCGGCTCCATTGTTGATATG 60.070 52.381 0.00 0.00 0.00 1.78
655 656 1.229428 CGCGGCTCCATTGTTGATAT 58.771 50.000 0.00 0.00 0.00 1.63
656 657 0.107897 ACGCGGCTCCATTGTTGATA 60.108 50.000 12.47 0.00 0.00 2.15
657 658 0.960364 AACGCGGCTCCATTGTTGAT 60.960 50.000 12.47 0.00 0.00 2.57
658 659 1.599518 AACGCGGCTCCATTGTTGA 60.600 52.632 12.47 0.00 0.00 3.18
659 660 1.442520 CAACGCGGCTCCATTGTTG 60.443 57.895 12.47 0.00 34.64 3.33
660 661 1.577328 CTCAACGCGGCTCCATTGTT 61.577 55.000 12.47 0.00 0.00 2.83
661 662 2.031919 TCAACGCGGCTCCATTGT 59.968 55.556 12.47 0.00 0.00 2.71
662 663 2.787249 CTCAACGCGGCTCCATTG 59.213 61.111 12.47 4.61 0.00 2.82
663 664 3.127533 GCTCAACGCGGCTCCATT 61.128 61.111 12.47 0.00 0.00 3.16
664 665 4.087892 AGCTCAACGCGGCTCCAT 62.088 61.111 12.47 0.00 45.59 3.41
665 666 4.742201 GAGCTCAACGCGGCTCCA 62.742 66.667 20.21 0.00 46.32 3.86
671 672 4.717629 TCACCCGAGCTCAACGCG 62.718 66.667 15.40 3.53 45.59 6.01
672 673 2.765250 TTCTCACCCGAGCTCAACGC 62.765 60.000 15.40 0.00 39.30 4.84
673 674 0.734253 CTTCTCACCCGAGCTCAACG 60.734 60.000 15.40 0.00 39.30 4.10
674 675 0.390472 CCTTCTCACCCGAGCTCAAC 60.390 60.000 15.40 0.00 39.30 3.18
675 676 0.832135 ACCTTCTCACCCGAGCTCAA 60.832 55.000 15.40 0.00 39.30 3.02
676 677 1.228894 ACCTTCTCACCCGAGCTCA 60.229 57.895 15.40 0.00 39.30 4.26
677 678 1.216710 CACCTTCTCACCCGAGCTC 59.783 63.158 2.73 2.73 39.30 4.09
678 679 0.616111 ATCACCTTCTCACCCGAGCT 60.616 55.000 0.00 0.00 39.30 4.09
679 680 0.179097 GATCACCTTCTCACCCGAGC 60.179 60.000 0.00 0.00 39.30 5.03
680 681 0.461961 GGATCACCTTCTCACCCGAG 59.538 60.000 0.00 0.00 40.98 4.63
681 682 1.320344 CGGATCACCTTCTCACCCGA 61.320 60.000 0.00 0.00 37.87 5.14
682 683 1.141881 CGGATCACCTTCTCACCCG 59.858 63.158 0.00 0.00 0.00 5.28
683 684 0.175989 GACGGATCACCTTCTCACCC 59.824 60.000 0.00 0.00 32.59 4.61
684 685 0.895530 TGACGGATCACCTTCTCACC 59.104 55.000 0.00 0.00 35.76 4.02
685 686 2.969628 ATGACGGATCACCTTCTCAC 57.030 50.000 0.00 0.00 37.79 3.51
686 687 3.981071 AAATGACGGATCACCTTCTCA 57.019 42.857 0.00 0.00 37.79 3.27
705 706 6.263842 CCATCATAGCAGCCATAGAAGAAAAA 59.736 38.462 0.00 0.00 0.00 1.94
706 707 5.766670 CCATCATAGCAGCCATAGAAGAAAA 59.233 40.000 0.00 0.00 0.00 2.29
707 708 5.163163 ACCATCATAGCAGCCATAGAAGAAA 60.163 40.000 0.00 0.00 0.00 2.52
708 709 4.349048 ACCATCATAGCAGCCATAGAAGAA 59.651 41.667 0.00 0.00 0.00 2.52
709 710 3.906218 ACCATCATAGCAGCCATAGAAGA 59.094 43.478 0.00 0.00 0.00 2.87
710 711 4.001652 CACCATCATAGCAGCCATAGAAG 58.998 47.826 0.00 0.00 0.00 2.85
711 712 3.808265 GCACCATCATAGCAGCCATAGAA 60.808 47.826 0.00 0.00 0.00 2.10
712 713 2.289882 GCACCATCATAGCAGCCATAGA 60.290 50.000 0.00 0.00 0.00 1.98
713 714 2.082231 GCACCATCATAGCAGCCATAG 58.918 52.381 0.00 0.00 0.00 2.23
714 715 1.271543 GGCACCATCATAGCAGCCATA 60.272 52.381 0.00 0.00 41.63 2.74
715 716 0.538977 GGCACCATCATAGCAGCCAT 60.539 55.000 0.00 0.00 41.63 4.40
716 717 1.152902 GGCACCATCATAGCAGCCA 60.153 57.895 0.00 0.00 41.63 4.75
717 718 2.256591 CGGCACCATCATAGCAGCC 61.257 63.158 0.00 0.00 38.73 4.85
718 719 2.256591 CCGGCACCATCATAGCAGC 61.257 63.158 0.00 0.00 0.00 5.25
719 720 0.602106 CTCCGGCACCATCATAGCAG 60.602 60.000 0.00 0.00 0.00 4.24
720 721 1.447217 CTCCGGCACCATCATAGCA 59.553 57.895 0.00 0.00 0.00 3.49
721 722 1.302033 CCTCCGGCACCATCATAGC 60.302 63.158 0.00 0.00 0.00 2.97
734 735 4.436998 GTCCGTCACCTGCCTCCG 62.437 72.222 0.00 0.00 0.00 4.63
735 736 4.436998 CGTCCGTCACCTGCCTCC 62.437 72.222 0.00 0.00 0.00 4.30
736 737 3.222354 AACGTCCGTCACCTGCCTC 62.222 63.158 0.00 0.00 0.00 4.70
737 738 3.231736 AACGTCCGTCACCTGCCT 61.232 61.111 0.00 0.00 0.00 4.75
738 739 3.041940 CAACGTCCGTCACCTGCC 61.042 66.667 0.00 0.00 0.00 4.85
739 740 3.041940 CCAACGTCCGTCACCTGC 61.042 66.667 0.00 0.00 0.00 4.85
740 741 1.663702 GACCAACGTCCGTCACCTG 60.664 63.158 9.45 0.00 32.40 4.00
741 742 1.397390 AAGACCAACGTCCGTCACCT 61.397 55.000 15.10 0.01 40.12 4.00
742 743 0.531311 AAAGACCAACGTCCGTCACC 60.531 55.000 15.10 0.00 40.12 4.02
743 744 1.259770 GAAAAGACCAACGTCCGTCAC 59.740 52.381 15.10 3.15 40.12 3.67
744 745 1.134759 TGAAAAGACCAACGTCCGTCA 60.135 47.619 15.10 0.00 40.12 4.35
745 746 1.525619 CTGAAAAGACCAACGTCCGTC 59.474 52.381 6.83 6.83 40.12 4.79
746 747 1.134610 ACTGAAAAGACCAACGTCCGT 60.135 47.619 0.00 0.00 40.12 4.69
747 748 1.578583 ACTGAAAAGACCAACGTCCG 58.421 50.000 0.00 0.00 40.12 4.79
748 749 4.102649 CAAAACTGAAAAGACCAACGTCC 58.897 43.478 0.00 0.00 40.12 4.79
749 750 4.729595 ACAAAACTGAAAAGACCAACGTC 58.270 39.130 0.00 0.00 39.50 4.34
750 751 4.216687 TGACAAAACTGAAAAGACCAACGT 59.783 37.500 0.00 0.00 0.00 3.99
751 752 4.728534 TGACAAAACTGAAAAGACCAACG 58.271 39.130 0.00 0.00 0.00 4.10
752 753 6.099341 ACATGACAAAACTGAAAAGACCAAC 58.901 36.000 0.00 0.00 0.00 3.77
753 754 6.279513 ACATGACAAAACTGAAAAGACCAA 57.720 33.333 0.00 0.00 0.00 3.67
754 755 5.448496 CGACATGACAAAACTGAAAAGACCA 60.448 40.000 0.00 0.00 0.00 4.02
755 756 4.970003 CGACATGACAAAACTGAAAAGACC 59.030 41.667 0.00 0.00 0.00 3.85
756 757 4.970003 CCGACATGACAAAACTGAAAAGAC 59.030 41.667 0.00 0.00 0.00 3.01
757 758 4.638421 ACCGACATGACAAAACTGAAAAGA 59.362 37.500 0.00 0.00 0.00 2.52
758 759 4.920376 ACCGACATGACAAAACTGAAAAG 58.080 39.130 0.00 0.00 0.00 2.27
759 760 4.638421 AGACCGACATGACAAAACTGAAAA 59.362 37.500 0.00 0.00 0.00 2.29
760 761 4.196193 AGACCGACATGACAAAACTGAAA 58.804 39.130 0.00 0.00 0.00 2.69
761 762 3.804036 AGACCGACATGACAAAACTGAA 58.196 40.909 0.00 0.00 0.00 3.02
762 763 3.469008 AGACCGACATGACAAAACTGA 57.531 42.857 0.00 0.00 0.00 3.41
763 764 4.552166 AAAGACCGACATGACAAAACTG 57.448 40.909 0.00 0.00 0.00 3.16
764 765 5.763204 ACATAAAGACCGACATGACAAAACT 59.237 36.000 0.00 0.00 0.00 2.66
765 766 5.997385 ACATAAAGACCGACATGACAAAAC 58.003 37.500 0.00 0.00 0.00 2.43
766 767 6.128391 GCTACATAAAGACCGACATGACAAAA 60.128 38.462 0.00 0.00 0.00 2.44
767 768 5.350365 GCTACATAAAGACCGACATGACAAA 59.650 40.000 0.00 0.00 0.00 2.83
768 769 4.868171 GCTACATAAAGACCGACATGACAA 59.132 41.667 0.00 0.00 0.00 3.18
769 770 4.159693 AGCTACATAAAGACCGACATGACA 59.840 41.667 0.00 0.00 0.00 3.58
770 771 4.683832 AGCTACATAAAGACCGACATGAC 58.316 43.478 0.00 0.00 0.00 3.06
771 772 5.339008 AAGCTACATAAAGACCGACATGA 57.661 39.130 0.00 0.00 0.00 3.07
772 773 8.988064 ATATAAGCTACATAAAGACCGACATG 57.012 34.615 0.00 0.00 0.00 3.21
773 774 9.998106 AAATATAAGCTACATAAAGACCGACAT 57.002 29.630 0.00 0.00 0.00 3.06
774 775 9.826574 AAAATATAAGCTACATAAAGACCGACA 57.173 29.630 0.00 0.00 0.00 4.35
811 812 9.740710 ATGTGTCTCATTCATCATTCATATCAT 57.259 29.630 0.00 0.00 32.08 2.45
817 818 9.276590 GGTAATATGTGTCTCATTCATCATTCA 57.723 33.333 0.00 0.00 37.91 2.57
818 819 9.276590 TGGTAATATGTGTCTCATTCATCATTC 57.723 33.333 0.00 0.00 37.91 2.67
819 820 9.803507 ATGGTAATATGTGTCTCATTCATCATT 57.196 29.630 0.00 0.00 37.91 2.57
820 821 9.227777 CATGGTAATATGTGTCTCATTCATCAT 57.772 33.333 0.00 0.00 37.91 2.45
821 822 8.431222 TCATGGTAATATGTGTCTCATTCATCA 58.569 33.333 0.00 0.00 37.91 3.07
822 823 8.837788 TCATGGTAATATGTGTCTCATTCATC 57.162 34.615 0.00 0.00 37.91 2.92
823 824 9.631257 TTTCATGGTAATATGTGTCTCATTCAT 57.369 29.630 0.00 0.00 37.91 2.57
824 825 9.460019 TTTTCATGGTAATATGTGTCTCATTCA 57.540 29.630 0.00 0.00 37.91 2.57
851 852 2.433436 CCGGCTTAGGCTACTGTTTTT 58.567 47.619 3.89 0.00 38.73 1.94
852 853 1.339727 CCCGGCTTAGGCTACTGTTTT 60.340 52.381 3.89 0.00 38.73 2.43
1170 1171 1.768684 AACCGCCTGAAGCAAGAGGA 61.769 55.000 0.00 0.00 44.04 3.71
1173 1174 1.795170 GCAAACCGCCTGAAGCAAGA 61.795 55.000 0.00 0.00 44.04 3.02
1175 1176 2.074230 CTGCAAACCGCCTGAAGCAA 62.074 55.000 0.00 0.00 44.04 3.91
1177 1178 2.256461 CTGCAAACCGCCTGAAGC 59.744 61.111 0.00 0.00 41.33 3.86
1360 1719 5.266733 ACTGTAGTTTTTACTCGACCACA 57.733 39.130 0.00 0.00 0.00 4.17
1376 1735 7.113684 GCATTGCTAAGTAACGATCTACTGTAG 59.886 40.741 8.55 8.55 32.35 2.74
1483 1930 3.067106 ACGACATGTGTTGATCCAGTTC 58.933 45.455 1.15 0.00 33.65 3.01
1530 1981 8.858003 TGTCAAATTTAAGTGTTTATCGCAAA 57.142 26.923 0.00 0.00 0.00 3.68
1599 2050 6.183361 GGAATCTAACCCCACAGATGATAAGT 60.183 42.308 0.00 0.00 31.87 2.24
1617 2068 3.165875 GGATCATCGACCCAGGAATCTA 58.834 50.000 0.00 0.00 0.00 1.98
1654 2105 7.340232 TCCTCTTTGTCAATTTGAAGGGATATG 59.660 37.037 12.13 0.00 0.00 1.78
1751 2202 5.512942 TTAAATGACTGAGGATCCACCAA 57.487 39.130 15.82 0.00 42.04 3.67
1777 2228 5.104735 AGGTCTTTTCAATAGGCTCTCGAAT 60.105 40.000 0.00 0.00 0.00 3.34
1807 2258 1.434188 TCTCTTTGGCTGAACTCCCA 58.566 50.000 0.00 0.00 0.00 4.37
1933 2384 8.608185 AATATATGAGTTGAAAATGGGGTTGT 57.392 30.769 0.00 0.00 0.00 3.32
1986 2438 7.796838 ACATGATCGTAAATTGGTTGATATCG 58.203 34.615 0.00 0.00 0.00 2.92
2001 2453 6.873997 AGTCCAACTATTGAACATGATCGTA 58.126 36.000 0.00 0.00 0.00 3.43
2257 2709 8.489990 GTCTTATACCACCTTTTAAAGAGTCC 57.510 38.462 6.24 0.00 0.00 3.85
2342 2794 7.306213 AGTGTTATATTCGACATGATACTCGG 58.694 38.462 0.00 0.00 0.00 4.63
2415 2867 7.663905 TGCAAAAAGATACTGTTAGCTTCCTTA 59.336 33.333 0.00 0.00 32.60 2.69
2600 3052 1.754226 TCACGGTCATATAGTGCAGCA 59.246 47.619 0.00 0.00 35.97 4.41
3226 3678 3.788227 AGTTGGCACCATTCTTAGTGA 57.212 42.857 0.00 0.00 36.01 3.41
3349 3801 2.159142 CGTTATGTTTCGGTAGAGGGCT 60.159 50.000 0.00 0.00 0.00 5.19
3350 3802 2.199236 CGTTATGTTTCGGTAGAGGGC 58.801 52.381 0.00 0.00 0.00 5.19
3351 3803 3.515330 ACGTTATGTTTCGGTAGAGGG 57.485 47.619 0.00 0.00 0.00 4.30
3352 3804 4.240096 ACAACGTTATGTTTCGGTAGAGG 58.760 43.478 0.00 0.00 39.29 3.69
3353 3805 5.389098 CCAACAACGTTATGTTTCGGTAGAG 60.389 44.000 0.00 0.00 41.44 2.43
3354 3806 4.448395 CCAACAACGTTATGTTTCGGTAGA 59.552 41.667 0.00 0.00 41.44 2.59
3355 3807 4.448395 TCCAACAACGTTATGTTTCGGTAG 59.552 41.667 0.00 0.00 41.44 3.18
3356 3808 4.375272 TCCAACAACGTTATGTTTCGGTA 58.625 39.130 0.00 0.00 41.44 4.02
3369 3821 4.363999 TGGCTTAACAAATTCCAACAACG 58.636 39.130 0.00 0.00 0.00 4.10
3579 4048 7.272978 TCTCTGAACCCAGCTACAAATATTAC 58.727 38.462 0.00 0.00 40.20 1.89
3580 4049 7.125811 ACTCTCTGAACCCAGCTACAAATATTA 59.874 37.037 0.00 0.00 40.20 0.98
3591 4060 5.510520 CCAGATTATACTCTCTGAACCCAGC 60.511 48.000 7.43 0.00 41.13 4.85
3755 4237 3.442625 GGGTGCCACCAACTATCTTAAAC 59.557 47.826 17.22 0.00 41.02 2.01
3848 4330 3.014604 ACACGAAGCTACTTGACTGAC 57.985 47.619 0.00 0.00 0.00 3.51
3864 4346 4.558470 GCATCAACATTGGATAACAACACG 59.442 41.667 0.00 0.00 42.94 4.49
4020 4502 1.666872 AAGCTTTTCCGGACGGACG 60.667 57.895 13.76 6.26 45.11 4.79
4021 4503 0.883370 ACAAGCTTTTCCGGACGGAC 60.883 55.000 13.76 1.81 45.11 4.79
4022 4504 0.601841 GACAAGCTTTTCCGGACGGA 60.602 55.000 1.83 9.76 43.52 4.69
4023 4505 1.574702 GGACAAGCTTTTCCGGACGG 61.575 60.000 15.65 3.96 0.00 4.79
4024 4506 1.574702 GGGACAAGCTTTTCCGGACG 61.575 60.000 22.30 0.00 32.00 4.79
4025 4507 0.536460 TGGGACAAGCTTTTCCGGAC 60.536 55.000 22.30 11.43 31.92 4.79
4026 4508 1.840598 TGGGACAAGCTTTTCCGGA 59.159 52.632 22.30 10.91 31.92 5.14
4027 4509 4.492604 TGGGACAAGCTTTTCCGG 57.507 55.556 22.30 0.00 31.92 5.14
4036 4518 4.249028 TTGAAGGACAAGCTTGGGACAAG 61.249 47.826 29.18 3.71 37.48 3.16
4037 4519 2.357673 TTGAAGGACAAGCTTGGGACAA 60.358 45.455 29.18 21.59 37.48 3.18
4038 4520 0.843309 TGAAGGACAAGCTTGGGACA 59.157 50.000 29.18 17.71 0.00 4.02
4039 4521 1.981256 TTGAAGGACAAGCTTGGGAC 58.019 50.000 29.18 18.22 34.20 4.46
4040 4522 2.746279 TTTGAAGGACAAGCTTGGGA 57.254 45.000 29.18 4.51 39.77 4.37
4041 4523 2.028748 CCATTTGAAGGACAAGCTTGGG 60.029 50.000 29.18 13.19 39.77 4.12
4042 4524 2.892852 TCCATTTGAAGGACAAGCTTGG 59.107 45.455 29.18 12.28 39.77 3.61
4043 4525 4.021719 ACATCCATTTGAAGGACAAGCTTG 60.022 41.667 24.84 24.84 39.77 4.01
4044 4526 4.154942 ACATCCATTTGAAGGACAAGCTT 58.845 39.130 0.00 0.00 39.77 3.74
4045 4527 3.771216 ACATCCATTTGAAGGACAAGCT 58.229 40.909 0.00 0.00 39.77 3.74
4046 4528 5.591877 AGATACATCCATTTGAAGGACAAGC 59.408 40.000 0.00 0.00 39.77 4.01
4047 4529 8.737168 TTAGATACATCCATTTGAAGGACAAG 57.263 34.615 0.00 0.00 39.77 3.16
4049 4531 9.778741 GTATTAGATACATCCATTTGAAGGACA 57.221 33.333 0.00 0.00 38.13 4.02
4060 4542 9.502091 GCACCAAATTAGTATTAGATACATCCA 57.498 33.333 1.42 0.00 38.21 3.41
4061 4543 9.726438 AGCACCAAATTAGTATTAGATACATCC 57.274 33.333 1.42 0.00 38.21 3.51
4071 4553 9.726438 GGATGTATCTAGCACCAAATTAGTATT 57.274 33.333 0.00 0.00 0.00 1.89
4072 4554 8.880244 TGGATGTATCTAGCACCAAATTAGTAT 58.120 33.333 0.00 0.00 0.00 2.12
4073 4555 8.257602 TGGATGTATCTAGCACCAAATTAGTA 57.742 34.615 0.00 0.00 0.00 1.82
4074 4556 7.136822 TGGATGTATCTAGCACCAAATTAGT 57.863 36.000 0.00 0.00 0.00 2.24
4075 4557 8.627208 AATGGATGTATCTAGCACCAAATTAG 57.373 34.615 0.00 0.00 0.00 1.73
4076 4558 8.849168 CAAATGGATGTATCTAGCACCAAATTA 58.151 33.333 0.00 0.00 0.00 1.40
4077 4559 7.560991 TCAAATGGATGTATCTAGCACCAAATT 59.439 33.333 0.00 0.00 0.00 1.82
4078 4560 7.062322 TCAAATGGATGTATCTAGCACCAAAT 58.938 34.615 0.00 0.00 0.00 2.32
4079 4561 6.422333 TCAAATGGATGTATCTAGCACCAAA 58.578 36.000 0.00 0.00 0.00 3.28
4080 4562 6.000246 TCAAATGGATGTATCTAGCACCAA 58.000 37.500 0.00 0.00 0.00 3.67
4081 4563 5.366477 TCTCAAATGGATGTATCTAGCACCA 59.634 40.000 0.00 0.00 0.00 4.17
4082 4564 5.858381 TCTCAAATGGATGTATCTAGCACC 58.142 41.667 0.00 0.00 0.00 5.01
4083 4565 6.644592 GTCTCTCAAATGGATGTATCTAGCAC 59.355 42.308 0.00 0.00 0.00 4.40
4084 4566 6.324770 TGTCTCTCAAATGGATGTATCTAGCA 59.675 38.462 0.00 0.00 0.00 3.49
4085 4567 6.753180 TGTCTCTCAAATGGATGTATCTAGC 58.247 40.000 0.00 0.00 0.00 3.42
4086 4568 7.384660 GCTTGTCTCTCAAATGGATGTATCTAG 59.615 40.741 0.00 0.00 35.48 2.43
4087 4569 7.070447 AGCTTGTCTCTCAAATGGATGTATCTA 59.930 37.037 0.00 0.00 35.48 1.98
4088 4570 6.054295 GCTTGTCTCTCAAATGGATGTATCT 58.946 40.000 0.00 0.00 35.48 1.98
4089 4571 6.054295 AGCTTGTCTCTCAAATGGATGTATC 58.946 40.000 0.00 0.00 35.48 2.24
4090 4572 5.999044 AGCTTGTCTCTCAAATGGATGTAT 58.001 37.500 0.00 0.00 35.48 2.29
4091 4573 5.426689 AGCTTGTCTCTCAAATGGATGTA 57.573 39.130 0.00 0.00 35.48 2.29
4092 4574 4.298103 AGCTTGTCTCTCAAATGGATGT 57.702 40.909 0.00 0.00 35.48 3.06
4093 4575 5.640189 AAAGCTTGTCTCTCAAATGGATG 57.360 39.130 0.00 0.00 35.48 3.51
4094 4576 6.661304 AAAAAGCTTGTCTCTCAAATGGAT 57.339 33.333 0.00 0.00 35.48 3.41
4114 4596 1.348696 GGTACTCCCTCCGTCCAAAAA 59.651 52.381 0.00 0.00 0.00 1.94
4115 4597 0.978907 GGTACTCCCTCCGTCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
4116 4598 0.178926 TGGTACTCCCTCCGTCCAAA 60.179 55.000 0.00 0.00 0.00 3.28
4117 4599 0.042131 ATGGTACTCCCTCCGTCCAA 59.958 55.000 0.00 0.00 0.00 3.53
4118 4600 0.686441 CATGGTACTCCCTCCGTCCA 60.686 60.000 0.00 0.00 0.00 4.02
4119 4601 2.029307 GCATGGTACTCCCTCCGTCC 62.029 65.000 0.00 0.00 0.00 4.79
4120 4602 1.043673 AGCATGGTACTCCCTCCGTC 61.044 60.000 0.00 0.00 0.00 4.79
4121 4603 1.001760 AGCATGGTACTCCCTCCGT 59.998 57.895 0.00 0.00 0.00 4.69
4122 4604 1.043116 TCAGCATGGTACTCCCTCCG 61.043 60.000 0.00 0.00 36.16 4.63
4123 4605 1.139853 CTTCAGCATGGTACTCCCTCC 59.860 57.143 0.00 0.00 36.16 4.30
4124 4606 2.102252 CTCTTCAGCATGGTACTCCCTC 59.898 54.545 0.00 0.00 36.16 4.30
4125 4607 2.114616 CTCTTCAGCATGGTACTCCCT 58.885 52.381 0.00 0.00 36.16 4.20
4126 4608 2.111384 TCTCTTCAGCATGGTACTCCC 58.889 52.381 0.00 0.00 36.16 4.30
4127 4609 4.125703 CAATCTCTTCAGCATGGTACTCC 58.874 47.826 0.00 0.00 36.16 3.85
4128 4610 3.559242 GCAATCTCTTCAGCATGGTACTC 59.441 47.826 0.00 0.00 36.16 2.59
4129 4611 3.199508 AGCAATCTCTTCAGCATGGTACT 59.800 43.478 0.00 0.00 36.16 2.73
4130 4612 3.539604 AGCAATCTCTTCAGCATGGTAC 58.460 45.455 0.00 0.00 36.16 3.34
4131 4613 3.198417 TGAGCAATCTCTTCAGCATGGTA 59.802 43.478 0.00 0.00 40.03 3.25
4132 4614 2.026542 TGAGCAATCTCTTCAGCATGGT 60.027 45.455 0.00 0.00 40.03 3.55
4133 4615 2.640184 TGAGCAATCTCTTCAGCATGG 58.360 47.619 0.00 0.00 40.03 3.66
4263 4745 6.712095 GCAGAATATCATACAGGAAATGTGGA 59.288 38.462 0.00 0.00 43.80 4.02
4278 4760 7.801716 GTAAATGGTTACCTGCAGAATATCA 57.198 36.000 17.39 6.31 34.62 2.15
4625 5128 0.318441 TCGGTCTGCCTCTCTTGTTG 59.682 55.000 0.00 0.00 0.00 3.33
4928 5471 2.284625 AGACATGGTGGCTCCGGA 60.285 61.111 2.93 2.93 39.52 5.14
4952 5497 4.659172 CCTTCCGGCAGCCAACCA 62.659 66.667 13.30 0.00 0.00 3.67
4980 5525 2.359850 GCCTTGTGTCCGATGGCA 60.360 61.111 0.00 0.00 42.79 4.92
5035 5588 3.238497 CTCACCACACCCCGACCA 61.238 66.667 0.00 0.00 0.00 4.02
5046 5600 1.261480 GAGTTCTCTCTGCCTCACCA 58.739 55.000 0.00 0.00 37.68 4.17
5065 5619 4.760047 CGTCGCTTCCCCTGGGTG 62.760 72.222 12.71 3.30 36.47 4.61
5142 5709 2.098680 CTCTCGGCTCGTCGACAC 59.901 66.667 17.16 3.93 35.18 3.67
5143 5710 2.047560 TCTCTCGGCTCGTCGACA 60.048 61.111 17.16 1.87 35.18 4.35
5351 5950 4.408821 GGTGGCTCCGACATGGCA 62.409 66.667 0.00 0.00 37.80 4.92
5403 6002 2.525629 TCGTGAAGGTGGCCCTCA 60.526 61.111 0.00 0.00 41.56 3.86
5463 6063 4.560743 TGCTGGTGTTGCGGCTGA 62.561 61.111 0.00 0.00 0.00 4.26
5938 6539 1.339151 ACAATTCTGAGGTTCTCGCCC 60.339 52.381 0.00 0.00 32.35 6.13
6008 6691 8.671384 TGTAGTTAGTTCAGCAATAACAAAGT 57.329 30.769 0.00 0.00 32.92 2.66
6017 6700 9.332502 TCAAAATACTTGTAGTTAGTTCAGCAA 57.667 29.630 0.00 0.00 0.00 3.91
6124 6807 1.434555 CACTTCCACGTGCCGAATTA 58.565 50.000 10.91 0.00 0.00 1.40
6180 6864 2.283388 CCACCAAGCCACTGCCAT 60.283 61.111 0.00 0.00 38.69 4.40
6238 6936 2.032528 CCACCCACACACGCTGAT 59.967 61.111 0.00 0.00 0.00 2.90
6374 7076 7.346751 AGGTGTGTGTTTACAGATCAAAAAT 57.653 32.000 0.00 0.00 37.52 1.82
6380 7089 4.083802 GCTCAAGGTGTGTGTTTACAGATC 60.084 45.833 0.00 0.00 37.52 2.75
6457 7167 6.037500 TCTGCTTCGATAAACAGATCAAATGG 59.962 38.462 0.00 0.00 34.35 3.16
6959 7673 2.793585 GCACATTTGAGCGGTGATCATG 60.794 50.000 0.00 0.00 34.52 3.07
7044 7763 7.234661 AAGAAAAACTTTCCAGTGGTAACAA 57.765 32.000 9.54 0.00 42.39 2.83
7116 7836 6.977502 CAGATTAGTGTCTCGATTCACTGAAT 59.022 38.462 23.63 18.99 43.46 2.57
7196 7917 8.677148 TTTTTGTTAGACTAGCTTGTCAAGAT 57.323 30.769 26.45 12.83 39.27 2.40
7224 7945 8.603242 AAATATTCGTGATTAGGACCATGTAC 57.397 34.615 0.00 0.00 0.00 2.90
7249 7970 6.687604 TGTTGAAAGTTGATCATCTCGACTA 58.312 36.000 6.75 0.00 46.20 2.59
7362 8083 5.766150 TGGTACACAATGAAACAGGAAAG 57.234 39.130 0.00 0.00 0.00 2.62
7446 8167 4.998788 ACAGAAACTGGAAACTGAAAAGC 58.001 39.130 0.00 0.00 35.51 3.51
7472 8193 7.293073 ACCATAGAGGAAATCTTGCATTGTAT 58.707 34.615 0.00 0.00 41.22 2.29
7510 8836 6.570571 GCAGTTCCATTAGGTTTTCTTCCTTC 60.571 42.308 0.00 0.00 36.60 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.