Multiple sequence alignment - TraesCS5D01G101500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G101500 chr5D 100.000 4896 0 0 1 4896 114389099 114384204 0.000000e+00 9042
1 TraesCS5D01G101500 chr5D 89.867 375 34 4 4522 4895 61712940 61712569 3.430000e-131 479
2 TraesCS5D01G101500 chr5A 93.794 3577 132 35 770 4307 119575153 119571628 0.000000e+00 5293
3 TraesCS5D01G101500 chr5A 95.200 375 16 2 4522 4896 463465227 463464855 4.220000e-165 592
4 TraesCS5D01G101500 chr5A 87.562 402 13 11 382 756 119575886 119575495 9.740000e-117 431
5 TraesCS5D01G101500 chr5A 84.000 250 33 3 38 283 403996865 403996619 2.950000e-57 233
6 TraesCS5D01G101500 chr5A 92.771 83 3 2 306 385 119577130 119577048 3.100000e-22 117
7 TraesCS5D01G101500 chr5B 93.444 1632 79 16 1423 3046 125276321 125274710 0.000000e+00 2396
8 TraesCS5D01G101500 chr5B 93.783 1496 66 14 3046 4521 125272229 125270741 0.000000e+00 2222
9 TraesCS5D01G101500 chr5B 96.440 646 17 5 701 1341 125278269 125277625 0.000000e+00 1061
10 TraesCS5D01G101500 chr5B 82.147 773 56 35 1 710 125279844 125279091 5.460000e-164 588
11 TraesCS5D01G101500 chr2B 95.491 377 9 4 4522 4896 275317974 275318344 3.260000e-166 595
12 TraesCS5D01G101500 chr2B 84.000 250 33 4 38 283 84921330 84921084 2.950000e-57 233
13 TraesCS5D01G101500 chr2B 82.836 268 29 13 16 279 101416765 101416511 1.770000e-54 224
14 TraesCS5D01G101500 chr2B 83.550 231 31 6 16 242 101430665 101430438 4.970000e-50 209
15 TraesCS5D01G101500 chr4D 93.899 377 15 3 4522 4896 214766736 214766366 3.310000e-156 562
16 TraesCS5D01G101500 chr4B 93.369 377 18 6 4522 4896 500745084 500744713 7.160000e-153 551
17 TraesCS5D01G101500 chr4B 83.945 218 31 2 16 232 448562518 448562304 6.420000e-49 206
18 TraesCS5D01G101500 chr1B 92.876 379 23 4 4522 4896 550759413 550759035 9.270000e-152 547
19 TraesCS5D01G101500 chr6B 91.512 377 25 3 4522 4896 213535001 213534630 3.380000e-141 512
20 TraesCS5D01G101500 chr6D 90.741 378 31 3 4522 4896 385218873 385219249 7.320000e-138 501
21 TraesCS5D01G101500 chr2D 90.716 377 30 4 4522 4895 446231599 446231225 9.460000e-137 497
22 TraesCS5D01G101500 chr6A 84.000 275 32 8 16 283 574915815 574915546 2.260000e-63 254
23 TraesCS5D01G101500 chr7B 83.154 279 36 8 16 287 46811896 46811622 1.360000e-60 244
24 TraesCS5D01G101500 chr4A 82.014 278 32 10 18 280 308664543 308664817 2.290000e-53 220
25 TraesCS5D01G101500 chr1A 85.388 219 24 7 16 233 585208931 585209142 2.290000e-53 220


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G101500 chr5D 114384204 114389099 4895 True 9042.00 9042 100.000000 1 4896 1 chr5D.!!$R2 4895
1 TraesCS5D01G101500 chr5A 119571628 119577130 5502 True 1947.00 5293 91.375667 306 4307 3 chr5A.!!$R3 4001
2 TraesCS5D01G101500 chr5B 125270741 125279844 9103 True 1566.75 2396 91.453500 1 4521 4 chr5B.!!$R1 4520

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
631 1869 0.100682 ACGCCATCTACAGTGTAGCG 59.899 55.000 24.65 24.65 46.88 4.26 F
1363 3768 0.694444 TACATTCCTCCTGCTCCCCC 60.694 60.000 0.00 0.00 0.00 5.40 F
1388 3793 0.904649 ACTCGGCATTCTCACATCCA 59.095 50.000 0.00 0.00 0.00 3.41 F
1434 5085 1.269723 ACTCAGAGCATTGTTCGTCGA 59.730 47.619 0.00 0.00 0.00 4.20 F
2921 6593 0.959553 TGTCGTGGGTTCTCTCTGTC 59.040 55.000 0.00 0.00 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2374 6040 1.066573 ACACCACTGTAGCATGAGAGC 60.067 52.381 0.00 0.0 0.00 4.09 R
2768 6440 0.107848 CCACCGTCGAAATAGGGCTT 60.108 55.000 0.00 0.0 0.00 4.35 R
2813 6485 1.353694 AGCTGGGAAAGAATGACTGCT 59.646 47.619 0.00 0.0 0.00 4.24 R
3406 9562 0.911045 TTCCTCCTGCTGGCATCTGA 60.911 55.000 4.42 0.0 0.00 3.27 R
4713 10899 0.034896 TTCTTCACGAAGGCCCAGAC 59.965 55.000 0.00 0.0 38.88 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 0.667993 CATGCGGTGAGTGTTTGGTT 59.332 50.000 0.00 0.00 0.00 3.67
24 25 0.951558 ATGCGGTGAGTGTTTGGTTC 59.048 50.000 0.00 0.00 0.00 3.62
25 26 0.107410 TGCGGTGAGTGTTTGGTTCT 60.107 50.000 0.00 0.00 0.00 3.01
27 28 2.215196 GCGGTGAGTGTTTGGTTCTAA 58.785 47.619 0.00 0.00 0.00 2.10
28 29 2.223377 GCGGTGAGTGTTTGGTTCTAAG 59.777 50.000 0.00 0.00 0.00 2.18
30 31 3.211045 GGTGAGTGTTTGGTTCTAAGCA 58.789 45.455 0.00 0.00 34.10 3.91
35 36 4.270008 AGTGTTTGGTTCTAAGCACAACT 58.730 39.130 15.15 8.40 42.13 3.16
36 37 4.705023 AGTGTTTGGTTCTAAGCACAACTT 59.295 37.500 15.15 0.00 42.13 2.66
37 38 4.798387 GTGTTTGGTTCTAAGCACAACTTG 59.202 41.667 9.93 0.00 40.25 3.16
50 51 0.175302 CAACTTGCCACACTTTGCCA 59.825 50.000 0.00 0.00 0.00 4.92
68 69 2.808543 GCCACACCTCAACTTAGACAAG 59.191 50.000 0.00 0.00 37.81 3.16
97 98 2.252714 AGTTGGGTGTGTGTTTGGTTT 58.747 42.857 0.00 0.00 0.00 3.27
157 159 5.012046 CAGTAAGCCCCACATGTCATAGATA 59.988 44.000 0.00 0.00 0.00 1.98
166 168 7.420002 CCCACATGTCATAGATACAAAATGTG 58.580 38.462 0.00 0.00 36.12 3.21
169 171 6.316140 ACATGTCATAGATACAAAATGTGCGT 59.684 34.615 0.00 0.00 0.00 5.24
177 179 6.546395 AGATACAAAATGTGCGTCAAGATTC 58.454 36.000 0.00 0.00 0.00 2.52
178 180 3.900941 ACAAAATGTGCGTCAAGATTCC 58.099 40.909 0.00 0.00 0.00 3.01
179 181 3.244976 CAAAATGTGCGTCAAGATTCCC 58.755 45.455 0.00 0.00 0.00 3.97
194 196 2.390225 TTCCCTTAGGCAAGCCAAAA 57.610 45.000 14.40 6.31 38.92 2.44
196 198 2.178580 TCCCTTAGGCAAGCCAAAATG 58.821 47.619 14.40 4.48 38.92 2.32
222 225 9.076596 GTGGTTAATAATTTGATCAACTCAAGC 57.923 33.333 7.89 7.05 44.48 4.01
231 234 0.106708 TCAACTCAAGCGAGGCAAGT 59.893 50.000 0.00 0.00 44.17 3.16
232 235 0.236711 CAACTCAAGCGAGGCAAGTG 59.763 55.000 0.00 0.00 44.17 3.16
233 236 1.510480 AACTCAAGCGAGGCAAGTGC 61.510 55.000 0.00 0.00 44.17 4.40
234 237 1.962822 CTCAAGCGAGGCAAGTGCA 60.963 57.895 5.52 0.00 44.36 4.57
235 238 1.509644 CTCAAGCGAGGCAAGTGCAA 61.510 55.000 5.52 0.00 44.36 4.08
236 239 1.100463 TCAAGCGAGGCAAGTGCAAA 61.100 50.000 5.52 0.00 44.36 3.68
237 240 0.248990 CAAGCGAGGCAAGTGCAAAA 60.249 50.000 5.52 0.00 44.36 2.44
238 241 0.675633 AAGCGAGGCAAGTGCAAAAT 59.324 45.000 5.52 0.00 44.36 1.82
239 242 1.533625 AGCGAGGCAAGTGCAAAATA 58.466 45.000 5.52 0.00 44.36 1.40
240 243 1.470098 AGCGAGGCAAGTGCAAAATAG 59.530 47.619 5.52 0.00 44.36 1.73
241 244 1.200020 GCGAGGCAAGTGCAAAATAGT 59.800 47.619 5.52 0.00 44.36 2.12
245 248 3.221771 AGGCAAGTGCAAAATAGTGTGA 58.778 40.909 5.52 0.00 44.36 3.58
265 268 5.372343 TGACAATATGTGGCAAGGATAGT 57.628 39.130 0.00 0.00 44.65 2.12
267 270 5.104569 TGACAATATGTGGCAAGGATAGTCA 60.105 40.000 6.86 6.86 44.65 3.41
281 284 3.378427 GGATAGTCACAATCCAAACAGGC 59.622 47.826 0.00 0.00 42.21 4.85
352 376 6.769512 TCCTGCTGTCAAAAGAAACTAGTAT 58.230 36.000 0.00 0.00 0.00 2.12
406 1595 8.463930 TTTATGGGCTTAAAATGGTCATCTAG 57.536 34.615 0.00 0.00 0.00 2.43
549 1743 4.641645 CCCCACAAGGCACGAGCA 62.642 66.667 7.26 0.00 44.61 4.26
631 1869 0.100682 ACGCCATCTACAGTGTAGCG 59.899 55.000 24.65 24.65 46.88 4.26
716 2785 2.686405 CCATGGTAGTCGTAGTACTGCA 59.314 50.000 11.70 0.00 34.15 4.41
908 3311 3.503748 CACCACCTCCAAGAAAATCACTC 59.496 47.826 0.00 0.00 0.00 3.51
1284 3689 4.697756 CTCAACGCCGGCCTTGGA 62.698 66.667 29.84 16.85 0.00 3.53
1352 3757 5.839606 GGTCAGTAACCTCCTATACATTCCT 59.160 44.000 0.00 0.00 45.45 3.36
1353 3758 6.015265 GGTCAGTAACCTCCTATACATTCCTC 60.015 46.154 0.00 0.00 45.45 3.71
1354 3759 6.015265 GTCAGTAACCTCCTATACATTCCTCC 60.015 46.154 0.00 0.00 0.00 4.30
1355 3760 6.078664 CAGTAACCTCCTATACATTCCTCCT 58.921 44.000 0.00 0.00 0.00 3.69
1356 3761 6.015010 CAGTAACCTCCTATACATTCCTCCTG 60.015 46.154 0.00 0.00 0.00 3.86
1357 3762 3.243724 ACCTCCTATACATTCCTCCTGC 58.756 50.000 0.00 0.00 0.00 4.85
1358 3763 3.116551 ACCTCCTATACATTCCTCCTGCT 60.117 47.826 0.00 0.00 0.00 4.24
1359 3764 3.513515 CCTCCTATACATTCCTCCTGCTC 59.486 52.174 0.00 0.00 0.00 4.26
1360 3765 3.511477 TCCTATACATTCCTCCTGCTCC 58.489 50.000 0.00 0.00 0.00 4.70
1361 3766 2.569404 CCTATACATTCCTCCTGCTCCC 59.431 54.545 0.00 0.00 0.00 4.30
1362 3767 1.439543 ATACATTCCTCCTGCTCCCC 58.560 55.000 0.00 0.00 0.00 4.81
1363 3768 0.694444 TACATTCCTCCTGCTCCCCC 60.694 60.000 0.00 0.00 0.00 5.40
1364 3769 1.695597 CATTCCTCCTGCTCCCCCT 60.696 63.158 0.00 0.00 0.00 4.79
1365 3770 1.385206 ATTCCTCCTGCTCCCCCTC 60.385 63.158 0.00 0.00 0.00 4.30
1366 3771 2.923852 ATTCCTCCTGCTCCCCCTCC 62.924 65.000 0.00 0.00 0.00 4.30
1388 3793 0.904649 ACTCGGCATTCTCACATCCA 59.095 50.000 0.00 0.00 0.00 3.41
1412 3817 3.333219 CAGCAAGCCCTCCCCTCA 61.333 66.667 0.00 0.00 0.00 3.86
1413 3818 3.013932 AGCAAGCCCTCCCCTCAG 61.014 66.667 0.00 0.00 0.00 3.35
1414 3819 3.011517 GCAAGCCCTCCCCTCAGA 61.012 66.667 0.00 0.00 0.00 3.27
1416 3821 1.614824 CAAGCCCTCCCCTCAGACT 60.615 63.158 0.00 0.00 0.00 3.24
1418 3823 2.039624 GCCCTCCCCTCAGACTCA 59.960 66.667 0.00 0.00 0.00 3.41
1434 5085 1.269723 ACTCAGAGCATTGTTCGTCGA 59.730 47.619 0.00 0.00 0.00 4.20
1457 5109 4.358214 TCCCCCTTTTCAACTTTCTTGTT 58.642 39.130 0.00 0.00 0.00 2.83
1475 5127 8.422973 TTCTTGTTCTGGATTTCATTTTTGTG 57.577 30.769 0.00 0.00 0.00 3.33
1532 5184 3.356529 AGATTGGTCAGATTGGTGGAC 57.643 47.619 0.00 0.00 0.00 4.02
1539 5191 2.415512 GTCAGATTGGTGGACGCTTTAC 59.584 50.000 0.00 0.00 0.00 2.01
1556 5208 5.138095 GCTTTACGTTCAGTGCTAAAGTTC 58.862 41.667 0.00 0.00 31.73 3.01
1569 5221 8.583765 CAGTGCTAAAGTTCTACAAAACAAAAC 58.416 33.333 0.00 0.00 0.00 2.43
1570 5222 8.520351 AGTGCTAAAGTTCTACAAAACAAAACT 58.480 29.630 0.00 0.00 0.00 2.66
1571 5223 8.795341 GTGCTAAAGTTCTACAAAACAAAACTC 58.205 33.333 0.00 0.00 30.23 3.01
1573 5225 9.349145 GCTAAAGTTCTACAAAACAAAACTCAA 57.651 29.630 0.00 0.00 30.23 3.02
1586 5238 6.203808 ACAAAACTCAAGGGTAACAAGTTC 57.796 37.500 0.00 0.00 39.74 3.01
1644 5296 7.719778 TTGTTGCAGCTTGTATATATGAGAG 57.280 36.000 1.17 0.00 0.00 3.20
1775 5427 9.535878 GATTTTACATCTTACTGAGTCCTAAGG 57.464 37.037 0.00 0.00 0.00 2.69
1886 5551 8.101510 CAGTGCGCAAAATATATGTTAAACAAC 58.898 33.333 14.00 0.00 0.00 3.32
1907 5572 6.874134 ACAACATCCTAACATGACACTAGAAC 59.126 38.462 0.00 0.00 0.00 3.01
1914 5579 6.918569 CCTAACATGACACTAGAACGATAAGG 59.081 42.308 0.00 0.00 0.00 2.69
1915 5580 6.525578 AACATGACACTAGAACGATAAGGA 57.474 37.500 0.00 0.00 0.00 3.36
1921 5586 7.872881 TGACACTAGAACGATAAGGACATATC 58.127 38.462 0.00 0.00 0.00 1.63
1946 5611 6.883217 CCCAATCCTAACATATGGATCTCTTG 59.117 42.308 7.80 4.36 41.76 3.02
2255 5921 9.444600 TGTAGCTTAACGGAAGAATCTTTTAAT 57.555 29.630 0.00 0.00 37.33 1.40
2319 5985 7.254692 CCAGCTTAATGTACAATCACTCTCATG 60.255 40.741 0.00 0.00 0.00 3.07
2367 6033 9.090692 GTAGAAATGACTGCTTAACGGTTATAA 57.909 33.333 0.73 0.00 38.28 0.98
2374 6040 7.380333 TGACTGCTTAACGGTTATAACATATCG 59.620 37.037 17.16 12.96 38.28 2.92
2506 6172 4.460263 TGCCTATTGTTATACCAAGCTGG 58.540 43.478 0.00 0.00 45.02 4.85
2579 6246 6.573664 TGATGATGACTGGAAATTCGTTTT 57.426 33.333 0.00 0.00 0.00 2.43
2580 6247 6.380995 TGATGATGACTGGAAATTCGTTTTG 58.619 36.000 0.00 0.00 0.00 2.44
2582 6249 6.869315 TGATGACTGGAAATTCGTTTTGTA 57.131 33.333 0.00 0.00 0.00 2.41
2584 6251 5.682943 TGACTGGAAATTCGTTTTGTAGG 57.317 39.130 0.00 0.00 0.00 3.18
2585 6252 5.369833 TGACTGGAAATTCGTTTTGTAGGA 58.630 37.500 0.00 0.00 0.00 2.94
2586 6253 5.237779 TGACTGGAAATTCGTTTTGTAGGAC 59.762 40.000 0.00 0.00 0.00 3.85
2588 6255 3.499157 TGGAAATTCGTTTTGTAGGACGG 59.501 43.478 0.00 0.00 39.59 4.79
2598 6265 5.396484 GTTTTGTAGGACGGAAAATTAGCC 58.604 41.667 0.00 0.00 0.00 3.93
2619 6291 5.361285 AGCCGAGTTACTGATTTCTATCTGT 59.639 40.000 0.00 0.00 43.05 3.41
2620 6292 6.043411 GCCGAGTTACTGATTTCTATCTGTT 58.957 40.000 0.00 0.00 41.47 3.16
2621 6293 6.535508 GCCGAGTTACTGATTTCTATCTGTTT 59.464 38.462 0.00 0.00 41.47 2.83
2622 6294 7.705325 GCCGAGTTACTGATTTCTATCTGTTTA 59.295 37.037 0.00 0.00 41.47 2.01
2729 6401 3.526899 TGTTGGAGGGGAGACTATGAAA 58.473 45.455 0.00 0.00 0.00 2.69
2768 6440 2.848032 GGCCCCCTTTGTACACCA 59.152 61.111 0.00 0.00 0.00 4.17
2813 6485 6.442564 AGTGGTACTTGGTATTCACATCCTTA 59.557 38.462 0.00 0.00 32.12 2.69
2921 6593 0.959553 TGTCGTGGGTTCTCTCTGTC 59.040 55.000 0.00 0.00 0.00 3.51
2984 6656 2.426522 TCCACTTCTTTTGGCTCATCG 58.573 47.619 0.00 0.00 33.71 3.84
2985 6657 2.154462 CCACTTCTTTTGGCTCATCGT 58.846 47.619 0.00 0.00 0.00 3.73
3142 9295 6.857777 TGGTGGCTTCATTTGTTTTATTTG 57.142 33.333 0.00 0.00 0.00 2.32
3145 9298 7.718753 TGGTGGCTTCATTTGTTTTATTTGAAT 59.281 29.630 0.00 0.00 0.00 2.57
3345 9498 3.640498 ACTCATCATCATCATCCTGTCGT 59.360 43.478 0.00 0.00 0.00 4.34
3359 9515 4.637276 TCCTGTCGTGATGCTTTTCTTTA 58.363 39.130 0.00 0.00 0.00 1.85
3406 9562 0.958822 GTTGTTCTTTCCCATGCCGT 59.041 50.000 0.00 0.00 0.00 5.68
3416 9572 2.184830 CCATGCCGTCAGATGCCAG 61.185 63.158 0.00 0.00 0.00 4.85
3424 9580 1.306397 TCAGATGCCAGCAGGAGGA 60.306 57.895 0.00 0.00 36.89 3.71
3436 9592 1.306141 AGGAGGAATCCTGACCGCA 60.306 57.895 6.50 0.00 38.98 5.69
3610 9766 1.606601 CTCAGTCTGGGTCCGGTCA 60.607 63.158 0.00 0.00 0.00 4.02
3781 9937 4.097418 AGAGGTTCAGCTACAGTTGGTAT 58.903 43.478 0.00 0.00 0.00 2.73
3901 10057 0.329261 TCAAGCCCAACTAGCATGCT 59.671 50.000 25.99 25.99 0.00 3.79
3962 10118 4.841443 TGCTTCTTATATTGCATGCCTG 57.159 40.909 16.68 0.00 0.00 4.85
4106 10269 5.178797 CCTGATGAAGGTCGAATGTAACTT 58.821 41.667 0.00 0.00 41.74 2.66
4241 10424 5.528043 AAACACAGGTTTGCATGTCATTA 57.472 34.783 0.00 0.00 45.22 1.90
4255 10438 6.875726 TGCATGTCATTAGCACTTATATCCTC 59.124 38.462 0.00 0.00 32.55 3.71
4398 10581 4.858850 AGGCATCCAAACTATCAATGACA 58.141 39.130 0.00 0.00 0.00 3.58
4430 10613 8.534333 TTAACTAAAGAAGCACTCAGTGTATG 57.466 34.615 6.68 0.00 35.75 2.39
4439 10622 7.448469 AGAAGCACTCAGTGTATGGTTTTTAAT 59.552 33.333 6.68 0.00 34.37 1.40
4496 10682 9.657121 AAAACATTAAACAAAATGCAAATACGG 57.343 25.926 0.00 0.00 39.93 4.02
4521 10707 6.183360 GCCGAGCTTTTATTTATACAAGGTGT 60.183 38.462 5.38 0.00 32.73 4.16
4522 10708 7.186804 CCGAGCTTTTATTTATACAAGGTGTG 58.813 38.462 5.38 0.08 32.73 3.82
4523 10709 7.148306 CCGAGCTTTTATTTATACAAGGTGTGT 60.148 37.037 5.38 0.00 44.82 3.72
4524 10710 8.234546 CGAGCTTTTATTTATACAAGGTGTGTT 58.765 33.333 5.38 0.00 41.98 3.32
4527 10713 9.783256 GCTTTTATTTATACAAGGTGTGTTAGG 57.217 33.333 0.00 0.00 41.98 2.69
4532 10718 7.837202 TTTATACAAGGTGTGTTAGGAATCG 57.163 36.000 0.00 0.00 41.98 3.34
4533 10719 2.423577 ACAAGGTGTGTTAGGAATCGC 58.576 47.619 0.00 0.00 37.01 4.58
4534 10720 2.224426 ACAAGGTGTGTTAGGAATCGCA 60.224 45.455 0.00 0.00 37.01 5.10
4535 10721 2.811431 CAAGGTGTGTTAGGAATCGCAA 59.189 45.455 0.00 0.00 0.00 4.85
4536 10722 2.423577 AGGTGTGTTAGGAATCGCAAC 58.576 47.619 0.00 0.00 32.74 4.17
4537 10723 2.038557 AGGTGTGTTAGGAATCGCAACT 59.961 45.455 0.00 0.00 37.30 3.16
4538 10724 2.812011 GGTGTGTTAGGAATCGCAACTT 59.188 45.455 0.00 0.00 0.00 2.66
4539 10725 3.998341 GGTGTGTTAGGAATCGCAACTTA 59.002 43.478 0.00 0.00 0.00 2.24
4540 10726 4.092968 GGTGTGTTAGGAATCGCAACTTAG 59.907 45.833 0.00 0.00 0.00 2.18
4541 10727 4.689345 GTGTGTTAGGAATCGCAACTTAGT 59.311 41.667 0.00 0.00 0.00 2.24
4542 10728 5.865552 GTGTGTTAGGAATCGCAACTTAGTA 59.134 40.000 0.00 0.00 0.00 1.82
4543 10729 6.534079 GTGTGTTAGGAATCGCAACTTAGTAT 59.466 38.462 0.00 0.00 0.00 2.12
4544 10730 7.064253 GTGTGTTAGGAATCGCAACTTAGTATT 59.936 37.037 0.00 0.00 0.00 1.89
4545 10731 8.252417 TGTGTTAGGAATCGCAACTTAGTATTA 58.748 33.333 0.00 0.00 0.00 0.98
4546 10732 9.257651 GTGTTAGGAATCGCAACTTAGTATTAT 57.742 33.333 0.00 0.00 0.00 1.28
4547 10733 9.472361 TGTTAGGAATCGCAACTTAGTATTATC 57.528 33.333 0.00 0.00 0.00 1.75
4548 10734 9.694137 GTTAGGAATCGCAACTTAGTATTATCT 57.306 33.333 0.00 0.00 0.00 1.98
4549 10735 9.909644 TTAGGAATCGCAACTTAGTATTATCTC 57.090 33.333 0.00 0.00 0.00 2.75
4550 10736 7.952671 AGGAATCGCAACTTAGTATTATCTCA 58.047 34.615 0.00 0.00 0.00 3.27
4551 10737 8.421784 AGGAATCGCAACTTAGTATTATCTCAA 58.578 33.333 0.00 0.00 0.00 3.02
4552 10738 8.704234 GGAATCGCAACTTAGTATTATCTCAAG 58.296 37.037 0.00 0.00 0.00 3.02
4553 10739 8.594881 AATCGCAACTTAGTATTATCTCAAGG 57.405 34.615 0.00 0.00 0.00 3.61
4554 10740 5.983720 TCGCAACTTAGTATTATCTCAAGGC 59.016 40.000 0.00 0.00 0.00 4.35
4555 10741 5.177696 CGCAACTTAGTATTATCTCAAGGCC 59.822 44.000 0.00 0.00 0.00 5.19
4556 10742 6.055588 GCAACTTAGTATTATCTCAAGGCCA 58.944 40.000 5.01 0.00 0.00 5.36
4557 10743 6.542370 GCAACTTAGTATTATCTCAAGGCCAA 59.458 38.462 5.01 0.00 0.00 4.52
4558 10744 7.067008 GCAACTTAGTATTATCTCAAGGCCAAA 59.933 37.037 5.01 0.00 0.00 3.28
4559 10745 8.616076 CAACTTAGTATTATCTCAAGGCCAAAG 58.384 37.037 5.01 0.00 0.00 2.77
4560 10746 6.768381 ACTTAGTATTATCTCAAGGCCAAAGC 59.232 38.462 5.01 0.00 38.76 3.51
4576 10762 6.824305 GCCAAAGCCATCATATATACAAGT 57.176 37.500 0.00 0.00 0.00 3.16
4577 10763 7.921786 GCCAAAGCCATCATATATACAAGTA 57.078 36.000 0.00 0.00 0.00 2.24
4578 10764 7.752695 GCCAAAGCCATCATATATACAAGTAC 58.247 38.462 0.00 0.00 0.00 2.73
4579 10765 7.390440 GCCAAAGCCATCATATATACAAGTACA 59.610 37.037 0.00 0.00 0.00 2.90
4580 10766 8.939929 CCAAAGCCATCATATATACAAGTACAG 58.060 37.037 0.00 0.00 0.00 2.74
4581 10767 8.939929 CAAAGCCATCATATATACAAGTACAGG 58.060 37.037 0.00 0.00 0.00 4.00
4582 10768 7.187824 AGCCATCATATATACAAGTACAGGG 57.812 40.000 0.00 0.00 0.00 4.45
4583 10769 6.156949 AGCCATCATATATACAAGTACAGGGG 59.843 42.308 0.00 0.00 0.00 4.79
4584 10770 6.632672 GCCATCATATATACAAGTACAGGGGG 60.633 46.154 0.00 0.00 0.00 5.40
4585 10771 6.672218 CCATCATATATACAAGTACAGGGGGA 59.328 42.308 0.00 0.00 0.00 4.81
4586 10772 7.147655 CCATCATATATACAAGTACAGGGGGAG 60.148 44.444 0.00 0.00 0.00 4.30
4587 10773 6.261435 TCATATATACAAGTACAGGGGGAGG 58.739 44.000 0.00 0.00 0.00 4.30
4588 10774 1.508256 ATACAAGTACAGGGGGAGGC 58.492 55.000 0.00 0.00 0.00 4.70
4589 10775 0.619543 TACAAGTACAGGGGGAGGCC 60.620 60.000 0.00 0.00 0.00 5.19
4590 10776 1.923395 CAAGTACAGGGGGAGGCCA 60.923 63.158 5.01 0.00 0.00 5.36
4591 10777 1.151677 AAGTACAGGGGGAGGCCAA 60.152 57.895 5.01 0.00 0.00 4.52
4592 10778 0.774491 AAGTACAGGGGGAGGCCAAA 60.774 55.000 5.01 0.00 0.00 3.28
4593 10779 1.208165 AGTACAGGGGGAGGCCAAAG 61.208 60.000 5.01 0.00 0.00 2.77
4594 10780 1.928567 TACAGGGGGAGGCCAAAGG 60.929 63.158 5.01 0.00 0.00 3.11
4607 10793 3.676291 GCCAAAGGCCAAAATACAGAA 57.324 42.857 5.01 0.00 44.06 3.02
4608 10794 4.001618 GCCAAAGGCCAAAATACAGAAA 57.998 40.909 5.01 0.00 44.06 2.52
4609 10795 3.996363 GCCAAAGGCCAAAATACAGAAAG 59.004 43.478 5.01 0.00 44.06 2.62
4610 10796 3.996363 CCAAAGGCCAAAATACAGAAAGC 59.004 43.478 5.01 0.00 0.00 3.51
4611 10797 3.961480 AAGGCCAAAATACAGAAAGCC 57.039 42.857 5.01 0.00 39.25 4.35
4612 10798 2.888212 AGGCCAAAATACAGAAAGCCA 58.112 42.857 5.01 0.00 41.45 4.75
4613 10799 3.238597 AGGCCAAAATACAGAAAGCCAA 58.761 40.909 5.01 0.00 41.45 4.52
4614 10800 3.645687 AGGCCAAAATACAGAAAGCCAAA 59.354 39.130 5.01 0.00 41.45 3.28
4615 10801 4.102367 AGGCCAAAATACAGAAAGCCAAAA 59.898 37.500 5.01 0.00 41.45 2.44
4616 10802 4.452114 GGCCAAAATACAGAAAGCCAAAAG 59.548 41.667 0.00 0.00 38.79 2.27
4617 10803 5.296748 GCCAAAATACAGAAAGCCAAAAGA 58.703 37.500 0.00 0.00 0.00 2.52
4618 10804 5.177511 GCCAAAATACAGAAAGCCAAAAGAC 59.822 40.000 0.00 0.00 0.00 3.01
4619 10805 6.279882 CCAAAATACAGAAAGCCAAAAGACA 58.720 36.000 0.00 0.00 0.00 3.41
4620 10806 6.930722 CCAAAATACAGAAAGCCAAAAGACAT 59.069 34.615 0.00 0.00 0.00 3.06
4621 10807 7.116805 CCAAAATACAGAAAGCCAAAAGACATC 59.883 37.037 0.00 0.00 0.00 3.06
4622 10808 6.899393 AATACAGAAAGCCAAAAGACATCA 57.101 33.333 0.00 0.00 0.00 3.07
4623 10809 7.472334 AATACAGAAAGCCAAAAGACATCAT 57.528 32.000 0.00 0.00 0.00 2.45
4624 10810 8.579850 AATACAGAAAGCCAAAAGACATCATA 57.420 30.769 0.00 0.00 0.00 2.15
4625 10811 6.899393 ACAGAAAGCCAAAAGACATCATAA 57.101 33.333 0.00 0.00 0.00 1.90
4626 10812 7.288810 ACAGAAAGCCAAAAGACATCATAAA 57.711 32.000 0.00 0.00 0.00 1.40
4627 10813 7.899973 ACAGAAAGCCAAAAGACATCATAAAT 58.100 30.769 0.00 0.00 0.00 1.40
4628 10814 9.023962 ACAGAAAGCCAAAAGACATCATAAATA 57.976 29.630 0.00 0.00 0.00 1.40
4646 10832 9.826574 TCATAAATATAACTCTAACACACCACC 57.173 33.333 0.00 0.00 0.00 4.61
4647 10833 9.052759 CATAAATATAACTCTAACACACCACCC 57.947 37.037 0.00 0.00 0.00 4.61
4648 10834 3.994931 ATAACTCTAACACACCACCCC 57.005 47.619 0.00 0.00 0.00 4.95
4649 10835 0.769247 AACTCTAACACACCACCCCC 59.231 55.000 0.00 0.00 0.00 5.40
4665 10851 3.271250 CCCCCTCAAACTCATGGTG 57.729 57.895 0.00 0.00 0.00 4.17
4666 10852 0.323725 CCCCCTCAAACTCATGGTGG 60.324 60.000 0.00 0.00 0.00 4.61
4667 10853 0.698238 CCCCTCAAACTCATGGTGGA 59.302 55.000 0.00 0.00 0.00 4.02
4668 10854 1.285962 CCCCTCAAACTCATGGTGGAT 59.714 52.381 0.00 0.00 0.00 3.41
4669 10855 2.648059 CCCTCAAACTCATGGTGGATC 58.352 52.381 0.00 0.00 0.00 3.36
4670 10856 2.240667 CCCTCAAACTCATGGTGGATCT 59.759 50.000 0.00 0.00 0.00 2.75
4671 10857 3.276857 CCTCAAACTCATGGTGGATCTG 58.723 50.000 0.00 0.00 0.00 2.90
4672 10858 2.681848 CTCAAACTCATGGTGGATCTGC 59.318 50.000 0.00 0.00 0.00 4.26
4673 10859 2.040145 TCAAACTCATGGTGGATCTGCA 59.960 45.455 0.00 0.00 0.00 4.41
4674 10860 2.821378 CAAACTCATGGTGGATCTGCAA 59.179 45.455 0.00 0.00 0.00 4.08
4675 10861 2.119801 ACTCATGGTGGATCTGCAAC 57.880 50.000 0.00 0.00 0.00 4.17
4676 10862 1.352017 ACTCATGGTGGATCTGCAACA 59.648 47.619 0.00 0.00 0.00 3.33
4677 10863 1.741706 CTCATGGTGGATCTGCAACAC 59.258 52.381 0.00 0.00 0.00 3.32
4678 10864 1.352017 TCATGGTGGATCTGCAACACT 59.648 47.619 9.43 0.00 35.53 3.55
4679 10865 2.571202 TCATGGTGGATCTGCAACACTA 59.429 45.455 9.43 5.17 35.53 2.74
4680 10866 3.008923 TCATGGTGGATCTGCAACACTAA 59.991 43.478 9.43 1.69 35.53 2.24
4681 10867 3.057969 TGGTGGATCTGCAACACTAAG 57.942 47.619 9.43 0.00 35.53 2.18
4682 10868 2.371841 TGGTGGATCTGCAACACTAAGT 59.628 45.455 9.43 0.00 35.53 2.24
4683 10869 3.181445 TGGTGGATCTGCAACACTAAGTT 60.181 43.478 9.43 0.00 42.42 2.66
4684 10870 3.821033 GGTGGATCTGCAACACTAAGTTT 59.179 43.478 9.43 0.00 38.74 2.66
4685 10871 4.320494 GGTGGATCTGCAACACTAAGTTTG 60.320 45.833 9.43 0.00 38.74 2.93
4686 10872 4.515191 GTGGATCTGCAACACTAAGTTTGA 59.485 41.667 0.00 0.00 38.74 2.69
4687 10873 5.008613 GTGGATCTGCAACACTAAGTTTGAA 59.991 40.000 0.00 0.00 38.74 2.69
4688 10874 5.239306 TGGATCTGCAACACTAAGTTTGAAG 59.761 40.000 0.00 0.00 38.74 3.02
4689 10875 5.470098 GGATCTGCAACACTAAGTTTGAAGA 59.530 40.000 4.71 4.71 38.74 2.87
4690 10876 5.991328 TCTGCAACACTAAGTTTGAAGAG 57.009 39.130 0.00 0.00 38.74 2.85
4691 10877 4.816385 TCTGCAACACTAAGTTTGAAGAGG 59.184 41.667 0.00 0.00 38.74 3.69
4692 10878 4.523083 TGCAACACTAAGTTTGAAGAGGT 58.477 39.130 0.00 0.00 38.74 3.85
4693 10879 5.676552 TGCAACACTAAGTTTGAAGAGGTA 58.323 37.500 0.00 0.00 38.74 3.08
4694 10880 6.116806 TGCAACACTAAGTTTGAAGAGGTAA 58.883 36.000 0.00 0.00 38.74 2.85
4695 10881 6.600032 TGCAACACTAAGTTTGAAGAGGTAAA 59.400 34.615 0.00 0.00 38.74 2.01
4696 10882 7.121463 TGCAACACTAAGTTTGAAGAGGTAAAA 59.879 33.333 0.00 0.00 38.74 1.52
4697 10883 8.135529 GCAACACTAAGTTTGAAGAGGTAAAAT 58.864 33.333 0.00 0.00 38.74 1.82
4698 10884 9.665264 CAACACTAAGTTTGAAGAGGTAAAATC 57.335 33.333 0.00 0.00 38.74 2.17
4699 10885 8.392372 ACACTAAGTTTGAAGAGGTAAAATCC 57.608 34.615 0.00 0.00 0.00 3.01
4700 10886 7.996644 ACACTAAGTTTGAAGAGGTAAAATCCA 59.003 33.333 0.00 0.00 0.00 3.41
4701 10887 9.014297 CACTAAGTTTGAAGAGGTAAAATCCAT 57.986 33.333 0.00 0.00 0.00 3.41
4702 10888 9.014297 ACTAAGTTTGAAGAGGTAAAATCCATG 57.986 33.333 0.00 0.00 0.00 3.66
4703 10889 7.839680 AAGTTTGAAGAGGTAAAATCCATGT 57.160 32.000 0.00 0.00 0.00 3.21
4704 10890 7.839680 AGTTTGAAGAGGTAAAATCCATGTT 57.160 32.000 0.00 0.00 0.00 2.71
4705 10891 7.661040 AGTTTGAAGAGGTAAAATCCATGTTG 58.339 34.615 0.00 0.00 0.00 3.33
4706 10892 7.287696 AGTTTGAAGAGGTAAAATCCATGTTGT 59.712 33.333 0.00 0.00 0.00 3.32
4707 10893 6.573664 TGAAGAGGTAAAATCCATGTTGTG 57.426 37.500 0.00 0.00 0.00 3.33
4708 10894 5.048083 TGAAGAGGTAAAATCCATGTTGTGC 60.048 40.000 0.00 0.00 0.00 4.57
4709 10895 4.666512 AGAGGTAAAATCCATGTTGTGCT 58.333 39.130 0.00 0.00 0.00 4.40
4710 10896 4.702131 AGAGGTAAAATCCATGTTGTGCTC 59.298 41.667 0.00 0.00 0.00 4.26
4711 10897 4.666512 AGGTAAAATCCATGTTGTGCTCT 58.333 39.130 0.00 0.00 0.00 4.09
4712 10898 5.815581 AGGTAAAATCCATGTTGTGCTCTA 58.184 37.500 0.00 0.00 0.00 2.43
4713 10899 5.882557 AGGTAAAATCCATGTTGTGCTCTAG 59.117 40.000 0.00 0.00 0.00 2.43
4714 10900 5.648092 GGTAAAATCCATGTTGTGCTCTAGT 59.352 40.000 0.00 0.00 0.00 2.57
4715 10901 5.886960 AAAATCCATGTTGTGCTCTAGTC 57.113 39.130 0.00 0.00 0.00 2.59
4716 10902 4.833478 AATCCATGTTGTGCTCTAGTCT 57.167 40.909 0.00 0.00 0.00 3.24
4717 10903 3.599730 TCCATGTTGTGCTCTAGTCTG 57.400 47.619 0.00 0.00 0.00 3.51
4718 10904 2.234661 TCCATGTTGTGCTCTAGTCTGG 59.765 50.000 0.00 0.00 0.00 3.86
4719 10905 2.625737 CATGTTGTGCTCTAGTCTGGG 58.374 52.381 0.00 0.00 0.00 4.45
4720 10906 0.321671 TGTTGTGCTCTAGTCTGGGC 59.678 55.000 0.00 0.00 0.00 5.36
4721 10907 0.391793 GTTGTGCTCTAGTCTGGGCC 60.392 60.000 0.00 0.00 0.00 5.80
4722 10908 0.545309 TTGTGCTCTAGTCTGGGCCT 60.545 55.000 4.53 0.00 0.00 5.19
4723 10909 0.545309 TGTGCTCTAGTCTGGGCCTT 60.545 55.000 4.53 0.00 0.00 4.35
4724 10910 0.176910 GTGCTCTAGTCTGGGCCTTC 59.823 60.000 4.53 0.00 0.00 3.46
4725 10911 1.323271 TGCTCTAGTCTGGGCCTTCG 61.323 60.000 4.53 0.00 0.00 3.79
4726 10912 1.324005 GCTCTAGTCTGGGCCTTCGT 61.324 60.000 4.53 0.00 0.00 3.85
4727 10913 0.457851 CTCTAGTCTGGGCCTTCGTG 59.542 60.000 4.53 0.00 0.00 4.35
4728 10914 0.039180 TCTAGTCTGGGCCTTCGTGA 59.961 55.000 4.53 0.00 0.00 4.35
4729 10915 0.895530 CTAGTCTGGGCCTTCGTGAA 59.104 55.000 4.53 0.00 0.00 3.18
4730 10916 0.895530 TAGTCTGGGCCTTCGTGAAG 59.104 55.000 4.53 2.57 38.14 3.02
4731 10917 0.832135 AGTCTGGGCCTTCGTGAAGA 60.832 55.000 11.11 0.00 40.79 2.87
4732 10918 0.034896 GTCTGGGCCTTCGTGAAGAA 59.965 55.000 11.11 0.00 40.79 2.52
4741 10927 2.631418 TTCGTGAAGAAGTCCGCTAG 57.369 50.000 0.00 0.00 34.26 3.42
4742 10928 0.170561 TCGTGAAGAAGTCCGCTAGC 59.829 55.000 4.06 4.06 0.00 3.42
4743 10929 0.171455 CGTGAAGAAGTCCGCTAGCT 59.829 55.000 13.93 0.00 0.00 3.32
4744 10930 1.634702 GTGAAGAAGTCCGCTAGCTG 58.365 55.000 13.93 6.46 0.00 4.24
4745 10931 1.067495 GTGAAGAAGTCCGCTAGCTGT 60.067 52.381 13.93 0.00 0.00 4.40
4746 10932 2.163815 GTGAAGAAGTCCGCTAGCTGTA 59.836 50.000 13.93 0.00 0.00 2.74
4747 10933 2.823747 TGAAGAAGTCCGCTAGCTGTAA 59.176 45.455 13.93 0.00 0.00 2.41
4748 10934 3.447586 TGAAGAAGTCCGCTAGCTGTAAT 59.552 43.478 13.93 0.00 0.00 1.89
4749 10935 4.081642 TGAAGAAGTCCGCTAGCTGTAATT 60.082 41.667 13.93 3.22 0.00 1.40
4750 10936 4.048241 AGAAGTCCGCTAGCTGTAATTC 57.952 45.455 13.93 12.09 0.00 2.17
4751 10937 3.447586 AGAAGTCCGCTAGCTGTAATTCA 59.552 43.478 13.93 0.00 0.00 2.57
4752 10938 3.444703 AGTCCGCTAGCTGTAATTCAG 57.555 47.619 13.93 0.00 46.12 3.02
4753 10939 3.024547 AGTCCGCTAGCTGTAATTCAGA 58.975 45.455 13.93 0.00 46.27 3.27
4754 10940 3.447586 AGTCCGCTAGCTGTAATTCAGAA 59.552 43.478 13.93 0.00 46.27 3.02
4755 10941 3.799420 GTCCGCTAGCTGTAATTCAGAAG 59.201 47.826 13.93 6.34 46.27 2.85
4756 10942 3.126831 CCGCTAGCTGTAATTCAGAAGG 58.873 50.000 13.93 0.00 46.27 3.46
4757 10943 2.541762 CGCTAGCTGTAATTCAGAAGGC 59.458 50.000 13.93 7.31 46.27 4.35
4758 10944 3.535561 GCTAGCTGTAATTCAGAAGGCA 58.464 45.455 7.70 0.00 46.27 4.75
4759 10945 3.311048 GCTAGCTGTAATTCAGAAGGCAC 59.689 47.826 7.70 0.00 46.27 5.01
4760 10946 3.423539 AGCTGTAATTCAGAAGGCACA 57.576 42.857 8.52 0.00 46.27 4.57
4761 10947 3.960571 AGCTGTAATTCAGAAGGCACAT 58.039 40.909 8.52 0.00 46.27 3.21
4762 10948 5.102953 AGCTGTAATTCAGAAGGCACATA 57.897 39.130 8.52 0.00 46.27 2.29
4763 10949 4.878397 AGCTGTAATTCAGAAGGCACATAC 59.122 41.667 8.52 0.00 46.27 2.39
4764 10950 4.260375 GCTGTAATTCAGAAGGCACATACG 60.260 45.833 8.52 0.00 46.27 3.06
4765 10951 4.188462 TGTAATTCAGAAGGCACATACGG 58.812 43.478 0.00 0.00 0.00 4.02
4766 10952 3.627395 AATTCAGAAGGCACATACGGA 57.373 42.857 0.00 0.00 0.00 4.69
4767 10953 3.627395 ATTCAGAAGGCACATACGGAA 57.373 42.857 0.00 0.00 0.00 4.30
4768 10954 2.672961 TCAGAAGGCACATACGGAAG 57.327 50.000 0.00 0.00 0.00 3.46
4769 10955 2.176045 TCAGAAGGCACATACGGAAGA 58.824 47.619 0.00 0.00 0.00 2.87
4770 10956 2.166459 TCAGAAGGCACATACGGAAGAG 59.834 50.000 0.00 0.00 0.00 2.85
4771 10957 1.134670 AGAAGGCACATACGGAAGAGC 60.135 52.381 0.00 0.00 0.00 4.09
4772 10958 0.613260 AAGGCACATACGGAAGAGCA 59.387 50.000 0.00 0.00 0.00 4.26
4773 10959 0.613260 AGGCACATACGGAAGAGCAA 59.387 50.000 0.00 0.00 0.00 3.91
4774 10960 0.727398 GGCACATACGGAAGAGCAAC 59.273 55.000 0.00 0.00 0.00 4.17
4775 10961 1.438651 GCACATACGGAAGAGCAACA 58.561 50.000 0.00 0.00 0.00 3.33
4776 10962 1.804151 GCACATACGGAAGAGCAACAA 59.196 47.619 0.00 0.00 0.00 2.83
4777 10963 2.412847 GCACATACGGAAGAGCAACAAC 60.413 50.000 0.00 0.00 0.00 3.32
4778 10964 2.805671 CACATACGGAAGAGCAACAACA 59.194 45.455 0.00 0.00 0.00 3.33
4779 10965 3.436704 CACATACGGAAGAGCAACAACAT 59.563 43.478 0.00 0.00 0.00 2.71
4780 10966 3.436704 ACATACGGAAGAGCAACAACATG 59.563 43.478 0.00 0.00 0.00 3.21
4781 10967 2.254546 ACGGAAGAGCAACAACATGA 57.745 45.000 0.00 0.00 0.00 3.07
4782 10968 2.783135 ACGGAAGAGCAACAACATGAT 58.217 42.857 0.00 0.00 0.00 2.45
4783 10969 2.744202 ACGGAAGAGCAACAACATGATC 59.256 45.455 0.00 0.00 35.99 2.92
4784 10970 2.096496 CGGAAGAGCAACAACATGATCC 59.904 50.000 0.00 0.00 36.40 3.36
4785 10971 3.350833 GGAAGAGCAACAACATGATCCT 58.649 45.455 0.00 0.00 36.40 3.24
4786 10972 3.128242 GGAAGAGCAACAACATGATCCTG 59.872 47.826 0.00 0.00 36.40 3.86
4787 10973 2.089980 AGAGCAACAACATGATCCTGC 58.910 47.619 0.00 3.04 36.40 4.85
4788 10974 1.814394 GAGCAACAACATGATCCTGCA 59.186 47.619 0.00 0.00 29.58 4.41
4789 10975 1.542915 AGCAACAACATGATCCTGCAC 59.457 47.619 0.00 0.00 32.21 4.57
4790 10976 1.270274 GCAACAACATGATCCTGCACA 59.730 47.619 0.00 0.00 0.00 4.57
4791 10977 2.670229 GCAACAACATGATCCTGCACAG 60.670 50.000 0.00 0.00 0.00 3.66
4792 10978 1.171308 ACAACATGATCCTGCACAGC 58.829 50.000 0.00 0.00 0.00 4.40
4793 10979 1.170442 CAACATGATCCTGCACAGCA 58.830 50.000 0.00 0.00 36.92 4.41
4804 10990 4.610890 CACAGCAGCGCGCACAAA 62.611 61.111 35.10 0.00 46.13 2.83
4805 10991 4.318021 ACAGCAGCGCGCACAAAG 62.318 61.111 35.10 20.33 46.13 2.77
4806 10992 4.016629 CAGCAGCGCGCACAAAGA 62.017 61.111 35.10 0.00 46.13 2.52
4807 10993 3.279116 AGCAGCGCGCACAAAGAA 61.279 55.556 35.10 0.00 46.13 2.52
4808 10994 2.353376 GCAGCGCGCACAAAGAAA 60.353 55.556 35.10 0.00 41.79 2.52
4809 10995 2.359791 GCAGCGCGCACAAAGAAAG 61.360 57.895 35.10 11.53 41.79 2.62
4810 10996 2.050985 AGCGCGCACAAAGAAAGC 60.051 55.556 35.10 0.00 0.00 3.51
4811 10997 2.353376 GCGCGCACAAAGAAAGCA 60.353 55.556 29.10 0.00 0.00 3.91
4812 10998 1.730547 GCGCGCACAAAGAAAGCAT 60.731 52.632 29.10 0.00 0.00 3.79
4813 10999 1.668253 GCGCGCACAAAGAAAGCATC 61.668 55.000 29.10 0.00 0.00 3.91
4814 11000 0.385849 CGCGCACAAAGAAAGCATCA 60.386 50.000 8.75 0.00 0.00 3.07
4815 11001 1.769733 GCGCACAAAGAAAGCATCAA 58.230 45.000 0.30 0.00 0.00 2.57
4816 11002 1.453148 GCGCACAAAGAAAGCATCAAC 59.547 47.619 0.30 0.00 0.00 3.18
4817 11003 2.730069 CGCACAAAGAAAGCATCAACA 58.270 42.857 0.00 0.00 0.00 3.33
4818 11004 2.468777 CGCACAAAGAAAGCATCAACAC 59.531 45.455 0.00 0.00 0.00 3.32
4819 11005 2.796593 GCACAAAGAAAGCATCAACACC 59.203 45.455 0.00 0.00 0.00 4.16
4820 11006 3.737663 GCACAAAGAAAGCATCAACACCA 60.738 43.478 0.00 0.00 0.00 4.17
4821 11007 4.431809 CACAAAGAAAGCATCAACACCAA 58.568 39.130 0.00 0.00 0.00 3.67
4822 11008 5.051816 CACAAAGAAAGCATCAACACCAAT 58.948 37.500 0.00 0.00 0.00 3.16
4823 11009 6.215121 CACAAAGAAAGCATCAACACCAATA 58.785 36.000 0.00 0.00 0.00 1.90
4824 11010 6.869913 CACAAAGAAAGCATCAACACCAATAT 59.130 34.615 0.00 0.00 0.00 1.28
4825 11011 6.869913 ACAAAGAAAGCATCAACACCAATATG 59.130 34.615 0.00 0.00 0.00 1.78
4826 11012 5.002464 AGAAAGCATCAACACCAATATGC 57.998 39.130 0.00 0.00 43.97 3.14
4830 11016 3.450578 GCATCAACACCAATATGCTTGG 58.549 45.455 1.79 1.79 44.91 3.61
4851 11037 2.045926 GCTCATGCTTCACGGGGT 60.046 61.111 0.00 0.00 36.03 4.95
4852 11038 2.109126 GCTCATGCTTCACGGGGTC 61.109 63.158 0.00 0.00 36.03 4.46
4853 11039 1.450312 CTCATGCTTCACGGGGTCC 60.450 63.158 0.00 0.00 0.00 4.46
4854 11040 2.438434 CATGCTTCACGGGGTCCC 60.438 66.667 0.00 0.00 0.00 4.46
4865 11051 4.944372 GGGTCCCGCGCGATACTG 62.944 72.222 34.63 14.36 0.00 2.74
4866 11052 3.896133 GGTCCCGCGCGATACTGA 61.896 66.667 34.63 16.10 0.00 3.41
4867 11053 2.335369 GTCCCGCGCGATACTGAT 59.665 61.111 34.63 0.00 0.00 2.90
4868 11054 1.577922 GTCCCGCGCGATACTGATA 59.422 57.895 34.63 3.71 0.00 2.15
4869 11055 0.454620 GTCCCGCGCGATACTGATAG 60.455 60.000 34.63 10.97 0.00 2.08
4870 11056 1.801913 CCCGCGCGATACTGATAGC 60.802 63.158 34.63 0.00 0.00 2.97
4871 11057 1.081442 CCGCGCGATACTGATAGCA 60.081 57.895 34.63 0.00 33.59 3.49
4872 11058 1.337817 CCGCGCGATACTGATAGCAC 61.338 60.000 34.63 0.00 33.59 4.40
4873 11059 1.337817 CGCGCGATACTGATAGCACC 61.338 60.000 28.94 0.00 33.59 5.01
4874 11060 0.039074 GCGCGATACTGATAGCACCT 60.039 55.000 12.10 0.00 33.59 4.00
4875 11061 1.691127 CGCGATACTGATAGCACCTG 58.309 55.000 0.00 0.00 33.59 4.00
4876 11062 1.001268 CGCGATACTGATAGCACCTGT 60.001 52.381 0.00 0.00 33.59 4.00
4877 11063 2.225727 CGCGATACTGATAGCACCTGTA 59.774 50.000 0.00 0.00 33.59 2.74
4878 11064 3.566523 GCGATACTGATAGCACCTGTAC 58.433 50.000 0.00 0.00 34.12 2.90
4879 11065 3.253677 GCGATACTGATAGCACCTGTACT 59.746 47.826 0.00 0.00 34.12 2.73
4880 11066 4.788690 CGATACTGATAGCACCTGTACTG 58.211 47.826 0.00 0.00 0.00 2.74
4881 11067 4.276183 CGATACTGATAGCACCTGTACTGT 59.724 45.833 0.00 0.00 0.00 3.55
4882 11068 5.561145 CGATACTGATAGCACCTGTACTGTC 60.561 48.000 0.00 0.00 0.00 3.51
4883 11069 3.702792 ACTGATAGCACCTGTACTGTCT 58.297 45.455 0.00 0.00 0.00 3.41
4884 11070 3.445450 ACTGATAGCACCTGTACTGTCTG 59.555 47.826 0.00 1.42 0.00 3.51
4885 11071 3.696548 CTGATAGCACCTGTACTGTCTGA 59.303 47.826 0.00 0.00 0.00 3.27
4886 11072 3.444034 TGATAGCACCTGTACTGTCTGAC 59.556 47.826 0.00 0.00 0.00 3.51
4887 11073 1.704641 AGCACCTGTACTGTCTGACA 58.295 50.000 10.50 10.50 0.00 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 4.632538 AGTTGTGCTTAGAACCAAACAC 57.367 40.909 0.00 0.00 0.00 3.32
30 31 3.739077 GCAAAGTGTGGCAAGTTGT 57.261 47.368 4.48 0.00 0.00 3.32
38 39 0.751277 TGAGGTGTGGCAAAGTGTGG 60.751 55.000 0.00 0.00 0.00 4.17
39 40 1.102154 TTGAGGTGTGGCAAAGTGTG 58.898 50.000 0.00 0.00 0.00 3.82
40 41 1.102978 GTTGAGGTGTGGCAAAGTGT 58.897 50.000 0.00 0.00 0.00 3.55
41 42 1.392589 AGTTGAGGTGTGGCAAAGTG 58.607 50.000 0.00 0.00 0.00 3.16
42 43 2.143876 AAGTTGAGGTGTGGCAAAGT 57.856 45.000 0.00 0.00 0.00 2.66
43 44 3.251004 GTCTAAGTTGAGGTGTGGCAAAG 59.749 47.826 0.00 0.00 0.00 2.77
44 45 3.211045 GTCTAAGTTGAGGTGTGGCAAA 58.789 45.455 0.00 0.00 0.00 3.68
68 69 1.822371 ACACACCCAACTTGGTCAAAC 59.178 47.619 7.06 0.00 36.12 2.93
73 74 1.548269 CAAACACACACCCAACTTGGT 59.452 47.619 7.06 0.00 39.96 3.67
78 79 2.753055 AAACCAAACACACACCCAAC 57.247 45.000 0.00 0.00 0.00 3.77
79 80 3.403038 CAAAAACCAAACACACACCCAA 58.597 40.909 0.00 0.00 0.00 4.12
80 81 2.872038 GCAAAAACCAAACACACACCCA 60.872 45.455 0.00 0.00 0.00 4.51
81 82 1.735018 GCAAAAACCAAACACACACCC 59.265 47.619 0.00 0.00 0.00 4.61
130 132 2.084546 GACATGTGGGGCTTACTGTTC 58.915 52.381 1.15 0.00 0.00 3.18
132 134 1.064003 TGACATGTGGGGCTTACTGT 58.936 50.000 1.15 0.00 0.00 3.55
157 159 3.305335 GGGAATCTTGACGCACATTTTGT 60.305 43.478 0.00 0.00 0.00 2.83
166 168 1.300481 GCCTAAGGGAATCTTGACGC 58.700 55.000 0.00 0.00 36.93 5.19
169 171 2.357154 GGCTTGCCTAAGGGAATCTTGA 60.357 50.000 4.11 0.00 36.93 3.02
177 179 1.901833 ACATTTTGGCTTGCCTAAGGG 59.098 47.619 13.18 9.49 34.40 3.95
178 180 2.354003 CCACATTTTGGCTTGCCTAAGG 60.354 50.000 13.18 10.73 39.07 2.69
179 181 2.963432 CCACATTTTGGCTTGCCTAAG 58.037 47.619 13.18 3.76 39.07 2.18
212 215 0.106708 ACTTGCCTCGCTTGAGTTGA 59.893 50.000 0.00 0.00 38.10 3.18
221 224 1.200020 ACTATTTTGCACTTGCCTCGC 59.800 47.619 0.00 0.00 41.18 5.03
222 225 2.226437 ACACTATTTTGCACTTGCCTCG 59.774 45.455 0.00 0.00 41.18 4.63
231 234 6.619744 CCACATATTGTCACACTATTTTGCA 58.380 36.000 0.00 0.00 0.00 4.08
232 235 5.516339 GCCACATATTGTCACACTATTTTGC 59.484 40.000 0.00 0.00 0.00 3.68
233 236 6.619744 TGCCACATATTGTCACACTATTTTG 58.380 36.000 0.00 0.00 0.00 2.44
234 237 6.832520 TGCCACATATTGTCACACTATTTT 57.167 33.333 0.00 0.00 0.00 1.82
235 238 6.127647 CCTTGCCACATATTGTCACACTATTT 60.128 38.462 0.00 0.00 0.00 1.40
236 239 5.357878 CCTTGCCACATATTGTCACACTATT 59.642 40.000 0.00 0.00 0.00 1.73
237 240 4.883585 CCTTGCCACATATTGTCACACTAT 59.116 41.667 0.00 0.00 0.00 2.12
238 241 4.019771 TCCTTGCCACATATTGTCACACTA 60.020 41.667 0.00 0.00 0.00 2.74
239 242 3.084039 CCTTGCCACATATTGTCACACT 58.916 45.455 0.00 0.00 0.00 3.55
240 243 3.081061 TCCTTGCCACATATTGTCACAC 58.919 45.455 0.00 0.00 0.00 3.82
241 244 3.431673 TCCTTGCCACATATTGTCACA 57.568 42.857 0.00 0.00 0.00 3.58
245 248 5.126067 GTGACTATCCTTGCCACATATTGT 58.874 41.667 0.00 0.00 0.00 2.71
259 262 3.378427 GCCTGTTTGGATTGTGACTATCC 59.622 47.826 17.38 17.38 41.63 2.59
260 263 3.378427 GGCCTGTTTGGATTGTGACTATC 59.622 47.826 0.00 0.00 38.35 2.08
265 268 2.238521 GAAGGCCTGTTTGGATTGTGA 58.761 47.619 5.69 0.00 38.35 3.58
267 270 1.147817 AGGAAGGCCTGTTTGGATTGT 59.852 47.619 5.69 0.00 44.90 2.71
549 1743 1.472376 GCAGAGCTTTGCTAGGATCGT 60.472 52.381 21.29 0.00 39.88 3.73
631 1869 2.879462 CGCACGAGCTTCCGTACC 60.879 66.667 2.73 0.00 41.29 3.34
641 1879 4.538283 ATCGACGAGCCGCACGAG 62.538 66.667 17.30 10.10 40.45 4.18
716 2785 1.612726 GGGAGAGTTGCATGCAGACTT 60.613 52.381 25.81 18.73 0.00 3.01
908 3311 1.214062 GTGAGTGTGAGCGAGGAGG 59.786 63.158 0.00 0.00 0.00 4.30
1089 3494 4.423209 GCCCCTCCCCTCCTGACT 62.423 72.222 0.00 0.00 0.00 3.41
1343 3748 1.439543 GGGGAGCAGGAGGAATGTAT 58.560 55.000 0.00 0.00 0.00 2.29
1344 3749 0.694444 GGGGGAGCAGGAGGAATGTA 60.694 60.000 0.00 0.00 0.00 2.29
1345 3750 2.003548 GGGGGAGCAGGAGGAATGT 61.004 63.158 0.00 0.00 0.00 2.71
1347 3752 1.385206 GAGGGGGAGCAGGAGGAAT 60.385 63.158 0.00 0.00 0.00 3.01
1348 3753 2.041265 GAGGGGGAGCAGGAGGAA 59.959 66.667 0.00 0.00 0.00 3.36
1354 3759 4.748798 AGTGGGGAGGGGGAGCAG 62.749 72.222 0.00 0.00 0.00 4.24
1355 3760 4.741239 GAGTGGGGAGGGGGAGCA 62.741 72.222 0.00 0.00 0.00 4.26
1361 3766 3.406595 GAATGCCGAGTGGGGAGGG 62.407 68.421 0.00 0.00 40.71 4.30
1362 3767 2.190578 GAATGCCGAGTGGGGAGG 59.809 66.667 0.00 0.00 40.71 4.30
1363 3768 1.144936 GAGAATGCCGAGTGGGGAG 59.855 63.158 0.00 0.00 40.71 4.30
1364 3769 1.612146 TGAGAATGCCGAGTGGGGA 60.612 57.895 0.00 0.00 42.12 4.81
1365 3770 1.450312 GTGAGAATGCCGAGTGGGG 60.450 63.158 0.00 0.00 35.78 4.96
1366 3771 0.107508 ATGTGAGAATGCCGAGTGGG 60.108 55.000 0.00 0.00 39.58 4.61
1367 3772 1.293924 GATGTGAGAATGCCGAGTGG 58.706 55.000 0.00 0.00 38.77 4.00
1374 3779 2.094026 GGGGTTTTGGATGTGAGAATGC 60.094 50.000 0.00 0.00 0.00 3.56
1388 3793 1.533994 GAGGGCTTGCTGGGGTTTT 60.534 57.895 0.00 0.00 0.00 2.43
1409 3814 2.922387 CGAACAATGCTCTGAGTCTGAG 59.078 50.000 19.73 19.73 33.52 3.35
1410 3815 2.297315 ACGAACAATGCTCTGAGTCTGA 59.703 45.455 6.53 0.00 0.00 3.27
1412 3817 2.669670 CGACGAACAATGCTCTGAGTCT 60.670 50.000 6.53 0.00 0.00 3.24
1413 3818 1.651138 CGACGAACAATGCTCTGAGTC 59.349 52.381 6.53 0.00 0.00 3.36
1414 3819 1.269723 TCGACGAACAATGCTCTGAGT 59.730 47.619 6.53 0.00 0.00 3.41
1416 3821 2.530177 GATCGACGAACAATGCTCTGA 58.470 47.619 0.00 0.00 0.00 3.27
1418 3823 1.471676 GGGATCGACGAACAATGCTCT 60.472 52.381 0.00 0.00 0.00 4.09
1434 5085 4.556697 ACAAGAAAGTTGAAAAGGGGGAT 58.443 39.130 0.00 0.00 0.00 3.85
1457 5109 5.856156 ACATGCACAAAAATGAAATCCAGA 58.144 33.333 0.00 0.00 0.00 3.86
1539 5191 5.900339 TTGTAGAACTTTAGCACTGAACG 57.100 39.130 0.00 0.00 0.00 3.95
1556 5208 7.540299 TGTTACCCTTGAGTTTTGTTTTGTAG 58.460 34.615 0.00 0.00 0.00 2.74
1569 5221 6.944234 AGAAAAGAACTTGTTACCCTTGAG 57.056 37.500 0.00 0.00 0.00 3.02
1570 5222 7.571025 ACTAGAAAAGAACTTGTTACCCTTGA 58.429 34.615 0.00 0.00 0.00 3.02
1571 5223 7.803279 ACTAGAAAAGAACTTGTTACCCTTG 57.197 36.000 0.00 0.00 0.00 3.61
1573 5225 9.557061 CTAAACTAGAAAAGAACTTGTTACCCT 57.443 33.333 0.00 0.00 33.78 4.34
1756 5408 5.665459 CAACCCTTAGGACTCAGTAAGATG 58.335 45.833 0.00 0.00 36.73 2.90
1886 5551 5.891451 TCGTTCTAGTGTCATGTTAGGATG 58.109 41.667 0.00 0.00 0.00 3.51
1907 5572 5.683876 AGGATTGGGATATGTCCTTATCG 57.316 43.478 8.56 0.00 44.44 2.92
1914 5579 7.861629 TCCATATGTTAGGATTGGGATATGTC 58.138 38.462 1.24 0.00 0.00 3.06
1915 5580 7.829224 TCCATATGTTAGGATTGGGATATGT 57.171 36.000 1.24 0.00 0.00 2.29
1921 5586 6.633325 AGAGATCCATATGTTAGGATTGGG 57.367 41.667 1.24 0.00 44.44 4.12
1946 5611 1.861982 TTCCCCAGCTCCTACAGTAC 58.138 55.000 0.00 0.00 0.00 2.73
2367 6033 3.571828 ACTGTAGCATGAGAGCGATATGT 59.428 43.478 0.00 0.00 40.15 2.29
2374 6040 1.066573 ACACCACTGTAGCATGAGAGC 60.067 52.381 0.00 0.00 0.00 4.09
2579 6246 2.496871 TCGGCTAATTTTCCGTCCTACA 59.503 45.455 14.91 0.00 45.44 2.74
2580 6247 3.121544 CTCGGCTAATTTTCCGTCCTAC 58.878 50.000 14.91 0.00 45.44 3.18
2582 6249 1.553704 ACTCGGCTAATTTTCCGTCCT 59.446 47.619 14.91 0.79 45.44 3.85
2584 6251 4.032558 CAGTAACTCGGCTAATTTTCCGTC 59.967 45.833 14.91 5.52 45.44 4.79
2585 6252 3.930848 CAGTAACTCGGCTAATTTTCCGT 59.069 43.478 14.91 2.74 45.44 4.69
2586 6253 4.178540 TCAGTAACTCGGCTAATTTTCCG 58.821 43.478 10.68 10.68 46.52 4.30
2588 6255 7.975750 AGAAATCAGTAACTCGGCTAATTTTC 58.024 34.615 0.00 0.00 0.00 2.29
2619 6291 7.039082 CCCCAGTTTTTCTCCTGAATGAATAAA 60.039 37.037 0.00 0.00 31.56 1.40
2620 6292 6.437162 CCCCAGTTTTTCTCCTGAATGAATAA 59.563 38.462 0.00 0.00 31.56 1.40
2621 6293 5.951747 CCCCAGTTTTTCTCCTGAATGAATA 59.048 40.000 0.00 0.00 31.56 1.75
2622 6294 4.774200 CCCCAGTTTTTCTCCTGAATGAAT 59.226 41.667 0.00 0.00 31.56 2.57
2729 6401 4.454504 CCGCACACTATTTGGTAAAAGAGT 59.545 41.667 0.00 0.00 46.23 3.24
2768 6440 0.107848 CCACCGTCGAAATAGGGCTT 60.108 55.000 0.00 0.00 0.00 4.35
2813 6485 1.353694 AGCTGGGAAAGAATGACTGCT 59.646 47.619 0.00 0.00 0.00 4.24
2984 6656 5.241662 AGAGCATTCAAGGTAGAGAACAAC 58.758 41.667 0.00 0.00 0.00 3.32
2985 6657 5.489792 AGAGCATTCAAGGTAGAGAACAA 57.510 39.130 0.00 0.00 0.00 2.83
3073 9226 5.608449 AGTCTAACAGGACTGGTTGTTTAC 58.392 41.667 4.14 0.00 43.89 2.01
3142 9295 8.238631 TCGCCTGGTAGTTGTAAAATTAAATTC 58.761 33.333 0.00 0.00 0.00 2.17
3145 9298 6.347563 CGTCGCCTGGTAGTTGTAAAATTAAA 60.348 38.462 0.00 0.00 0.00 1.52
3345 9498 9.709495 ATTGTTAGCAAATAAAGAAAAGCATCA 57.291 25.926 0.00 0.00 38.21 3.07
3359 9515 6.670695 AAGTTCCAAGGATTGTTAGCAAAT 57.329 33.333 0.00 0.00 46.99 2.32
3406 9562 0.911045 TTCCTCCTGCTGGCATCTGA 60.911 55.000 4.42 0.00 0.00 3.27
3424 9580 1.557099 TGTAGAGTGCGGTCAGGATT 58.443 50.000 0.00 0.00 0.00 3.01
3436 9592 0.824759 GGCCGTGGAAGATGTAGAGT 59.175 55.000 0.00 0.00 0.00 3.24
3610 9766 3.235200 CCCGTAGAAGATCCTGAATCCT 58.765 50.000 0.00 0.00 34.67 3.24
3775 9931 0.039035 GGCCCCAGTTCACATACCAA 59.961 55.000 0.00 0.00 0.00 3.67
3781 9937 4.329545 GCGAGGCCCCAGTTCACA 62.330 66.667 0.00 0.00 0.00 3.58
3901 10057 8.763356 CATAAATTTGCAAGCTGAAAACAGTAA 58.237 29.630 0.00 0.00 25.41 2.24
3962 10118 1.484038 TAATGCCATTGGTCTTGCCC 58.516 50.000 4.26 0.00 36.04 5.36
4007 10163 9.556030 GATACTTACATTTTACCAAGACAAAGC 57.444 33.333 0.00 0.00 0.00 3.51
4043 10199 5.545658 TGATCGGCTCATGTTTTTCTTAC 57.454 39.130 0.00 0.00 0.00 2.34
4241 10424 2.224305 GCAACGGGAGGATATAAGTGCT 60.224 50.000 0.00 0.00 0.00 4.40
4350 10533 8.738645 AGGATATGTTTAATTTGAGTGACTCC 57.261 34.615 10.52 0.00 0.00 3.85
4353 10536 8.560374 GCCTAGGATATGTTTAATTTGAGTGAC 58.440 37.037 14.75 0.00 0.00 3.67
4398 10581 8.149973 TGAGTGCTTCTTTAGTTAAAACGATT 57.850 30.769 0.00 0.00 0.00 3.34
4471 10657 7.800847 GCCGTATTTGCATTTTGTTTAATGTTT 59.199 29.630 0.00 0.00 37.72 2.83
4493 10679 4.444536 TGTATAAATAAAAGCTCGGCCGT 58.555 39.130 27.15 7.03 0.00 5.68
4496 10682 6.183360 ACACCTTGTATAAATAAAAGCTCGGC 60.183 38.462 0.00 0.00 0.00 5.54
4521 10707 9.472361 GATAATACTAAGTTGCGATTCCTAACA 57.528 33.333 0.00 0.00 0.00 2.41
4522 10708 9.694137 AGATAATACTAAGTTGCGATTCCTAAC 57.306 33.333 0.00 0.00 0.00 2.34
4523 10709 9.909644 GAGATAATACTAAGTTGCGATTCCTAA 57.090 33.333 0.00 0.00 0.00 2.69
4524 10710 9.074576 TGAGATAATACTAAGTTGCGATTCCTA 57.925 33.333 0.00 0.00 0.00 2.94
4525 10711 7.952671 TGAGATAATACTAAGTTGCGATTCCT 58.047 34.615 0.00 0.00 0.00 3.36
4526 10712 8.589335 TTGAGATAATACTAAGTTGCGATTCC 57.411 34.615 0.00 0.00 0.00 3.01
4527 10713 8.704234 CCTTGAGATAATACTAAGTTGCGATTC 58.296 37.037 0.00 0.00 0.00 2.52
4528 10714 7.171678 GCCTTGAGATAATACTAAGTTGCGATT 59.828 37.037 0.00 0.00 0.00 3.34
4529 10715 6.647067 GCCTTGAGATAATACTAAGTTGCGAT 59.353 38.462 0.00 0.00 0.00 4.58
4530 10716 5.983720 GCCTTGAGATAATACTAAGTTGCGA 59.016 40.000 0.00 0.00 0.00 5.10
4531 10717 5.177696 GGCCTTGAGATAATACTAAGTTGCG 59.822 44.000 0.00 0.00 0.00 4.85
4532 10718 6.055588 TGGCCTTGAGATAATACTAAGTTGC 58.944 40.000 3.32 0.00 0.00 4.17
4533 10719 8.506168 TTTGGCCTTGAGATAATACTAAGTTG 57.494 34.615 3.32 0.00 0.00 3.16
4534 10720 7.283354 GCTTTGGCCTTGAGATAATACTAAGTT 59.717 37.037 3.32 0.00 0.00 2.66
4535 10721 6.768381 GCTTTGGCCTTGAGATAATACTAAGT 59.232 38.462 3.32 0.00 0.00 2.24
4536 10722 7.195839 GCTTTGGCCTTGAGATAATACTAAG 57.804 40.000 3.32 0.00 0.00 2.18
4553 10739 6.824305 ACTTGTATATATGATGGCTTTGGC 57.176 37.500 0.00 0.00 37.82 4.52
4554 10740 8.846943 TGTACTTGTATATATGATGGCTTTGG 57.153 34.615 0.00 0.00 0.00 3.28
4555 10741 8.939929 CCTGTACTTGTATATATGATGGCTTTG 58.060 37.037 0.00 0.00 0.00 2.77
4556 10742 8.103305 CCCTGTACTTGTATATATGATGGCTTT 58.897 37.037 0.00 0.00 0.00 3.51
4557 10743 7.311297 CCCCTGTACTTGTATATATGATGGCTT 60.311 40.741 0.00 0.00 0.00 4.35
4558 10744 6.156949 CCCCTGTACTTGTATATATGATGGCT 59.843 42.308 0.00 0.00 0.00 4.75
4559 10745 6.349300 CCCCTGTACTTGTATATATGATGGC 58.651 44.000 0.00 0.00 0.00 4.40
4560 10746 6.672218 TCCCCCTGTACTTGTATATATGATGG 59.328 42.308 0.00 0.00 0.00 3.51
4561 10747 7.147655 CCTCCCCCTGTACTTGTATATATGATG 60.148 44.444 0.00 0.00 0.00 3.07
4562 10748 6.903534 CCTCCCCCTGTACTTGTATATATGAT 59.096 42.308 0.00 0.00 0.00 2.45
4563 10749 6.261435 CCTCCCCCTGTACTTGTATATATGA 58.739 44.000 0.00 0.00 0.00 2.15
4564 10750 5.104900 GCCTCCCCCTGTACTTGTATATATG 60.105 48.000 0.00 0.00 0.00 1.78
4565 10751 5.030820 GCCTCCCCCTGTACTTGTATATAT 58.969 45.833 0.00 0.00 0.00 0.86
4566 10752 4.422984 GCCTCCCCCTGTACTTGTATATA 58.577 47.826 0.00 0.00 0.00 0.86
4567 10753 3.248888 GCCTCCCCCTGTACTTGTATAT 58.751 50.000 0.00 0.00 0.00 0.86
4568 10754 2.686119 GCCTCCCCCTGTACTTGTATA 58.314 52.381 0.00 0.00 0.00 1.47
4569 10755 1.508256 GCCTCCCCCTGTACTTGTAT 58.492 55.000 0.00 0.00 0.00 2.29
4570 10756 0.619543 GGCCTCCCCCTGTACTTGTA 60.620 60.000 0.00 0.00 0.00 2.41
4571 10757 1.923909 GGCCTCCCCCTGTACTTGT 60.924 63.158 0.00 0.00 0.00 3.16
4572 10758 1.497309 TTGGCCTCCCCCTGTACTTG 61.497 60.000 3.32 0.00 0.00 3.16
4573 10759 0.774491 TTTGGCCTCCCCCTGTACTT 60.774 55.000 3.32 0.00 0.00 2.24
4574 10760 1.151677 TTTGGCCTCCCCCTGTACT 60.152 57.895 3.32 0.00 0.00 2.73
4575 10761 1.303282 CTTTGGCCTCCCCCTGTAC 59.697 63.158 3.32 0.00 0.00 2.90
4576 10762 1.928567 CCTTTGGCCTCCCCCTGTA 60.929 63.158 3.32 0.00 0.00 2.74
4577 10763 3.268032 CCTTTGGCCTCCCCCTGT 61.268 66.667 3.32 0.00 0.00 4.00
4578 10764 4.766632 GCCTTTGGCCTCCCCCTG 62.767 72.222 3.32 0.00 44.06 4.45
4588 10774 3.996363 GCTTTCTGTATTTTGGCCTTTGG 59.004 43.478 3.32 0.00 0.00 3.28
4589 10775 3.996363 GGCTTTCTGTATTTTGGCCTTTG 59.004 43.478 3.32 0.00 35.73 2.77
4590 10776 3.645687 TGGCTTTCTGTATTTTGGCCTTT 59.354 39.130 3.32 0.00 38.93 3.11
4591 10777 3.238597 TGGCTTTCTGTATTTTGGCCTT 58.761 40.909 3.32 0.00 38.93 4.35
4592 10778 2.888212 TGGCTTTCTGTATTTTGGCCT 58.112 42.857 3.32 0.00 38.93 5.19
4593 10779 3.676291 TTGGCTTTCTGTATTTTGGCC 57.324 42.857 0.00 0.00 38.67 5.36
4594 10780 5.177511 GTCTTTTGGCTTTCTGTATTTTGGC 59.822 40.000 0.00 0.00 0.00 4.52
4595 10781 6.279882 TGTCTTTTGGCTTTCTGTATTTTGG 58.720 36.000 0.00 0.00 0.00 3.28
4596 10782 7.652909 TGATGTCTTTTGGCTTTCTGTATTTTG 59.347 33.333 0.00 0.00 0.00 2.44
4597 10783 7.725251 TGATGTCTTTTGGCTTTCTGTATTTT 58.275 30.769 0.00 0.00 0.00 1.82
4598 10784 7.288810 TGATGTCTTTTGGCTTTCTGTATTT 57.711 32.000 0.00 0.00 0.00 1.40
4599 10785 6.899393 TGATGTCTTTTGGCTTTCTGTATT 57.101 33.333 0.00 0.00 0.00 1.89
4600 10786 8.579850 TTATGATGTCTTTTGGCTTTCTGTAT 57.420 30.769 0.00 0.00 0.00 2.29
4601 10787 7.994425 TTATGATGTCTTTTGGCTTTCTGTA 57.006 32.000 0.00 0.00 0.00 2.74
4602 10788 6.899393 TTATGATGTCTTTTGGCTTTCTGT 57.101 33.333 0.00 0.00 0.00 3.41
4620 10806 9.826574 GGTGGTGTGTTAGAGTTATATTTATGA 57.173 33.333 0.00 0.00 0.00 2.15
4621 10807 9.052759 GGGTGGTGTGTTAGAGTTATATTTATG 57.947 37.037 0.00 0.00 0.00 1.90
4622 10808 8.215736 GGGGTGGTGTGTTAGAGTTATATTTAT 58.784 37.037 0.00 0.00 0.00 1.40
4623 10809 7.365831 GGGGGTGGTGTGTTAGAGTTATATTTA 60.366 40.741 0.00 0.00 0.00 1.40
4624 10810 6.420638 GGGGTGGTGTGTTAGAGTTATATTT 58.579 40.000 0.00 0.00 0.00 1.40
4625 10811 5.104235 GGGGGTGGTGTGTTAGAGTTATATT 60.104 44.000 0.00 0.00 0.00 1.28
4626 10812 4.411212 GGGGGTGGTGTGTTAGAGTTATAT 59.589 45.833 0.00 0.00 0.00 0.86
4627 10813 3.776417 GGGGGTGGTGTGTTAGAGTTATA 59.224 47.826 0.00 0.00 0.00 0.98
4628 10814 2.574824 GGGGGTGGTGTGTTAGAGTTAT 59.425 50.000 0.00 0.00 0.00 1.89
4629 10815 1.980036 GGGGGTGGTGTGTTAGAGTTA 59.020 52.381 0.00 0.00 0.00 2.24
4630 10816 0.769247 GGGGGTGGTGTGTTAGAGTT 59.231 55.000 0.00 0.00 0.00 3.01
4631 10817 2.460027 GGGGGTGGTGTGTTAGAGT 58.540 57.895 0.00 0.00 0.00 3.24
4647 10833 0.323725 CCACCATGAGTTTGAGGGGG 60.324 60.000 0.00 0.00 38.58 5.40
4648 10834 0.698238 TCCACCATGAGTTTGAGGGG 59.302 55.000 0.00 0.00 0.00 4.79
4649 10835 2.240667 AGATCCACCATGAGTTTGAGGG 59.759 50.000 0.00 0.00 0.00 4.30
4650 10836 3.276857 CAGATCCACCATGAGTTTGAGG 58.723 50.000 0.00 0.00 0.00 3.86
4651 10837 2.681848 GCAGATCCACCATGAGTTTGAG 59.318 50.000 0.00 0.00 0.00 3.02
4652 10838 2.040145 TGCAGATCCACCATGAGTTTGA 59.960 45.455 0.00 0.00 0.00 2.69
4653 10839 2.439409 TGCAGATCCACCATGAGTTTG 58.561 47.619 0.00 0.00 0.00 2.93
4654 10840 2.821969 GTTGCAGATCCACCATGAGTTT 59.178 45.455 0.00 0.00 0.00 2.66
4655 10841 2.224843 TGTTGCAGATCCACCATGAGTT 60.225 45.455 0.00 0.00 0.00 3.01
4656 10842 1.352017 TGTTGCAGATCCACCATGAGT 59.648 47.619 0.00 0.00 0.00 3.41
4657 10843 1.741706 GTGTTGCAGATCCACCATGAG 59.258 52.381 0.00 0.00 0.00 2.90
4658 10844 1.352017 AGTGTTGCAGATCCACCATGA 59.648 47.619 0.00 0.00 0.00 3.07
4659 10845 1.830279 AGTGTTGCAGATCCACCATG 58.170 50.000 0.00 0.00 0.00 3.66
4660 10846 3.009473 ACTTAGTGTTGCAGATCCACCAT 59.991 43.478 0.00 0.00 0.00 3.55
4661 10847 2.371841 ACTTAGTGTTGCAGATCCACCA 59.628 45.455 0.00 0.00 0.00 4.17
4662 10848 3.059352 ACTTAGTGTTGCAGATCCACC 57.941 47.619 0.00 0.00 0.00 4.61
4663 10849 4.515191 TCAAACTTAGTGTTGCAGATCCAC 59.485 41.667 0.00 0.00 39.13 4.02
4664 10850 4.713553 TCAAACTTAGTGTTGCAGATCCA 58.286 39.130 0.00 0.00 39.13 3.41
4665 10851 5.470098 TCTTCAAACTTAGTGTTGCAGATCC 59.530 40.000 5.91 0.00 39.13 3.36
4666 10852 6.348050 CCTCTTCAAACTTAGTGTTGCAGATC 60.348 42.308 8.80 0.00 39.13 2.75
4667 10853 5.471456 CCTCTTCAAACTTAGTGTTGCAGAT 59.529 40.000 8.80 0.00 39.13 2.90
4668 10854 4.816385 CCTCTTCAAACTTAGTGTTGCAGA 59.184 41.667 8.34 8.34 39.13 4.26
4669 10855 4.576463 ACCTCTTCAAACTTAGTGTTGCAG 59.424 41.667 0.00 0.00 39.13 4.41
4670 10856 4.523083 ACCTCTTCAAACTTAGTGTTGCA 58.477 39.130 0.00 0.00 39.13 4.08
4671 10857 6.613755 TTACCTCTTCAAACTTAGTGTTGC 57.386 37.500 0.00 0.00 39.13 4.17
4672 10858 9.665264 GATTTTACCTCTTCAAACTTAGTGTTG 57.335 33.333 0.00 0.00 39.13 3.33
4673 10859 8.847196 GGATTTTACCTCTTCAAACTTAGTGTT 58.153 33.333 0.00 0.00 41.29 3.32
4674 10860 7.996644 TGGATTTTACCTCTTCAAACTTAGTGT 59.003 33.333 0.00 0.00 0.00 3.55
4675 10861 8.391075 TGGATTTTACCTCTTCAAACTTAGTG 57.609 34.615 0.00 0.00 0.00 2.74
4676 10862 9.014297 CATGGATTTTACCTCTTCAAACTTAGT 57.986 33.333 0.00 0.00 0.00 2.24
4677 10863 9.014297 ACATGGATTTTACCTCTTCAAACTTAG 57.986 33.333 0.00 0.00 0.00 2.18
4678 10864 8.934023 ACATGGATTTTACCTCTTCAAACTTA 57.066 30.769 0.00 0.00 0.00 2.24
4679 10865 7.839680 ACATGGATTTTACCTCTTCAAACTT 57.160 32.000 0.00 0.00 0.00 2.66
4680 10866 7.287696 ACAACATGGATTTTACCTCTTCAAACT 59.712 33.333 0.00 0.00 0.00 2.66
4681 10867 7.382218 CACAACATGGATTTTACCTCTTCAAAC 59.618 37.037 0.00 0.00 0.00 2.93
4682 10868 7.432869 CACAACATGGATTTTACCTCTTCAAA 58.567 34.615 0.00 0.00 0.00 2.69
4683 10869 6.516527 GCACAACATGGATTTTACCTCTTCAA 60.517 38.462 0.00 0.00 0.00 2.69
4684 10870 5.048083 GCACAACATGGATTTTACCTCTTCA 60.048 40.000 0.00 0.00 0.00 3.02
4685 10871 5.183904 AGCACAACATGGATTTTACCTCTTC 59.816 40.000 0.00 0.00 0.00 2.87
4686 10872 5.079643 AGCACAACATGGATTTTACCTCTT 58.920 37.500 0.00 0.00 0.00 2.85
4687 10873 4.666512 AGCACAACATGGATTTTACCTCT 58.333 39.130 0.00 0.00 0.00 3.69
4688 10874 4.702131 AGAGCACAACATGGATTTTACCTC 59.298 41.667 0.00 0.00 0.00 3.85
4689 10875 4.666512 AGAGCACAACATGGATTTTACCT 58.333 39.130 0.00 0.00 0.00 3.08
4690 10876 5.648092 ACTAGAGCACAACATGGATTTTACC 59.352 40.000 0.00 0.00 0.00 2.85
4691 10877 6.595716 AGACTAGAGCACAACATGGATTTTAC 59.404 38.462 0.00 0.00 0.00 2.01
4692 10878 6.595326 CAGACTAGAGCACAACATGGATTTTA 59.405 38.462 0.00 0.00 0.00 1.52
4693 10879 5.413833 CAGACTAGAGCACAACATGGATTTT 59.586 40.000 0.00 0.00 0.00 1.82
4694 10880 4.940046 CAGACTAGAGCACAACATGGATTT 59.060 41.667 0.00 0.00 0.00 2.17
4695 10881 4.511527 CAGACTAGAGCACAACATGGATT 58.488 43.478 0.00 0.00 0.00 3.01
4696 10882 3.118482 CCAGACTAGAGCACAACATGGAT 60.118 47.826 0.00 0.00 0.00 3.41
4697 10883 2.234661 CCAGACTAGAGCACAACATGGA 59.765 50.000 0.00 0.00 0.00 3.41
4698 10884 2.625737 CCAGACTAGAGCACAACATGG 58.374 52.381 0.00 0.00 0.00 3.66
4699 10885 2.625737 CCCAGACTAGAGCACAACATG 58.374 52.381 0.00 0.00 0.00 3.21
4700 10886 1.065854 GCCCAGACTAGAGCACAACAT 60.066 52.381 0.00 0.00 0.00 2.71
4701 10887 0.321671 GCCCAGACTAGAGCACAACA 59.678 55.000 0.00 0.00 0.00 3.33
4702 10888 0.391793 GGCCCAGACTAGAGCACAAC 60.392 60.000 0.00 0.00 0.00 3.32
4703 10889 0.545309 AGGCCCAGACTAGAGCACAA 60.545 55.000 0.00 0.00 0.00 3.33
4704 10890 0.545309 AAGGCCCAGACTAGAGCACA 60.545 55.000 0.00 0.00 0.00 4.57
4705 10891 0.176910 GAAGGCCCAGACTAGAGCAC 59.823 60.000 0.00 0.00 0.00 4.40
4706 10892 1.323271 CGAAGGCCCAGACTAGAGCA 61.323 60.000 0.00 0.00 0.00 4.26
4707 10893 1.324005 ACGAAGGCCCAGACTAGAGC 61.324 60.000 0.00 0.00 0.00 4.09
4708 10894 0.457851 CACGAAGGCCCAGACTAGAG 59.542 60.000 0.00 0.00 0.00 2.43
4709 10895 0.039180 TCACGAAGGCCCAGACTAGA 59.961 55.000 0.00 0.00 0.00 2.43
4710 10896 0.895530 TTCACGAAGGCCCAGACTAG 59.104 55.000 0.00 0.00 0.00 2.57
4711 10897 0.895530 CTTCACGAAGGCCCAGACTA 59.104 55.000 0.00 0.00 34.87 2.59
4712 10898 0.832135 TCTTCACGAAGGCCCAGACT 60.832 55.000 0.00 0.00 38.88 3.24
4713 10899 0.034896 TTCTTCACGAAGGCCCAGAC 59.965 55.000 0.00 0.00 38.88 3.51
4714 10900 0.321671 CTTCTTCACGAAGGCCCAGA 59.678 55.000 0.00 0.00 44.37 3.86
4715 10901 2.846371 CTTCTTCACGAAGGCCCAG 58.154 57.895 0.00 0.00 44.37 4.45
4722 10908 1.402456 GCTAGCGGACTTCTTCACGAA 60.402 52.381 0.00 0.00 0.00 3.85
4723 10909 0.170561 GCTAGCGGACTTCTTCACGA 59.829 55.000 0.00 0.00 0.00 4.35
4724 10910 0.171455 AGCTAGCGGACTTCTTCACG 59.829 55.000 9.55 0.00 0.00 4.35
4725 10911 1.067495 ACAGCTAGCGGACTTCTTCAC 60.067 52.381 22.16 0.00 0.00 3.18
4726 10912 1.257743 ACAGCTAGCGGACTTCTTCA 58.742 50.000 22.16 0.00 0.00 3.02
4727 10913 3.505464 TTACAGCTAGCGGACTTCTTC 57.495 47.619 22.16 0.00 0.00 2.87
4728 10914 4.081642 TGAATTACAGCTAGCGGACTTCTT 60.082 41.667 22.16 7.15 0.00 2.52
4729 10915 3.447586 TGAATTACAGCTAGCGGACTTCT 59.552 43.478 22.16 0.82 0.00 2.85
4730 10916 3.782046 TGAATTACAGCTAGCGGACTTC 58.218 45.455 22.16 18.10 0.00 3.01
4731 10917 3.447586 TCTGAATTACAGCTAGCGGACTT 59.552 43.478 22.16 10.82 45.38 3.01
4732 10918 3.024547 TCTGAATTACAGCTAGCGGACT 58.975 45.455 22.16 2.38 45.38 3.85
4733 10919 3.438297 TCTGAATTACAGCTAGCGGAC 57.562 47.619 22.16 7.62 45.38 4.79
4734 10920 3.181475 CCTTCTGAATTACAGCTAGCGGA 60.181 47.826 22.16 4.53 45.38 5.54
4735 10921 3.126831 CCTTCTGAATTACAGCTAGCGG 58.873 50.000 13.69 13.69 45.38 5.52
4736 10922 2.541762 GCCTTCTGAATTACAGCTAGCG 59.458 50.000 9.55 7.05 45.38 4.26
4737 10923 3.311048 GTGCCTTCTGAATTACAGCTAGC 59.689 47.826 6.62 6.62 45.38 3.42
4738 10924 4.507710 TGTGCCTTCTGAATTACAGCTAG 58.492 43.478 0.00 0.00 45.38 3.42
4739 10925 4.551702 TGTGCCTTCTGAATTACAGCTA 57.448 40.909 0.00 0.00 45.38 3.32
4740 10926 3.423539 TGTGCCTTCTGAATTACAGCT 57.576 42.857 0.00 0.00 45.38 4.24
4741 10927 4.260375 CGTATGTGCCTTCTGAATTACAGC 60.260 45.833 0.00 0.00 45.38 4.40
4742 10928 4.271049 CCGTATGTGCCTTCTGAATTACAG 59.729 45.833 0.00 0.00 46.97 2.74
4743 10929 4.081365 TCCGTATGTGCCTTCTGAATTACA 60.081 41.667 0.00 0.00 0.00 2.41
4744 10930 4.439057 TCCGTATGTGCCTTCTGAATTAC 58.561 43.478 0.00 0.00 0.00 1.89
4745 10931 4.746535 TCCGTATGTGCCTTCTGAATTA 57.253 40.909 0.00 0.00 0.00 1.40
4746 10932 3.627395 TCCGTATGTGCCTTCTGAATT 57.373 42.857 0.00 0.00 0.00 2.17
4747 10933 3.197766 TCTTCCGTATGTGCCTTCTGAAT 59.802 43.478 0.00 0.00 0.00 2.57
4748 10934 2.565391 TCTTCCGTATGTGCCTTCTGAA 59.435 45.455 0.00 0.00 0.00 3.02
4749 10935 2.166459 CTCTTCCGTATGTGCCTTCTGA 59.834 50.000 0.00 0.00 0.00 3.27
4750 10936 2.544685 CTCTTCCGTATGTGCCTTCTG 58.455 52.381 0.00 0.00 0.00 3.02
4751 10937 1.134670 GCTCTTCCGTATGTGCCTTCT 60.135 52.381 0.00 0.00 0.00 2.85
4752 10938 1.291132 GCTCTTCCGTATGTGCCTTC 58.709 55.000 0.00 0.00 0.00 3.46
4753 10939 0.613260 TGCTCTTCCGTATGTGCCTT 59.387 50.000 0.00 0.00 0.00 4.35
4754 10940 0.613260 TTGCTCTTCCGTATGTGCCT 59.387 50.000 0.00 0.00 0.00 4.75
4755 10941 0.727398 GTTGCTCTTCCGTATGTGCC 59.273 55.000 0.00 0.00 0.00 5.01
4756 10942 1.438651 TGTTGCTCTTCCGTATGTGC 58.561 50.000 0.00 0.00 0.00 4.57
4757 10943 2.805671 TGTTGTTGCTCTTCCGTATGTG 59.194 45.455 0.00 0.00 0.00 3.21
4758 10944 3.120321 TGTTGTTGCTCTTCCGTATGT 57.880 42.857 0.00 0.00 0.00 2.29
4759 10945 3.684305 TCATGTTGTTGCTCTTCCGTATG 59.316 43.478 0.00 0.00 0.00 2.39
4760 10946 3.937814 TCATGTTGTTGCTCTTCCGTAT 58.062 40.909 0.00 0.00 0.00 3.06
4761 10947 3.394674 TCATGTTGTTGCTCTTCCGTA 57.605 42.857 0.00 0.00 0.00 4.02
4762 10948 2.254546 TCATGTTGTTGCTCTTCCGT 57.745 45.000 0.00 0.00 0.00 4.69
4763 10949 2.096496 GGATCATGTTGTTGCTCTTCCG 59.904 50.000 0.00 0.00 0.00 4.30
4764 10950 3.128242 CAGGATCATGTTGTTGCTCTTCC 59.872 47.826 0.00 0.00 0.00 3.46
4765 10951 3.427233 GCAGGATCATGTTGTTGCTCTTC 60.427 47.826 9.42 0.00 0.00 2.87
4766 10952 2.490903 GCAGGATCATGTTGTTGCTCTT 59.509 45.455 9.42 0.00 0.00 2.85
4767 10953 2.089980 GCAGGATCATGTTGTTGCTCT 58.910 47.619 9.42 0.00 0.00 4.09
4768 10954 1.814394 TGCAGGATCATGTTGTTGCTC 59.186 47.619 9.42 0.00 33.00 4.26
4769 10955 1.542915 GTGCAGGATCATGTTGTTGCT 59.457 47.619 9.42 0.00 33.00 3.91
4770 10956 1.270274 TGTGCAGGATCATGTTGTTGC 59.730 47.619 9.42 0.49 0.00 4.17
4771 10957 2.670229 GCTGTGCAGGATCATGTTGTTG 60.670 50.000 9.42 0.00 0.00 3.33
4772 10958 1.542915 GCTGTGCAGGATCATGTTGTT 59.457 47.619 9.42 0.00 0.00 2.83
4773 10959 1.171308 GCTGTGCAGGATCATGTTGT 58.829 50.000 9.42 0.00 0.00 3.32
4774 10960 1.170442 TGCTGTGCAGGATCATGTTG 58.830 50.000 9.42 0.00 33.32 3.33
4775 10961 3.656457 TGCTGTGCAGGATCATGTT 57.344 47.368 9.42 0.00 33.32 2.71
4787 10973 4.610890 TTTGTGCGCGCTGCTGTG 62.611 61.111 33.29 0.00 46.63 3.66
4788 10974 4.318021 CTTTGTGCGCGCTGCTGT 62.318 61.111 33.29 0.00 46.63 4.40
4789 10975 2.987213 TTTCTTTGTGCGCGCTGCTG 62.987 55.000 33.29 17.70 46.63 4.41
4790 10976 2.722130 CTTTCTTTGTGCGCGCTGCT 62.722 55.000 33.29 0.00 46.63 4.24
4791 10977 2.353376 TTTCTTTGTGCGCGCTGC 60.353 55.556 33.29 24.16 46.70 5.25
4792 10978 2.359791 GCTTTCTTTGTGCGCGCTG 61.360 57.895 33.29 16.28 0.00 5.18
4793 10979 2.050985 GCTTTCTTTGTGCGCGCT 60.051 55.556 33.29 0.00 0.00 5.92
4794 10980 1.668253 GATGCTTTCTTTGTGCGCGC 61.668 55.000 27.26 27.26 0.00 6.86
4795 10981 0.385849 TGATGCTTTCTTTGTGCGCG 60.386 50.000 0.00 0.00 0.00 6.86
4796 10982 1.453148 GTTGATGCTTTCTTTGTGCGC 59.547 47.619 0.00 0.00 0.00 6.09
4797 10983 2.468777 GTGTTGATGCTTTCTTTGTGCG 59.531 45.455 0.00 0.00 0.00 5.34
4798 10984 2.796593 GGTGTTGATGCTTTCTTTGTGC 59.203 45.455 0.00 0.00 0.00 4.57
4799 10985 4.044336 TGGTGTTGATGCTTTCTTTGTG 57.956 40.909 0.00 0.00 0.00 3.33
4800 10986 4.734398 TTGGTGTTGATGCTTTCTTTGT 57.266 36.364 0.00 0.00 0.00 2.83
4801 10987 6.183360 GCATATTGGTGTTGATGCTTTCTTTG 60.183 38.462 0.00 0.00 41.19 2.77
4802 10988 5.870978 GCATATTGGTGTTGATGCTTTCTTT 59.129 36.000 0.00 0.00 41.19 2.52
4803 10989 5.413499 GCATATTGGTGTTGATGCTTTCTT 58.587 37.500 0.00 0.00 41.19 2.52
4804 10990 5.002464 GCATATTGGTGTTGATGCTTTCT 57.998 39.130 0.00 0.00 41.19 2.52
4809 10995 3.450578 CCAAGCATATTGGTGTTGATGC 58.549 45.455 0.00 0.00 44.05 3.91
4834 11020 2.045926 ACCCCGTGAAGCATGAGC 60.046 61.111 0.00 0.00 42.56 4.26
4835 11021 1.450312 GGACCCCGTGAAGCATGAG 60.450 63.158 0.00 0.00 0.00 2.90
4836 11022 2.668632 GGACCCCGTGAAGCATGA 59.331 61.111 0.00 0.00 0.00 3.07
4837 11023 2.438434 GGGACCCCGTGAAGCATG 60.438 66.667 0.00 0.00 0.00 4.06
4848 11034 4.944372 CAGTATCGCGCGGGACCC 62.944 72.222 31.69 20.35 0.00 4.46
4849 11035 1.859427 TATCAGTATCGCGCGGGACC 61.859 60.000 31.69 20.72 0.00 4.46
4850 11036 0.454620 CTATCAGTATCGCGCGGGAC 60.455 60.000 31.69 26.14 0.00 4.46
4851 11037 1.873863 CTATCAGTATCGCGCGGGA 59.126 57.895 31.69 28.58 0.00 5.14
4852 11038 1.801913 GCTATCAGTATCGCGCGGG 60.802 63.158 31.69 18.21 0.00 6.13
4853 11039 1.081442 TGCTATCAGTATCGCGCGG 60.081 57.895 31.69 13.80 0.00 6.46
4854 11040 1.337817 GGTGCTATCAGTATCGCGCG 61.338 60.000 26.76 26.76 35.67 6.86
4855 11041 0.039074 AGGTGCTATCAGTATCGCGC 60.039 55.000 0.00 0.00 34.46 6.86
4856 11042 1.001268 ACAGGTGCTATCAGTATCGCG 60.001 52.381 0.00 0.00 0.00 5.87
4857 11043 2.802787 ACAGGTGCTATCAGTATCGC 57.197 50.000 0.00 0.00 0.00 4.58
4858 11044 4.276183 ACAGTACAGGTGCTATCAGTATCG 59.724 45.833 0.00 0.00 0.00 2.92
4859 11045 5.533154 AGACAGTACAGGTGCTATCAGTATC 59.467 44.000 0.00 0.00 0.00 2.24
4860 11046 5.300539 CAGACAGTACAGGTGCTATCAGTAT 59.699 44.000 0.00 0.00 0.00 2.12
4861 11047 4.640647 CAGACAGTACAGGTGCTATCAGTA 59.359 45.833 0.00 0.00 0.00 2.74
4862 11048 3.445450 CAGACAGTACAGGTGCTATCAGT 59.555 47.826 0.00 0.00 0.00 3.41
4863 11049 3.696548 TCAGACAGTACAGGTGCTATCAG 59.303 47.826 0.00 0.00 0.00 2.90
4864 11050 3.444034 GTCAGACAGTACAGGTGCTATCA 59.556 47.826 0.00 0.00 0.00 2.15
4865 11051 3.444034 TGTCAGACAGTACAGGTGCTATC 59.556 47.826 0.00 0.00 0.00 2.08
4866 11052 3.431415 TGTCAGACAGTACAGGTGCTAT 58.569 45.455 0.00 0.00 0.00 2.97
4867 11053 2.820197 CTGTCAGACAGTACAGGTGCTA 59.180 50.000 21.00 0.00 41.19 3.49
4868 11054 1.615883 CTGTCAGACAGTACAGGTGCT 59.384 52.381 21.00 0.00 41.19 4.40
4869 11055 2.071688 CTGTCAGACAGTACAGGTGC 57.928 55.000 21.00 0.00 41.19 5.01
4873 11059 2.887783 ACACTCCTGTCAGACAGTACAG 59.112 50.000 25.88 20.03 44.50 2.74
4874 11060 2.945456 ACACTCCTGTCAGACAGTACA 58.055 47.619 25.88 10.92 44.50 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.