Multiple sequence alignment - TraesCS5D01G107800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G107800 chr5D 100.000 4726 0 0 1 4726 121093381 121088656 0.000000e+00 8728.0
1 TraesCS5D01G107800 chr5D 100.000 1774 0 0 5018 6791 121088364 121086591 0.000000e+00 3277.0
2 TraesCS5D01G107800 chr5D 93.496 246 16 0 82 327 273534961 273534716 3.870000e-97 366.0
3 TraesCS5D01G107800 chr5D 83.007 153 20 6 5833 5979 407984938 407985090 4.270000e-27 134.0
4 TraesCS5D01G107800 chr5B 96.764 4666 119 12 82 4726 134142314 134137660 0.000000e+00 7751.0
5 TraesCS5D01G107800 chr5B 94.472 814 38 6 5018 5826 134137625 134136814 0.000000e+00 1247.0
6 TraesCS5D01G107800 chr5B 88.136 708 46 17 5867 6542 134136565 134135864 0.000000e+00 808.0
7 TraesCS5D01G107800 chr5B 87.069 116 14 1 5834 5948 111211493 111211378 5.530000e-26 130.0
8 TraesCS5D01G107800 chr5B 92.500 40 3 0 5875 5914 400755874 400755913 2.650000e-04 58.4
9 TraesCS5D01G107800 chr5A 96.366 3852 116 10 881 4726 132105857 132102024 0.000000e+00 6316.0
10 TraesCS5D01G107800 chr5A 92.047 1031 43 19 5019 6013 132101989 132100962 0.000000e+00 1413.0
11 TraesCS5D01G107800 chr5A 88.129 834 74 8 82 890 132108655 132107822 0.000000e+00 968.0
12 TraesCS5D01G107800 chr5A 88.710 682 43 15 6022 6671 132100896 132100217 0.000000e+00 802.0
13 TraesCS5D01G107800 chr5A 84.431 334 43 5 1 327 495175380 495175711 3.060000e-83 320.0
14 TraesCS5D01G107800 chr5A 85.106 94 13 1 5857 5949 606810062 606810155 2.020000e-15 95.3
15 TraesCS5D01G107800 chr4D 88.922 334 29 4 1 327 101394464 101394132 8.200000e-109 405.0
16 TraesCS5D01G107800 chr6D 94.309 246 14 0 82 327 114308197 114307952 1.790000e-100 377.0
17 TraesCS5D01G107800 chr6D 93.089 246 17 0 82 327 309349241 309348996 1.800000e-95 361.0
18 TraesCS5D01G107800 chr6D 83.654 312 42 9 2280 2585 83544409 83544101 1.110000e-72 285.0
19 TraesCS5D01G107800 chr6D 83.333 234 27 7 2354 2585 83103646 83103869 8.930000e-49 206.0
20 TraesCS5D01G107800 chr6D 86.525 141 11 6 2459 2592 84029589 84029450 1.530000e-31 148.0
21 TraesCS5D01G107800 chr6D 78.912 147 14 10 2284 2426 84029724 84029591 4.360000e-12 84.2
22 TraesCS5D01G107800 chr6D 92.105 38 3 0 2278 2315 83114420 83114457 3.000000e-03 54.7
23 TraesCS5D01G107800 chr3A 94.215 242 14 0 82 323 121086507 121086748 2.990000e-98 370.0
24 TraesCS5D01G107800 chr7D 93.496 246 16 0 82 327 375390620 375390865 3.870000e-97 366.0
25 TraesCS5D01G107800 chr7D 93.089 246 17 0 82 327 165031698 165031453 1.800000e-95 361.0
26 TraesCS5D01G107800 chr7D 91.837 98 7 1 1 97 99219271 99219174 1.190000e-27 135.0
27 TraesCS5D01G107800 chr6B 93.443 244 16 0 82 325 518686183 518685940 5.010000e-96 363.0
28 TraesCS5D01G107800 chr6B 83.224 304 39 9 2286 2585 159598303 159598008 1.120000e-67 268.0
29 TraesCS5D01G107800 chr6B 80.130 307 31 16 2284 2585 159405904 159405623 1.150000e-47 202.0
30 TraesCS5D01G107800 chr6B 85.567 194 25 3 2398 2589 158146596 158146788 4.150000e-47 200.0
31 TraesCS5D01G107800 chr7B 86.486 296 31 5 1 289 399080140 399079847 3.950000e-82 316.0
32 TraesCS5D01G107800 chr7B 89.634 164 17 0 2365 2528 66198316 66198479 6.900000e-50 209.0
33 TraesCS5D01G107800 chr7B 89.404 151 16 0 328 478 419022561 419022711 2.500000e-44 191.0
34 TraesCS5D01G107800 chr3D 82.727 330 51 6 1 327 362503461 362503787 8.620000e-74 289.0
35 TraesCS5D01G107800 chr3D 91.089 101 7 2 1 100 86488518 86488419 1.190000e-27 135.0
36 TraesCS5D01G107800 chr1B 89.474 152 16 0 328 479 41338876 41339027 6.950000e-45 193.0
37 TraesCS5D01G107800 chr1B 89.032 155 17 0 324 478 644691755 644691909 6.950000e-45 193.0
38 TraesCS5D01G107800 chr1B 85.882 170 22 2 309 478 413894437 413894270 5.410000e-41 180.0
39 TraesCS5D01G107800 chr1B 87.234 94 9 2 5834 5924 67680112 67680019 3.350000e-18 104.0
40 TraesCS5D01G107800 chr7A 89.404 151 16 0 328 478 529163611 529163761 2.500000e-44 191.0
41 TraesCS5D01G107800 chr7A 84.906 106 14 2 5829 5932 466542491 466542596 9.310000e-19 106.0
42 TraesCS5D01G107800 chr4A 88.387 155 17 1 328 482 106895988 106896141 1.160000e-42 185.0
43 TraesCS5D01G107800 chr3B 86.047 172 20 4 308 478 699914271 699914103 1.500000e-41 182.0
44 TraesCS5D01G107800 chr2D 96.512 86 3 0 1 86 275978727 275978812 7.100000e-30 143.0
45 TraesCS5D01G107800 chr2D 93.548 93 6 0 1 93 25431736 25431644 9.180000e-29 139.0
46 TraesCS5D01G107800 chr2D 100.000 30 0 0 793 822 546220500 546220529 1.000000e-03 56.5
47 TraesCS5D01G107800 chr1A 90.566 106 6 4 1 105 307308567 307308669 3.300000e-28 137.0
48 TraesCS5D01G107800 chr6A 87.963 108 9 1 2398 2505 100182152 100182255 2.570000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G107800 chr5D 121086591 121093381 6790 True 6002.500000 8728 100.000 1 6791 2 chr5D.!!$R2 6790
1 TraesCS5D01G107800 chr5B 134135864 134142314 6450 True 3268.666667 7751 93.124 82 6542 3 chr5B.!!$R2 6460
2 TraesCS5D01G107800 chr5A 132100217 132108655 8438 True 2374.750000 6316 91.313 82 6671 4 chr5A.!!$R1 6589

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
48 49 0.028242 CGTCGAAGGGTCTCTGATCG 59.972 60.000 0.0 0.0 34.98 3.69 F
230 231 0.317160 TCACACGGAGCGACAAATCT 59.683 50.000 0.0 0.0 0.00 2.40 F
696 707 0.451783 GAAATCACGTCCATGCACCC 59.548 55.000 0.0 0.0 0.00 4.61 F
1315 3315 0.606944 TGGTGGTAATGTTCGTGGCC 60.607 55.000 0.0 0.0 0.00 5.36 F
1540 3541 1.173913 ATGCCCCTTAGCGTGAAAAC 58.826 50.000 0.0 0.0 34.65 2.43 F
1605 3606 3.060602 ACTAACTCTGCTCTGCGAAAAC 58.939 45.455 0.0 0.0 0.00 2.43 F
2256 4257 3.136443 TGACCACATGTCCTTATGGATCC 59.864 47.826 4.2 4.2 45.29 3.36 F
3748 5751 4.384868 CCAAATATAACGGAAGGTGGGTCT 60.385 45.833 0.0 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1594 3595 2.031683 ACTTTGTTCGGTTTTCGCAGAG 59.968 45.455 0.00 0.00 38.43 3.35 R
1755 3756 2.093500 TCACAGCAACTCACAAGTGACT 60.093 45.455 0.00 0.00 35.36 3.41 R
2664 4665 3.256631 CAGCAGCTTGTTGTTAGGGATTT 59.743 43.478 0.00 0.00 0.00 2.17 R
2709 4710 4.343526 AGATCGAGTGCCTCATCATAGTTT 59.656 41.667 0.00 0.00 0.00 2.66 R
3482 5485 1.615116 CCAAGCTTCCCTGCATCTCAA 60.615 52.381 0.00 0.00 34.99 3.02 R
3748 5751 5.342433 CAGTTTTCAAGCATGTTTGACAGA 58.658 37.500 22.74 7.68 36.84 3.41 R
4392 6401 6.398234 AACATACCATTAACAAACACTGCA 57.602 33.333 0.00 0.00 0.00 4.41 R
5807 7844 0.038159 AGCTTCCAGTTCGACCTTCG 60.038 55.000 0.00 0.00 42.10 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.419264 GTTTGCGATTATGGCATCACA 57.581 42.857 1.65 0.00 40.62 3.58
21 22 3.108144 GTTTGCGATTATGGCATCACAC 58.892 45.455 1.65 0.00 40.62 3.82
22 23 2.035530 TGCGATTATGGCATCACACA 57.964 45.000 1.65 0.00 35.04 3.72
23 24 1.670295 TGCGATTATGGCATCACACAC 59.330 47.619 1.65 0.00 35.04 3.82
24 25 1.670295 GCGATTATGGCATCACACACA 59.330 47.619 1.65 0.00 0.00 3.72
25 26 2.286595 GCGATTATGGCATCACACACAG 60.287 50.000 1.65 0.00 0.00 3.66
26 27 2.938451 CGATTATGGCATCACACACAGT 59.062 45.455 1.65 0.00 0.00 3.55
27 28 3.374988 CGATTATGGCATCACACACAGTT 59.625 43.478 1.65 0.00 0.00 3.16
28 29 4.142622 CGATTATGGCATCACACACAGTTT 60.143 41.667 1.65 0.00 0.00 2.66
29 30 4.764679 TTATGGCATCACACACAGTTTC 57.235 40.909 1.65 0.00 0.00 2.78
30 31 0.943673 TGGCATCACACACAGTTTCG 59.056 50.000 0.00 0.00 0.00 3.46
31 32 0.944386 GGCATCACACACAGTTTCGT 59.056 50.000 0.00 0.00 0.00 3.85
32 33 1.069906 GGCATCACACACAGTTTCGTC 60.070 52.381 0.00 0.00 0.00 4.20
33 34 1.397190 GCATCACACACAGTTTCGTCG 60.397 52.381 0.00 0.00 0.00 5.12
34 35 2.124122 CATCACACACAGTTTCGTCGA 58.876 47.619 0.00 0.00 0.00 4.20
35 36 2.281140 TCACACACAGTTTCGTCGAA 57.719 45.000 2.90 2.90 0.00 3.71
36 37 2.190161 TCACACACAGTTTCGTCGAAG 58.810 47.619 7.86 0.00 0.00 3.79
37 38 1.257936 CACACACAGTTTCGTCGAAGG 59.742 52.381 7.86 4.99 0.00 3.46
38 39 0.859232 CACACAGTTTCGTCGAAGGG 59.141 55.000 7.86 0.54 0.00 3.95
39 40 0.462789 ACACAGTTTCGTCGAAGGGT 59.537 50.000 7.86 1.21 0.00 4.34
40 41 1.137513 CACAGTTTCGTCGAAGGGTC 58.862 55.000 7.86 1.35 0.00 4.46
41 42 1.038280 ACAGTTTCGTCGAAGGGTCT 58.962 50.000 7.86 3.51 0.00 3.85
42 43 1.000496 ACAGTTTCGTCGAAGGGTCTC 60.000 52.381 7.86 0.00 0.00 3.36
43 44 1.269998 CAGTTTCGTCGAAGGGTCTCT 59.730 52.381 7.86 0.00 0.00 3.10
44 45 1.269998 AGTTTCGTCGAAGGGTCTCTG 59.730 52.381 7.86 0.00 0.00 3.35
45 46 1.268899 GTTTCGTCGAAGGGTCTCTGA 59.731 52.381 7.86 0.00 0.00 3.27
46 47 1.835494 TTCGTCGAAGGGTCTCTGAT 58.165 50.000 2.90 0.00 0.00 2.90
47 48 1.380524 TCGTCGAAGGGTCTCTGATC 58.619 55.000 0.00 0.00 0.00 2.92
48 49 0.028242 CGTCGAAGGGTCTCTGATCG 59.972 60.000 0.00 0.00 34.98 3.69
49 50 1.096416 GTCGAAGGGTCTCTGATCGT 58.904 55.000 0.00 0.00 35.20 3.73
50 51 2.286872 GTCGAAGGGTCTCTGATCGTA 58.713 52.381 0.00 0.00 35.20 3.43
51 52 2.288458 GTCGAAGGGTCTCTGATCGTAG 59.712 54.545 0.00 0.00 35.20 3.51
52 53 2.093075 TCGAAGGGTCTCTGATCGTAGT 60.093 50.000 0.00 0.00 35.20 2.73
53 54 2.032302 CGAAGGGTCTCTGATCGTAGTG 59.968 54.545 0.00 0.00 0.00 2.74
54 55 2.810870 AGGGTCTCTGATCGTAGTGT 57.189 50.000 0.00 0.00 0.00 3.55
55 56 2.645802 AGGGTCTCTGATCGTAGTGTC 58.354 52.381 0.00 0.00 0.00 3.67
56 57 1.331138 GGGTCTCTGATCGTAGTGTCG 59.669 57.143 0.00 0.00 0.00 4.35
57 58 1.268133 GGTCTCTGATCGTAGTGTCGC 60.268 57.143 0.00 0.00 0.00 5.19
58 59 0.651031 TCTCTGATCGTAGTGTCGCG 59.349 55.000 0.00 0.00 0.00 5.87
59 60 0.374063 CTCTGATCGTAGTGTCGCGT 59.626 55.000 5.77 0.00 0.00 6.01
60 61 0.800631 TCTGATCGTAGTGTCGCGTT 59.199 50.000 5.77 0.00 0.00 4.84
61 62 2.001872 TCTGATCGTAGTGTCGCGTTA 58.998 47.619 5.77 0.00 0.00 3.18
62 63 2.030091 TCTGATCGTAGTGTCGCGTTAG 59.970 50.000 5.77 0.00 0.00 2.34
63 64 1.110876 GATCGTAGTGTCGCGTTAGC 58.889 55.000 5.77 0.00 40.74 3.09
64 65 0.448990 ATCGTAGTGTCGCGTTAGCA 59.551 50.000 5.77 0.00 45.49 3.49
65 66 0.448990 TCGTAGTGTCGCGTTAGCAT 59.551 50.000 5.77 0.00 45.49 3.79
66 67 0.838229 CGTAGTGTCGCGTTAGCATC 59.162 55.000 5.77 0.00 45.49 3.91
67 68 1.792632 CGTAGTGTCGCGTTAGCATCA 60.793 52.381 5.77 0.00 45.49 3.07
68 69 2.460918 GTAGTGTCGCGTTAGCATCAT 58.539 47.619 5.77 0.00 45.49 2.45
69 70 1.560923 AGTGTCGCGTTAGCATCATC 58.439 50.000 5.77 0.00 45.49 2.92
70 71 0.577269 GTGTCGCGTTAGCATCATCC 59.423 55.000 5.77 0.00 45.49 3.51
71 72 0.459899 TGTCGCGTTAGCATCATCCT 59.540 50.000 5.77 0.00 45.49 3.24
72 73 0.855349 GTCGCGTTAGCATCATCCTG 59.145 55.000 5.77 0.00 45.49 3.86
73 74 0.875908 TCGCGTTAGCATCATCCTGC 60.876 55.000 5.77 0.00 45.49 4.85
74 75 1.153597 CGCGTTAGCATCATCCTGCA 61.154 55.000 0.00 0.00 44.77 4.41
75 76 0.585357 GCGTTAGCATCATCCTGCAG 59.415 55.000 6.78 6.78 44.77 4.41
76 77 1.945387 CGTTAGCATCATCCTGCAGT 58.055 50.000 13.81 0.00 44.77 4.40
77 78 1.596260 CGTTAGCATCATCCTGCAGTG 59.404 52.381 13.81 5.40 44.77 3.66
78 79 1.945394 GTTAGCATCATCCTGCAGTGG 59.055 52.381 13.81 0.00 44.77 4.00
79 80 1.206878 TAGCATCATCCTGCAGTGGT 58.793 50.000 13.81 11.79 44.77 4.16
80 81 0.393944 AGCATCATCCTGCAGTGGTG 60.394 55.000 13.81 12.85 44.77 4.17
135 136 5.571784 ACTCGTTCCGTAATACAAGATCA 57.428 39.130 0.00 0.00 0.00 2.92
136 137 6.145338 ACTCGTTCCGTAATACAAGATCAT 57.855 37.500 0.00 0.00 0.00 2.45
230 231 0.317160 TCACACGGAGCGACAAATCT 59.683 50.000 0.00 0.00 0.00 2.40
234 235 0.737715 ACGGAGCGACAAATCTCAGC 60.738 55.000 0.00 0.00 0.00 4.26
265 266 0.944386 CAACCCAACAGACACCTTCG 59.056 55.000 0.00 0.00 0.00 3.79
273 274 3.088789 ACAGACACCTTCGGAGATACT 57.911 47.619 0.00 0.00 35.04 2.12
295 296 6.893583 ACTTGTAGAGCACCTTTATGATCAT 58.106 36.000 13.81 13.81 37.47 2.45
296 297 8.023021 ACTTGTAGAGCACCTTTATGATCATA 57.977 34.615 11.49 11.49 37.47 2.15
343 344 4.466828 CACACACCGAGAGCTTTTATTTG 58.533 43.478 0.00 0.00 0.00 2.32
372 373 9.559958 CACAAAAATAACATCATGGTAGTTCTC 57.440 33.333 0.00 0.00 25.06 2.87
373 374 8.450964 ACAAAAATAACATCATGGTAGTTCTCG 58.549 33.333 0.00 0.00 25.06 4.04
445 446 5.185828 AGAGTCCAAAACAAGAGCAAAAGTT 59.814 36.000 0.00 0.00 0.00 2.66
544 545 7.054124 ACGACAATTACTGAATGGATAATGGT 58.946 34.615 0.00 0.00 0.00 3.55
561 562 0.953960 GGTGCTGTAAAGTGGACCCG 60.954 60.000 0.00 0.00 38.50 5.28
696 707 0.451783 GAAATCACGTCCATGCACCC 59.548 55.000 0.00 0.00 0.00 4.61
768 792 7.956943 CCGTTCGTTATTTAAATCGGTAAACTT 59.043 33.333 3.39 0.00 33.39 2.66
869 895 6.831868 ACCTAAACTTGGTACTGAACATTTGT 59.168 34.615 0.00 0.00 35.80 2.83
1274 3274 4.843220 AGTCGTTACTATAATCGGTGGG 57.157 45.455 0.00 0.00 32.84 4.61
1315 3315 0.606944 TGGTGGTAATGTTCGTGGCC 60.607 55.000 0.00 0.00 0.00 5.36
1540 3541 1.173913 ATGCCCCTTAGCGTGAAAAC 58.826 50.000 0.00 0.00 34.65 2.43
1594 3595 8.846211 AGTAGATCTCATCTTAACTAACTCTGC 58.154 37.037 0.00 0.00 40.76 4.26
1605 3606 3.060602 ACTAACTCTGCTCTGCGAAAAC 58.939 45.455 0.00 0.00 0.00 2.43
1755 3756 3.256136 TCATCTGCAAATGTGATTGTGCA 59.744 39.130 0.00 0.00 44.36 4.57
2252 4253 5.920193 AAATTGACCACATGTCCTTATGG 57.080 39.130 0.00 0.00 43.78 2.74
2256 4257 3.136443 TGACCACATGTCCTTATGGATCC 59.864 47.826 4.20 4.20 45.29 3.36
2375 4376 5.642165 TGTAGGTAGAGGAGATACCCAATC 58.358 45.833 0.00 0.00 43.20 2.67
2664 4665 9.710900 ATAGCTTCAAATGTTGTATCGATGATA 57.289 29.630 8.54 0.00 0.00 2.15
2709 4710 4.631131 CTTACAGATGCATACGGAATGGA 58.369 43.478 0.00 0.00 40.56 3.41
2823 4824 8.287439 TGTGGTCCGTCATTAAAATCATTAAT 57.713 30.769 0.00 0.00 0.00 1.40
2951 4952 5.009310 TCAAATATTCAGGTGATGATGCTGC 59.991 40.000 0.00 0.00 37.89 5.25
3404 5406 8.721478 AGACATTTTAGTTACATTACACTGCTG 58.279 33.333 0.00 0.00 0.00 4.41
3421 5424 6.540189 ACACTGCTGCTTTTTATAGGTCATAG 59.460 38.462 0.00 0.00 0.00 2.23
3748 5751 4.384868 CCAAATATAACGGAAGGTGGGTCT 60.385 45.833 0.00 0.00 0.00 3.85
4503 6512 4.181578 AGTATACAAGTTGACATGTCCGC 58.818 43.478 22.85 14.86 0.00 5.54
4504 6513 1.424403 TACAAGTTGACATGTCCGCG 58.576 50.000 22.85 0.00 0.00 6.46
4505 6514 0.249699 ACAAGTTGACATGTCCGCGA 60.250 50.000 22.85 1.07 0.00 5.87
4506 6515 0.163788 CAAGTTGACATGTCCGCGAC 59.836 55.000 22.85 15.08 0.00 5.19
4533 6542 2.107204 ACTCTTGGATGCAGGTGTTTCT 59.893 45.455 0.00 0.00 0.00 2.52
4632 6641 2.224402 ACAAGCAGTTTCTGACTCCCTC 60.224 50.000 0.66 0.00 36.10 4.30
5277 7286 0.467384 ATCAGGTTCTGGGATCAGCG 59.533 55.000 0.00 0.00 40.69 5.18
5281 7290 2.109126 GTTCTGGGATCAGCGGCAC 61.109 63.158 1.45 0.00 40.69 5.01
5302 7311 0.456221 GATCGAAAGCCGTCAGGAGA 59.544 55.000 0.00 0.00 41.02 3.71
5345 7354 2.227388 AGGCATTGAAAGAAAGCAGTCG 59.773 45.455 0.00 0.00 0.00 4.18
5347 7356 2.226437 GCATTGAAAGAAAGCAGTCGGA 59.774 45.455 0.00 0.00 0.00 4.55
5354 7363 1.168714 GAAAGCAGTCGGAAGGCATT 58.831 50.000 5.15 0.00 38.99 3.56
5405 7438 4.700037 CAGTCGATCGAGAGTGCC 57.300 61.111 20.09 5.48 35.16 5.01
5471 7504 4.357947 GAGGTGACCAGCGACGCA 62.358 66.667 23.70 0.00 0.00 5.24
5511 7544 2.034687 GTGCCCACATGCAGACCT 59.965 61.111 0.00 0.00 43.02 3.85
5533 7566 2.046314 ACCCGCAAACGCATAGCT 60.046 55.556 0.00 0.00 38.22 3.32
5571 7604 6.285224 TGGAATCTGTCGAAGTTCTTGTTAA 58.715 36.000 0.56 0.00 0.00 2.01
5792 7829 4.488126 GCAAGTGCTCTATGTTGTTGAA 57.512 40.909 0.00 0.00 38.21 2.69
5807 7844 4.764679 TGTTGAATGCACATCTGGTAAC 57.235 40.909 0.00 0.00 0.00 2.50
5826 7863 0.038159 CGAAGGTCGAACTGGAAGCT 60.038 55.000 2.28 0.00 43.74 3.74
5865 8110 3.763057 ACGGAGGCAAAAGATTTACCTT 58.237 40.909 0.00 0.00 29.80 3.50
5871 8116 6.183360 GGAGGCAAAAGATTTACCTTATCCAC 60.183 42.308 0.00 0.00 29.80 4.02
5893 8138 4.934602 ACTCATTAAGCAGAAGAGAGTTGC 59.065 41.667 0.00 0.00 38.09 4.17
5906 8151 7.337942 CAGAAGAGAGTTGCCTGGTTAATTAAT 59.662 37.037 0.31 0.00 0.00 1.40
6023 8286 1.050988 CATCGGTCATCACCCTCCCT 61.051 60.000 0.00 0.00 40.01 4.20
6030 8350 2.170817 GTCATCACCCTCCCTAAACTCC 59.829 54.545 0.00 0.00 0.00 3.85
6031 8351 1.490910 CATCACCCTCCCTAAACTCCC 59.509 57.143 0.00 0.00 0.00 4.30
6046 8366 4.379243 CCCAGCAAGCGACTCCGT 62.379 66.667 0.00 0.00 38.24 4.69
6121 8442 0.881118 ACAACGCAATTCCGCATCTT 59.119 45.000 0.00 0.00 0.00 2.40
6200 8527 4.382306 ACACGCAAACAAACAAACAAAG 57.618 36.364 0.00 0.00 0.00 2.77
6219 8546 5.046014 ACAAAGAGAATGAGATGGTAGTGCT 60.046 40.000 0.00 0.00 0.00 4.40
6266 8598 6.568869 TGTCGGTTTGAAACTTTGAATTGAT 58.431 32.000 8.09 0.00 0.00 2.57
6302 8635 2.032071 CGGTGGCGGAAGAAAGGT 59.968 61.111 0.00 0.00 0.00 3.50
6307 8643 0.545787 TGGCGGAAGAAAGGTAGGGA 60.546 55.000 0.00 0.00 0.00 4.20
6308 8644 0.178301 GGCGGAAGAAAGGTAGGGAG 59.822 60.000 0.00 0.00 0.00 4.30
6310 8646 0.831307 CGGAAGAAAGGTAGGGAGGG 59.169 60.000 0.00 0.00 0.00 4.30
6486 8825 1.541588 GTGCTTTCCACCACCTGAATC 59.458 52.381 0.00 0.00 38.55 2.52
6500 8847 3.077359 CCTGAATCCCACTGTTCAAGTC 58.923 50.000 0.00 0.00 36.83 3.01
6536 8883 0.857311 CGTGCGGATTTTGCATCGTC 60.857 55.000 0.00 0.00 45.34 4.20
6560 8912 3.072184 AGGGTTGAGCATAGCTTAGATGG 59.928 47.826 0.00 0.00 39.88 3.51
6564 8916 5.698545 GGTTGAGCATAGCTTAGATGGTTAG 59.301 44.000 0.00 0.00 39.88 2.34
6565 8917 5.474578 TGAGCATAGCTTAGATGGTTAGG 57.525 43.478 0.00 0.00 39.88 2.69
6596 8949 4.015872 TGGAACCAATAGACCAGTGTTC 57.984 45.455 0.00 0.00 0.00 3.18
6598 8951 4.141367 TGGAACCAATAGACCAGTGTTCAA 60.141 41.667 0.00 0.00 0.00 2.69
6599 8952 4.215613 GGAACCAATAGACCAGTGTTCAAC 59.784 45.833 0.00 0.00 0.00 3.18
6603 8956 4.827284 CCAATAGACCAGTGTTCAACCTTT 59.173 41.667 0.00 0.00 0.00 3.11
6619 8972 7.672983 TCAACCTTTCATACTTGAGATGTTC 57.327 36.000 0.00 0.00 32.27 3.18
6620 8973 7.453393 TCAACCTTTCATACTTGAGATGTTCT 58.547 34.615 0.00 0.00 32.27 3.01
6637 8990 1.561643 TCTCATCGACCAAGAGGCTT 58.438 50.000 0.00 0.00 39.06 4.35
6638 8991 1.902508 TCTCATCGACCAAGAGGCTTT 59.097 47.619 0.00 0.00 39.06 3.51
6639 8992 2.093973 TCTCATCGACCAAGAGGCTTTC 60.094 50.000 0.00 0.00 39.06 2.62
6640 8993 1.002366 CATCGACCAAGAGGCTTTCG 58.998 55.000 0.00 0.00 39.06 3.46
6646 8999 1.089920 CCAAGAGGCTTTCGTGATGG 58.910 55.000 0.00 0.00 37.46 3.51
6656 9009 2.093306 TTCGTGATGGCTTCGTCAAT 57.907 45.000 0.00 0.00 38.06 2.57
6661 9014 4.452795 TCGTGATGGCTTCGTCAATTTTAA 59.547 37.500 0.00 0.00 38.06 1.52
6671 9024 6.855914 GCTTCGTCAATTTTAAGATGTTGTGA 59.144 34.615 0.00 0.00 0.00 3.58
6672 9025 7.378461 GCTTCGTCAATTTTAAGATGTTGTGAA 59.622 33.333 0.00 0.00 0.00 3.18
6673 9026 8.555166 TTCGTCAATTTTAAGATGTTGTGAAC 57.445 30.769 0.00 0.00 0.00 3.18
6674 9027 7.925993 TCGTCAATTTTAAGATGTTGTGAACT 58.074 30.769 0.00 0.00 0.00 3.01
6675 9028 8.402472 TCGTCAATTTTAAGATGTTGTGAACTT 58.598 29.630 0.00 0.00 0.00 2.66
6676 9029 8.471457 CGTCAATTTTAAGATGTTGTGAACTTG 58.529 33.333 0.00 0.00 0.00 3.16
6677 9030 9.301153 GTCAATTTTAAGATGTTGTGAACTTGT 57.699 29.630 0.00 0.00 0.00 3.16
6678 9031 9.299963 TCAATTTTAAGATGTTGTGAACTTGTG 57.700 29.630 0.00 0.00 0.00 3.33
6679 9032 9.086336 CAATTTTAAGATGTTGTGAACTTGTGT 57.914 29.630 0.00 0.00 0.00 3.72
6680 9033 8.856490 ATTTTAAGATGTTGTGAACTTGTGTC 57.144 30.769 0.00 0.00 0.00 3.67
6681 9034 4.536364 AAGATGTTGTGAACTTGTGTCG 57.464 40.909 0.00 0.00 0.00 4.35
6682 9035 3.531538 AGATGTTGTGAACTTGTGTCGT 58.468 40.909 0.00 0.00 0.00 4.34
6683 9036 3.555956 AGATGTTGTGAACTTGTGTCGTC 59.444 43.478 0.00 0.00 0.00 4.20
6684 9037 2.967362 TGTTGTGAACTTGTGTCGTCT 58.033 42.857 0.00 0.00 0.00 4.18
6685 9038 2.927477 TGTTGTGAACTTGTGTCGTCTC 59.073 45.455 0.00 0.00 0.00 3.36
6686 9039 3.187700 GTTGTGAACTTGTGTCGTCTCT 58.812 45.455 0.00 0.00 0.00 3.10
6687 9040 3.079960 TGTGAACTTGTGTCGTCTCTC 57.920 47.619 0.00 0.00 0.00 3.20
6688 9041 2.688446 TGTGAACTTGTGTCGTCTCTCT 59.312 45.455 0.00 0.00 0.00 3.10
6689 9042 3.243101 TGTGAACTTGTGTCGTCTCTCTC 60.243 47.826 0.00 0.00 0.00 3.20
6690 9043 3.003897 GTGAACTTGTGTCGTCTCTCTCT 59.996 47.826 0.00 0.00 0.00 3.10
6691 9044 3.251245 TGAACTTGTGTCGTCTCTCTCTC 59.749 47.826 0.00 0.00 0.00 3.20
6692 9045 3.134574 ACTTGTGTCGTCTCTCTCTCT 57.865 47.619 0.00 0.00 0.00 3.10
6693 9046 3.071479 ACTTGTGTCGTCTCTCTCTCTC 58.929 50.000 0.00 0.00 0.00 3.20
6694 9047 3.244422 ACTTGTGTCGTCTCTCTCTCTCT 60.244 47.826 0.00 0.00 0.00 3.10
6695 9048 2.694213 TGTGTCGTCTCTCTCTCTCTG 58.306 52.381 0.00 0.00 0.00 3.35
6696 9049 1.396996 GTGTCGTCTCTCTCTCTCTGC 59.603 57.143 0.00 0.00 0.00 4.26
6697 9050 1.002544 TGTCGTCTCTCTCTCTCTGCA 59.997 52.381 0.00 0.00 0.00 4.41
6698 9051 1.665679 GTCGTCTCTCTCTCTCTGCAG 59.334 57.143 7.63 7.63 0.00 4.41
6699 9052 1.016627 CGTCTCTCTCTCTCTGCAGG 58.983 60.000 15.13 4.77 0.00 4.85
6700 9053 1.392589 GTCTCTCTCTCTCTGCAGGG 58.607 60.000 15.13 11.57 0.00 4.45
6701 9054 0.258484 TCTCTCTCTCTCTGCAGGGG 59.742 60.000 15.13 4.61 0.00 4.79
6702 9055 0.756442 CTCTCTCTCTCTGCAGGGGG 60.756 65.000 15.13 11.50 0.00 5.40
6703 9056 2.364842 TCTCTCTCTGCAGGGGGC 60.365 66.667 15.13 0.00 45.13 5.80
6704 9057 2.365370 CTCTCTCTGCAGGGGGCT 60.365 66.667 15.13 0.00 45.15 5.19
6705 9058 2.364842 TCTCTCTGCAGGGGGCTC 60.365 66.667 15.13 0.00 45.15 4.70
6706 9059 2.686470 CTCTCTGCAGGGGGCTCA 60.686 66.667 15.13 0.00 45.15 4.26
6707 9060 2.203983 TCTCTGCAGGGGGCTCAA 60.204 61.111 15.13 0.00 45.15 3.02
6708 9061 1.617536 TCTCTGCAGGGGGCTCAAT 60.618 57.895 15.13 0.00 45.15 2.57
6709 9062 0.326522 TCTCTGCAGGGGGCTCAATA 60.327 55.000 15.13 0.00 45.15 1.90
6710 9063 0.769873 CTCTGCAGGGGGCTCAATAT 59.230 55.000 15.13 0.00 45.15 1.28
6711 9064 0.767375 TCTGCAGGGGGCTCAATATC 59.233 55.000 15.13 0.00 45.15 1.63
6712 9065 0.769873 CTGCAGGGGGCTCAATATCT 59.230 55.000 5.57 0.00 45.15 1.98
6713 9066 0.767375 TGCAGGGGGCTCAATATCTC 59.233 55.000 0.00 0.00 45.15 2.75
6714 9067 0.321122 GCAGGGGGCTCAATATCTCG 60.321 60.000 0.00 0.00 40.25 4.04
6715 9068 1.342074 CAGGGGGCTCAATATCTCGA 58.658 55.000 0.00 0.00 0.00 4.04
6716 9069 1.694150 CAGGGGGCTCAATATCTCGAA 59.306 52.381 0.00 0.00 0.00 3.71
6717 9070 2.104792 CAGGGGGCTCAATATCTCGAAA 59.895 50.000 0.00 0.00 0.00 3.46
6718 9071 2.370189 AGGGGGCTCAATATCTCGAAAG 59.630 50.000 0.00 0.00 0.00 2.62
6719 9072 2.104963 GGGGGCTCAATATCTCGAAAGT 59.895 50.000 0.00 0.00 0.00 2.66
6720 9073 3.134458 GGGGCTCAATATCTCGAAAGTG 58.866 50.000 0.00 0.00 0.00 3.16
6721 9074 2.545946 GGGCTCAATATCTCGAAAGTGC 59.454 50.000 0.00 0.00 0.00 4.40
6722 9075 3.462021 GGCTCAATATCTCGAAAGTGCT 58.538 45.455 0.00 0.00 0.00 4.40
6723 9076 3.492756 GGCTCAATATCTCGAAAGTGCTC 59.507 47.826 0.00 0.00 0.00 4.26
6724 9077 4.115516 GCTCAATATCTCGAAAGTGCTCA 58.884 43.478 0.00 0.00 0.00 4.26
6725 9078 4.749099 GCTCAATATCTCGAAAGTGCTCAT 59.251 41.667 0.00 0.00 0.00 2.90
6726 9079 5.923114 GCTCAATATCTCGAAAGTGCTCATA 59.077 40.000 0.00 0.00 0.00 2.15
6727 9080 6.089283 GCTCAATATCTCGAAAGTGCTCATAG 59.911 42.308 0.00 0.00 0.00 2.23
6728 9081 6.450545 TCAATATCTCGAAAGTGCTCATAGG 58.549 40.000 0.00 0.00 0.00 2.57
6729 9082 6.265422 TCAATATCTCGAAAGTGCTCATAGGA 59.735 38.462 0.00 0.00 0.00 2.94
6730 9083 4.582701 ATCTCGAAAGTGCTCATAGGAG 57.417 45.455 0.00 0.00 44.33 3.69
6731 9084 3.357203 TCTCGAAAGTGCTCATAGGAGT 58.643 45.455 6.23 0.00 43.37 3.85
6732 9085 4.524053 TCTCGAAAGTGCTCATAGGAGTA 58.476 43.478 6.23 0.00 43.37 2.59
6733 9086 4.576873 TCTCGAAAGTGCTCATAGGAGTAG 59.423 45.833 6.23 0.00 43.37 2.57
6734 9087 4.524053 TCGAAAGTGCTCATAGGAGTAGA 58.476 43.478 6.23 0.00 43.37 2.59
6735 9088 4.576873 TCGAAAGTGCTCATAGGAGTAGAG 59.423 45.833 6.23 0.00 43.37 2.43
6736 9089 4.336993 CGAAAGTGCTCATAGGAGTAGAGT 59.663 45.833 6.23 0.00 43.37 3.24
6737 9090 5.587289 GAAAGTGCTCATAGGAGTAGAGTG 58.413 45.833 6.23 0.00 43.37 3.51
6738 9091 2.955660 AGTGCTCATAGGAGTAGAGTGC 59.044 50.000 6.23 0.00 43.37 4.40
6739 9092 2.690497 GTGCTCATAGGAGTAGAGTGCA 59.310 50.000 6.23 0.00 43.37 4.57
6740 9093 3.320541 GTGCTCATAGGAGTAGAGTGCAT 59.679 47.826 6.23 0.00 43.37 3.96
6741 9094 3.320256 TGCTCATAGGAGTAGAGTGCATG 59.680 47.826 6.23 0.00 43.37 4.06
6742 9095 3.860378 GCTCATAGGAGTAGAGTGCATGC 60.860 52.174 11.82 11.82 43.37 4.06
6743 9096 2.294512 TCATAGGAGTAGAGTGCATGCG 59.705 50.000 14.09 0.00 0.00 4.73
6744 9097 1.763968 TAGGAGTAGAGTGCATGCGT 58.236 50.000 14.09 1.97 0.00 5.24
6745 9098 0.174389 AGGAGTAGAGTGCATGCGTG 59.826 55.000 14.09 0.09 0.00 5.34
6755 9108 4.467084 CATGCGTGCGGGGTAGGT 62.467 66.667 0.00 0.00 0.00 3.08
6756 9109 4.157120 ATGCGTGCGGGGTAGGTC 62.157 66.667 0.00 0.00 0.00 3.85
6758 9111 3.142838 GCGTGCGGGGTAGGTCTA 61.143 66.667 0.00 0.00 0.00 2.59
6759 9112 2.496291 GCGTGCGGGGTAGGTCTAT 61.496 63.158 0.00 0.00 0.00 1.98
6760 9113 1.362717 CGTGCGGGGTAGGTCTATG 59.637 63.158 0.00 0.00 0.00 2.23
6761 9114 1.389609 CGTGCGGGGTAGGTCTATGT 61.390 60.000 0.00 0.00 0.00 2.29
6762 9115 0.104304 GTGCGGGGTAGGTCTATGTG 59.896 60.000 0.00 0.00 0.00 3.21
6763 9116 1.069258 GCGGGGTAGGTCTATGTGC 59.931 63.158 0.00 0.00 0.00 4.57
6764 9117 1.362717 CGGGGTAGGTCTATGTGCG 59.637 63.158 0.00 0.00 0.00 5.34
6765 9118 1.389609 CGGGGTAGGTCTATGTGCGT 61.390 60.000 0.00 0.00 0.00 5.24
6766 9119 0.104304 GGGGTAGGTCTATGTGCGTG 59.896 60.000 0.00 0.00 0.00 5.34
6767 9120 0.822164 GGGTAGGTCTATGTGCGTGT 59.178 55.000 0.00 0.00 0.00 4.49
6768 9121 2.026641 GGGTAGGTCTATGTGCGTGTA 58.973 52.381 0.00 0.00 0.00 2.90
6769 9122 2.626743 GGGTAGGTCTATGTGCGTGTAT 59.373 50.000 0.00 0.00 0.00 2.29
6770 9123 3.822735 GGGTAGGTCTATGTGCGTGTATA 59.177 47.826 0.00 0.00 0.00 1.47
6771 9124 4.320788 GGGTAGGTCTATGTGCGTGTATAC 60.321 50.000 0.00 0.00 0.00 1.47
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.108144 GTGTGATGCCATAATCGCAAAC 58.892 45.455 2.26 0.00 45.84 2.93
1 2 2.751806 TGTGTGATGCCATAATCGCAAA 59.248 40.909 2.26 0.00 45.84 3.68
2 3 2.097304 GTGTGTGATGCCATAATCGCAA 59.903 45.455 2.26 0.00 45.84 4.85
3 4 1.670295 GTGTGTGATGCCATAATCGCA 59.330 47.619 0.00 0.00 43.09 5.10
4 5 1.670295 TGTGTGTGATGCCATAATCGC 59.330 47.619 0.00 0.00 37.54 4.58
5 6 2.938451 ACTGTGTGTGATGCCATAATCG 59.062 45.455 0.00 0.00 0.00 3.34
6 7 4.970662 AACTGTGTGTGATGCCATAATC 57.029 40.909 0.00 0.00 0.00 1.75
7 8 4.142622 CGAAACTGTGTGTGATGCCATAAT 60.143 41.667 0.00 0.00 0.00 1.28
8 9 3.188254 CGAAACTGTGTGTGATGCCATAA 59.812 43.478 0.00 0.00 0.00 1.90
9 10 2.741517 CGAAACTGTGTGTGATGCCATA 59.258 45.455 0.00 0.00 0.00 2.74
10 11 1.536766 CGAAACTGTGTGTGATGCCAT 59.463 47.619 0.00 0.00 0.00 4.40
11 12 0.943673 CGAAACTGTGTGTGATGCCA 59.056 50.000 0.00 0.00 0.00 4.92
12 13 0.944386 ACGAAACTGTGTGTGATGCC 59.056 50.000 0.00 0.00 0.00 4.40
13 14 1.397190 CGACGAAACTGTGTGTGATGC 60.397 52.381 0.00 0.00 0.00 3.91
14 15 2.124122 TCGACGAAACTGTGTGTGATG 58.876 47.619 0.00 0.00 0.00 3.07
15 16 2.502213 TCGACGAAACTGTGTGTGAT 57.498 45.000 0.00 0.00 0.00 3.06
16 17 2.190161 CTTCGACGAAACTGTGTGTGA 58.810 47.619 12.03 0.00 0.00 3.58
17 18 1.257936 CCTTCGACGAAACTGTGTGTG 59.742 52.381 12.03 0.00 0.00 3.82
18 19 1.567504 CCTTCGACGAAACTGTGTGT 58.432 50.000 12.03 0.00 0.00 3.72
19 20 0.859232 CCCTTCGACGAAACTGTGTG 59.141 55.000 12.03 0.00 0.00 3.82
20 21 0.462789 ACCCTTCGACGAAACTGTGT 59.537 50.000 12.03 2.05 0.00 3.72
21 22 1.137513 GACCCTTCGACGAAACTGTG 58.862 55.000 12.03 0.00 0.00 3.66
22 23 1.000496 GAGACCCTTCGACGAAACTGT 60.000 52.381 12.03 8.66 0.00 3.55
23 24 1.269998 AGAGACCCTTCGACGAAACTG 59.730 52.381 12.03 5.54 0.00 3.16
24 25 1.269998 CAGAGACCCTTCGACGAAACT 59.730 52.381 12.03 8.53 0.00 2.66
25 26 1.268899 TCAGAGACCCTTCGACGAAAC 59.731 52.381 12.03 4.05 0.00 2.78
26 27 1.612676 TCAGAGACCCTTCGACGAAA 58.387 50.000 12.03 0.00 0.00 3.46
27 28 1.743958 GATCAGAGACCCTTCGACGAA 59.256 52.381 10.34 10.34 0.00 3.85
28 29 1.380524 GATCAGAGACCCTTCGACGA 58.619 55.000 0.00 0.00 0.00 4.20
29 30 0.028242 CGATCAGAGACCCTTCGACG 59.972 60.000 0.00 0.00 29.06 5.12
30 31 1.096416 ACGATCAGAGACCCTTCGAC 58.904 55.000 0.00 0.00 31.47 4.20
31 32 2.093075 ACTACGATCAGAGACCCTTCGA 60.093 50.000 0.00 0.00 31.47 3.71
32 33 2.032302 CACTACGATCAGAGACCCTTCG 59.968 54.545 0.00 0.00 32.82 3.79
33 34 3.018149 ACACTACGATCAGAGACCCTTC 58.982 50.000 0.00 0.00 0.00 3.46
34 35 3.018149 GACACTACGATCAGAGACCCTT 58.982 50.000 0.00 0.00 0.00 3.95
35 36 2.645802 GACACTACGATCAGAGACCCT 58.354 52.381 0.00 0.00 0.00 4.34
36 37 1.331138 CGACACTACGATCAGAGACCC 59.669 57.143 0.00 0.00 35.09 4.46
37 38 1.268133 GCGACACTACGATCAGAGACC 60.268 57.143 0.00 0.00 35.09 3.85
38 39 1.592590 CGCGACACTACGATCAGAGAC 60.593 57.143 0.00 0.00 35.09 3.36
39 40 0.651031 CGCGACACTACGATCAGAGA 59.349 55.000 0.00 0.00 35.09 3.10
40 41 0.374063 ACGCGACACTACGATCAGAG 59.626 55.000 15.93 0.00 35.09 3.35
41 42 0.800631 AACGCGACACTACGATCAGA 59.199 50.000 15.93 0.00 35.09 3.27
42 43 2.364128 CTAACGCGACACTACGATCAG 58.636 52.381 15.93 0.00 35.09 2.90
43 44 1.530441 GCTAACGCGACACTACGATCA 60.530 52.381 15.93 0.00 35.09 2.92
44 45 1.110876 GCTAACGCGACACTACGATC 58.889 55.000 15.93 0.00 35.09 3.69
45 46 0.448990 TGCTAACGCGACACTACGAT 59.551 50.000 15.93 0.00 39.65 3.73
46 47 0.448990 ATGCTAACGCGACACTACGA 59.551 50.000 15.93 0.00 39.65 3.43
47 48 0.838229 GATGCTAACGCGACACTACG 59.162 55.000 15.93 0.00 39.65 3.51
48 49 1.904144 TGATGCTAACGCGACACTAC 58.096 50.000 15.93 0.00 39.65 2.73
49 50 2.543031 GGATGATGCTAACGCGACACTA 60.543 50.000 15.93 0.00 39.65 2.74
50 51 1.560923 GATGATGCTAACGCGACACT 58.439 50.000 15.93 0.00 39.65 3.55
51 52 0.577269 GGATGATGCTAACGCGACAC 59.423 55.000 15.93 0.00 39.65 3.67
52 53 0.459899 AGGATGATGCTAACGCGACA 59.540 50.000 15.93 5.64 39.65 4.35
53 54 0.855349 CAGGATGATGCTAACGCGAC 59.145 55.000 15.93 0.00 39.69 5.19
54 55 0.875908 GCAGGATGATGCTAACGCGA 60.876 55.000 15.93 0.00 43.07 5.87
55 56 1.153597 TGCAGGATGATGCTAACGCG 61.154 55.000 3.53 3.53 46.63 6.01
56 57 0.585357 CTGCAGGATGATGCTAACGC 59.415 55.000 5.57 0.00 46.63 4.84
57 58 1.596260 CACTGCAGGATGATGCTAACG 59.404 52.381 19.93 0.00 46.63 3.18
58 59 1.945394 CCACTGCAGGATGATGCTAAC 59.055 52.381 19.93 0.00 46.63 2.34
59 60 1.561076 ACCACTGCAGGATGATGCTAA 59.439 47.619 19.93 0.00 46.63 3.09
60 61 1.134310 CACCACTGCAGGATGATGCTA 60.134 52.381 19.93 0.00 46.63 3.49
61 62 0.393944 CACCACTGCAGGATGATGCT 60.394 55.000 19.93 0.00 46.63 3.79
62 63 2.001361 GCACCACTGCAGGATGATGC 62.001 60.000 19.93 13.40 46.68 3.91
63 64 0.393944 AGCACCACTGCAGGATGATG 60.394 55.000 19.93 6.48 46.97 3.07
64 65 1.140452 CTAGCACCACTGCAGGATGAT 59.860 52.381 19.93 13.80 46.97 2.45
65 66 0.538584 CTAGCACCACTGCAGGATGA 59.461 55.000 19.93 0.00 46.97 2.92
66 67 0.251354 ACTAGCACCACTGCAGGATG 59.749 55.000 19.93 13.72 46.97 3.51
67 68 0.987294 AACTAGCACCACTGCAGGAT 59.013 50.000 19.93 0.60 46.97 3.24
68 69 0.321671 GAACTAGCACCACTGCAGGA 59.678 55.000 19.93 0.00 46.97 3.86
69 70 0.035317 TGAACTAGCACCACTGCAGG 59.965 55.000 19.93 4.24 46.97 4.85
70 71 1.882912 TTGAACTAGCACCACTGCAG 58.117 50.000 13.48 13.48 46.97 4.41
71 72 2.038952 AGATTGAACTAGCACCACTGCA 59.961 45.455 0.00 0.00 46.97 4.41
72 73 2.675348 GAGATTGAACTAGCACCACTGC 59.325 50.000 0.00 0.00 44.63 4.40
73 74 2.926200 CGAGATTGAACTAGCACCACTG 59.074 50.000 0.00 0.00 0.00 3.66
74 75 2.563179 ACGAGATTGAACTAGCACCACT 59.437 45.455 0.00 0.00 0.00 4.00
75 76 2.960819 ACGAGATTGAACTAGCACCAC 58.039 47.619 0.00 0.00 0.00 4.16
76 77 3.678056 AACGAGATTGAACTAGCACCA 57.322 42.857 0.00 0.00 0.00 4.17
77 78 4.563184 CAGTAACGAGATTGAACTAGCACC 59.437 45.833 0.00 0.00 0.00 5.01
78 79 4.563184 CCAGTAACGAGATTGAACTAGCAC 59.437 45.833 0.00 0.00 0.00 4.40
79 80 4.744570 CCAGTAACGAGATTGAACTAGCA 58.255 43.478 0.00 0.00 0.00 3.49
80 81 3.552294 GCCAGTAACGAGATTGAACTAGC 59.448 47.826 0.00 0.00 0.00 3.42
230 231 0.462581 GTTGCATGGATCGAGGCTGA 60.463 55.000 15.34 1.80 0.00 4.26
234 235 0.394216 TTGGGTTGCATGGATCGAGG 60.394 55.000 0.00 0.00 0.00 4.63
265 266 5.346181 AAAGGTGCTCTACAAGTATCTCC 57.654 43.478 0.00 0.00 28.38 3.71
273 274 7.791029 TGTATGATCATAAAGGTGCTCTACAA 58.209 34.615 16.97 0.00 0.00 2.41
295 296 4.919206 TCAAACGTCACTTCGTAACTGTA 58.081 39.130 0.00 0.00 43.38 2.74
296 297 3.772932 TCAAACGTCACTTCGTAACTGT 58.227 40.909 0.00 0.00 43.38 3.55
343 344 7.090173 ACTACCATGATGTTATTTTTGTGCAC 58.910 34.615 10.75 10.75 0.00 4.57
372 373 0.437295 GGACCGACGATGTTTTCACG 59.563 55.000 0.00 0.00 0.00 4.35
373 374 0.437295 CGGACCGACGATGTTTTCAC 59.563 55.000 8.64 0.00 35.47 3.18
518 519 7.556275 ACCATTATCCATTCAGTAATTGTCGTT 59.444 33.333 0.00 0.00 0.00 3.85
544 545 0.981183 ATCGGGTCCACTTTACAGCA 59.019 50.000 0.00 0.00 0.00 4.41
670 681 1.358877 TGGACGTGATTTCATCAGCG 58.641 50.000 0.00 6.98 40.53 5.18
777 801 7.973388 CCATCTGAGCTATGCTTAGTAGTTATC 59.027 40.741 10.37 0.02 41.93 1.75
1274 3274 6.096036 CCAATACATCACGAGATCACTATCC 58.904 44.000 0.00 0.00 31.98 2.59
1540 3541 7.230108 ACTGATCCATATAAAAGCAACAGATGG 59.770 37.037 0.00 0.00 34.84 3.51
1594 3595 2.031683 ACTTTGTTCGGTTTTCGCAGAG 59.968 45.455 0.00 0.00 38.43 3.35
1605 3606 4.124238 TCACTCAACCTAACTTTGTTCGG 58.876 43.478 0.35 0.35 0.00 4.30
1755 3756 2.093500 TCACAGCAACTCACAAGTGACT 60.093 45.455 0.00 0.00 35.36 3.41
2252 4253 6.036191 GTCGTTCTTGGATGAAGTAAAGGATC 59.964 42.308 0.00 0.00 32.90 3.36
2256 4257 6.787085 AAGTCGTTCTTGGATGAAGTAAAG 57.213 37.500 0.00 0.00 34.77 1.85
2523 4524 6.435164 AGCAAATATCCCAAGGAAACACTAT 58.565 36.000 0.00 0.00 34.34 2.12
2664 4665 3.256631 CAGCAGCTTGTTGTTAGGGATTT 59.743 43.478 0.00 0.00 0.00 2.17
2709 4710 4.343526 AGATCGAGTGCCTCATCATAGTTT 59.656 41.667 0.00 0.00 0.00 2.66
3404 5406 4.083802 CCGCTGCTATGACCTATAAAAAGC 60.084 45.833 0.00 0.00 0.00 3.51
3421 5424 4.981794 ACAAATTGTATTCTAACCGCTGC 58.018 39.130 0.00 0.00 0.00 5.25
3482 5485 1.615116 CCAAGCTTCCCTGCATCTCAA 60.615 52.381 0.00 0.00 34.99 3.02
3748 5751 5.342433 CAGTTTTCAAGCATGTTTGACAGA 58.658 37.500 22.74 7.68 36.84 3.41
4162 6171 8.936864 ACAGAGTATAATTTGAAAGAACGAAGG 58.063 33.333 0.00 0.00 0.00 3.46
4392 6401 6.398234 AACATACCATTAACAAACACTGCA 57.602 33.333 0.00 0.00 0.00 4.41
4503 6512 1.656095 GCATCCAAGAGTTCGAAGTCG 59.344 52.381 23.66 12.74 41.45 4.18
4504 6513 2.670414 CTGCATCCAAGAGTTCGAAGTC 59.330 50.000 22.81 22.81 0.00 3.01
4505 6514 2.613977 CCTGCATCCAAGAGTTCGAAGT 60.614 50.000 4.86 4.86 0.00 3.01
4506 6515 2.005451 CCTGCATCCAAGAGTTCGAAG 58.995 52.381 0.00 0.00 0.00 3.79
4533 6542 4.487948 GTTTTAGCTCATTCATTGCTGCA 58.512 39.130 0.00 0.00 37.62 4.41
4632 6641 1.070376 CGCATGGCATTGTATCTGACG 60.070 52.381 0.00 0.00 0.00 4.35
5133 7142 4.944619 ATGCGACCTGAGATGAAATAGA 57.055 40.909 0.00 0.00 0.00 1.98
5138 7147 3.234353 AGGATATGCGACCTGAGATGAA 58.766 45.455 0.00 0.00 34.99 2.57
5277 7286 1.696832 GACGGCTTTCGATCAGTGCC 61.697 60.000 6.09 6.09 42.43 5.01
5281 7290 0.173481 TCCTGACGGCTTTCGATCAG 59.827 55.000 4.77 4.77 41.79 2.90
5302 7311 1.673033 CGGACTGCCTTCTTTCGATGT 60.673 52.381 0.00 0.00 0.00 3.06
5330 7339 2.494059 CCTTCCGACTGCTTTCTTTCA 58.506 47.619 0.00 0.00 0.00 2.69
5345 7354 1.340405 TGCCTTCTCTCAATGCCTTCC 60.340 52.381 0.00 0.00 0.00 3.46
5347 7356 1.353694 ACTGCCTTCTCTCAATGCCTT 59.646 47.619 0.00 0.00 0.00 4.35
5354 7363 1.554836 CTCCTGACTGCCTTCTCTCA 58.445 55.000 0.00 0.00 0.00 3.27
5533 7566 1.466950 GATTCCATCAACGCGGTTCAA 59.533 47.619 12.47 0.00 0.00 2.69
5773 7807 4.520111 TGCATTCAACAACATAGAGCACTT 59.480 37.500 0.00 0.00 0.00 3.16
5792 7829 2.027192 ACCTTCGTTACCAGATGTGCAT 60.027 45.455 0.00 0.00 0.00 3.96
5807 7844 0.038159 AGCTTCCAGTTCGACCTTCG 60.038 55.000 0.00 0.00 42.10 3.79
5842 7886 4.149598 AGGTAAATCTTTTGCCTCCGTTT 58.850 39.130 4.07 0.00 0.00 3.60
5857 7905 8.494433 TCTGCTTAATGAGTGGATAAGGTAAAT 58.506 33.333 0.00 0.00 0.00 1.40
5865 8110 6.609212 ACTCTCTTCTGCTTAATGAGTGGATA 59.391 38.462 0.00 0.00 32.90 2.59
5871 8116 4.332268 GGCAACTCTCTTCTGCTTAATGAG 59.668 45.833 0.00 0.00 36.32 2.90
5893 8138 7.599171 AGTCCGTTTTTCATTAATTAACCAGG 58.401 34.615 0.00 0.00 0.00 4.45
5906 8151 5.411977 TGTGACAGTTTTAGTCCGTTTTTCA 59.588 36.000 0.00 0.00 35.15 2.69
5937 8183 1.228657 GGTTTCTCGTGTGGCACTCC 61.229 60.000 19.83 8.43 31.34 3.85
6023 8286 0.685097 AGTCGCTTGCTGGGAGTTTA 59.315 50.000 0.00 0.00 37.96 2.01
6030 8350 1.507141 AAAACGGAGTCGCTTGCTGG 61.507 55.000 0.00 0.00 45.00 4.85
6031 8351 0.110644 GAAAACGGAGTCGCTTGCTG 60.111 55.000 0.00 0.00 45.00 4.41
6046 8366 2.984471 CGATGTTCCTCTTCGACGAAAA 59.016 45.455 12.03 0.00 43.37 2.29
6183 8506 7.059448 TCATTCTCTTTGTTTGTTTGTTTGC 57.941 32.000 0.00 0.00 0.00 3.68
6200 8527 5.534654 ACTCTAGCACTACCATCTCATTCTC 59.465 44.000 0.00 0.00 0.00 2.87
6219 8546 2.028112 ACTTCCATTCGCTTGCACTCTA 60.028 45.455 0.00 0.00 0.00 2.43
6266 8598 3.055385 ACCGGCTGCTCTACTTTATTCAA 60.055 43.478 0.00 0.00 0.00 2.69
6302 8635 0.686769 GTCTTTCTCGCCCCTCCCTA 60.687 60.000 0.00 0.00 0.00 3.53
6486 8825 3.066760 GGACAAAAGACTTGAACAGTGGG 59.933 47.826 0.00 0.00 35.01 4.61
6500 8847 3.308530 GCACGAAATTCCTGGACAAAAG 58.691 45.455 0.00 0.00 0.00 2.27
6536 8883 4.142609 TCTAAGCTATGCTCAACCCTTG 57.857 45.455 0.00 0.00 38.25 3.61
6572 8924 5.772393 ACACTGGTCTATTGGTTCCATAA 57.228 39.130 0.00 0.00 0.00 1.90
6574 8926 4.042809 TGAACACTGGTCTATTGGTTCCAT 59.957 41.667 0.00 0.00 35.09 3.41
6584 8937 4.764050 TGAAAGGTTGAACACTGGTCTA 57.236 40.909 0.00 0.00 0.00 2.59
6596 8949 7.678947 AGAACATCTCAAGTATGAAAGGTTG 57.321 36.000 0.00 0.00 34.49 3.77
6619 8972 2.275318 GAAAGCCTCTTGGTCGATGAG 58.725 52.381 0.00 0.00 35.27 2.90
6620 8973 1.404181 CGAAAGCCTCTTGGTCGATGA 60.404 52.381 0.00 0.00 33.01 2.92
6637 8990 2.093306 ATTGACGAAGCCATCACGAA 57.907 45.000 0.00 0.00 0.00 3.85
6638 8991 2.093306 AATTGACGAAGCCATCACGA 57.907 45.000 0.00 0.00 0.00 4.35
6639 8992 2.900122 AAATTGACGAAGCCATCACG 57.100 45.000 0.00 0.00 0.00 4.35
6640 8993 5.938322 TCTTAAAATTGACGAAGCCATCAC 58.062 37.500 0.00 0.00 0.00 3.06
6646 8999 6.855914 TCACAACATCTTAAAATTGACGAAGC 59.144 34.615 0.00 0.00 0.00 3.86
6656 9009 6.964370 CGACACAAGTTCACAACATCTTAAAA 59.036 34.615 0.00 0.00 0.00 1.52
6661 9014 3.531538 ACGACACAAGTTCACAACATCT 58.468 40.909 0.00 0.00 0.00 2.90
6671 9024 3.482436 AGAGAGAGAGACGACACAAGTT 58.518 45.455 0.00 0.00 0.00 2.66
6672 9025 3.071479 GAGAGAGAGAGACGACACAAGT 58.929 50.000 0.00 0.00 0.00 3.16
6673 9026 3.125146 CAGAGAGAGAGAGACGACACAAG 59.875 52.174 0.00 0.00 0.00 3.16
6674 9027 3.070748 CAGAGAGAGAGAGACGACACAA 58.929 50.000 0.00 0.00 0.00 3.33
6675 9028 2.694213 CAGAGAGAGAGAGACGACACA 58.306 52.381 0.00 0.00 0.00 3.72
6676 9029 1.396996 GCAGAGAGAGAGAGACGACAC 59.603 57.143 0.00 0.00 0.00 3.67
6677 9030 1.002544 TGCAGAGAGAGAGAGACGACA 59.997 52.381 0.00 0.00 0.00 4.35
6678 9031 1.665679 CTGCAGAGAGAGAGAGACGAC 59.334 57.143 8.42 0.00 0.00 4.34
6679 9032 1.406751 CCTGCAGAGAGAGAGAGACGA 60.407 57.143 17.39 0.00 0.00 4.20
6680 9033 1.016627 CCTGCAGAGAGAGAGAGACG 58.983 60.000 17.39 0.00 0.00 4.18
6681 9034 1.392589 CCCTGCAGAGAGAGAGAGAC 58.607 60.000 17.39 0.00 0.00 3.36
6682 9035 0.258484 CCCCTGCAGAGAGAGAGAGA 59.742 60.000 17.39 0.00 0.00 3.10
6683 9036 0.756442 CCCCCTGCAGAGAGAGAGAG 60.756 65.000 17.39 0.00 0.00 3.20
6684 9037 1.309347 CCCCCTGCAGAGAGAGAGA 59.691 63.158 17.39 0.00 0.00 3.10
6685 9038 2.433994 GCCCCCTGCAGAGAGAGAG 61.434 68.421 17.39 0.00 40.77 3.20
6686 9039 2.364842 GCCCCCTGCAGAGAGAGA 60.365 66.667 17.39 0.00 40.77 3.10
6687 9040 2.365370 AGCCCCCTGCAGAGAGAG 60.365 66.667 17.39 0.00 44.83 3.20
6688 9041 2.364842 GAGCCCCCTGCAGAGAGA 60.365 66.667 17.39 0.00 44.83 3.10
6689 9042 1.633915 ATTGAGCCCCCTGCAGAGAG 61.634 60.000 17.39 3.71 44.83 3.20
6690 9043 0.326522 TATTGAGCCCCCTGCAGAGA 60.327 55.000 17.39 0.00 44.83 3.10
6691 9044 0.769873 ATATTGAGCCCCCTGCAGAG 59.230 55.000 17.39 0.01 44.83 3.35
6692 9045 0.767375 GATATTGAGCCCCCTGCAGA 59.233 55.000 17.39 0.00 44.83 4.26
6693 9046 0.769873 AGATATTGAGCCCCCTGCAG 59.230 55.000 6.78 6.78 44.83 4.41
6694 9047 0.767375 GAGATATTGAGCCCCCTGCA 59.233 55.000 0.00 0.00 44.83 4.41
6695 9048 0.321122 CGAGATATTGAGCCCCCTGC 60.321 60.000 0.00 0.00 41.71 4.85
6696 9049 1.342074 TCGAGATATTGAGCCCCCTG 58.658 55.000 0.00 0.00 0.00 4.45
6697 9050 2.103153 TTCGAGATATTGAGCCCCCT 57.897 50.000 0.00 0.00 0.00 4.79
6698 9051 2.104963 ACTTTCGAGATATTGAGCCCCC 59.895 50.000 0.00 0.00 0.00 5.40
6699 9052 3.134458 CACTTTCGAGATATTGAGCCCC 58.866 50.000 0.00 0.00 0.00 5.80
6700 9053 2.545946 GCACTTTCGAGATATTGAGCCC 59.454 50.000 0.00 0.00 0.00 5.19
6701 9054 3.462021 AGCACTTTCGAGATATTGAGCC 58.538 45.455 0.00 0.00 0.00 4.70
6702 9055 4.115516 TGAGCACTTTCGAGATATTGAGC 58.884 43.478 0.00 0.00 0.00 4.26
6703 9056 6.585702 CCTATGAGCACTTTCGAGATATTGAG 59.414 42.308 0.00 0.00 0.00 3.02
6704 9057 6.265422 TCCTATGAGCACTTTCGAGATATTGA 59.735 38.462 0.00 0.00 0.00 2.57
6705 9058 6.450545 TCCTATGAGCACTTTCGAGATATTG 58.549 40.000 0.00 0.00 0.00 1.90
6706 9059 6.266558 ACTCCTATGAGCACTTTCGAGATATT 59.733 38.462 0.00 0.00 42.74 1.28
6707 9060 5.772672 ACTCCTATGAGCACTTTCGAGATAT 59.227 40.000 0.00 0.00 42.74 1.63
6708 9061 5.133941 ACTCCTATGAGCACTTTCGAGATA 58.866 41.667 0.00 0.00 42.74 1.98
6709 9062 3.957497 ACTCCTATGAGCACTTTCGAGAT 59.043 43.478 0.00 0.00 42.74 2.75
6710 9063 3.357203 ACTCCTATGAGCACTTTCGAGA 58.643 45.455 0.00 0.00 42.74 4.04
6711 9064 3.791973 ACTCCTATGAGCACTTTCGAG 57.208 47.619 0.00 0.00 42.74 4.04
6712 9065 4.524053 TCTACTCCTATGAGCACTTTCGA 58.476 43.478 0.00 0.00 42.74 3.71
6713 9066 4.336993 ACTCTACTCCTATGAGCACTTTCG 59.663 45.833 0.00 0.00 42.74 3.46
6714 9067 5.587289 CACTCTACTCCTATGAGCACTTTC 58.413 45.833 0.00 0.00 42.74 2.62
6715 9068 4.142049 GCACTCTACTCCTATGAGCACTTT 60.142 45.833 0.00 0.00 42.74 2.66
6716 9069 3.383185 GCACTCTACTCCTATGAGCACTT 59.617 47.826 0.00 0.00 42.74 3.16
6717 9070 2.955660 GCACTCTACTCCTATGAGCACT 59.044 50.000 0.00 0.00 42.74 4.40
6718 9071 2.690497 TGCACTCTACTCCTATGAGCAC 59.310 50.000 0.00 0.00 42.74 4.40
6719 9072 3.018423 TGCACTCTACTCCTATGAGCA 57.982 47.619 0.00 0.00 42.74 4.26
6720 9073 3.860378 GCATGCACTCTACTCCTATGAGC 60.860 52.174 14.21 0.00 42.74 4.26
6721 9074 3.611293 CGCATGCACTCTACTCCTATGAG 60.611 52.174 19.57 0.00 44.62 2.90
6722 9075 2.294512 CGCATGCACTCTACTCCTATGA 59.705 50.000 19.57 0.00 0.00 2.15
6723 9076 2.035193 ACGCATGCACTCTACTCCTATG 59.965 50.000 19.57 0.00 0.00 2.23
6724 9077 2.035193 CACGCATGCACTCTACTCCTAT 59.965 50.000 19.57 0.00 0.00 2.57
6725 9078 1.405463 CACGCATGCACTCTACTCCTA 59.595 52.381 19.57 0.00 0.00 2.94
6726 9079 0.174389 CACGCATGCACTCTACTCCT 59.826 55.000 19.57 0.00 0.00 3.69
6727 9080 2.670635 CACGCATGCACTCTACTCC 58.329 57.895 19.57 0.00 0.00 3.85
6738 9091 4.467084 ACCTACCCCGCACGCATG 62.467 66.667 0.00 0.00 0.00 4.06
6739 9092 4.157120 GACCTACCCCGCACGCAT 62.157 66.667 0.00 0.00 0.00 4.73
6740 9093 3.942377 TAGACCTACCCCGCACGCA 62.942 63.158 0.00 0.00 0.00 5.24
6741 9094 2.496291 ATAGACCTACCCCGCACGC 61.496 63.158 0.00 0.00 0.00 5.34
6742 9095 1.362717 CATAGACCTACCCCGCACG 59.637 63.158 0.00 0.00 0.00 5.34
6743 9096 0.104304 CACATAGACCTACCCCGCAC 59.896 60.000 0.00 0.00 0.00 5.34
6744 9097 1.682451 GCACATAGACCTACCCCGCA 61.682 60.000 0.00 0.00 0.00 5.69
6745 9098 1.069258 GCACATAGACCTACCCCGC 59.931 63.158 0.00 0.00 0.00 6.13
6746 9099 1.362717 CGCACATAGACCTACCCCG 59.637 63.158 0.00 0.00 0.00 5.73
6747 9100 0.104304 CACGCACATAGACCTACCCC 59.896 60.000 0.00 0.00 0.00 4.95
6748 9101 0.822164 ACACGCACATAGACCTACCC 59.178 55.000 0.00 0.00 0.00 3.69
6749 9102 4.612259 CGTATACACGCACATAGACCTACC 60.612 50.000 3.32 0.00 42.05 3.18
6750 9103 4.461405 CGTATACACGCACATAGACCTAC 58.539 47.826 3.32 0.00 42.05 3.18
6751 9104 4.737353 CGTATACACGCACATAGACCTA 57.263 45.455 3.32 0.00 42.05 3.08
6752 9105 3.620929 CGTATACACGCACATAGACCT 57.379 47.619 3.32 0.00 42.05 3.85
6762 9115 2.819888 CGCAGATGCTCGTATACACGC 61.820 57.143 3.32 5.14 40.58 5.34
6763 9116 1.045477 CGCAGATGCTCGTATACACG 58.955 55.000 3.32 0.00 41.45 4.49
6764 9117 2.401017 TCGCAGATGCTCGTATACAC 57.599 50.000 3.32 0.00 39.32 2.90
6765 9118 3.243401 ACAATCGCAGATGCTCGTATACA 60.243 43.478 3.32 0.00 45.12 2.29
6766 9119 3.309388 ACAATCGCAGATGCTCGTATAC 58.691 45.455 2.95 0.00 45.12 1.47
6767 9120 3.643159 ACAATCGCAGATGCTCGTATA 57.357 42.857 2.95 0.00 45.12 1.47
6768 9121 2.515926 ACAATCGCAGATGCTCGTAT 57.484 45.000 2.95 0.00 45.12 3.06
6769 9122 2.357952 AGTACAATCGCAGATGCTCGTA 59.642 45.455 2.95 0.00 45.12 3.43
6770 9123 1.135139 AGTACAATCGCAGATGCTCGT 59.865 47.619 2.95 0.00 45.12 4.18
6771 9124 1.845266 AGTACAATCGCAGATGCTCG 58.155 50.000 2.95 0.00 45.12 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.