Multiple sequence alignment - TraesCS5D01G107700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G107700 chr5D 100.000 3484 0 0 1 3484 121084206 121080723 0.000000e+00 6434.0
1 TraesCS5D01G107700 chr5D 98.424 2538 25 4 962 3484 77002163 77004700 0.000000e+00 4451.0
2 TraesCS5D01G107700 chr5D 98.301 2531 33 4 962 3483 61461561 61464090 0.000000e+00 4427.0
3 TraesCS5D01G107700 chr5D 89.724 399 24 14 449 839 61461027 61461416 8.690000e-136 494.0
4 TraesCS5D01G107700 chr5D 97.101 276 6 2 452 727 77001598 77001871 6.810000e-127 464.0
5 TraesCS5D01G107700 chr4D 98.657 2532 24 4 962 3484 365416535 365419065 0.000000e+00 4479.0
6 TraesCS5D01G107700 chr4D 94.477 344 13 6 452 794 365415927 365416265 3.080000e-145 525.0
7 TraesCS5D01G107700 chr4D 97.834 277 4 2 451 727 493748787 493748513 8.750000e-131 477.0
8 TraesCS5D01G107700 chr4D 100.000 37 0 0 909 945 365416367 365416403 6.240000e-08 69.4
9 TraesCS5D01G107700 chr3D 97.763 2593 46 8 900 3483 47790413 47793002 0.000000e+00 4457.0
10 TraesCS5D01G107700 chr3D 96.763 278 7 2 450 727 47789879 47790154 2.450000e-126 462.0
11 TraesCS5D01G107700 chr3D 97.500 40 1 0 793 832 132864263 132864302 6.240000e-08 69.4
12 TraesCS5D01G107700 chr1D 98.452 2519 28 4 976 3483 11241125 11238607 0.000000e+00 4425.0
13 TraesCS5D01G107700 chr1D 97.817 2565 32 13 937 3484 196484173 196481616 0.000000e+00 4405.0
14 TraesCS5D01G107700 chr1D 94.649 299 11 5 453 750 196484586 196484292 3.170000e-125 459.0
15 TraesCS5D01G107700 chr1D 97.500 40 1 0 793 832 85930171 85930210 6.240000e-08 69.4
16 TraesCS5D01G107700 chr7D 98.145 2534 36 4 962 3484 316382208 316384741 0.000000e+00 4409.0
17 TraesCS5D01G107700 chr7D 98.881 268 3 0 452 719 316381643 316381910 2.430000e-131 479.0
18 TraesCS5D01G107700 chr7D 94.810 289 10 5 453 740 608434140 608434424 2.470000e-121 446.0
19 TraesCS5D01G107700 chr2D 97.774 2561 44 6 937 3484 405625409 405622849 0.000000e+00 4401.0
20 TraesCS5D01G107700 chr2D 96.727 275 7 2 453 727 416392353 416392625 1.140000e-124 457.0
21 TraesCS5D01G107700 chrUn 98.025 2532 41 5 960 3484 112243685 112246214 0.000000e+00 4390.0
22 TraesCS5D01G107700 chr5B 98.451 452 7 0 1 452 134131127 134130676 0.000000e+00 797.0
23 TraesCS5D01G107700 chr5A 97.143 455 12 1 1 455 132097707 132097254 0.000000e+00 767.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G107700 chr5D 121080723 121084206 3483 True 6434.000000 6434 100.000000 1 3484 1 chr5D.!!$R1 3483
1 TraesCS5D01G107700 chr5D 61461027 61464090 3063 False 2460.500000 4427 94.012500 449 3483 2 chr5D.!!$F1 3034
2 TraesCS5D01G107700 chr5D 77001598 77004700 3102 False 2457.500000 4451 97.762500 452 3484 2 chr5D.!!$F2 3032
3 TraesCS5D01G107700 chr4D 365415927 365419065 3138 False 1691.133333 4479 97.711333 452 3484 3 chr4D.!!$F1 3032
4 TraesCS5D01G107700 chr3D 47789879 47793002 3123 False 2459.500000 4457 97.263000 450 3483 2 chr3D.!!$F2 3033
5 TraesCS5D01G107700 chr1D 11238607 11241125 2518 True 4425.000000 4425 98.452000 976 3483 1 chr1D.!!$R1 2507
6 TraesCS5D01G107700 chr1D 196481616 196484586 2970 True 2432.000000 4405 96.233000 453 3484 2 chr1D.!!$R2 3031
7 TraesCS5D01G107700 chr7D 316381643 316384741 3098 False 2444.000000 4409 98.513000 452 3484 2 chr7D.!!$F2 3032
8 TraesCS5D01G107700 chr2D 405622849 405625409 2560 True 4401.000000 4401 97.774000 937 3484 1 chr2D.!!$R1 2547
9 TraesCS5D01G107700 chrUn 112243685 112246214 2529 False 4390.000000 4390 98.025000 960 3484 1 chrUn.!!$F1 2524

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
294 295 0.035056 CTCCCGCTGGAACTGGAAAT 60.035 55.0 0.00 0.0 41.17 2.17 F
295 296 0.035439 TCCCGCTGGAACTGGAAATC 60.035 55.0 0.00 0.0 37.86 2.17 F
720 723 0.179089 CGAAGGCCTCCTCATCACAG 60.179 60.0 5.23 0.0 30.89 3.66 F
721 724 0.463474 GAAGGCCTCCTCATCACAGC 60.463 60.0 5.23 0.0 30.89 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1638 1952 0.832030 CGTAGACGCGATGAAACTCG 59.168 55.000 15.93 2.51 41.54 4.18 R
1797 2111 2.202810 GTAGCGAGCACAGAGGGC 60.203 66.667 0.00 0.00 0.00 5.19 R
2330 2653 2.743664 CGAGGAACATGAGCAACATCAA 59.256 45.455 0.00 0.00 37.07 2.57 R
3168 3491 3.432749 GCTGAAGGTTGATGAGATAGGCA 60.433 47.826 0.00 0.00 0.00 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.031235 TACCATTGCCATGATTGCGG 58.969 50.000 0.00 0.00 31.07 5.69
26 27 3.411808 CCATGATTGCGGCATATGC 57.588 52.632 19.79 19.79 41.14 3.14
27 28 0.599060 CCATGATTGCGGCATATGCA 59.401 50.000 28.07 8.98 44.36 3.96
28 29 1.402325 CCATGATTGCGGCATATGCAG 60.402 52.381 28.07 24.87 44.28 4.41
29 30 0.885879 ATGATTGCGGCATATGCAGG 59.114 50.000 28.07 19.66 44.28 4.85
30 31 0.466007 TGATTGCGGCATATGCAGGT 60.466 50.000 28.07 9.68 44.28 4.00
31 32 0.039798 GATTGCGGCATATGCAGGTG 60.040 55.000 28.07 15.45 44.28 4.00
32 33 0.466007 ATTGCGGCATATGCAGGTGA 60.466 50.000 28.07 10.70 44.28 4.02
33 34 1.096967 TTGCGGCATATGCAGGTGAG 61.097 55.000 28.07 12.71 44.28 3.51
34 35 2.901292 GCGGCATATGCAGGTGAGC 61.901 63.158 28.07 17.82 44.36 4.26
35 36 1.227764 CGGCATATGCAGGTGAGCT 60.228 57.895 28.07 0.00 44.36 4.09
36 37 1.226686 CGGCATATGCAGGTGAGCTC 61.227 60.000 28.07 6.82 44.36 4.09
37 38 0.108207 GGCATATGCAGGTGAGCTCT 59.892 55.000 28.07 0.00 44.36 4.09
38 39 1.345741 GGCATATGCAGGTGAGCTCTA 59.654 52.381 28.07 0.00 44.36 2.43
39 40 2.224378 GGCATATGCAGGTGAGCTCTAA 60.224 50.000 28.07 0.00 44.36 2.10
40 41 3.470709 GCATATGCAGGTGAGCTCTAAA 58.529 45.455 22.84 0.00 41.59 1.85
41 42 3.249559 GCATATGCAGGTGAGCTCTAAAC 59.750 47.826 22.84 4.59 41.59 2.01
42 43 4.445453 CATATGCAGGTGAGCTCTAAACA 58.555 43.478 16.19 7.34 34.99 2.83
43 44 2.169832 TGCAGGTGAGCTCTAAACAC 57.830 50.000 16.19 4.50 34.99 3.32
44 45 1.694150 TGCAGGTGAGCTCTAAACACT 59.306 47.619 16.19 2.03 35.28 3.55
45 46 2.897326 TGCAGGTGAGCTCTAAACACTA 59.103 45.455 16.19 0.00 35.28 2.74
46 47 3.515502 TGCAGGTGAGCTCTAAACACTAT 59.484 43.478 16.19 0.00 35.28 2.12
47 48 4.116238 GCAGGTGAGCTCTAAACACTATC 58.884 47.826 16.19 0.00 35.28 2.08
48 49 4.142049 GCAGGTGAGCTCTAAACACTATCT 60.142 45.833 16.19 0.00 35.28 1.98
49 50 5.625656 GCAGGTGAGCTCTAAACACTATCTT 60.626 44.000 16.19 0.00 35.28 2.40
50 51 6.039616 CAGGTGAGCTCTAAACACTATCTTC 58.960 44.000 16.19 0.00 35.28 2.87
51 52 5.717178 AGGTGAGCTCTAAACACTATCTTCA 59.283 40.000 16.19 0.00 35.28 3.02
52 53 5.808030 GGTGAGCTCTAAACACTATCTTCAC 59.192 44.000 16.19 0.00 35.28 3.18
53 54 6.350612 GGTGAGCTCTAAACACTATCTTCACT 60.351 42.308 16.19 0.00 35.28 3.41
54 55 7.093992 GTGAGCTCTAAACACTATCTTCACTT 58.906 38.462 16.19 0.00 0.00 3.16
55 56 7.062839 GTGAGCTCTAAACACTATCTTCACTTG 59.937 40.741 16.19 0.00 0.00 3.16
56 57 6.998802 AGCTCTAAACACTATCTTCACTTGT 58.001 36.000 0.00 0.00 0.00 3.16
57 58 8.123639 AGCTCTAAACACTATCTTCACTTGTA 57.876 34.615 0.00 0.00 0.00 2.41
58 59 8.754080 AGCTCTAAACACTATCTTCACTTGTAT 58.246 33.333 0.00 0.00 0.00 2.29
59 60 9.026074 GCTCTAAACACTATCTTCACTTGTATC 57.974 37.037 0.00 0.00 0.00 2.24
68 69 9.757227 ACTATCTTCACTTGTATCTTATCAAGC 57.243 33.333 5.06 0.00 43.05 4.01
69 70 9.755804 CTATCTTCACTTGTATCTTATCAAGCA 57.244 33.333 5.06 0.00 43.05 3.91
71 72 8.846943 TCTTCACTTGTATCTTATCAAGCAAA 57.153 30.769 5.06 0.54 43.05 3.68
72 73 8.939929 TCTTCACTTGTATCTTATCAAGCAAAG 58.060 33.333 5.06 8.40 43.05 2.77
73 74 8.621532 TTCACTTGTATCTTATCAAGCAAAGT 57.378 30.769 5.06 0.00 43.05 2.66
74 75 8.256611 TCACTTGTATCTTATCAAGCAAAGTC 57.743 34.615 5.06 0.00 43.05 3.01
75 76 8.097038 TCACTTGTATCTTATCAAGCAAAGTCT 58.903 33.333 5.06 0.00 43.05 3.24
76 77 8.725148 CACTTGTATCTTATCAAGCAAAGTCTT 58.275 33.333 5.06 0.00 43.05 3.01
77 78 9.944376 ACTTGTATCTTATCAAGCAAAGTCTTA 57.056 29.630 5.06 0.00 43.05 2.10
80 81 9.162764 TGTATCTTATCAAGCAAAGTCTTAACC 57.837 33.333 0.00 0.00 0.00 2.85
81 82 7.631717 ATCTTATCAAGCAAAGTCTTAACCC 57.368 36.000 0.00 0.00 0.00 4.11
82 83 6.779860 TCTTATCAAGCAAAGTCTTAACCCT 58.220 36.000 0.00 0.00 0.00 4.34
83 84 6.655003 TCTTATCAAGCAAAGTCTTAACCCTG 59.345 38.462 0.00 0.00 0.00 4.45
84 85 4.164843 TCAAGCAAAGTCTTAACCCTGT 57.835 40.909 0.00 0.00 0.00 4.00
85 86 4.532834 TCAAGCAAAGTCTTAACCCTGTT 58.467 39.130 0.00 0.00 0.00 3.16
86 87 4.953579 TCAAGCAAAGTCTTAACCCTGTTT 59.046 37.500 0.00 0.00 0.00 2.83
87 88 5.067283 TCAAGCAAAGTCTTAACCCTGTTTC 59.933 40.000 0.00 0.00 0.00 2.78
88 89 4.793201 AGCAAAGTCTTAACCCTGTTTCT 58.207 39.130 0.00 0.00 0.00 2.52
89 90 5.937111 AGCAAAGTCTTAACCCTGTTTCTA 58.063 37.500 0.00 0.00 0.00 2.10
90 91 6.543735 AGCAAAGTCTTAACCCTGTTTCTAT 58.456 36.000 0.00 0.00 0.00 1.98
91 92 7.004691 AGCAAAGTCTTAACCCTGTTTCTATT 58.995 34.615 0.00 0.00 0.00 1.73
92 93 7.175119 AGCAAAGTCTTAACCCTGTTTCTATTC 59.825 37.037 0.00 0.00 0.00 1.75
93 94 7.040686 GCAAAGTCTTAACCCTGTTTCTATTCA 60.041 37.037 0.00 0.00 0.00 2.57
94 95 8.846211 CAAAGTCTTAACCCTGTTTCTATTCAA 58.154 33.333 0.00 0.00 0.00 2.69
95 96 8.990163 AAGTCTTAACCCTGTTTCTATTCAAA 57.010 30.769 0.00 0.00 0.00 2.69
96 97 9.588096 AAGTCTTAACCCTGTTTCTATTCAAAT 57.412 29.630 0.00 0.00 0.00 2.32
97 98 9.232473 AGTCTTAACCCTGTTTCTATTCAAATC 57.768 33.333 0.00 0.00 0.00 2.17
98 99 9.010029 GTCTTAACCCTGTTTCTATTCAAATCA 57.990 33.333 0.00 0.00 0.00 2.57
99 100 9.581289 TCTTAACCCTGTTTCTATTCAAATCAA 57.419 29.630 0.00 0.00 0.00 2.57
100 101 9.626045 CTTAACCCTGTTTCTATTCAAATCAAC 57.374 33.333 0.00 0.00 0.00 3.18
101 102 6.590234 ACCCTGTTTCTATTCAAATCAACC 57.410 37.500 0.00 0.00 0.00 3.77
102 103 6.074648 ACCCTGTTTCTATTCAAATCAACCA 58.925 36.000 0.00 0.00 0.00 3.67
103 104 6.209391 ACCCTGTTTCTATTCAAATCAACCAG 59.791 38.462 0.00 0.00 0.00 4.00
104 105 6.350445 CCCTGTTTCTATTCAAATCAACCAGG 60.350 42.308 0.00 0.00 0.00 4.45
105 106 6.350445 CCTGTTTCTATTCAAATCAACCAGGG 60.350 42.308 0.00 0.00 0.00 4.45
106 107 6.074648 TGTTTCTATTCAAATCAACCAGGGT 58.925 36.000 0.00 0.00 0.00 4.34
107 108 6.553100 TGTTTCTATTCAAATCAACCAGGGTT 59.447 34.615 0.00 0.00 39.13 4.11
118 119 4.659172 CAGGGTTGGCGGCAAGGA 62.659 66.667 26.22 0.00 0.00 3.36
119 120 3.897122 AGGGTTGGCGGCAAGGAA 61.897 61.111 26.22 0.00 0.00 3.36
120 121 2.915137 GGGTTGGCGGCAAGGAAA 60.915 61.111 26.22 0.00 0.00 3.13
121 122 2.503382 GGGTTGGCGGCAAGGAAAA 61.503 57.895 26.22 0.00 0.00 2.29
122 123 1.300620 GGTTGGCGGCAAGGAAAAC 60.301 57.895 26.22 12.79 0.00 2.43
123 124 1.739667 GTTGGCGGCAAGGAAAACT 59.260 52.632 26.22 0.00 0.00 2.66
124 125 0.955905 GTTGGCGGCAAGGAAAACTA 59.044 50.000 26.22 0.00 0.00 2.24
125 126 0.955905 TTGGCGGCAAGGAAAACTAC 59.044 50.000 21.79 0.00 0.00 2.73
126 127 0.109723 TGGCGGCAAGGAAAACTACT 59.890 50.000 10.22 0.00 0.00 2.57
127 128 1.244816 GGCGGCAAGGAAAACTACTT 58.755 50.000 3.07 0.00 0.00 2.24
128 129 1.199327 GGCGGCAAGGAAAACTACTTC 59.801 52.381 3.07 0.00 0.00 3.01
129 130 1.199327 GCGGCAAGGAAAACTACTTCC 59.801 52.381 0.00 0.00 44.61 3.46
130 131 2.500229 CGGCAAGGAAAACTACTTCCA 58.500 47.619 5.24 0.00 46.38 3.53
131 132 2.225727 CGGCAAGGAAAACTACTTCCAC 59.774 50.000 5.24 0.00 46.38 4.02
132 133 3.487372 GGCAAGGAAAACTACTTCCACT 58.513 45.455 5.24 0.00 46.38 4.00
133 134 3.253432 GGCAAGGAAAACTACTTCCACTG 59.747 47.826 5.24 3.37 46.38 3.66
134 135 3.883489 GCAAGGAAAACTACTTCCACTGT 59.117 43.478 5.24 0.00 46.38 3.55
135 136 4.261197 GCAAGGAAAACTACTTCCACTGTG 60.261 45.833 0.00 0.00 46.38 3.66
136 137 3.477530 AGGAAAACTACTTCCACTGTGC 58.522 45.455 1.29 0.00 46.38 4.57
137 138 3.118038 AGGAAAACTACTTCCACTGTGCA 60.118 43.478 1.29 0.00 46.38 4.57
138 139 3.630312 GGAAAACTACTTCCACTGTGCAA 59.370 43.478 1.29 0.00 43.84 4.08
139 140 4.097286 GGAAAACTACTTCCACTGTGCAAA 59.903 41.667 1.29 0.00 43.84 3.68
140 141 4.900635 AAACTACTTCCACTGTGCAAAG 57.099 40.909 1.09 1.09 0.00 2.77
141 142 3.560636 ACTACTTCCACTGTGCAAAGT 57.439 42.857 22.10 22.10 36.09 2.66
142 143 3.206150 ACTACTTCCACTGTGCAAAGTG 58.794 45.455 27.39 27.39 45.93 3.16
143 144 2.128771 ACTTCCACTGTGCAAAGTGT 57.871 45.000 30.56 13.37 45.08 3.55
144 145 1.745087 ACTTCCACTGTGCAAAGTGTG 59.255 47.619 30.56 22.63 45.08 3.82
146 147 2.492418 CCACTGTGCAAAGTGTGGT 58.508 52.632 30.56 0.00 45.08 4.16
147 148 1.674359 CCACTGTGCAAAGTGTGGTA 58.326 50.000 30.56 0.00 45.08 3.25
148 149 2.229792 CCACTGTGCAAAGTGTGGTAT 58.770 47.619 30.56 0.00 45.08 2.73
149 150 2.030893 CCACTGTGCAAAGTGTGGTATG 60.031 50.000 30.56 13.97 45.08 2.39
150 151 1.608590 ACTGTGCAAAGTGTGGTATGC 59.391 47.619 9.29 0.00 39.22 3.14
151 152 1.881973 CTGTGCAAAGTGTGGTATGCT 59.118 47.619 0.00 0.00 39.49 3.79
152 153 3.073678 CTGTGCAAAGTGTGGTATGCTA 58.926 45.455 0.00 0.00 39.49 3.49
153 154 3.684908 TGTGCAAAGTGTGGTATGCTAT 58.315 40.909 0.00 0.00 39.49 2.97
154 155 4.837972 TGTGCAAAGTGTGGTATGCTATA 58.162 39.130 0.00 0.00 39.49 1.31
155 156 5.249420 TGTGCAAAGTGTGGTATGCTATAA 58.751 37.500 0.00 0.00 39.49 0.98
156 157 5.885352 TGTGCAAAGTGTGGTATGCTATAAT 59.115 36.000 0.00 0.00 39.49 1.28
157 158 6.038161 TGTGCAAAGTGTGGTATGCTATAATC 59.962 38.462 0.00 0.00 39.49 1.75
158 159 6.038161 GTGCAAAGTGTGGTATGCTATAATCA 59.962 38.462 0.00 0.00 39.49 2.57
159 160 6.772233 TGCAAAGTGTGGTATGCTATAATCAT 59.228 34.615 0.00 0.00 39.49 2.45
160 161 7.080099 GCAAAGTGTGGTATGCTATAATCATG 58.920 38.462 0.00 0.00 35.93 3.07
161 162 6.808008 AAGTGTGGTATGCTATAATCATGC 57.192 37.500 0.00 0.00 0.00 4.06
162 163 6.119240 AGTGTGGTATGCTATAATCATGCT 57.881 37.500 0.00 0.00 0.00 3.79
163 164 5.936372 AGTGTGGTATGCTATAATCATGCTG 59.064 40.000 0.00 0.00 0.00 4.41
164 165 5.122869 GTGTGGTATGCTATAATCATGCTGG 59.877 44.000 0.00 0.00 0.00 4.85
165 166 4.095483 GTGGTATGCTATAATCATGCTGGC 59.905 45.833 0.00 0.00 0.00 4.85
166 167 4.019051 TGGTATGCTATAATCATGCTGGCT 60.019 41.667 0.00 0.00 0.00 4.75
167 168 4.946157 GGTATGCTATAATCATGCTGGCTT 59.054 41.667 0.00 0.00 0.00 4.35
168 169 5.416952 GGTATGCTATAATCATGCTGGCTTT 59.583 40.000 0.00 0.00 0.00 3.51
169 170 4.841443 TGCTATAATCATGCTGGCTTTG 57.159 40.909 0.00 0.00 0.00 2.77
170 171 4.209538 TGCTATAATCATGCTGGCTTTGT 58.790 39.130 0.00 0.00 0.00 2.83
171 172 4.037089 TGCTATAATCATGCTGGCTTTGTG 59.963 41.667 0.00 0.00 0.00 3.33
172 173 4.037208 GCTATAATCATGCTGGCTTTGTGT 59.963 41.667 0.00 0.00 0.00 3.72
173 174 5.450965 GCTATAATCATGCTGGCTTTGTGTT 60.451 40.000 0.00 0.00 0.00 3.32
174 175 6.238731 GCTATAATCATGCTGGCTTTGTGTTA 60.239 38.462 0.00 0.00 0.00 2.41
175 176 4.870123 AATCATGCTGGCTTTGTGTTAA 57.130 36.364 0.00 0.00 0.00 2.01
176 177 3.641437 TCATGCTGGCTTTGTGTTAAC 57.359 42.857 0.00 0.00 0.00 2.01
177 178 3.221771 TCATGCTGGCTTTGTGTTAACT 58.778 40.909 7.22 0.00 0.00 2.24
178 179 3.004629 TCATGCTGGCTTTGTGTTAACTG 59.995 43.478 7.22 0.00 0.00 3.16
179 180 2.374184 TGCTGGCTTTGTGTTAACTGT 58.626 42.857 7.22 0.00 0.00 3.55
180 181 2.757868 TGCTGGCTTTGTGTTAACTGTT 59.242 40.909 7.22 0.00 0.00 3.16
181 182 3.115554 GCTGGCTTTGTGTTAACTGTTG 58.884 45.455 7.22 0.00 0.00 3.33
182 183 3.428862 GCTGGCTTTGTGTTAACTGTTGT 60.429 43.478 7.22 0.00 0.00 3.32
183 184 4.743493 CTGGCTTTGTGTTAACTGTTGTT 58.257 39.130 7.22 0.00 39.98 2.83
184 185 4.739195 TGGCTTTGTGTTAACTGTTGTTC 58.261 39.130 7.22 0.00 37.59 3.18
185 186 4.109766 GGCTTTGTGTTAACTGTTGTTCC 58.890 43.478 7.22 0.00 37.59 3.62
186 187 4.381079 GGCTTTGTGTTAACTGTTGTTCCA 60.381 41.667 7.22 0.00 37.59 3.53
187 188 4.798387 GCTTTGTGTTAACTGTTGTTCCAG 59.202 41.667 7.22 0.00 37.59 3.86
188 189 5.392595 GCTTTGTGTTAACTGTTGTTCCAGA 60.393 40.000 7.22 0.00 37.59 3.86
189 190 5.554822 TTGTGTTAACTGTTGTTCCAGAC 57.445 39.130 7.22 0.00 37.59 3.51
190 191 4.839121 TGTGTTAACTGTTGTTCCAGACT 58.161 39.130 7.22 0.00 37.59 3.24
191 192 4.873827 TGTGTTAACTGTTGTTCCAGACTC 59.126 41.667 7.22 0.00 37.59 3.36
192 193 4.873827 GTGTTAACTGTTGTTCCAGACTCA 59.126 41.667 7.22 0.00 37.59 3.41
193 194 5.527582 GTGTTAACTGTTGTTCCAGACTCAT 59.472 40.000 7.22 0.00 37.59 2.90
194 195 5.527214 TGTTAACTGTTGTTCCAGACTCATG 59.473 40.000 7.22 0.00 37.59 3.07
195 196 4.422073 AACTGTTGTTCCAGACTCATGA 57.578 40.909 0.00 0.00 36.30 3.07
196 197 3.733337 ACTGTTGTTCCAGACTCATGAC 58.267 45.455 0.00 0.00 36.30 3.06
197 198 3.134623 ACTGTTGTTCCAGACTCATGACA 59.865 43.478 0.00 0.00 36.30 3.58
198 199 3.732212 TGTTGTTCCAGACTCATGACAG 58.268 45.455 0.00 0.00 0.00 3.51
199 200 3.134623 TGTTGTTCCAGACTCATGACAGT 59.865 43.478 0.00 0.00 0.00 3.55
200 201 3.391506 TGTTCCAGACTCATGACAGTG 57.608 47.619 0.00 0.00 0.00 3.66
201 202 2.072298 GTTCCAGACTCATGACAGTGC 58.928 52.381 0.00 0.00 0.00 4.40
202 203 0.610174 TCCAGACTCATGACAGTGCC 59.390 55.000 0.00 0.00 0.00 5.01
203 204 0.322648 CCAGACTCATGACAGTGCCA 59.677 55.000 0.00 0.00 0.00 4.92
204 205 1.065636 CCAGACTCATGACAGTGCCAT 60.066 52.381 0.00 0.00 0.00 4.40
205 206 2.007608 CAGACTCATGACAGTGCCATG 58.992 52.381 12.81 12.81 41.93 3.66
206 207 1.904537 AGACTCATGACAGTGCCATGA 59.095 47.619 19.43 19.43 45.58 3.07
207 208 2.504585 AGACTCATGACAGTGCCATGAT 59.495 45.455 20.62 11.92 46.26 2.45
208 209 3.054582 AGACTCATGACAGTGCCATGATT 60.055 43.478 20.62 15.91 46.26 2.57
209 210 3.014623 ACTCATGACAGTGCCATGATTG 58.985 45.455 20.62 13.32 46.26 2.67
210 211 3.275999 CTCATGACAGTGCCATGATTGA 58.724 45.455 20.62 1.75 46.26 2.57
211 212 3.883489 CTCATGACAGTGCCATGATTGAT 59.117 43.478 20.62 0.00 46.26 2.57
212 213 4.274978 TCATGACAGTGCCATGATTGATT 58.725 39.130 17.12 0.00 43.67 2.57
213 214 4.707934 TCATGACAGTGCCATGATTGATTT 59.292 37.500 17.12 0.00 43.67 2.17
214 215 4.443913 TGACAGTGCCATGATTGATTTG 57.556 40.909 0.00 0.00 0.00 2.32
215 216 3.827876 TGACAGTGCCATGATTGATTTGT 59.172 39.130 0.00 0.00 0.00 2.83
216 217 4.171005 GACAGTGCCATGATTGATTTGTG 58.829 43.478 0.00 0.00 0.00 3.33
217 218 2.927477 CAGTGCCATGATTGATTTGTGC 59.073 45.455 0.00 0.00 0.00 4.57
218 219 2.093869 AGTGCCATGATTGATTTGTGCC 60.094 45.455 0.00 0.00 0.00 5.01
219 220 2.093869 GTGCCATGATTGATTTGTGCCT 60.094 45.455 0.00 0.00 0.00 4.75
220 221 2.568062 TGCCATGATTGATTTGTGCCTT 59.432 40.909 0.00 0.00 0.00 4.35
221 222 3.008157 TGCCATGATTGATTTGTGCCTTT 59.992 39.130 0.00 0.00 0.00 3.11
222 223 3.372822 GCCATGATTGATTTGTGCCTTTG 59.627 43.478 0.00 0.00 0.00 2.77
223 224 4.823157 CCATGATTGATTTGTGCCTTTGA 58.177 39.130 0.00 0.00 0.00 2.69
224 225 4.868171 CCATGATTGATTTGTGCCTTTGAG 59.132 41.667 0.00 0.00 0.00 3.02
225 226 5.475719 CATGATTGATTTGTGCCTTTGAGT 58.524 37.500 0.00 0.00 0.00 3.41
226 227 6.350361 CCATGATTGATTTGTGCCTTTGAGTA 60.350 38.462 0.00 0.00 0.00 2.59
227 228 6.647334 TGATTGATTTGTGCCTTTGAGTAA 57.353 33.333 0.00 0.00 0.00 2.24
228 229 7.230849 TGATTGATTTGTGCCTTTGAGTAAT 57.769 32.000 0.00 0.00 0.00 1.89
229 230 7.315142 TGATTGATTTGTGCCTTTGAGTAATC 58.685 34.615 0.00 0.00 0.00 1.75
230 231 6.899393 TTGATTTGTGCCTTTGAGTAATCT 57.101 33.333 0.00 0.00 0.00 2.40
231 232 6.258230 TGATTTGTGCCTTTGAGTAATCTG 57.742 37.500 0.00 0.00 0.00 2.90
232 233 4.503741 TTTGTGCCTTTGAGTAATCTGC 57.496 40.909 0.00 0.00 0.00 4.26
233 234 3.138884 TGTGCCTTTGAGTAATCTGCA 57.861 42.857 0.00 0.00 0.00 4.41
234 235 3.689347 TGTGCCTTTGAGTAATCTGCAT 58.311 40.909 0.00 0.00 0.00 3.96
235 236 3.441222 TGTGCCTTTGAGTAATCTGCATG 59.559 43.478 0.00 0.00 0.00 4.06
236 237 3.691118 GTGCCTTTGAGTAATCTGCATGA 59.309 43.478 0.00 0.00 0.00 3.07
237 238 4.337555 GTGCCTTTGAGTAATCTGCATGAT 59.662 41.667 0.00 0.00 36.89 2.45
238 239 4.337274 TGCCTTTGAGTAATCTGCATGATG 59.663 41.667 0.00 0.00 35.21 3.07
239 240 4.792057 GCCTTTGAGTAATCTGCATGATGC 60.792 45.833 11.12 11.12 45.29 3.91
263 264 7.985476 GCAGTAGCATAAATACTTTTTCCTGA 58.015 34.615 0.00 0.00 41.58 3.86
264 265 8.458843 GCAGTAGCATAAATACTTTTTCCTGAA 58.541 33.333 0.00 0.00 41.58 3.02
272 273 9.908152 ATAAATACTTTTTCCTGAAACTTTCCG 57.092 29.630 0.00 0.00 0.00 4.30
273 274 6.954487 ATACTTTTTCCTGAAACTTTCCGT 57.046 33.333 0.00 0.00 0.00 4.69
274 275 5.654603 ACTTTTTCCTGAAACTTTCCGTT 57.345 34.783 0.00 0.00 37.47 4.44
275 276 5.647589 ACTTTTTCCTGAAACTTTCCGTTC 58.352 37.500 0.00 0.00 33.90 3.95
276 277 5.417894 ACTTTTTCCTGAAACTTTCCGTTCT 59.582 36.000 0.00 0.00 33.90 3.01
277 278 5.494632 TTTTCCTGAAACTTTCCGTTCTC 57.505 39.130 0.00 0.00 33.90 2.87
278 279 3.121738 TCCTGAAACTTTCCGTTCTCC 57.878 47.619 0.00 0.00 33.90 3.71
279 280 2.152016 CCTGAAACTTTCCGTTCTCCC 58.848 52.381 0.00 0.00 33.90 4.30
280 281 1.798813 CTGAAACTTTCCGTTCTCCCG 59.201 52.381 0.00 0.00 33.90 5.14
281 282 0.516001 GAAACTTTCCGTTCTCCCGC 59.484 55.000 0.00 0.00 33.90 6.13
282 283 0.108019 AAACTTTCCGTTCTCCCGCT 59.892 50.000 0.00 0.00 33.90 5.52
283 284 0.602905 AACTTTCCGTTCTCCCGCTG 60.603 55.000 0.00 0.00 0.00 5.18
284 285 1.741770 CTTTCCGTTCTCCCGCTGG 60.742 63.158 0.00 0.00 0.00 4.85
285 286 2.167398 CTTTCCGTTCTCCCGCTGGA 62.167 60.000 0.00 0.00 38.75 3.86
286 287 1.760479 TTTCCGTTCTCCCGCTGGAA 61.760 55.000 0.00 0.00 41.17 3.53
287 288 2.434359 CCGTTCTCCCGCTGGAAC 60.434 66.667 0.00 0.00 41.17 3.62
288 289 2.657237 CGTTCTCCCGCTGGAACT 59.343 61.111 0.00 0.00 41.17 3.01
289 290 1.738099 CGTTCTCCCGCTGGAACTG 60.738 63.158 0.00 0.00 41.17 3.16
290 291 1.376037 GTTCTCCCGCTGGAACTGG 60.376 63.158 0.00 0.00 41.17 4.00
291 292 1.535444 TTCTCCCGCTGGAACTGGA 60.535 57.895 0.00 0.00 41.17 3.86
292 293 1.125093 TTCTCCCGCTGGAACTGGAA 61.125 55.000 0.00 0.00 41.17 3.53
293 294 1.125093 TCTCCCGCTGGAACTGGAAA 61.125 55.000 0.00 0.00 41.17 3.13
294 295 0.035056 CTCCCGCTGGAACTGGAAAT 60.035 55.000 0.00 0.00 41.17 2.17
295 296 0.035439 TCCCGCTGGAACTGGAAATC 60.035 55.000 0.00 0.00 37.86 2.17
296 297 0.322456 CCCGCTGGAACTGGAAATCA 60.322 55.000 0.00 0.00 0.00 2.57
297 298 1.533625 CCGCTGGAACTGGAAATCAA 58.466 50.000 0.00 0.00 0.00 2.57
298 299 1.200020 CCGCTGGAACTGGAAATCAAC 59.800 52.381 0.00 0.00 0.00 3.18
299 300 2.154462 CGCTGGAACTGGAAATCAACT 58.846 47.619 0.00 0.00 0.00 3.16
300 301 2.554032 CGCTGGAACTGGAAATCAACTT 59.446 45.455 0.00 0.00 0.00 2.66
301 302 3.610114 CGCTGGAACTGGAAATCAACTTG 60.610 47.826 0.00 0.00 0.00 3.16
302 303 3.319122 GCTGGAACTGGAAATCAACTTGT 59.681 43.478 0.00 0.00 0.00 3.16
303 304 4.794003 GCTGGAACTGGAAATCAACTTGTG 60.794 45.833 0.00 0.00 0.00 3.33
304 305 4.277476 TGGAACTGGAAATCAACTTGTGT 58.723 39.130 0.00 0.00 0.00 3.72
305 306 4.709397 TGGAACTGGAAATCAACTTGTGTT 59.291 37.500 0.00 0.00 36.75 3.32
306 307 5.163561 TGGAACTGGAAATCAACTTGTGTTC 60.164 40.000 0.00 0.00 33.52 3.18
307 308 5.067805 GGAACTGGAAATCAACTTGTGTTCT 59.932 40.000 0.00 0.00 33.52 3.01
308 309 6.405842 GGAACTGGAAATCAACTTGTGTTCTT 60.406 38.462 0.00 0.00 33.52 2.52
309 310 6.530019 ACTGGAAATCAACTTGTGTTCTTT 57.470 33.333 6.96 0.00 33.52 2.52
310 311 6.935167 ACTGGAAATCAACTTGTGTTCTTTT 58.065 32.000 6.96 0.00 33.52 2.27
311 312 7.386059 ACTGGAAATCAACTTGTGTTCTTTTT 58.614 30.769 6.96 0.00 33.52 1.94
312 313 7.331687 ACTGGAAATCAACTTGTGTTCTTTTTG 59.668 33.333 6.96 0.00 33.52 2.44
313 314 7.158021 TGGAAATCAACTTGTGTTCTTTTTGT 58.842 30.769 6.96 0.00 33.52 2.83
314 315 8.307483 TGGAAATCAACTTGTGTTCTTTTTGTA 58.693 29.630 6.96 0.00 33.52 2.41
315 316 9.145865 GGAAATCAACTTGTGTTCTTTTTGTAA 57.854 29.630 6.96 0.00 33.52 2.41
316 317 9.952341 GAAATCAACTTGTGTTCTTTTTGTAAC 57.048 29.630 0.00 0.00 33.52 2.50
317 318 9.705290 AAATCAACTTGTGTTCTTTTTGTAACT 57.295 25.926 0.00 0.00 33.52 2.24
318 319 8.687824 ATCAACTTGTGTTCTTTTTGTAACTG 57.312 30.769 0.00 0.00 33.52 3.16
319 320 6.584563 TCAACTTGTGTTCTTTTTGTAACTGC 59.415 34.615 0.00 0.00 33.52 4.40
320 321 6.019779 ACTTGTGTTCTTTTTGTAACTGCA 57.980 33.333 0.00 0.00 0.00 4.41
321 322 6.451393 ACTTGTGTTCTTTTTGTAACTGCAA 58.549 32.000 0.00 0.00 0.00 4.08
322 323 7.096551 ACTTGTGTTCTTTTTGTAACTGCAAT 58.903 30.769 0.00 0.00 0.00 3.56
323 324 6.884096 TGTGTTCTTTTTGTAACTGCAATG 57.116 33.333 0.00 0.00 0.00 2.82
324 325 5.809562 TGTGTTCTTTTTGTAACTGCAATGG 59.190 36.000 0.00 0.00 0.00 3.16
325 326 6.039616 GTGTTCTTTTTGTAACTGCAATGGA 58.960 36.000 0.00 0.00 0.00 3.41
326 327 6.701400 GTGTTCTTTTTGTAACTGCAATGGAT 59.299 34.615 0.00 0.00 0.00 3.41
327 328 6.922957 TGTTCTTTTTGTAACTGCAATGGATC 59.077 34.615 0.00 0.00 0.00 3.36
328 329 6.647334 TCTTTTTGTAACTGCAATGGATCA 57.353 33.333 0.00 0.00 0.00 2.92
329 330 7.230849 TCTTTTTGTAACTGCAATGGATCAT 57.769 32.000 0.00 0.00 0.00 2.45
330 331 7.092079 TCTTTTTGTAACTGCAATGGATCATG 58.908 34.615 0.00 0.00 0.00 3.07
331 332 4.374843 TTGTAACTGCAATGGATCATGC 57.625 40.909 9.65 9.65 0.00 4.06
332 333 2.689471 TGTAACTGCAATGGATCATGCC 59.311 45.455 12.91 0.00 0.00 4.40
333 334 2.154567 AACTGCAATGGATCATGCCT 57.845 45.000 12.91 0.00 0.00 4.75
334 335 2.154567 ACTGCAATGGATCATGCCTT 57.845 45.000 12.91 0.30 0.00 4.35
335 336 3.301794 ACTGCAATGGATCATGCCTTA 57.698 42.857 12.91 0.00 0.00 2.69
336 337 3.634504 ACTGCAATGGATCATGCCTTAA 58.365 40.909 12.91 0.00 0.00 1.85
337 338 4.220724 ACTGCAATGGATCATGCCTTAAT 58.779 39.130 12.91 0.00 0.00 1.40
338 339 5.387788 ACTGCAATGGATCATGCCTTAATA 58.612 37.500 12.91 0.00 0.00 0.98
339 340 5.834742 ACTGCAATGGATCATGCCTTAATAA 59.165 36.000 12.91 0.00 0.00 1.40
340 341 6.495872 ACTGCAATGGATCATGCCTTAATAAT 59.504 34.615 12.91 0.00 0.00 1.28
341 342 6.927416 TGCAATGGATCATGCCTTAATAATC 58.073 36.000 12.91 0.00 0.00 1.75
342 343 6.494146 TGCAATGGATCATGCCTTAATAATCA 59.506 34.615 12.91 0.00 0.00 2.57
343 344 7.179516 TGCAATGGATCATGCCTTAATAATCAT 59.820 33.333 12.91 0.00 0.00 2.45
344 345 7.491372 GCAATGGATCATGCCTTAATAATCATG 59.509 37.037 6.19 8.26 38.05 3.07
345 346 7.655521 ATGGATCATGCCTTAATAATCATGG 57.344 36.000 12.28 0.00 37.49 3.66
346 347 5.953548 TGGATCATGCCTTAATAATCATGGG 59.046 40.000 12.28 0.00 37.49 4.00
347 348 6.189859 GGATCATGCCTTAATAATCATGGGA 58.810 40.000 12.28 0.00 37.49 4.37
348 349 6.664816 GGATCATGCCTTAATAATCATGGGAA 59.335 38.462 12.28 0.00 37.49 3.97
349 350 7.178983 GGATCATGCCTTAATAATCATGGGAAA 59.821 37.037 12.28 0.00 37.49 3.13
350 351 7.288810 TCATGCCTTAATAATCATGGGAAAC 57.711 36.000 12.28 0.00 37.49 2.78
351 352 6.838090 TCATGCCTTAATAATCATGGGAAACA 59.162 34.615 12.28 0.00 37.49 2.83
352 353 6.713762 TGCCTTAATAATCATGGGAAACAG 57.286 37.500 0.00 0.00 0.00 3.16
353 354 6.194235 TGCCTTAATAATCATGGGAAACAGT 58.806 36.000 0.00 0.00 0.00 3.55
354 355 6.667414 TGCCTTAATAATCATGGGAAACAGTT 59.333 34.615 0.00 0.00 0.00 3.16
355 356 6.980397 GCCTTAATAATCATGGGAAACAGTTG 59.020 38.462 0.00 0.00 0.00 3.16
356 357 7.147915 GCCTTAATAATCATGGGAAACAGTTGA 60.148 37.037 0.00 0.00 0.00 3.18
357 358 8.190784 CCTTAATAATCATGGGAAACAGTTGAC 58.809 37.037 0.00 0.00 0.00 3.18
358 359 5.818136 ATAATCATGGGAAACAGTTGACG 57.182 39.130 0.00 0.00 0.00 4.35
359 360 2.920724 TCATGGGAAACAGTTGACGA 57.079 45.000 0.00 0.00 0.00 4.20
360 361 3.417069 TCATGGGAAACAGTTGACGAT 57.583 42.857 0.00 0.00 0.00 3.73
361 362 4.545208 TCATGGGAAACAGTTGACGATA 57.455 40.909 0.00 0.00 0.00 2.92
362 363 4.900684 TCATGGGAAACAGTTGACGATAA 58.099 39.130 0.00 0.00 0.00 1.75
363 364 5.496556 TCATGGGAAACAGTTGACGATAAT 58.503 37.500 0.00 0.00 0.00 1.28
364 365 5.584649 TCATGGGAAACAGTTGACGATAATC 59.415 40.000 0.00 0.00 0.00 1.75
365 366 5.160607 TGGGAAACAGTTGACGATAATCT 57.839 39.130 0.00 0.00 0.00 2.40
366 367 5.175859 TGGGAAACAGTTGACGATAATCTC 58.824 41.667 0.00 0.00 0.00 2.75
367 368 5.175859 GGGAAACAGTTGACGATAATCTCA 58.824 41.667 0.00 0.00 0.00 3.27
368 369 5.817816 GGGAAACAGTTGACGATAATCTCAT 59.182 40.000 0.00 0.00 0.00 2.90
369 370 6.238211 GGGAAACAGTTGACGATAATCTCATG 60.238 42.308 0.00 0.00 0.00 3.07
370 371 6.535150 GGAAACAGTTGACGATAATCTCATGA 59.465 38.462 0.00 0.00 0.00 3.07
371 372 7.254252 GGAAACAGTTGACGATAATCTCATGAG 60.254 40.741 17.07 17.07 0.00 2.90
372 373 5.046529 ACAGTTGACGATAATCTCATGAGC 58.953 41.667 18.36 2.52 0.00 4.26
373 374 4.447054 CAGTTGACGATAATCTCATGAGCC 59.553 45.833 18.36 3.75 0.00 4.70
374 375 4.343526 AGTTGACGATAATCTCATGAGCCT 59.656 41.667 18.36 9.50 0.00 4.58
375 376 5.536538 AGTTGACGATAATCTCATGAGCCTA 59.463 40.000 18.36 11.37 0.00 3.93
376 377 6.210385 AGTTGACGATAATCTCATGAGCCTAT 59.790 38.462 18.36 15.35 0.00 2.57
377 378 6.596309 TGACGATAATCTCATGAGCCTATT 57.404 37.500 18.36 14.39 0.00 1.73
378 379 6.997655 TGACGATAATCTCATGAGCCTATTT 58.002 36.000 18.36 8.48 0.00 1.40
379 380 6.870439 TGACGATAATCTCATGAGCCTATTTG 59.130 38.462 18.36 13.76 0.00 2.32
380 381 6.763355 ACGATAATCTCATGAGCCTATTTGT 58.237 36.000 18.36 14.26 0.00 2.83
381 382 6.648310 ACGATAATCTCATGAGCCTATTTGTG 59.352 38.462 18.36 8.04 0.00 3.33
382 383 6.648310 CGATAATCTCATGAGCCTATTTGTGT 59.352 38.462 18.36 1.24 0.00 3.72
383 384 7.814587 CGATAATCTCATGAGCCTATTTGTGTA 59.185 37.037 18.36 0.00 0.00 2.90
384 385 8.839310 ATAATCTCATGAGCCTATTTGTGTAC 57.161 34.615 18.36 0.00 0.00 2.90
385 386 5.675684 TCTCATGAGCCTATTTGTGTACA 57.324 39.130 18.36 0.00 0.00 2.90
386 387 6.048732 TCTCATGAGCCTATTTGTGTACAA 57.951 37.500 18.36 0.00 0.00 2.41
387 388 6.653020 TCTCATGAGCCTATTTGTGTACAAT 58.347 36.000 18.36 0.00 35.55 2.71
388 389 7.112122 TCTCATGAGCCTATTTGTGTACAATT 58.888 34.615 18.36 0.00 35.55 2.32
389 390 7.611467 TCTCATGAGCCTATTTGTGTACAATTT 59.389 33.333 18.36 0.00 35.55 1.82
390 391 7.537715 TCATGAGCCTATTTGTGTACAATTTG 58.462 34.615 0.00 0.00 35.55 2.32
391 392 6.892658 TGAGCCTATTTGTGTACAATTTGT 57.107 33.333 7.30 7.30 35.55 2.83
392 393 6.908825 TGAGCCTATTTGTGTACAATTTGTC 58.091 36.000 5.07 0.00 35.55 3.18
393 394 6.072175 TGAGCCTATTTGTGTACAATTTGTCC 60.072 38.462 5.07 0.00 35.55 4.02
394 395 5.772672 AGCCTATTTGTGTACAATTTGTCCA 59.227 36.000 5.07 0.00 35.55 4.02
395 396 5.861787 GCCTATTTGTGTACAATTTGTCCAC 59.138 40.000 15.93 15.93 37.66 4.02
396 397 6.294508 GCCTATTTGTGTACAATTTGTCCACT 60.295 38.462 21.22 8.23 37.96 4.00
397 398 7.094549 GCCTATTTGTGTACAATTTGTCCACTA 60.095 37.037 21.22 13.83 37.96 2.74
398 399 8.956426 CCTATTTGTGTACAATTTGTCCACTAT 58.044 33.333 21.22 16.92 37.96 2.12
399 400 9.988350 CTATTTGTGTACAATTTGTCCACTATC 57.012 33.333 21.22 1.39 37.96 2.08
400 401 8.635765 ATTTGTGTACAATTTGTCCACTATCT 57.364 30.769 21.22 6.63 37.96 1.98
401 402 9.733556 ATTTGTGTACAATTTGTCCACTATCTA 57.266 29.630 21.22 4.95 37.96 1.98
402 403 8.771920 TTGTGTACAATTTGTCCACTATCTAG 57.228 34.615 21.22 0.00 37.96 2.43
403 404 7.903145 TGTGTACAATTTGTCCACTATCTAGT 58.097 34.615 21.22 0.00 37.96 2.57
404 405 8.033038 TGTGTACAATTTGTCCACTATCTAGTC 58.967 37.037 21.22 0.00 37.96 2.59
405 406 7.491696 GTGTACAATTTGTCCACTATCTAGTCC 59.508 40.741 15.61 0.00 34.83 3.85
406 407 6.875972 ACAATTTGTCCACTATCTAGTCCT 57.124 37.500 0.00 0.00 33.46 3.85
407 408 7.973048 ACAATTTGTCCACTATCTAGTCCTA 57.027 36.000 0.00 0.00 33.46 2.94
408 409 8.012957 ACAATTTGTCCACTATCTAGTCCTAG 57.987 38.462 0.00 0.00 33.46 3.02
409 410 7.620094 ACAATTTGTCCACTATCTAGTCCTAGT 59.380 37.037 0.00 0.00 33.46 2.57
410 411 7.826918 ATTTGTCCACTATCTAGTCCTAGTC 57.173 40.000 1.49 0.00 33.46 2.59
411 412 5.970501 TGTCCACTATCTAGTCCTAGTCA 57.029 43.478 1.49 0.00 33.46 3.41
412 413 6.517013 TGTCCACTATCTAGTCCTAGTCAT 57.483 41.667 1.49 0.00 33.46 3.06
413 414 6.299922 TGTCCACTATCTAGTCCTAGTCATG 58.700 44.000 1.49 0.00 33.46 3.07
414 415 6.126449 TGTCCACTATCTAGTCCTAGTCATGT 60.126 42.308 1.49 0.00 33.46 3.21
415 416 7.072076 TGTCCACTATCTAGTCCTAGTCATGTA 59.928 40.741 1.49 0.00 33.46 2.29
416 417 7.937942 GTCCACTATCTAGTCCTAGTCATGTAA 59.062 40.741 1.49 0.00 33.46 2.41
417 418 8.670490 TCCACTATCTAGTCCTAGTCATGTAAT 58.330 37.037 1.49 0.00 33.46 1.89
418 419 8.735315 CCACTATCTAGTCCTAGTCATGTAATG 58.265 40.741 1.49 0.00 39.24 1.90
419 420 9.290988 CACTATCTAGTCCTAGTCATGTAATGT 57.709 37.037 1.49 0.00 39.04 2.71
420 421 9.509956 ACTATCTAGTCCTAGTCATGTAATGTC 57.490 37.037 1.49 0.00 37.49 3.06
421 422 9.733556 CTATCTAGTCCTAGTCATGTAATGTCT 57.266 37.037 1.49 0.00 44.65 3.41
619 621 8.047911 GGTATTAGAGCTCTAGGGTTTCTTTTT 58.952 37.037 22.19 0.00 0.00 1.94
719 722 1.617018 CCGAAGGCCTCCTCATCACA 61.617 60.000 5.23 0.00 46.14 3.58
720 723 0.179089 CGAAGGCCTCCTCATCACAG 60.179 60.000 5.23 0.00 30.89 3.66
721 724 0.463474 GAAGGCCTCCTCATCACAGC 60.463 60.000 5.23 0.00 30.89 4.40
723 726 2.202987 GCCTCCTCATCACAGCCG 60.203 66.667 0.00 0.00 0.00 5.52
724 727 2.202987 CCTCCTCATCACAGCCGC 60.203 66.667 0.00 0.00 0.00 6.53
725 728 2.202987 CTCCTCATCACAGCCGCC 60.203 66.667 0.00 0.00 0.00 6.13
727 730 4.457496 CCTCATCACAGCCGCCGT 62.457 66.667 0.00 0.00 0.00 5.68
728 731 3.190849 CTCATCACAGCCGCCGTG 61.191 66.667 0.00 0.00 35.63 4.94
729 732 3.939837 CTCATCACAGCCGCCGTGT 62.940 63.158 6.62 0.00 35.79 4.49
730 733 3.792047 CATCACAGCCGCCGTGTG 61.792 66.667 6.62 6.53 45.65 3.82
779 828 4.699522 GCGGTTCCCTGCTTCCGT 62.700 66.667 0.00 0.00 44.07 4.69
781 830 2.046217 GGTTCCCTGCTTCCGTCC 60.046 66.667 0.00 0.00 0.00 4.79
803 852 4.680237 CGCACAGGACTCCCGCAA 62.680 66.667 0.00 0.00 37.58 4.85
804 853 2.743928 GCACAGGACTCCCGCAAG 60.744 66.667 0.00 0.00 37.58 4.01
806 855 1.374758 CACAGGACTCCCGCAAGTC 60.375 63.158 6.83 6.83 44.08 3.01
810 859 2.435059 GACTCCCGCAAGTCCAGC 60.435 66.667 4.54 0.00 39.85 4.85
811 860 3.959991 GACTCCCGCAAGTCCAGCC 62.960 68.421 4.54 0.00 39.85 4.85
862 928 4.680237 CGCACAGGTCTCCCGCAA 62.680 66.667 0.00 0.00 35.12 4.85
864 930 2.743718 CACAGGTCTCCCGCAAGT 59.256 61.111 0.00 0.00 35.12 3.16
865 931 1.374758 CACAGGTCTCCCGCAAGTC 60.375 63.158 0.00 0.00 35.12 3.01
866 932 1.534235 ACAGGTCTCCCGCAAGTCT 60.534 57.895 0.00 0.00 35.12 3.24
868 934 2.435059 GGTCTCCCGCAAGTCTGC 60.435 66.667 0.00 0.00 45.75 4.26
878 944 2.358939 GCAAGTCTGCTGATTTTGGG 57.641 50.000 16.74 3.01 45.74 4.12
914 1134 4.436998 CTCGCCGTGTGGTCCTCC 62.437 72.222 0.00 0.00 37.67 4.30
918 1138 4.003788 CCGTGTGGTCCTCCGCTT 62.004 66.667 0.00 0.00 43.94 4.68
919 1139 2.432628 CGTGTGGTCCTCCGCTTC 60.433 66.667 0.00 0.00 43.94 3.86
920 1140 2.047179 GTGTGGTCCTCCGCTTCC 60.047 66.667 0.00 0.00 43.94 3.46
921 1141 3.691342 TGTGGTCCTCCGCTTCCG 61.691 66.667 0.00 0.00 43.94 4.30
925 1145 4.821589 GTCCTCCGCTTCCGCCAG 62.822 72.222 0.00 0.00 0.00 4.85
1344 1658 1.607148 GTTTACACCCAGTGGCTTGAC 59.393 52.381 14.35 1.10 37.94 3.18
1477 1791 3.412624 GAGCCCTCTGGTGATGCCC 62.413 68.421 0.00 0.00 36.04 5.36
1638 1952 2.934083 GGCTATCCAGGCCGATTTC 58.066 57.895 0.00 0.00 41.45 2.17
1797 2111 1.529010 TGCTGGTTTGCTGGAGGTG 60.529 57.895 0.00 0.00 0.00 4.00
2130 2450 2.369860 TGGTTCTGTGACTGATGCTTCT 59.630 45.455 0.88 0.00 0.00 2.85
2241 2561 2.545731 GCTTTGTCCTCTCTTCGATCC 58.454 52.381 0.00 0.00 0.00 3.36
2330 2653 6.688073 TCTTTCCACTCCTTATTCTGTTCT 57.312 37.500 0.00 0.00 0.00 3.01
3168 3491 1.698506 CCGAGGCTATCTCCACTTCT 58.301 55.000 0.00 0.00 39.30 2.85
3440 3770 4.279671 AGACGTGACTTTTGATGAGTCTCT 59.720 41.667 0.00 0.00 43.07 3.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.031235 CCGCAATCATGGCAATGGTA 58.969 50.000 0.00 0.00 34.30 3.25
8 9 0.599060 TGCATATGCCGCAATCATGG 59.401 50.000 24.54 0.00 41.18 3.66
9 10 1.402325 CCTGCATATGCCGCAATCATG 60.402 52.381 24.54 2.97 39.30 3.07
10 11 0.885879 CCTGCATATGCCGCAATCAT 59.114 50.000 24.54 0.00 39.30 2.45
11 12 0.466007 ACCTGCATATGCCGCAATCA 60.466 50.000 24.54 3.35 39.30 2.57
12 13 0.039798 CACCTGCATATGCCGCAATC 60.040 55.000 24.54 0.00 39.30 2.67
13 14 0.466007 TCACCTGCATATGCCGCAAT 60.466 50.000 24.54 4.30 39.30 3.56
14 15 1.077858 TCACCTGCATATGCCGCAA 60.078 52.632 24.54 5.25 39.30 4.85
15 16 1.524393 CTCACCTGCATATGCCGCA 60.524 57.895 24.54 5.63 41.18 5.69
16 17 2.901292 GCTCACCTGCATATGCCGC 61.901 63.158 24.54 12.94 41.18 6.53
17 18 1.226686 GAGCTCACCTGCATATGCCG 61.227 60.000 24.54 18.11 41.18 5.69
18 19 0.108207 AGAGCTCACCTGCATATGCC 59.892 55.000 24.54 7.46 41.18 4.40
19 20 2.827800 TAGAGCTCACCTGCATATGC 57.172 50.000 21.09 21.09 42.50 3.14
20 21 4.272018 GTGTTTAGAGCTCACCTGCATATG 59.728 45.833 17.77 0.00 34.99 1.78
21 22 4.163078 AGTGTTTAGAGCTCACCTGCATAT 59.837 41.667 17.77 0.00 34.99 1.78
22 23 3.515502 AGTGTTTAGAGCTCACCTGCATA 59.484 43.478 17.77 0.00 34.99 3.14
23 24 2.304180 AGTGTTTAGAGCTCACCTGCAT 59.696 45.455 17.77 0.00 34.99 3.96
24 25 1.694150 AGTGTTTAGAGCTCACCTGCA 59.306 47.619 17.77 5.25 34.99 4.41
25 26 2.464157 AGTGTTTAGAGCTCACCTGC 57.536 50.000 17.77 2.51 33.21 4.85
26 27 5.590530 AGATAGTGTTTAGAGCTCACCTG 57.409 43.478 17.77 0.00 33.21 4.00
27 28 5.717178 TGAAGATAGTGTTTAGAGCTCACCT 59.283 40.000 17.77 7.54 33.21 4.00
28 29 5.808030 GTGAAGATAGTGTTTAGAGCTCACC 59.192 44.000 17.77 0.63 33.21 4.02
29 30 6.626302 AGTGAAGATAGTGTTTAGAGCTCAC 58.374 40.000 17.77 6.08 0.00 3.51
30 31 6.842437 AGTGAAGATAGTGTTTAGAGCTCA 57.158 37.500 17.77 0.00 0.00 4.26
31 32 7.093992 ACAAGTGAAGATAGTGTTTAGAGCTC 58.906 38.462 5.27 5.27 0.00 4.09
32 33 6.998802 ACAAGTGAAGATAGTGTTTAGAGCT 58.001 36.000 0.00 0.00 0.00 4.09
33 34 8.934507 ATACAAGTGAAGATAGTGTTTAGAGC 57.065 34.615 0.00 0.00 0.00 4.09
42 43 9.757227 GCTTGATAAGATACAAGTGAAGATAGT 57.243 33.333 0.00 0.00 43.41 2.12
43 44 9.755804 TGCTTGATAAGATACAAGTGAAGATAG 57.244 33.333 0.00 0.00 43.41 2.08
45 46 9.453572 TTTGCTTGATAAGATACAAGTGAAGAT 57.546 29.630 0.00 0.00 43.41 2.40
46 47 8.846943 TTTGCTTGATAAGATACAAGTGAAGA 57.153 30.769 0.00 0.00 43.41 2.87
47 48 8.725148 ACTTTGCTTGATAAGATACAAGTGAAG 58.275 33.333 4.01 4.01 43.41 3.02
48 49 8.621532 ACTTTGCTTGATAAGATACAAGTGAA 57.378 30.769 0.00 0.00 43.41 3.18
49 50 8.097038 AGACTTTGCTTGATAAGATACAAGTGA 58.903 33.333 0.00 0.00 43.41 3.41
50 51 8.261492 AGACTTTGCTTGATAAGATACAAGTG 57.739 34.615 0.00 0.00 43.41 3.16
51 52 8.854614 AAGACTTTGCTTGATAAGATACAAGT 57.145 30.769 0.00 0.00 43.41 3.16
54 55 9.162764 GGTTAAGACTTTGCTTGATAAGATACA 57.837 33.333 0.00 0.00 0.00 2.29
55 56 8.613482 GGGTTAAGACTTTGCTTGATAAGATAC 58.387 37.037 0.00 0.00 0.00 2.24
56 57 8.548877 AGGGTTAAGACTTTGCTTGATAAGATA 58.451 33.333 0.00 0.00 0.00 1.98
57 58 7.337942 CAGGGTTAAGACTTTGCTTGATAAGAT 59.662 37.037 0.00 0.00 0.00 2.40
58 59 6.655003 CAGGGTTAAGACTTTGCTTGATAAGA 59.345 38.462 0.00 0.00 0.00 2.10
59 60 6.431234 ACAGGGTTAAGACTTTGCTTGATAAG 59.569 38.462 0.00 0.00 0.00 1.73
60 61 6.303839 ACAGGGTTAAGACTTTGCTTGATAA 58.696 36.000 0.00 0.00 0.00 1.75
61 62 5.876357 ACAGGGTTAAGACTTTGCTTGATA 58.124 37.500 0.00 0.00 0.00 2.15
62 63 4.729868 ACAGGGTTAAGACTTTGCTTGAT 58.270 39.130 0.00 0.00 0.00 2.57
63 64 4.164843 ACAGGGTTAAGACTTTGCTTGA 57.835 40.909 0.00 0.00 0.00 3.02
64 65 4.918810 AACAGGGTTAAGACTTTGCTTG 57.081 40.909 0.00 0.00 0.00 4.01
65 66 5.201243 AGAAACAGGGTTAAGACTTTGCTT 58.799 37.500 0.00 0.00 0.00 3.91
66 67 4.793201 AGAAACAGGGTTAAGACTTTGCT 58.207 39.130 0.00 0.00 0.00 3.91
67 68 6.819397 ATAGAAACAGGGTTAAGACTTTGC 57.181 37.500 0.00 0.00 0.00 3.68
68 69 8.391075 TGAATAGAAACAGGGTTAAGACTTTG 57.609 34.615 0.00 0.00 0.00 2.77
69 70 8.990163 TTGAATAGAAACAGGGTTAAGACTTT 57.010 30.769 0.00 0.00 0.00 2.66
70 71 8.990163 TTTGAATAGAAACAGGGTTAAGACTT 57.010 30.769 0.00 0.00 0.00 3.01
71 72 9.232473 GATTTGAATAGAAACAGGGTTAAGACT 57.768 33.333 0.00 0.00 0.00 3.24
72 73 9.010029 TGATTTGAATAGAAACAGGGTTAAGAC 57.990 33.333 0.00 0.00 0.00 3.01
73 74 9.581289 TTGATTTGAATAGAAACAGGGTTAAGA 57.419 29.630 0.00 0.00 0.00 2.10
74 75 9.626045 GTTGATTTGAATAGAAACAGGGTTAAG 57.374 33.333 0.00 0.00 0.00 1.85
75 76 8.581578 GGTTGATTTGAATAGAAACAGGGTTAA 58.418 33.333 0.00 0.00 0.00 2.01
76 77 7.726291 TGGTTGATTTGAATAGAAACAGGGTTA 59.274 33.333 0.00 0.00 0.00 2.85
77 78 6.553100 TGGTTGATTTGAATAGAAACAGGGTT 59.447 34.615 0.00 0.00 0.00 4.11
78 79 6.074648 TGGTTGATTTGAATAGAAACAGGGT 58.925 36.000 0.00 0.00 0.00 4.34
79 80 6.350445 CCTGGTTGATTTGAATAGAAACAGGG 60.350 42.308 16.98 7.59 0.00 4.45
80 81 6.350445 CCCTGGTTGATTTGAATAGAAACAGG 60.350 42.308 17.45 17.45 0.00 4.00
81 82 6.209391 ACCCTGGTTGATTTGAATAGAAACAG 59.791 38.462 0.00 0.00 0.00 3.16
82 83 6.074648 ACCCTGGTTGATTTGAATAGAAACA 58.925 36.000 0.00 0.00 0.00 2.83
83 84 6.590234 ACCCTGGTTGATTTGAATAGAAAC 57.410 37.500 0.00 0.00 0.00 2.78
98 99 4.531426 TTGCCGCCAACCCTGGTT 62.531 61.111 0.00 0.00 45.53 3.67
99 100 4.974721 CTTGCCGCCAACCCTGGT 62.975 66.667 0.00 0.00 45.53 4.00
101 102 4.659172 TCCTTGCCGCCAACCCTG 62.659 66.667 0.00 0.00 0.00 4.45
102 103 2.937959 TTTTCCTTGCCGCCAACCCT 62.938 55.000 0.00 0.00 0.00 4.34
103 104 2.503382 TTTTCCTTGCCGCCAACCC 61.503 57.895 0.00 0.00 0.00 4.11
104 105 1.300620 GTTTTCCTTGCCGCCAACC 60.301 57.895 0.00 0.00 0.00 3.77
105 106 0.955905 TAGTTTTCCTTGCCGCCAAC 59.044 50.000 0.00 0.00 0.00 3.77
106 107 0.955905 GTAGTTTTCCTTGCCGCCAA 59.044 50.000 0.00 0.00 0.00 4.52
107 108 0.109723 AGTAGTTTTCCTTGCCGCCA 59.890 50.000 0.00 0.00 0.00 5.69
108 109 1.199327 GAAGTAGTTTTCCTTGCCGCC 59.801 52.381 0.00 0.00 0.00 6.13
109 110 1.199327 GGAAGTAGTTTTCCTTGCCGC 59.801 52.381 0.00 0.00 42.73 6.53
110 111 2.225727 GTGGAAGTAGTTTTCCTTGCCG 59.774 50.000 6.37 0.00 45.59 5.69
111 112 3.253432 CAGTGGAAGTAGTTTTCCTTGCC 59.747 47.826 6.37 0.00 45.59 4.52
112 113 3.883489 ACAGTGGAAGTAGTTTTCCTTGC 59.117 43.478 6.37 0.00 45.59 4.01
113 114 4.261197 GCACAGTGGAAGTAGTTTTCCTTG 60.261 45.833 1.84 7.15 45.59 3.61
114 115 3.883489 GCACAGTGGAAGTAGTTTTCCTT 59.117 43.478 1.84 0.00 45.59 3.36
115 116 3.118038 TGCACAGTGGAAGTAGTTTTCCT 60.118 43.478 1.84 0.00 45.59 3.36
116 117 3.211045 TGCACAGTGGAAGTAGTTTTCC 58.789 45.455 1.84 0.00 45.59 3.13
117 118 4.893424 TTGCACAGTGGAAGTAGTTTTC 57.107 40.909 2.84 0.00 0.00 2.29
118 119 4.705023 ACTTTGCACAGTGGAAGTAGTTTT 59.295 37.500 4.33 0.00 0.00 2.43
119 120 4.096382 CACTTTGCACAGTGGAAGTAGTTT 59.904 41.667 22.67 0.00 40.60 2.66
120 121 3.627577 CACTTTGCACAGTGGAAGTAGTT 59.372 43.478 22.67 0.00 40.60 2.24
121 122 3.206150 CACTTTGCACAGTGGAAGTAGT 58.794 45.455 22.67 6.93 40.60 2.73
122 123 3.885484 CACTTTGCACAGTGGAAGTAG 57.115 47.619 22.67 6.30 40.60 2.57
130 131 1.608590 GCATACCACACTTTGCACAGT 59.391 47.619 0.00 0.00 35.22 3.55
131 132 1.881973 AGCATACCACACTTTGCACAG 59.118 47.619 0.00 0.00 37.56 3.66
132 133 1.979855 AGCATACCACACTTTGCACA 58.020 45.000 0.00 0.00 37.56 4.57
133 134 5.811399 TTATAGCATACCACACTTTGCAC 57.189 39.130 0.00 0.00 37.56 4.57
134 135 6.118852 TGATTATAGCATACCACACTTTGCA 58.881 36.000 0.00 0.00 37.56 4.08
135 136 6.618287 TGATTATAGCATACCACACTTTGC 57.382 37.500 0.00 0.00 35.34 3.68
136 137 7.040892 AGCATGATTATAGCATACCACACTTTG 60.041 37.037 0.00 0.00 0.00 2.77
137 138 7.000472 AGCATGATTATAGCATACCACACTTT 59.000 34.615 0.00 0.00 0.00 2.66
138 139 6.429078 CAGCATGATTATAGCATACCACACTT 59.571 38.462 0.00 0.00 39.69 3.16
139 140 5.936372 CAGCATGATTATAGCATACCACACT 59.064 40.000 0.00 0.00 39.69 3.55
140 141 5.122869 CCAGCATGATTATAGCATACCACAC 59.877 44.000 0.00 0.00 39.69 3.82
141 142 5.247862 CCAGCATGATTATAGCATACCACA 58.752 41.667 0.00 0.00 39.69 4.17
142 143 4.095483 GCCAGCATGATTATAGCATACCAC 59.905 45.833 0.00 0.00 39.69 4.16
143 144 4.019051 AGCCAGCATGATTATAGCATACCA 60.019 41.667 0.00 0.00 39.69 3.25
144 145 4.521146 AGCCAGCATGATTATAGCATACC 58.479 43.478 0.00 0.00 39.69 2.73
145 146 6.072286 ACAAAGCCAGCATGATTATAGCATAC 60.072 38.462 0.00 0.00 39.69 2.39
146 147 6.005823 ACAAAGCCAGCATGATTATAGCATA 58.994 36.000 0.00 0.00 39.69 3.14
147 148 4.831155 ACAAAGCCAGCATGATTATAGCAT 59.169 37.500 0.00 0.00 39.69 3.79
148 149 4.037089 CACAAAGCCAGCATGATTATAGCA 59.963 41.667 0.00 0.00 39.69 3.49
149 150 4.037208 ACACAAAGCCAGCATGATTATAGC 59.963 41.667 0.00 0.00 39.69 2.97
150 151 5.762825 ACACAAAGCCAGCATGATTATAG 57.237 39.130 0.00 0.00 39.69 1.31
151 152 7.339212 AGTTAACACAAAGCCAGCATGATTATA 59.661 33.333 8.61 0.00 39.69 0.98
152 153 6.153340 AGTTAACACAAAGCCAGCATGATTAT 59.847 34.615 8.61 0.00 39.69 1.28
153 154 5.476599 AGTTAACACAAAGCCAGCATGATTA 59.523 36.000 8.61 0.02 39.69 1.75
154 155 4.281688 AGTTAACACAAAGCCAGCATGATT 59.718 37.500 8.61 0.76 39.69 2.57
155 156 3.828451 AGTTAACACAAAGCCAGCATGAT 59.172 39.130 8.61 0.00 39.69 2.45
156 157 3.004629 CAGTTAACACAAAGCCAGCATGA 59.995 43.478 8.61 0.00 39.69 3.07
157 158 3.243501 ACAGTTAACACAAAGCCAGCATG 60.244 43.478 8.61 0.00 0.00 4.06
158 159 2.958355 ACAGTTAACACAAAGCCAGCAT 59.042 40.909 8.61 0.00 0.00 3.79
159 160 2.374184 ACAGTTAACACAAAGCCAGCA 58.626 42.857 8.61 0.00 0.00 4.41
160 161 3.115554 CAACAGTTAACACAAAGCCAGC 58.884 45.455 8.61 0.00 0.00 4.85
161 162 4.370364 ACAACAGTTAACACAAAGCCAG 57.630 40.909 8.61 0.00 0.00 4.85
162 163 4.381079 GGAACAACAGTTAACACAAAGCCA 60.381 41.667 8.61 0.00 0.00 4.75
163 164 4.109766 GGAACAACAGTTAACACAAAGCC 58.890 43.478 8.61 0.00 0.00 4.35
164 165 4.739195 TGGAACAACAGTTAACACAAAGC 58.261 39.130 8.61 0.00 31.92 3.51
165 166 6.027749 GTCTGGAACAACAGTTAACACAAAG 58.972 40.000 8.61 0.00 38.70 2.77
166 167 5.708230 AGTCTGGAACAACAGTTAACACAAA 59.292 36.000 8.61 0.00 38.70 2.83
167 168 5.250200 AGTCTGGAACAACAGTTAACACAA 58.750 37.500 8.61 0.00 38.70 3.33
168 169 4.839121 AGTCTGGAACAACAGTTAACACA 58.161 39.130 8.61 0.00 38.70 3.72
169 170 4.873827 TGAGTCTGGAACAACAGTTAACAC 59.126 41.667 8.61 0.00 38.70 3.32
170 171 5.092554 TGAGTCTGGAACAACAGTTAACA 57.907 39.130 8.61 0.00 38.70 2.41
171 172 5.758296 TCATGAGTCTGGAACAACAGTTAAC 59.242 40.000 0.00 0.00 38.70 2.01
172 173 5.758296 GTCATGAGTCTGGAACAACAGTTAA 59.242 40.000 0.00 0.00 38.70 2.01
173 174 5.163353 TGTCATGAGTCTGGAACAACAGTTA 60.163 40.000 0.00 0.00 38.70 2.24
174 175 4.130118 GTCATGAGTCTGGAACAACAGTT 58.870 43.478 0.00 0.00 38.70 3.16
175 176 3.134623 TGTCATGAGTCTGGAACAACAGT 59.865 43.478 0.00 0.00 38.70 3.55
176 177 3.732212 TGTCATGAGTCTGGAACAACAG 58.268 45.455 0.00 0.00 38.70 3.16
177 178 3.134623 ACTGTCATGAGTCTGGAACAACA 59.865 43.478 0.00 0.00 38.70 3.33
178 179 3.496130 CACTGTCATGAGTCTGGAACAAC 59.504 47.826 0.00 0.00 38.70 3.32
179 180 3.732212 CACTGTCATGAGTCTGGAACAA 58.268 45.455 0.00 0.00 38.70 2.83
180 181 2.548707 GCACTGTCATGAGTCTGGAACA 60.549 50.000 0.00 0.00 0.00 3.18
181 182 2.072298 GCACTGTCATGAGTCTGGAAC 58.928 52.381 0.00 0.00 0.00 3.62
182 183 1.002430 GGCACTGTCATGAGTCTGGAA 59.998 52.381 0.00 0.00 0.00 3.53
183 184 0.610174 GGCACTGTCATGAGTCTGGA 59.390 55.000 0.00 0.00 0.00 3.86
184 185 0.322648 TGGCACTGTCATGAGTCTGG 59.677 55.000 0.00 0.00 0.00 3.86
185 186 2.398252 ATGGCACTGTCATGAGTCTG 57.602 50.000 0.00 0.00 0.00 3.51
191 192 4.649088 AATCAATCATGGCACTGTCATG 57.351 40.909 16.28 16.28 45.75 3.07
192 193 4.464951 ACAAATCAATCATGGCACTGTCAT 59.535 37.500 0.00 0.00 0.00 3.06
193 194 3.827876 ACAAATCAATCATGGCACTGTCA 59.172 39.130 0.00 0.00 0.00 3.58
194 195 4.171005 CACAAATCAATCATGGCACTGTC 58.829 43.478 0.00 0.00 0.00 3.51
195 196 3.615592 GCACAAATCAATCATGGCACTGT 60.616 43.478 0.00 0.00 0.00 3.55
196 197 2.927477 GCACAAATCAATCATGGCACTG 59.073 45.455 0.00 0.00 0.00 3.66
197 198 2.093869 GGCACAAATCAATCATGGCACT 60.094 45.455 0.00 0.00 35.99 4.40
198 199 2.093869 AGGCACAAATCAATCATGGCAC 60.094 45.455 0.00 0.00 38.25 5.01
199 200 2.181125 AGGCACAAATCAATCATGGCA 58.819 42.857 0.00 0.00 38.25 4.92
200 201 2.973694 AGGCACAAATCAATCATGGC 57.026 45.000 0.00 0.00 36.17 4.40
201 202 4.823157 TCAAAGGCACAAATCAATCATGG 58.177 39.130 0.00 0.00 0.00 3.66
202 203 5.475719 ACTCAAAGGCACAAATCAATCATG 58.524 37.500 0.00 0.00 0.00 3.07
203 204 5.733620 ACTCAAAGGCACAAATCAATCAT 57.266 34.783 0.00 0.00 0.00 2.45
204 205 6.647334 TTACTCAAAGGCACAAATCAATCA 57.353 33.333 0.00 0.00 0.00 2.57
205 206 7.487189 CAGATTACTCAAAGGCACAAATCAATC 59.513 37.037 0.00 0.00 0.00 2.67
206 207 7.318141 CAGATTACTCAAAGGCACAAATCAAT 58.682 34.615 0.00 0.00 0.00 2.57
207 208 6.680810 CAGATTACTCAAAGGCACAAATCAA 58.319 36.000 0.00 0.00 0.00 2.57
208 209 5.335897 GCAGATTACTCAAAGGCACAAATCA 60.336 40.000 0.00 0.00 0.00 2.57
209 210 5.098211 GCAGATTACTCAAAGGCACAAATC 58.902 41.667 0.00 0.00 0.00 2.17
210 211 4.523943 TGCAGATTACTCAAAGGCACAAAT 59.476 37.500 0.00 0.00 0.00 2.32
211 212 3.888323 TGCAGATTACTCAAAGGCACAAA 59.112 39.130 0.00 0.00 0.00 2.83
212 213 3.485394 TGCAGATTACTCAAAGGCACAA 58.515 40.909 0.00 0.00 0.00 3.33
213 214 3.138884 TGCAGATTACTCAAAGGCACA 57.861 42.857 0.00 0.00 0.00 4.57
214 215 3.691118 TCATGCAGATTACTCAAAGGCAC 59.309 43.478 0.00 0.00 32.04 5.01
215 216 3.954200 TCATGCAGATTACTCAAAGGCA 58.046 40.909 0.00 0.00 0.00 4.75
216 217 4.792057 GCATCATGCAGATTACTCAAAGGC 60.792 45.833 4.20 0.00 44.26 4.35
217 218 4.856664 GCATCATGCAGATTACTCAAAGG 58.143 43.478 4.20 0.00 44.26 3.11
237 238 7.609918 TCAGGAAAAAGTATTTATGCTACTGCA 59.390 33.333 0.00 0.00 46.59 4.41
238 239 7.985476 TCAGGAAAAAGTATTTATGCTACTGC 58.015 34.615 0.00 0.00 37.28 4.40
246 247 9.908152 CGGAAAGTTTCAGGAAAAAGTATTTAT 57.092 29.630 17.16 0.00 37.28 1.40
247 248 8.905850 ACGGAAAGTTTCAGGAAAAAGTATTTA 58.094 29.630 18.17 0.00 37.28 1.40
248 249 7.778083 ACGGAAAGTTTCAGGAAAAAGTATTT 58.222 30.769 18.17 0.00 42.41 1.40
249 250 7.342769 ACGGAAAGTTTCAGGAAAAAGTATT 57.657 32.000 18.17 0.00 31.33 1.89
250 251 6.954487 ACGGAAAGTTTCAGGAAAAAGTAT 57.046 33.333 18.17 0.00 31.33 2.12
251 252 6.600427 AGAACGGAAAGTTTCAGGAAAAAGTA 59.400 34.615 18.17 0.00 44.35 2.24
252 253 5.417894 AGAACGGAAAGTTTCAGGAAAAAGT 59.582 36.000 18.17 3.11 44.35 2.66
253 254 5.891451 AGAACGGAAAGTTTCAGGAAAAAG 58.109 37.500 18.17 2.60 44.35 2.27
254 255 5.163591 GGAGAACGGAAAGTTTCAGGAAAAA 60.164 40.000 18.17 0.00 44.35 1.94
255 256 4.337274 GGAGAACGGAAAGTTTCAGGAAAA 59.663 41.667 18.17 0.00 44.35 2.29
256 257 3.881089 GGAGAACGGAAAGTTTCAGGAAA 59.119 43.478 18.17 0.00 44.35 3.13
257 258 3.473625 GGAGAACGGAAAGTTTCAGGAA 58.526 45.455 18.17 0.00 44.35 3.36
258 259 2.224450 GGGAGAACGGAAAGTTTCAGGA 60.224 50.000 18.17 0.00 44.35 3.86
259 260 2.152016 GGGAGAACGGAAAGTTTCAGG 58.848 52.381 18.17 11.41 44.35 3.86
260 261 1.798813 CGGGAGAACGGAAAGTTTCAG 59.201 52.381 17.16 15.22 44.35 3.02
261 262 1.873698 CGGGAGAACGGAAAGTTTCA 58.126 50.000 17.16 0.00 44.35 2.69
262 263 0.516001 GCGGGAGAACGGAAAGTTTC 59.484 55.000 7.09 7.09 44.35 2.78
263 264 0.108019 AGCGGGAGAACGGAAAGTTT 59.892 50.000 0.00 0.00 44.35 2.66
264 265 3.909945 CCAGCGGGAGAACGGAAAGTT 62.910 57.143 0.00 0.00 40.81 2.66
265 266 1.004918 CAGCGGGAGAACGGAAAGT 60.005 57.895 0.00 0.00 0.00 2.66
266 267 1.741770 CCAGCGGGAGAACGGAAAG 60.742 63.158 0.00 0.00 35.59 2.62
267 268 1.760479 TTCCAGCGGGAGAACGGAAA 61.760 55.000 5.52 0.00 46.01 3.13
268 269 2.211410 TTCCAGCGGGAGAACGGAA 61.211 57.895 5.52 0.00 46.01 4.30
269 270 2.602267 TTCCAGCGGGAGAACGGA 60.602 61.111 5.52 0.00 46.01 4.69
270 271 2.434359 GTTCCAGCGGGAGAACGG 60.434 66.667 5.52 0.00 46.01 4.44
271 272 1.738099 CAGTTCCAGCGGGAGAACG 60.738 63.158 5.52 0.00 46.01 3.95
272 273 1.376037 CCAGTTCCAGCGGGAGAAC 60.376 63.158 5.52 2.40 46.01 3.01
273 274 1.125093 TTCCAGTTCCAGCGGGAGAA 61.125 55.000 5.52 3.44 46.01 2.87
274 275 1.125093 TTTCCAGTTCCAGCGGGAGA 61.125 55.000 5.52 0.00 46.01 3.71
275 276 0.035056 ATTTCCAGTTCCAGCGGGAG 60.035 55.000 5.52 0.00 46.01 4.30
276 277 0.035439 GATTTCCAGTTCCAGCGGGA 60.035 55.000 0.00 0.00 43.03 5.14
277 278 0.322456 TGATTTCCAGTTCCAGCGGG 60.322 55.000 0.00 0.00 0.00 6.13
278 279 1.200020 GTTGATTTCCAGTTCCAGCGG 59.800 52.381 0.00 0.00 0.00 5.52
279 280 2.154462 AGTTGATTTCCAGTTCCAGCG 58.846 47.619 0.00 0.00 0.00 5.18
280 281 3.319122 ACAAGTTGATTTCCAGTTCCAGC 59.681 43.478 10.54 0.00 0.00 4.85
281 282 4.339247 ACACAAGTTGATTTCCAGTTCCAG 59.661 41.667 10.54 0.00 0.00 3.86
282 283 4.277476 ACACAAGTTGATTTCCAGTTCCA 58.723 39.130 10.54 0.00 0.00 3.53
283 284 4.918810 ACACAAGTTGATTTCCAGTTCC 57.081 40.909 10.54 0.00 0.00 3.62
284 285 6.136541 AGAACACAAGTTGATTTCCAGTTC 57.863 37.500 10.54 10.74 38.30 3.01
285 286 6.530019 AAGAACACAAGTTGATTTCCAGTT 57.470 33.333 10.54 2.74 38.30 3.16
286 287 6.530019 AAAGAACACAAGTTGATTTCCAGT 57.470 33.333 10.54 0.00 38.30 4.00
287 288 7.331687 ACAAAAAGAACACAAGTTGATTTCCAG 59.668 33.333 10.54 3.20 38.30 3.86
288 289 7.158021 ACAAAAAGAACACAAGTTGATTTCCA 58.842 30.769 10.54 0.00 38.30 3.53
289 290 7.595311 ACAAAAAGAACACAAGTTGATTTCC 57.405 32.000 10.54 0.00 38.30 3.13
290 291 9.952341 GTTACAAAAAGAACACAAGTTGATTTC 57.048 29.630 10.54 10.92 38.30 2.17
291 292 9.705290 AGTTACAAAAAGAACACAAGTTGATTT 57.295 25.926 10.54 1.50 38.30 2.17
292 293 9.139174 CAGTTACAAAAAGAACACAAGTTGATT 57.861 29.630 10.54 3.28 38.30 2.57
293 294 7.275560 GCAGTTACAAAAAGAACACAAGTTGAT 59.724 33.333 10.54 0.00 38.30 2.57
294 295 6.584563 GCAGTTACAAAAAGAACACAAGTTGA 59.415 34.615 10.54 0.00 38.30 3.18
295 296 6.364706 TGCAGTTACAAAAAGAACACAAGTTG 59.635 34.615 0.00 0.00 38.30 3.16
296 297 6.451393 TGCAGTTACAAAAAGAACACAAGTT 58.549 32.000 0.00 0.00 41.64 2.66
297 298 6.019779 TGCAGTTACAAAAAGAACACAAGT 57.980 33.333 0.00 0.00 0.00 3.16
298 299 6.942886 TTGCAGTTACAAAAAGAACACAAG 57.057 33.333 0.00 0.00 0.00 3.16
299 300 6.312426 CCATTGCAGTTACAAAAAGAACACAA 59.688 34.615 0.00 0.00 32.27 3.33
300 301 5.809562 CCATTGCAGTTACAAAAAGAACACA 59.190 36.000 0.00 0.00 32.27 3.72
301 302 6.039616 TCCATTGCAGTTACAAAAAGAACAC 58.960 36.000 0.00 0.00 32.27 3.32
302 303 6.214191 TCCATTGCAGTTACAAAAAGAACA 57.786 33.333 0.00 0.00 32.27 3.18
303 304 6.922957 TGATCCATTGCAGTTACAAAAAGAAC 59.077 34.615 0.00 0.00 32.27 3.01
304 305 7.048629 TGATCCATTGCAGTTACAAAAAGAA 57.951 32.000 0.00 0.00 32.27 2.52
305 306 6.647334 TGATCCATTGCAGTTACAAAAAGA 57.353 33.333 0.00 0.00 32.27 2.52
306 307 6.183360 GCATGATCCATTGCAGTTACAAAAAG 60.183 38.462 0.00 0.00 32.27 2.27
307 308 5.638657 GCATGATCCATTGCAGTTACAAAAA 59.361 36.000 0.00 0.00 32.27 1.94
308 309 5.170021 GCATGATCCATTGCAGTTACAAAA 58.830 37.500 0.00 0.00 32.27 2.44
309 310 4.381825 GGCATGATCCATTGCAGTTACAAA 60.382 41.667 12.63 0.00 32.27 2.83
310 311 3.130869 GGCATGATCCATTGCAGTTACAA 59.869 43.478 12.63 0.00 0.00 2.41
311 312 2.689471 GGCATGATCCATTGCAGTTACA 59.311 45.455 12.63 0.00 0.00 2.41
312 313 2.954318 AGGCATGATCCATTGCAGTTAC 59.046 45.455 12.63 0.00 0.00 2.50
313 314 3.301794 AGGCATGATCCATTGCAGTTA 57.698 42.857 12.63 0.00 0.00 2.24
314 315 2.154567 AGGCATGATCCATTGCAGTT 57.845 45.000 12.63 0.00 0.00 3.16
315 316 2.154567 AAGGCATGATCCATTGCAGT 57.845 45.000 12.63 0.00 0.00 4.40
316 317 4.866508 ATTAAGGCATGATCCATTGCAG 57.133 40.909 12.63 0.00 0.00 4.41
317 318 6.494146 TGATTATTAAGGCATGATCCATTGCA 59.506 34.615 12.63 0.00 0.00 4.08
318 319 6.927416 TGATTATTAAGGCATGATCCATTGC 58.073 36.000 0.00 4.31 0.00 3.56
319 320 7.979537 CCATGATTATTAAGGCATGATCCATTG 59.020 37.037 17.17 0.00 40.29 2.82
320 321 7.125204 CCCATGATTATTAAGGCATGATCCATT 59.875 37.037 17.17 0.00 40.29 3.16
321 322 6.610020 CCCATGATTATTAAGGCATGATCCAT 59.390 38.462 17.17 0.00 40.29 3.41
322 323 5.953548 CCCATGATTATTAAGGCATGATCCA 59.046 40.000 17.17 0.00 40.29 3.41
323 324 6.189859 TCCCATGATTATTAAGGCATGATCC 58.810 40.000 17.17 0.00 40.29 3.36
324 325 7.707624 TTCCCATGATTATTAAGGCATGATC 57.292 36.000 17.17 0.00 40.29 2.92
325 326 7.510001 TGTTTCCCATGATTATTAAGGCATGAT 59.490 33.333 17.17 0.00 40.29 2.45
326 327 6.838090 TGTTTCCCATGATTATTAAGGCATGA 59.162 34.615 17.17 3.25 40.29 3.07
327 328 7.053316 TGTTTCCCATGATTATTAAGGCATG 57.947 36.000 0.00 11.97 38.22 4.06
328 329 6.840705 ACTGTTTCCCATGATTATTAAGGCAT 59.159 34.615 0.00 0.00 0.00 4.40
329 330 6.194235 ACTGTTTCCCATGATTATTAAGGCA 58.806 36.000 0.00 0.00 0.00 4.75
330 331 6.715347 ACTGTTTCCCATGATTATTAAGGC 57.285 37.500 0.00 0.00 0.00 4.35
331 332 8.190784 GTCAACTGTTTCCCATGATTATTAAGG 58.809 37.037 0.00 0.00 0.00 2.69
332 333 7.910162 CGTCAACTGTTTCCCATGATTATTAAG 59.090 37.037 0.00 0.00 0.00 1.85
333 334 7.608376 TCGTCAACTGTTTCCCATGATTATTAA 59.392 33.333 0.00 0.00 0.00 1.40
334 335 7.106890 TCGTCAACTGTTTCCCATGATTATTA 58.893 34.615 0.00 0.00 0.00 0.98
335 336 5.943416 TCGTCAACTGTTTCCCATGATTATT 59.057 36.000 0.00 0.00 0.00 1.40
336 337 5.496556 TCGTCAACTGTTTCCCATGATTAT 58.503 37.500 0.00 0.00 0.00 1.28
337 338 4.900684 TCGTCAACTGTTTCCCATGATTA 58.099 39.130 0.00 0.00 0.00 1.75
338 339 3.750371 TCGTCAACTGTTTCCCATGATT 58.250 40.909 0.00 0.00 0.00 2.57
339 340 3.417069 TCGTCAACTGTTTCCCATGAT 57.583 42.857 0.00 0.00 0.00 2.45
340 341 2.920724 TCGTCAACTGTTTCCCATGA 57.079 45.000 0.00 0.00 0.00 3.07
341 342 5.586243 AGATTATCGTCAACTGTTTCCCATG 59.414 40.000 0.00 0.00 0.00 3.66
342 343 5.745227 AGATTATCGTCAACTGTTTCCCAT 58.255 37.500 0.00 0.00 0.00 4.00
343 344 5.160607 AGATTATCGTCAACTGTTTCCCA 57.839 39.130 0.00 0.00 0.00 4.37
344 345 5.175859 TGAGATTATCGTCAACTGTTTCCC 58.824 41.667 0.00 0.00 0.00 3.97
345 346 6.535150 TCATGAGATTATCGTCAACTGTTTCC 59.465 38.462 0.00 0.00 0.00 3.13
346 347 7.525688 TCATGAGATTATCGTCAACTGTTTC 57.474 36.000 0.00 0.00 0.00 2.78
347 348 6.036517 GCTCATGAGATTATCGTCAACTGTTT 59.963 38.462 27.04 0.00 0.00 2.83
348 349 5.521735 GCTCATGAGATTATCGTCAACTGTT 59.478 40.000 27.04 0.00 0.00 3.16
349 350 5.046529 GCTCATGAGATTATCGTCAACTGT 58.953 41.667 27.04 0.00 0.00 3.55
350 351 4.447054 GGCTCATGAGATTATCGTCAACTG 59.553 45.833 27.04 0.00 0.00 3.16
351 352 4.343526 AGGCTCATGAGATTATCGTCAACT 59.656 41.667 27.04 3.38 0.00 3.16
352 353 4.626042 AGGCTCATGAGATTATCGTCAAC 58.374 43.478 27.04 3.54 0.00 3.18
353 354 4.944619 AGGCTCATGAGATTATCGTCAA 57.055 40.909 27.04 0.00 0.00 3.18
354 355 6.596309 AATAGGCTCATGAGATTATCGTCA 57.404 37.500 27.04 0.58 0.00 4.35
355 356 6.870965 ACAAATAGGCTCATGAGATTATCGTC 59.129 38.462 27.04 5.55 0.00 4.20
356 357 6.648310 CACAAATAGGCTCATGAGATTATCGT 59.352 38.462 27.04 17.18 0.00 3.73
357 358 6.648310 ACACAAATAGGCTCATGAGATTATCG 59.352 38.462 27.04 16.66 0.00 2.92
358 359 7.976135 ACACAAATAGGCTCATGAGATTATC 57.024 36.000 27.04 7.81 0.00 1.75
359 360 8.432013 TGTACACAAATAGGCTCATGAGATTAT 58.568 33.333 27.04 17.91 0.00 1.28
360 361 7.791029 TGTACACAAATAGGCTCATGAGATTA 58.209 34.615 27.04 16.51 0.00 1.75
361 362 6.653020 TGTACACAAATAGGCTCATGAGATT 58.347 36.000 27.04 13.94 0.00 2.40
362 363 6.239217 TGTACACAAATAGGCTCATGAGAT 57.761 37.500 27.04 15.64 0.00 2.75
363 364 5.675684 TGTACACAAATAGGCTCATGAGA 57.324 39.130 27.04 5.94 0.00 3.27
364 365 6.932356 ATTGTACACAAATAGGCTCATGAG 57.068 37.500 18.84 18.84 39.55 2.90
365 366 7.176515 ACAAATTGTACACAAATAGGCTCATGA 59.823 33.333 0.00 0.00 39.55 3.07
366 367 7.315142 ACAAATTGTACACAAATAGGCTCATG 58.685 34.615 0.00 0.00 39.55 3.07
367 368 7.362920 GGACAAATTGTACACAAATAGGCTCAT 60.363 37.037 2.98 0.00 39.55 2.90
368 369 6.072175 GGACAAATTGTACACAAATAGGCTCA 60.072 38.462 2.98 0.00 39.55 4.26
369 370 6.072175 TGGACAAATTGTACACAAATAGGCTC 60.072 38.462 6.99 0.00 36.02 4.70
370 371 5.772672 TGGACAAATTGTACACAAATAGGCT 59.227 36.000 6.99 0.00 36.02 4.58
371 372 6.019779 TGGACAAATTGTACACAAATAGGC 57.980 37.500 6.99 0.00 36.02 3.93
380 381 7.399191 AGGACTAGATAGTGGACAAATTGTACA 59.601 37.037 6.99 6.99 39.27 2.90
381 382 7.783042 AGGACTAGATAGTGGACAAATTGTAC 58.217 38.462 0.42 0.42 36.50 2.90
382 383 7.973048 AGGACTAGATAGTGGACAAATTGTA 57.027 36.000 0.00 0.00 36.50 2.41
383 384 6.875972 AGGACTAGATAGTGGACAAATTGT 57.124 37.500 0.00 0.00 36.50 2.71
384 385 8.012957 ACTAGGACTAGATAGTGGACAAATTG 57.987 38.462 13.00 0.00 36.50 2.32
385 386 7.839705 TGACTAGGACTAGATAGTGGACAAATT 59.160 37.037 13.00 0.00 36.50 1.82
386 387 7.355101 TGACTAGGACTAGATAGTGGACAAAT 58.645 38.462 13.00 0.00 36.50 2.32
387 388 6.728411 TGACTAGGACTAGATAGTGGACAAA 58.272 40.000 13.00 0.00 36.50 2.83
388 389 6.323210 TGACTAGGACTAGATAGTGGACAA 57.677 41.667 13.00 0.00 36.50 3.18
389 390 5.970501 TGACTAGGACTAGATAGTGGACA 57.029 43.478 13.00 0.00 36.50 4.02
390 391 6.300703 ACATGACTAGGACTAGATAGTGGAC 58.699 44.000 13.00 0.00 36.50 4.02
391 392 6.517013 ACATGACTAGGACTAGATAGTGGA 57.483 41.667 13.00 0.00 36.50 4.02
392 393 8.735315 CATTACATGACTAGGACTAGATAGTGG 58.265 40.741 13.00 1.07 36.50 4.00
393 394 9.290988 ACATTACATGACTAGGACTAGATAGTG 57.709 37.037 13.00 8.24 36.50 2.74
394 395 9.509956 GACATTACATGACTAGGACTAGATAGT 57.490 37.037 13.00 1.66 39.71 2.12
395 396 9.733556 AGACATTACATGACTAGGACTAGATAG 57.266 37.037 13.00 0.00 36.97 2.08
397 398 9.733556 CTAGACATTACATGACTAGGACTAGAT 57.266 37.037 13.00 0.00 45.48 1.98
478 479 2.940158 ACGGGATAAATACAAAGGGGC 58.060 47.619 0.00 0.00 0.00 5.80
731 734 4.154347 CGTCCAGAGGGAGCTGCC 62.154 72.222 18.04 18.04 46.12 4.85
734 737 4.704103 TGGCGTCCAGAGGGAGCT 62.704 66.667 0.00 0.00 46.12 4.09
794 843 4.021925 GGCTGGACTTGCGGGAGT 62.022 66.667 0.00 0.00 0.00 3.85
861 927 1.260544 GCCCCAAAATCAGCAGACTT 58.739 50.000 0.00 0.00 0.00 3.01
862 928 0.613012 GGCCCCAAAATCAGCAGACT 60.613 55.000 0.00 0.00 0.00 3.24
864 930 1.305213 GGGCCCCAAAATCAGCAGA 60.305 57.895 12.23 0.00 0.00 4.26
865 931 2.361567 GGGGCCCCAAAATCAGCAG 61.362 63.158 37.61 0.00 35.81 4.24
866 932 2.284552 GGGGCCCCAAAATCAGCA 60.285 61.111 37.61 0.00 35.81 4.41
868 934 2.759560 CCGGGGCCCCAAAATCAG 60.760 66.667 40.06 21.63 35.37 2.90
871 937 3.272847 AGACCGGGGCCCCAAAAT 61.273 61.111 40.06 21.97 35.37 1.82
872 938 3.974293 GAGACCGGGGCCCCAAAA 61.974 66.667 40.06 0.00 35.37 2.44
901 1121 3.934391 GAAGCGGAGGACCACACGG 62.934 68.421 0.00 0.00 35.59 4.94
902 1122 2.432628 GAAGCGGAGGACCACACG 60.433 66.667 0.00 0.00 35.59 4.49
903 1123 2.047179 GGAAGCGGAGGACCACAC 60.047 66.667 0.00 0.00 35.59 3.82
904 1124 3.691342 CGGAAGCGGAGGACCACA 61.691 66.667 0.00 0.00 35.59 4.17
923 1143 4.767255 GAGACCTGTGCGGGGCTG 62.767 72.222 10.68 0.00 46.32 4.85
968 1270 0.108615 AGACCCGAAATCAGCAGACG 60.109 55.000 0.00 0.00 0.00 4.18
969 1271 1.205893 AGAGACCCGAAATCAGCAGAC 59.794 52.381 0.00 0.00 0.00 3.51
1477 1791 5.068234 TGACGAACCACAGAAAGGTATAG 57.932 43.478 0.00 0.00 38.76 1.31
1638 1952 0.832030 CGTAGACGCGATGAAACTCG 59.168 55.000 15.93 2.51 41.54 4.18
1797 2111 2.202810 GTAGCGAGCACAGAGGGC 60.203 66.667 0.00 0.00 0.00 5.19
2330 2653 2.743664 CGAGGAACATGAGCAACATCAA 59.256 45.455 0.00 0.00 37.07 2.57
3168 3491 3.432749 GCTGAAGGTTGATGAGATAGGCA 60.433 47.826 0.00 0.00 0.00 4.75
3440 3770 1.128809 TGGGCGTGGGTAGAAAGGAA 61.129 55.000 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.