Multiple sequence alignment - TraesCS5D01G096400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G096400 chr5D 100.000 4509 0 0 1 4509 106685630 106681122 0.000000e+00 8327.0
1 TraesCS5D01G096400 chr5D 78.929 560 87 10 202 732 495372197 495372754 7.180000e-93 351.0
2 TraesCS5D01G096400 chr5D 98.780 164 2 0 4346 4509 407766848 407766685 4.410000e-75 292.0
3 TraesCS5D01G096400 chr5D 98.780 164 2 0 4346 4509 407772215 407772052 4.410000e-75 292.0
4 TraesCS5D01G096400 chr5D 98.788 165 1 1 4346 4509 493821603 493821439 4.410000e-75 292.0
5 TraesCS5D01G096400 chr5D 85.393 178 26 0 1364 1541 106817815 106817638 7.700000e-43 185.0
6 TraesCS5D01G096400 chr5D 78.694 291 48 7 452 739 34244310 34244031 9.960000e-42 182.0
7 TraesCS5D01G096400 chr5D 84.795 171 26 0 559 729 564009078 564008908 6.000000e-39 172.0
8 TraesCS5D01G096400 chr5D 75.191 262 55 9 470 725 81260784 81260527 1.020000e-21 115.0
9 TraesCS5D01G096400 chr5A 89.503 3887 223 77 1 3739 109939301 109943150 0.000000e+00 4747.0
10 TraesCS5D01G096400 chr5A 82.669 502 63 17 3751 4232 109948238 109948735 1.500000e-114 424.0
11 TraesCS5D01G096400 chr5A 91.045 201 18 0 1 201 657100799 657100999 5.750000e-69 272.0
12 TraesCS5D01G096400 chr5A 85.654 237 29 4 204 437 632998519 632998285 1.250000e-60 244.0
13 TraesCS5D01G096400 chr5A 79.076 368 55 15 1185 1541 109928834 109929190 2.710000e-57 233.0
14 TraesCS5D01G096400 chr5A 87.500 96 5 5 4226 4319 109948774 109948864 2.220000e-18 104.0
15 TraesCS5D01G096400 chr5B 90.344 1336 59 29 1926 3212 115383374 115384688 0.000000e+00 1688.0
16 TraesCS5D01G096400 chr5B 86.293 1036 60 31 937 1937 115375736 115376724 0.000000e+00 1051.0
17 TraesCS5D01G096400 chr5B 90.744 497 25 11 3246 3739 115388118 115388596 1.060000e-180 643.0
18 TraesCS5D01G096400 chr5B 83.986 562 40 16 3751 4281 115394123 115394665 1.130000e-135 494.0
19 TraesCS5D01G096400 chr5B 88.667 150 5 3 801 940 115372345 115372492 6.000000e-39 172.0
20 TraesCS5D01G096400 chr5B 86.667 75 10 0 3600 3674 527146654 527146728 2.890000e-12 84.2
21 TraesCS5D01G096400 chr5B 100.000 29 0 0 770 798 115372289 115372317 2.000000e-03 54.7
22 TraesCS5D01G096400 chr7D 80.250 719 92 26 1 673 172264959 172265673 3.130000e-136 496.0
23 TraesCS5D01G096400 chr7D 98.802 167 2 0 4343 4509 575781565 575781399 9.480000e-77 298.0
24 TraesCS5D01G096400 chr7D 79.755 163 21 7 3590 3741 544987475 544987636 1.720000e-19 108.0
25 TraesCS5D01G096400 chr3B 78.005 782 113 23 1 727 27992225 27991448 1.930000e-118 436.0
26 TraesCS5D01G096400 chr3B 86.920 237 27 4 202 436 680730300 680730066 3.460000e-66 263.0
27 TraesCS5D01G096400 chr1B 78.340 711 99 24 4 661 62803099 62803807 4.200000e-110 409.0
28 TraesCS5D01G096400 chr1B 76.305 498 89 20 204 675 46963750 46963256 5.830000e-59 239.0
29 TraesCS5D01G096400 chr1B 78.395 162 24 5 3591 3741 52554037 52554198 1.340000e-15 95.3
30 TraesCS5D01G096400 chr1D 79.533 557 82 14 202 729 8462156 8462709 7.130000e-98 368.0
31 TraesCS5D01G096400 chr1D 90.547 201 19 0 1 201 341180912 341181112 2.670000e-67 267.0
32 TraesCS5D01G096400 chr1D 78.022 273 51 5 457 729 38672355 38672618 3.610000e-36 163.0
33 TraesCS5D01G096400 chr1D 89.091 55 6 0 3687 3741 439110168 439110114 8.090000e-08 69.4
34 TraesCS5D01G096400 chr1A 82.237 456 49 21 6 430 547305347 547304893 9.220000e-97 364.0
35 TraesCS5D01G096400 chr1A 89.706 204 18 1 1 204 549489294 549489494 1.610000e-64 257.0
36 TraesCS5D01G096400 chr1A 87.209 86 11 0 3589 3674 111157986 111157901 1.030000e-16 99.0
37 TraesCS5D01G096400 chr3D 78.843 553 88 16 202 732 346955003 346954458 3.340000e-91 346.0
38 TraesCS5D01G096400 chr3D 98.788 165 2 0 4345 4509 553873161 553873325 1.230000e-75 294.0
39 TraesCS5D01G096400 chr3D 98.182 165 2 1 4346 4509 31878450 31878614 2.050000e-73 287.0
40 TraesCS5D01G096400 chr3D 89.706 204 21 0 1 204 312885469 312885266 1.240000e-65 261.0
41 TraesCS5D01G096400 chr3D 79.699 133 17 6 3619 3741 416195161 416195029 2.230000e-13 87.9
42 TraesCS5D01G096400 chr6D 98.182 165 2 1 4346 4509 45915536 45915372 2.050000e-73 287.0
43 TraesCS5D01G096400 chr6D 98.182 165 2 1 4346 4509 448374580 448374416 2.050000e-73 287.0
44 TraesCS5D01G096400 chr6D 82.184 174 29 2 559 731 431841237 431841409 1.010000e-31 148.0
45 TraesCS5D01G096400 chr6D 72.166 697 106 52 16 632 372874490 372875178 1.020000e-26 132.0
46 TraesCS5D01G096400 chr4D 97.619 168 3 1 4343 4509 71533038 71533205 2.050000e-73 287.0
47 TraesCS5D01G096400 chr6B 84.262 305 30 8 1 293 645507836 645507538 9.550000e-72 281.0
48 TraesCS5D01G096400 chr6B 80.247 162 22 6 3589 3741 578059136 578059296 3.690000e-21 113.0
49 TraesCS5D01G096400 chr6B 81.609 87 16 0 458 544 2462522 2462608 6.260000e-09 73.1
50 TraesCS5D01G096400 chr6B 85.507 69 10 0 453 521 125335361 125335429 6.260000e-09 73.1
51 TraesCS5D01G096400 chrUn 77.980 495 72 21 213 673 305276274 305276765 4.440000e-70 276.0
52 TraesCS5D01G096400 chr2B 89.268 205 20 2 1 204 640768848 640769051 5.790000e-64 255.0
53 TraesCS5D01G096400 chr2B 74.800 250 38 13 3908 4139 788036438 788036680 6.210000e-14 89.8
54 TraesCS5D01G096400 chr2B 86.667 75 10 0 3600 3674 690989867 690989793 2.890000e-12 84.2
55 TraesCS5D01G096400 chr7A 88.235 204 24 0 1 204 162947524 162947321 1.250000e-60 244.0
56 TraesCS5D01G096400 chr7A 87.805 82 7 3 3595 3674 642178238 642178158 4.800000e-15 93.5
57 TraesCS5D01G096400 chr4A 79.675 369 47 13 207 551 595292442 595292078 1.620000e-59 241.0
58 TraesCS5D01G096400 chr4A 80.000 140 23 4 3912 4050 490587957 490587822 1.030000e-16 99.0
59 TraesCS5D01G096400 chr4B 97.778 90 2 0 1095 1184 364229839 364229928 6.040000e-34 156.0
60 TraesCS5D01G096400 chr4B 82.353 170 26 4 456 622 369269981 369269813 1.310000e-30 145.0
61 TraesCS5D01G096400 chr6A 75.725 276 58 9 457 727 317598980 317599251 3.660000e-26 130.0
62 TraesCS5D01G096400 chr6A 82.716 81 10 3 3595 3675 116860599 116860675 8.090000e-08 69.4
63 TraesCS5D01G096400 chr7B 78.947 152 23 7 3596 3741 641136594 641136742 1.340000e-15 95.3
64 TraesCS5D01G096400 chr7B 85.714 77 11 0 3595 3671 40397023 40397099 1.040000e-11 82.4
65 TraesCS5D01G096400 chr2D 85.714 84 11 1 3944 4027 316179798 316179880 2.230000e-13 87.9
66 TraesCS5D01G096400 chr3A 100.000 28 0 0 3714 3741 723603426 723603399 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G096400 chr5D 106681122 106685630 4508 True 8327.0 8327 100.000000 1 4509 1 chr5D.!!$R3 4508
1 TraesCS5D01G096400 chr5D 495372197 495372754 557 False 351.0 351 78.929000 202 732 1 chr5D.!!$F1 530
2 TraesCS5D01G096400 chr5A 109939301 109943150 3849 False 4747.0 4747 89.503000 1 3739 1 chr5A.!!$F2 3738
3 TraesCS5D01G096400 chr5A 109948238 109948864 626 False 264.0 424 85.084500 3751 4319 2 chr5A.!!$F4 568
4 TraesCS5D01G096400 chr5B 115383374 115388596 5222 False 1165.5 1688 90.544000 1926 3739 2 chr5B.!!$F4 1813
5 TraesCS5D01G096400 chr5B 115394123 115394665 542 False 494.0 494 83.986000 3751 4281 1 chr5B.!!$F1 530
6 TraesCS5D01G096400 chr5B 115372289 115376724 4435 False 425.9 1051 91.653333 770 1937 3 chr5B.!!$F3 1167
7 TraesCS5D01G096400 chr7D 172264959 172265673 714 False 496.0 496 80.250000 1 673 1 chr7D.!!$F1 672
8 TraesCS5D01G096400 chr3B 27991448 27992225 777 True 436.0 436 78.005000 1 727 1 chr3B.!!$R1 726
9 TraesCS5D01G096400 chr1B 62803099 62803807 708 False 409.0 409 78.340000 4 661 1 chr1B.!!$F2 657
10 TraesCS5D01G096400 chr1D 8462156 8462709 553 False 368.0 368 79.533000 202 729 1 chr1D.!!$F1 527
11 TraesCS5D01G096400 chr3D 346954458 346955003 545 True 346.0 346 78.843000 202 732 1 chr3D.!!$R2 530

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
444 488 0.175302 TTAAATAGTCGGGCGGCGAA 59.825 50.0 12.98 0.00 0.00 4.7 F
2038 5479 0.165944 ACGCAGGTACGTACGTGTAC 59.834 55.0 35.42 24.35 46.19 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2363 5829 0.601311 GCCGTCTGTTTCTGCTCTGT 60.601 55.0 0.0 0.0 0.0 3.41 R
3728 10630 0.535102 GGGACAAGGTGCGGATATGG 60.535 60.0 0.0 0.0 0.0 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
226 254 4.147449 CAGCCCGACAGCGATGGA 62.147 66.667 5.32 0.00 40.82 3.41
304 333 1.767289 CATAGCGTACGTGGTGATCC 58.233 55.000 17.90 0.00 0.00 3.36
444 488 0.175302 TTAAATAGTCGGGCGGCGAA 59.825 50.000 12.98 0.00 0.00 4.70
528 582 3.000819 TCCGCGTGGGACTCCATT 61.001 61.111 16.49 0.00 46.09 3.16
533 587 0.605319 GCGTGGGACTCCATTGTCAA 60.605 55.000 0.00 0.00 46.09 3.18
536 590 2.355108 CGTGGGACTCCATTGTCAATCT 60.355 50.000 0.00 0.00 46.09 2.40
581 661 3.373001 CCCATATCCGCCCCATATTTGAT 60.373 47.826 0.00 0.00 0.00 2.57
592 672 9.354673 CCGCCCCATATTTGATTTAGATATTAT 57.645 33.333 0.00 0.00 0.00 1.28
628 709 1.658114 GGTGTTTGAGGCCCGTTTC 59.342 57.895 0.00 0.00 0.00 2.78
661 742 1.548269 GGGCCAAAATTTCATGACCGA 59.452 47.619 4.39 0.00 0.00 4.69
828 937 2.102252 GACCTCATCTGGTGATCTGGAC 59.898 54.545 2.05 0.00 41.00 4.02
923 1046 6.526526 AGTGGAAAGAGAGTAGTTTTCTTCC 58.473 40.000 0.00 0.00 32.74 3.46
924 1047 6.327887 AGTGGAAAGAGAGTAGTTTTCTTCCT 59.672 38.462 0.00 0.00 32.74 3.36
925 1048 6.647481 GTGGAAAGAGAGTAGTTTTCTTCCTC 59.353 42.308 0.00 0.00 32.74 3.71
926 1049 6.167685 GGAAAGAGAGTAGTTTTCTTCCTCC 58.832 44.000 0.00 1.82 32.74 4.30
927 1050 5.748670 AAGAGAGTAGTTTTCTTCCTCCC 57.251 43.478 0.00 0.00 31.38 4.30
928 1051 5.018374 AGAGAGTAGTTTTCTTCCTCCCT 57.982 43.478 0.00 0.00 31.38 4.20
960 4334 6.943718 CCTTATAAGCAGAGTACCTAGCTAGT 59.056 42.308 19.31 10.02 36.07 2.57
1069 4453 3.208594 TCTAGCTAGTATTTCGGCGTGA 58.791 45.455 20.10 0.00 0.00 4.35
1083 4467 4.178861 GTGATTACACGGCGAGCA 57.821 55.556 16.62 0.00 37.28 4.26
1112 4496 4.431131 CGGGTGGCAATGGGCTCT 62.431 66.667 0.00 0.00 44.01 4.09
1312 4696 1.954146 CCTGACGTGTGTTCCGGTG 60.954 63.158 0.00 0.00 0.00 4.94
1326 4710 1.599518 CGGTGGTACCAAAGCTGCA 60.600 57.895 18.31 0.00 38.47 4.41
1328 4712 1.581447 GTGGTACCAAAGCTGCAGC 59.419 57.895 31.53 31.53 42.49 5.25
1560 4955 4.778143 ACGATGGTGCCGGCTTCC 62.778 66.667 29.70 27.73 0.00 3.46
1607 5002 2.359478 GTGGGTTGGCCAGGTACG 60.359 66.667 5.11 0.00 36.17 3.67
1616 5011 0.893447 GGCCAGGTACGTAGTTGACT 59.107 55.000 0.00 0.00 37.78 3.41
1648 5063 7.126726 GCATAGTACTGCTCCTTAATCAATG 57.873 40.000 5.39 0.00 39.12 2.82
1649 5064 6.148480 GCATAGTACTGCTCCTTAATCAATGG 59.852 42.308 5.39 0.00 39.12 3.16
1650 5065 5.700402 AGTACTGCTCCTTAATCAATGGT 57.300 39.130 0.00 0.00 0.00 3.55
1651 5066 6.067217 AGTACTGCTCCTTAATCAATGGTT 57.933 37.500 0.00 0.00 0.00 3.67
1652 5067 6.116126 AGTACTGCTCCTTAATCAATGGTTC 58.884 40.000 0.00 0.00 0.00 3.62
1653 5068 4.922206 ACTGCTCCTTAATCAATGGTTCA 58.078 39.130 0.00 0.00 0.00 3.18
1654 5069 4.702131 ACTGCTCCTTAATCAATGGTTCAC 59.298 41.667 0.00 0.00 0.00 3.18
1655 5070 3.689161 TGCTCCTTAATCAATGGTTCACG 59.311 43.478 0.00 0.00 0.00 4.35
1656 5071 3.689649 GCTCCTTAATCAATGGTTCACGT 59.310 43.478 0.00 0.00 0.00 4.49
1657 5072 4.156008 GCTCCTTAATCAATGGTTCACGTT 59.844 41.667 0.00 0.00 0.00 3.99
1658 5073 5.335661 GCTCCTTAATCAATGGTTCACGTTT 60.336 40.000 0.00 0.00 0.00 3.60
1659 5074 6.642707 TCCTTAATCAATGGTTCACGTTTT 57.357 33.333 0.00 0.00 0.00 2.43
1660 5075 7.574217 GCTCCTTAATCAATGGTTCACGTTTTA 60.574 37.037 0.00 0.00 0.00 1.52
1661 5076 7.586747 TCCTTAATCAATGGTTCACGTTTTAC 58.413 34.615 0.00 0.00 0.00 2.01
1662 5077 7.446013 TCCTTAATCAATGGTTCACGTTTTACT 59.554 33.333 0.00 0.00 0.00 2.24
1663 5078 8.079809 CCTTAATCAATGGTTCACGTTTTACTT 58.920 33.333 0.00 0.00 0.00 2.24
1664 5079 9.113876 CTTAATCAATGGTTCACGTTTTACTTC 57.886 33.333 0.00 0.00 0.00 3.01
1665 5080 6.627395 ATCAATGGTTCACGTTTTACTTCA 57.373 33.333 0.00 0.00 0.00 3.02
1666 5081 6.627395 TCAATGGTTCACGTTTTACTTCAT 57.373 33.333 0.00 0.00 0.00 2.57
1667 5082 7.731882 TCAATGGTTCACGTTTTACTTCATA 57.268 32.000 0.00 0.00 0.00 2.15
1668 5083 8.155821 TCAATGGTTCACGTTTTACTTCATAA 57.844 30.769 0.00 0.00 0.00 1.90
1680 5095 9.619316 CGTTTTACTTCATAAAAATCATGTGGA 57.381 29.630 0.00 0.00 42.94 4.02
1738 5153 7.713764 TTGATCATGTTCATGTATACCTTCG 57.286 36.000 7.29 0.00 0.00 3.79
1808 5249 7.134815 GCAAGAACACTTGTTATAGCATATGG 58.865 38.462 4.56 0.00 41.85 2.74
1868 5309 1.285280 TCGGATGTGAATGGACCCTT 58.715 50.000 0.00 0.00 0.00 3.95
1885 5326 3.070015 ACCCTTGGAAATTTTGCTGACTG 59.930 43.478 2.25 0.00 0.00 3.51
1886 5327 3.555586 CCCTTGGAAATTTTGCTGACTGG 60.556 47.826 2.25 0.00 0.00 4.00
1916 5357 1.396996 CCTATTTCGTTTCAGGGCACG 59.603 52.381 0.00 0.00 37.77 5.34
2032 5473 1.952266 GCAAGCACGCAGGTACGTAC 61.952 60.000 17.56 17.56 46.34 3.67
2038 5479 0.165944 ACGCAGGTACGTACGTGTAC 59.834 55.000 35.42 24.35 46.19 2.90
2050 5493 7.908082 GGTACGTACGTGTACATTATAAGTTCA 59.092 37.037 30.25 1.04 45.16 3.18
2051 5494 9.438291 GTACGTACGTGTACATTATAAGTTCAT 57.562 33.333 30.25 0.00 43.32 2.57
2081 5524 2.665794 GCGCTAGCTTTGTTGGAGAAAC 60.666 50.000 13.93 0.00 41.01 2.78
2101 5544 9.346725 GAGAAACTTTGGTTGAAATGTATCATC 57.653 33.333 0.00 0.00 35.63 2.92
2110 5555 9.546428 TGGTTGAAATGTATCATCTATGTACTG 57.454 33.333 0.00 0.00 0.00 2.74
2179 5624 2.749621 GTGCTGGGAAATGACAAGGTAG 59.250 50.000 0.00 0.00 0.00 3.18
2180 5625 2.375174 TGCTGGGAAATGACAAGGTAGT 59.625 45.455 0.00 0.00 0.00 2.73
2369 5835 3.446873 TCCAGAAGAGATGAGAACAGAGC 59.553 47.826 0.00 0.00 0.00 4.09
2374 5840 5.245751 AGAAGAGATGAGAACAGAGCAGAAA 59.754 40.000 0.00 0.00 0.00 2.52
2425 5891 2.554775 TCGCTGACACGTCGAGAC 59.445 61.111 0.00 0.00 0.00 3.36
2475 5941 2.489275 GCTCCTCCTCGCTCCTCTG 61.489 68.421 0.00 0.00 0.00 3.35
2537 6003 4.213482 AGCATCTCGTTTGGTTTTCTACAC 59.787 41.667 0.00 0.00 0.00 2.90
2540 6006 3.798337 TCTCGTTTGGTTTTCTACACGTC 59.202 43.478 0.00 0.00 0.00 4.34
2547 6037 3.177487 GGTTTTCTACACGTCGAGATCC 58.823 50.000 0.00 0.00 0.00 3.36
2563 6053 6.090088 GTCGAGATCCAGCACAATATGTTATC 59.910 42.308 0.00 0.00 0.00 1.75
2584 6074 8.495148 GTTATCAACAATGTTTGGTTTGGATTC 58.505 33.333 0.00 0.00 34.12 2.52
2666 6156 3.626924 GGGGCGATGGCGGTCTAT 61.627 66.667 0.00 0.00 41.24 1.98
2721 6212 5.414360 CACCACCAATCCGATATATCTCAG 58.586 45.833 10.93 0.28 0.00 3.35
2729 6220 7.330454 CCAATCCGATATATCTCAGTTGACAAG 59.670 40.741 10.93 0.00 0.00 3.16
2731 6222 6.971602 TCCGATATATCTCAGTTGACAAGAC 58.028 40.000 10.93 0.00 0.00 3.01
2753 6244 3.751175 CACCATGCTTTTTCGAGGTCTTA 59.249 43.478 0.00 0.00 0.00 2.10
2770 6261 5.420739 AGGTCTTAAGCTAACCTTGAGAGAG 59.579 44.000 8.24 0.00 44.08 3.20
2771 6262 5.419471 GGTCTTAAGCTAACCTTGAGAGAGA 59.581 44.000 0.00 0.00 44.08 3.10
2910 6401 4.429108 GCTGCTCTTTCTCTACAGGTTAG 58.571 47.826 0.00 0.00 0.00 2.34
2912 6403 5.125739 GCTGCTCTTTCTCTACAGGTTAGTA 59.874 44.000 0.00 0.00 0.00 1.82
2913 6404 6.350277 GCTGCTCTTTCTCTACAGGTTAGTAA 60.350 42.308 0.00 0.00 0.00 2.24
2914 6405 7.631811 GCTGCTCTTTCTCTACAGGTTAGTAAT 60.632 40.741 0.00 0.00 0.00 1.89
2925 6416 6.790285 ACAGGTTAGTAATTGTTTACACCG 57.210 37.500 0.00 0.00 38.50 4.94
2977 6468 7.174772 TGCATATAAGTTGTCAACTGTCATTGT 59.825 33.333 18.84 4.19 41.91 2.71
2982 6473 4.699735 AGTTGTCAACTGTCATTGTTGTGA 59.300 37.500 17.49 0.00 43.54 3.58
3152 6653 4.352600 TCGAGAACGACAAGGTATCTTC 57.647 45.455 0.00 0.00 43.81 2.87
3153 6654 3.754850 TCGAGAACGACAAGGTATCTTCA 59.245 43.478 0.00 0.00 43.81 3.02
3169 6670 8.057623 AGGTATCTTCAGTCAATGATCCATTTT 58.942 33.333 0.00 0.00 37.89 1.82
3170 6671 8.689972 GGTATCTTCAGTCAATGATCCATTTTT 58.310 33.333 0.00 0.00 37.89 1.94
3206 6708 9.733219 GACGAAGCTGAAAAGTAGTACTAATAT 57.267 33.333 3.61 0.00 0.00 1.28
3207 6709 9.517609 ACGAAGCTGAAAAGTAGTACTAATATG 57.482 33.333 3.61 0.00 0.00 1.78
3208 6710 9.517609 CGAAGCTGAAAAGTAGTACTAATATGT 57.482 33.333 3.61 0.00 0.00 2.29
3436 10333 1.961277 CTCCGCGGCTTTGTGAGTT 60.961 57.895 23.51 0.00 0.00 3.01
3437 10334 0.669318 CTCCGCGGCTTTGTGAGTTA 60.669 55.000 23.51 0.00 0.00 2.24
3438 10335 0.036765 TCCGCGGCTTTGTGAGTTAT 60.037 50.000 23.51 0.00 0.00 1.89
3439 10336 0.373716 CCGCGGCTTTGTGAGTTATC 59.626 55.000 14.67 0.00 0.00 1.75
3440 10337 1.075542 CGCGGCTTTGTGAGTTATCA 58.924 50.000 0.00 0.00 0.00 2.15
3441 10338 1.665679 CGCGGCTTTGTGAGTTATCAT 59.334 47.619 0.00 0.00 37.87 2.45
3442 10339 2.863740 CGCGGCTTTGTGAGTTATCATA 59.136 45.455 0.00 0.00 37.87 2.15
3443 10340 3.494626 CGCGGCTTTGTGAGTTATCATAT 59.505 43.478 0.00 0.00 37.87 1.78
3467 10364 0.759346 AGGCGTTGAGGAGACAAACT 59.241 50.000 0.00 0.00 0.00 2.66
3482 10379 8.986991 AGGAGACAAACTGATAGAGATGTAAAT 58.013 33.333 0.00 0.00 0.00 1.40
3483 10380 9.039870 GGAGACAAACTGATAGAGATGTAAATG 57.960 37.037 0.00 0.00 0.00 2.32
3484 10381 8.954950 AGACAAACTGATAGAGATGTAAATGG 57.045 34.615 0.00 0.00 0.00 3.16
3488 10385 6.678568 ACTGATAGAGATGTAAATGGAGGG 57.321 41.667 0.00 0.00 0.00 4.30
3562 10460 8.294577 CGACAAAGGGTAAACTTTTATTAGCTT 58.705 33.333 0.00 0.00 38.56 3.74
3606 10504 9.056005 AGATACAAACATAATTACGATGCACAT 57.944 29.630 0.00 0.00 0.00 3.21
3621 10519 2.228582 TGCACATAGCCAACATCAACAC 59.771 45.455 0.00 0.00 44.83 3.32
3623 10521 3.825308 CACATAGCCAACATCAACACAC 58.175 45.455 0.00 0.00 0.00 3.82
3626 10524 0.662619 AGCCAACATCAACACACACG 59.337 50.000 0.00 0.00 0.00 4.49
3637 10536 1.692296 ACACACACGCACAAAAACAC 58.308 45.000 0.00 0.00 0.00 3.32
3638 10537 1.001268 ACACACACGCACAAAAACACA 60.001 42.857 0.00 0.00 0.00 3.72
3728 10630 8.540492 CCGTGATCTGTAAACTATAACAATGAC 58.460 37.037 0.00 0.00 0.00 3.06
3739 10641 5.932303 ACTATAACAATGACCATATCCGCAC 59.068 40.000 0.00 0.00 0.00 5.34
3740 10642 1.967319 ACAATGACCATATCCGCACC 58.033 50.000 0.00 0.00 0.00 5.01
3741 10643 1.490490 ACAATGACCATATCCGCACCT 59.510 47.619 0.00 0.00 0.00 4.00
3742 10644 2.092429 ACAATGACCATATCCGCACCTT 60.092 45.455 0.00 0.00 0.00 3.50
3743 10645 2.260844 ATGACCATATCCGCACCTTG 57.739 50.000 0.00 0.00 0.00 3.61
3744 10646 0.908910 TGACCATATCCGCACCTTGT 59.091 50.000 0.00 0.00 0.00 3.16
3745 10647 1.134521 TGACCATATCCGCACCTTGTC 60.135 52.381 0.00 0.00 0.00 3.18
3746 10648 0.180406 ACCATATCCGCACCTTGTCC 59.820 55.000 0.00 0.00 0.00 4.02
3747 10649 0.535102 CCATATCCGCACCTTGTCCC 60.535 60.000 0.00 0.00 0.00 4.46
3748 10650 0.469917 CATATCCGCACCTTGTCCCT 59.530 55.000 0.00 0.00 0.00 4.20
3749 10651 0.759346 ATATCCGCACCTTGTCCCTC 59.241 55.000 0.00 0.00 0.00 4.30
3752 10654 2.743928 CGCACCTTGTCCCTCTGC 60.744 66.667 0.00 0.00 0.00 4.26
3804 10706 1.227089 CGTCCCTCTGCCAGATTCG 60.227 63.158 0.00 0.00 0.00 3.34
3840 10742 1.841556 GATCCCCGATGCCACCCTA 60.842 63.158 0.00 0.00 0.00 3.53
3860 10762 2.675371 GGGAAGGTGTAGCCCCAC 59.325 66.667 0.00 0.00 38.69 4.61
3878 10781 3.922366 CCCCCTTCCTGGTTCTGT 58.078 61.111 0.00 0.00 0.00 3.41
3891 10794 3.283751 TGGTTCTGTCCATCGTTTTGTT 58.716 40.909 0.00 0.00 31.96 2.83
3910 10828 5.545063 TGTTTGCCTCATCTCCGATTATA 57.455 39.130 0.00 0.00 0.00 0.98
4006 10924 1.134699 CGATCTACCTTCTTGCAGGCA 60.135 52.381 0.00 0.00 37.47 4.75
4021 10939 3.688159 GCACTGCCAGGGCCTTTG 61.688 66.667 8.02 0.00 39.15 2.77
4028 10946 2.281761 CAGGGCCTTTGTCTGCGT 60.282 61.111 1.32 0.00 0.00 5.24
4080 11008 2.815308 GGATGGCGACGACTCCAT 59.185 61.111 9.14 9.14 43.28 3.41
4083 11011 0.032678 GATGGCGACGACTCCATGAT 59.967 55.000 14.01 0.00 41.05 2.45
4086 11014 0.460284 GGCGACGACTCCATGATGTT 60.460 55.000 0.00 0.00 0.00 2.71
4092 11020 3.997021 GACGACTCCATGATGTTGTTTCT 59.003 43.478 10.75 0.00 31.59 2.52
4103 11031 5.684704 TGATGTTGTTTCTCTTCTGAAGGT 58.315 37.500 16.83 0.00 0.00 3.50
4105 11033 3.627577 TGTTGTTTCTCTTCTGAAGGTGC 59.372 43.478 16.83 4.92 0.00 5.01
4153 11081 6.137794 TCGTGTTGGTTGTGTTTTATCATT 57.862 33.333 0.00 0.00 0.00 2.57
4154 11082 6.202937 TCGTGTTGGTTGTGTTTTATCATTC 58.797 36.000 0.00 0.00 0.00 2.67
4165 11093 1.999048 TTATCATTCGTTCGTGCCGT 58.001 45.000 0.00 0.00 0.00 5.68
4181 11114 0.321564 CCGTGCATCCCTTGTTCTCA 60.322 55.000 0.00 0.00 0.00 3.27
4222 11155 9.764363 ACCTTTCTTTGAACTCATTTTAATTCC 57.236 29.630 0.00 0.00 0.00 3.01
4292 11268 1.021390 CAAGCCCAATCGCTCTCGTT 61.021 55.000 0.00 0.00 38.44 3.85
4316 11292 5.418310 TTTTTCTGTCGTCAACATCTTCC 57.582 39.130 0.00 0.00 37.23 3.46
4317 11293 2.347697 TCTGTCGTCAACATCTTCCG 57.652 50.000 0.00 0.00 37.23 4.30
4318 11294 1.611977 TCTGTCGTCAACATCTTCCGT 59.388 47.619 0.00 0.00 37.23 4.69
4319 11295 1.721389 CTGTCGTCAACATCTTCCGTG 59.279 52.381 0.00 0.00 37.23 4.94
4320 11296 1.338655 TGTCGTCAACATCTTCCGTGA 59.661 47.619 0.00 0.00 31.20 4.35
4321 11297 1.719780 GTCGTCAACATCTTCCGTGAC 59.280 52.381 0.00 0.00 0.00 3.67
4322 11298 1.338655 TCGTCAACATCTTCCGTGACA 59.661 47.619 3.81 0.00 0.00 3.58
4323 11299 2.029380 TCGTCAACATCTTCCGTGACAT 60.029 45.455 3.81 0.00 0.00 3.06
4324 11300 2.092681 CGTCAACATCTTCCGTGACATG 59.907 50.000 3.81 0.00 0.00 3.21
4325 11301 2.076100 TCAACATCTTCCGTGACATGC 58.924 47.619 0.00 0.00 0.00 4.06
4326 11302 1.805943 CAACATCTTCCGTGACATGCA 59.194 47.619 0.00 0.00 0.00 3.96
4327 11303 1.442769 ACATCTTCCGTGACATGCAC 58.557 50.000 9.41 9.41 44.21 4.57
4328 11304 1.002430 ACATCTTCCGTGACATGCACT 59.998 47.619 15.20 0.00 45.49 4.40
4329 11305 1.395954 CATCTTCCGTGACATGCACTG 59.604 52.381 15.20 10.52 45.49 3.66
4330 11306 0.392706 TCTTCCGTGACATGCACTGT 59.607 50.000 15.20 0.00 45.49 3.55
4338 11314 2.772102 ACATGCACTGTCCCTACCA 58.228 52.632 0.00 0.00 29.94 3.25
4339 11315 0.324943 ACATGCACTGTCCCTACCAC 59.675 55.000 0.00 0.00 29.94 4.16
4340 11316 0.324614 CATGCACTGTCCCTACCACA 59.675 55.000 0.00 0.00 0.00 4.17
4341 11317 1.064003 ATGCACTGTCCCTACCACAA 58.936 50.000 0.00 0.00 0.00 3.33
4342 11318 0.396435 TGCACTGTCCCTACCACAAG 59.604 55.000 0.00 0.00 0.00 3.16
4343 11319 0.396811 GCACTGTCCCTACCACAAGT 59.603 55.000 0.00 0.00 0.00 3.16
4344 11320 1.878102 GCACTGTCCCTACCACAAGTG 60.878 57.143 0.00 0.00 0.00 3.16
4345 11321 1.416401 CACTGTCCCTACCACAAGTGT 59.584 52.381 0.00 0.00 0.00 3.55
4346 11322 1.416401 ACTGTCCCTACCACAAGTGTG 59.584 52.381 4.38 4.38 45.23 3.82
4347 11323 1.416401 CTGTCCCTACCACAAGTGTGT 59.584 52.381 10.40 3.46 44.21 3.72
4348 11324 1.841277 TGTCCCTACCACAAGTGTGTT 59.159 47.619 10.40 0.00 44.21 3.32
4349 11325 3.039743 TGTCCCTACCACAAGTGTGTTA 58.960 45.455 10.40 0.00 44.21 2.41
4350 11326 3.070446 TGTCCCTACCACAAGTGTGTTAG 59.930 47.826 10.40 9.44 44.21 2.34
4355 11331 3.637911 ACCACAAGTGTGTTAGGTTGA 57.362 42.857 10.40 0.00 44.21 3.18
4356 11332 4.164843 ACCACAAGTGTGTTAGGTTGAT 57.835 40.909 10.40 0.00 44.21 2.57
4357 11333 4.134563 ACCACAAGTGTGTTAGGTTGATC 58.865 43.478 10.40 0.00 44.21 2.92
4358 11334 4.141482 ACCACAAGTGTGTTAGGTTGATCT 60.141 41.667 10.40 0.00 44.21 2.75
4359 11335 4.452455 CCACAAGTGTGTTAGGTTGATCTC 59.548 45.833 10.40 0.00 44.21 2.75
4360 11336 5.300752 CACAAGTGTGTTAGGTTGATCTCT 58.699 41.667 3.17 0.00 40.96 3.10
4361 11337 5.406780 CACAAGTGTGTTAGGTTGATCTCTC 59.593 44.000 3.17 0.00 40.96 3.20
4362 11338 5.305644 ACAAGTGTGTTAGGTTGATCTCTCT 59.694 40.000 0.00 0.00 32.58 3.10
4363 11339 5.652994 AGTGTGTTAGGTTGATCTCTCTC 57.347 43.478 0.00 0.00 0.00 3.20
4364 11340 4.464597 AGTGTGTTAGGTTGATCTCTCTCC 59.535 45.833 0.00 0.00 0.00 3.71
4365 11341 3.769844 TGTGTTAGGTTGATCTCTCTCCC 59.230 47.826 0.00 0.00 0.00 4.30
4366 11342 3.024547 TGTTAGGTTGATCTCTCTCCCG 58.975 50.000 0.00 0.00 0.00 5.14
4367 11343 3.025262 GTTAGGTTGATCTCTCTCCCGT 58.975 50.000 0.00 0.00 0.00 5.28
4368 11344 2.239681 AGGTTGATCTCTCTCCCGTT 57.760 50.000 0.00 0.00 0.00 4.44
4369 11345 2.104170 AGGTTGATCTCTCTCCCGTTC 58.896 52.381 0.00 0.00 0.00 3.95
4370 11346 1.202313 GGTTGATCTCTCTCCCGTTCG 60.202 57.143 0.00 0.00 0.00 3.95
4371 11347 1.743958 GTTGATCTCTCTCCCGTTCGA 59.256 52.381 0.00 0.00 0.00 3.71
4372 11348 2.124277 TGATCTCTCTCCCGTTCGAA 57.876 50.000 0.00 0.00 0.00 3.71
4373 11349 1.743958 TGATCTCTCTCCCGTTCGAAC 59.256 52.381 18.47 18.47 0.00 3.95
4374 11350 1.065851 GATCTCTCTCCCGTTCGAACC 59.934 57.143 22.07 5.28 0.00 3.62
4375 11351 0.964358 TCTCTCTCCCGTTCGAACCC 60.964 60.000 22.07 0.00 0.00 4.11
4376 11352 1.228644 TCTCTCCCGTTCGAACCCA 60.229 57.895 22.07 5.59 0.00 4.51
4377 11353 0.828762 TCTCTCCCGTTCGAACCCAA 60.829 55.000 22.07 6.82 0.00 4.12
4378 11354 0.669625 CTCTCCCGTTCGAACCCAAC 60.670 60.000 22.07 0.00 0.00 3.77
4379 11355 2.025418 CTCCCGTTCGAACCCAACG 61.025 63.158 22.07 11.05 45.03 4.10
4398 11374 4.754667 GTCGAACGGGCCCCTGAC 62.755 72.222 18.66 15.07 0.00 3.51
4400 11376 4.452733 CGAACGGGCCCCTGACTC 62.453 72.222 18.66 4.64 0.00 3.36
4401 11377 4.452733 GAACGGGCCCCTGACTCG 62.453 72.222 18.66 4.74 0.00 4.18
4410 11386 3.842923 CCTGACTCGCGCCCTGAT 61.843 66.667 0.00 0.00 0.00 2.90
4411 11387 2.279120 CTGACTCGCGCCCTGATC 60.279 66.667 0.00 0.00 0.00 2.92
4412 11388 4.193334 TGACTCGCGCCCTGATCG 62.193 66.667 0.00 0.00 0.00 3.69
4413 11389 4.933064 GACTCGCGCCCTGATCGG 62.933 72.222 0.00 0.00 0.00 4.18
4432 11408 3.310307 GGCGCCCAACCAAACCAT 61.310 61.111 18.11 0.00 0.00 3.55
4433 11409 2.048316 GCGCCCAACCAAACCATG 60.048 61.111 0.00 0.00 0.00 3.66
4447 11423 3.996621 CATGGTTGGTGGGCCCCT 61.997 66.667 22.27 0.00 0.00 4.79
4448 11424 3.996621 ATGGTTGGTGGGCCCCTG 61.997 66.667 22.27 0.00 0.00 4.45
4450 11426 4.994756 GGTTGGTGGGCCCCTGTG 62.995 72.222 22.27 0.00 0.00 3.66
4451 11427 3.897122 GTTGGTGGGCCCCTGTGA 61.897 66.667 22.27 0.00 0.00 3.58
4452 11428 3.897122 TTGGTGGGCCCCTGTGAC 61.897 66.667 22.27 10.43 0.00 3.67
4461 11437 3.849951 CCCTGTGACCCGCGCTAT 61.850 66.667 5.56 0.00 0.00 2.97
4462 11438 2.495409 CCCTGTGACCCGCGCTATA 61.495 63.158 5.56 0.00 0.00 1.31
4463 11439 1.666011 CCTGTGACCCGCGCTATAT 59.334 57.895 5.56 0.00 0.00 0.86
4464 11440 0.885879 CCTGTGACCCGCGCTATATA 59.114 55.000 5.56 0.00 0.00 0.86
4465 11441 1.271379 CCTGTGACCCGCGCTATATAA 59.729 52.381 5.56 0.00 0.00 0.98
4466 11442 2.288579 CCTGTGACCCGCGCTATATAAA 60.289 50.000 5.56 0.00 0.00 1.40
4467 11443 2.729882 CTGTGACCCGCGCTATATAAAC 59.270 50.000 5.56 0.00 0.00 2.01
4468 11444 2.101082 TGTGACCCGCGCTATATAAACA 59.899 45.455 5.56 0.00 0.00 2.83
4469 11445 2.729882 GTGACCCGCGCTATATAAACAG 59.270 50.000 5.56 0.00 0.00 3.16
4470 11446 2.624364 TGACCCGCGCTATATAAACAGA 59.376 45.455 5.56 0.00 0.00 3.41
4471 11447 3.243336 GACCCGCGCTATATAAACAGAG 58.757 50.000 5.56 0.00 0.00 3.35
4472 11448 2.889045 ACCCGCGCTATATAAACAGAGA 59.111 45.455 5.56 0.00 0.00 3.10
4473 11449 3.510360 ACCCGCGCTATATAAACAGAGAT 59.490 43.478 5.56 0.00 0.00 2.75
4474 11450 3.859961 CCCGCGCTATATAAACAGAGATG 59.140 47.826 5.56 0.00 0.00 2.90
4475 11451 3.859961 CCGCGCTATATAAACAGAGATGG 59.140 47.826 5.56 0.00 0.00 3.51
4476 11452 3.859961 CGCGCTATATAAACAGAGATGGG 59.140 47.826 5.56 0.00 0.00 4.00
4477 11453 4.184629 GCGCTATATAAACAGAGATGGGG 58.815 47.826 0.00 0.00 0.00 4.96
4478 11454 4.184629 CGCTATATAAACAGAGATGGGGC 58.815 47.826 0.00 0.00 0.00 5.80
4479 11455 4.518249 GCTATATAAACAGAGATGGGGCC 58.482 47.826 0.00 0.00 0.00 5.80
4480 11456 3.703001 ATATAAACAGAGATGGGGCCG 57.297 47.619 0.00 0.00 0.00 6.13
4481 11457 0.474184 ATAAACAGAGATGGGGCCGG 59.526 55.000 0.00 0.00 0.00 6.13
4482 11458 1.632018 TAAACAGAGATGGGGCCGGG 61.632 60.000 2.18 0.00 0.00 5.73
4497 11473 2.183555 GGGGCACGACTTACGAGG 59.816 66.667 0.00 0.00 45.77 4.63
4498 11474 2.643232 GGGGCACGACTTACGAGGT 61.643 63.158 0.00 0.00 45.77 3.85
4499 11475 1.291272 GGGCACGACTTACGAGGTT 59.709 57.895 0.00 0.00 45.77 3.50
4500 11476 0.527565 GGGCACGACTTACGAGGTTA 59.472 55.000 0.00 0.00 45.77 2.85
4501 11477 1.067635 GGGCACGACTTACGAGGTTAA 60.068 52.381 0.00 0.00 45.77 2.01
4502 11478 2.417787 GGGCACGACTTACGAGGTTAAT 60.418 50.000 0.00 0.00 45.77 1.40
4503 11479 2.856557 GGCACGACTTACGAGGTTAATC 59.143 50.000 0.00 0.00 45.77 1.75
4505 11481 2.529090 CACGACTTACGAGGTTAATCGC 59.471 50.000 0.00 0.00 46.60 4.58
4506 11482 2.421424 ACGACTTACGAGGTTAATCGCT 59.579 45.455 0.00 0.00 46.60 4.93
4507 11483 2.782192 CGACTTACGAGGTTAATCGCTG 59.218 50.000 0.00 0.00 46.60 5.18
4508 11484 2.534757 GACTTACGAGGTTAATCGCTGC 59.465 50.000 0.00 0.00 46.60 5.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
156 166 1.689273 GTAGATGAAGGTGGCGGATCT 59.311 52.381 0.00 0.00 0.00 2.75
248 276 4.959596 GGCAGATCGCGGAGGAGC 62.960 72.222 6.13 4.49 43.84 4.70
391 423 1.522900 CCCAACCCTAGACCATCCAT 58.477 55.000 0.00 0.00 0.00 3.41
454 508 2.019408 CGTCACCGCGATGTGAACA 61.019 57.895 17.85 0.00 46.17 3.18
506 560 3.352338 GAGTCCCACGCGGAATCGT 62.352 63.158 12.47 0.00 45.28 3.73
523 577 3.006940 GCCACGTAAGATTGACAATGGA 58.993 45.455 5.14 0.00 43.62 3.41
528 582 0.604073 TCCGCCACGTAAGATTGACA 59.396 50.000 0.00 0.00 43.62 3.58
581 661 7.445121 CCTGACTGGCACTCATAATATCTAAA 58.555 38.462 0.00 0.00 0.00 1.85
600 680 2.113139 CAAACACCCGGCCTGACT 59.887 61.111 0.00 0.00 0.00 3.41
612 692 0.821711 CCTGAAACGGGCCTCAAACA 60.822 55.000 0.84 0.00 0.00 2.83
628 709 2.124403 GGCCCAGACAGATGCCTG 60.124 66.667 0.00 0.00 45.76 4.85
633 714 3.509442 TGAAATTTTGGCCCAGACAGAT 58.491 40.909 0.00 0.00 0.00 2.90
634 715 2.956132 TGAAATTTTGGCCCAGACAGA 58.044 42.857 0.00 0.00 0.00 3.41
636 717 3.006752 GTCATGAAATTTTGGCCCAGACA 59.993 43.478 0.00 0.00 0.00 3.41
644 725 5.097529 CACTGATCGGTCATGAAATTTTGG 58.902 41.667 3.54 0.00 32.98 3.28
680 761 4.637771 GGCCTCAAACGCCAGTAT 57.362 55.556 0.00 0.00 46.27 2.12
753 834 6.992664 ATCACCAATCTTCTATACTGCTCT 57.007 37.500 0.00 0.00 0.00 4.09
759 840 5.758296 TCGCCAAATCACCAATCTTCTATAC 59.242 40.000 0.00 0.00 0.00 1.47
923 1046 4.735369 TGCTTATAAGGAGAGAGAGGGAG 58.265 47.826 14.28 0.00 0.00 4.30
924 1047 4.417183 TCTGCTTATAAGGAGAGAGAGGGA 59.583 45.833 27.27 8.11 46.63 4.20
925 1048 4.735369 TCTGCTTATAAGGAGAGAGAGGG 58.265 47.826 27.27 6.03 46.63 4.30
960 4334 2.288666 GTGTTTGCACAACTCTCCTGA 58.711 47.619 11.34 0.00 44.64 3.86
1035 4419 9.509956 AAATACTAGCTAGAGACAGTACATAGG 57.490 37.037 27.45 0.00 0.00 2.57
1040 4424 6.566376 GCCGAAATACTAGCTAGAGACAGTAC 60.566 46.154 27.45 7.17 0.00 2.73
1042 4426 4.276431 GCCGAAATACTAGCTAGAGACAGT 59.724 45.833 27.45 8.83 0.00 3.55
1069 4453 0.389391 AGCTATGCTCGCCGTGTAAT 59.611 50.000 0.00 0.00 30.62 1.89
1083 4467 2.511452 CCACCCGGCAGCTAGCTAT 61.511 63.158 18.86 0.00 44.79 2.97
1312 4696 1.234615 TTCGCTGCAGCTTTGGTACC 61.235 55.000 34.22 4.43 39.32 3.34
1337 4722 2.092291 CGGAACACGTCATGGACCG 61.092 63.158 0.00 0.00 41.87 4.79
1560 4955 4.261578 TGAAGTAAAACCCAGGTAGACG 57.738 45.455 0.00 0.00 0.00 4.18
1607 5002 2.743636 TGCTGCCTGTAGTCAACTAC 57.256 50.000 12.41 12.41 46.78 2.73
1638 5033 9.113876 GAAGTAAAACGTGAACCATTGATTAAG 57.886 33.333 0.00 0.00 0.00 1.85
1642 5037 6.627395 TGAAGTAAAACGTGAACCATTGAT 57.373 33.333 0.00 0.00 0.00 2.57
1646 5061 9.974980 ATTTTTATGAAGTAAAACGTGAACCAT 57.025 25.926 0.00 0.00 40.88 3.55
1647 5062 9.453325 GATTTTTATGAAGTAAAACGTGAACCA 57.547 29.630 0.00 0.00 40.88 3.67
1648 5063 9.453325 TGATTTTTATGAAGTAAAACGTGAACC 57.547 29.630 0.00 0.00 40.88 3.62
1653 5068 9.405587 CCACATGATTTTTATGAAGTAAAACGT 57.594 29.630 0.00 0.00 40.88 3.99
1654 5069 9.619316 TCCACATGATTTTTATGAAGTAAAACG 57.381 29.630 0.00 0.00 40.88 3.60
1680 5095 5.394115 GCGGTTTAATCTGGTGGAAATGATT 60.394 40.000 0.00 0.00 34.16 2.57
1683 5098 3.443681 AGCGGTTTAATCTGGTGGAAATG 59.556 43.478 0.00 0.00 0.00 2.32
1691 5106 3.081804 AGTTCCAAGCGGTTTAATCTGG 58.918 45.455 0.00 0.00 0.00 3.86
1808 5249 4.148696 CCAAAAAGTCAAATCATGCACGAC 59.851 41.667 0.00 0.00 0.00 4.34
1868 5309 1.344114 GCCCAGTCAGCAAAATTTCCA 59.656 47.619 0.00 0.00 0.00 3.53
1885 5326 2.897436 ACGAAATAGGTAAAGACGCCC 58.103 47.619 0.00 0.00 0.00 6.13
1886 5327 4.389687 TGAAACGAAATAGGTAAAGACGCC 59.610 41.667 0.00 0.00 0.00 5.68
1916 5357 1.589196 GGCAGCGGACGTGAGATAC 60.589 63.158 0.00 0.00 0.00 2.24
2038 5479 7.815068 AGCGCTCTAGGTAATGAACTTATAATG 59.185 37.037 2.64 0.00 0.00 1.90
2070 5513 5.730296 TTTCAACCAAAGTTTCTCCAACA 57.270 34.783 0.00 0.00 37.93 3.33
2072 5515 6.293004 ACATTTCAACCAAAGTTTCTCCAA 57.707 33.333 0.00 0.00 32.45 3.53
2073 5516 5.930837 ACATTTCAACCAAAGTTTCTCCA 57.069 34.783 0.00 0.00 32.45 3.86
2074 5517 7.657336 TGATACATTTCAACCAAAGTTTCTCC 58.343 34.615 0.00 0.00 32.45 3.71
2133 5578 4.396166 ACGAGCGAGATCAAATTTCCAATT 59.604 37.500 0.00 0.00 0.00 2.32
2195 5646 9.209175 AGGATACATGTAGCGAATAAAGAATTC 57.791 33.333 14.56 0.00 39.21 2.17
2197 5648 8.993121 CAAGGATACATGTAGCGAATAAAGAAT 58.007 33.333 14.56 0.00 41.41 2.40
2359 5825 2.728839 CGTCTGTTTCTGCTCTGTTCTC 59.271 50.000 0.00 0.00 0.00 2.87
2363 5829 0.601311 GCCGTCTGTTTCTGCTCTGT 60.601 55.000 0.00 0.00 0.00 3.41
2369 5835 1.197721 GTTCATGGCCGTCTGTTTCTG 59.802 52.381 0.00 0.00 0.00 3.02
2374 5840 2.351276 GGGTTCATGGCCGTCTGT 59.649 61.111 0.00 0.00 0.00 3.41
2537 6003 2.492019 TATTGTGCTGGATCTCGACG 57.508 50.000 0.00 0.00 0.00 5.12
2540 6006 5.928264 TGATAACATATTGTGCTGGATCTCG 59.072 40.000 0.00 0.00 0.00 4.04
2547 6037 8.692110 AACATTGTTGATAACATATTGTGCTG 57.308 30.769 0.15 0.00 41.79 4.41
2563 6053 5.816777 ACAGAATCCAAACCAAACATTGTTG 59.183 36.000 2.13 0.00 0.00 3.33
2584 6074 1.202758 TGAACACAGCCCTGGTTACAG 60.203 52.381 0.00 0.00 44.51 2.74
2675 6165 2.429571 GCGCTTACGACGACACCA 60.430 61.111 0.00 0.00 43.93 4.17
2721 6212 3.715628 AAAGCATGGTGTCTTGTCAAC 57.284 42.857 0.00 0.00 0.00 3.18
2729 6220 1.880027 ACCTCGAAAAAGCATGGTGTC 59.120 47.619 0.00 0.00 0.00 3.67
2731 6222 2.154462 AGACCTCGAAAAAGCATGGTG 58.846 47.619 0.00 0.00 0.00 4.17
2753 6244 6.619329 AGAAATCTCTCTCAAGGTTAGCTT 57.381 37.500 0.00 0.00 0.00 3.74
2910 6401 9.896263 TTAAAAATCTCCGGTGTAAACAATTAC 57.104 29.630 0.00 0.00 41.50 1.89
2912 6403 9.990360 AATTAAAAATCTCCGGTGTAAACAATT 57.010 25.926 0.00 0.83 0.00 2.32
2913 6404 9.418045 CAATTAAAAATCTCCGGTGTAAACAAT 57.582 29.630 0.00 0.00 0.00 2.71
2914 6405 8.414778 ACAATTAAAAATCTCCGGTGTAAACAA 58.585 29.630 0.00 0.00 0.00 2.83
2977 6468 7.571080 ACATGCATGTACATTATGATCACAA 57.429 32.000 30.50 0.00 39.68 3.33
2982 6473 6.208007 CCAGGAACATGCATGTACATTATGAT 59.792 38.462 31.55 13.47 40.80 2.45
3113 6604 1.657822 GAAGAGAAGCCCGATCAACC 58.342 55.000 0.00 0.00 0.00 3.77
3169 6670 7.226720 ACTTTTCAGCTTCGTCAGAGAAAATAA 59.773 33.333 5.20 0.00 37.39 1.40
3170 6671 6.706270 ACTTTTCAGCTTCGTCAGAGAAAATA 59.294 34.615 5.20 0.00 37.39 1.40
3171 6672 5.529060 ACTTTTCAGCTTCGTCAGAGAAAAT 59.471 36.000 5.20 0.00 37.39 1.82
3206 6708 2.676029 CCTGCACGCACGCATTACA 61.676 57.895 0.00 0.00 42.06 2.41
3207 6709 2.098298 CCTGCACGCACGCATTAC 59.902 61.111 0.00 0.00 42.06 1.89
3208 6710 2.047750 TCCTGCACGCACGCATTA 60.048 55.556 0.00 0.00 42.06 1.90
3436 10333 6.663523 TCTCCTCAACGCCTATGAATATGATA 59.336 38.462 0.00 0.00 0.00 2.15
3437 10334 5.481824 TCTCCTCAACGCCTATGAATATGAT 59.518 40.000 0.00 0.00 0.00 2.45
3438 10335 4.832823 TCTCCTCAACGCCTATGAATATGA 59.167 41.667 0.00 0.00 0.00 2.15
3439 10336 4.926238 GTCTCCTCAACGCCTATGAATATG 59.074 45.833 0.00 0.00 0.00 1.78
3440 10337 4.588951 TGTCTCCTCAACGCCTATGAATAT 59.411 41.667 0.00 0.00 0.00 1.28
3441 10338 3.958147 TGTCTCCTCAACGCCTATGAATA 59.042 43.478 0.00 0.00 0.00 1.75
3442 10339 2.766263 TGTCTCCTCAACGCCTATGAAT 59.234 45.455 0.00 0.00 0.00 2.57
3443 10340 2.176045 TGTCTCCTCAACGCCTATGAA 58.824 47.619 0.00 0.00 0.00 2.57
3467 10364 5.726560 TCCCCTCCATTTACATCTCTATCA 58.273 41.667 0.00 0.00 0.00 2.15
3482 10379 4.148838 CAAAAACTACACATTCCCCTCCA 58.851 43.478 0.00 0.00 0.00 3.86
3483 10380 3.509967 CCAAAAACTACACATTCCCCTCC 59.490 47.826 0.00 0.00 0.00 4.30
3484 10381 4.403734 TCCAAAAACTACACATTCCCCTC 58.596 43.478 0.00 0.00 0.00 4.30
3488 10385 8.710835 TTTCTTTTCCAAAAACTACACATTCC 57.289 30.769 0.00 0.00 0.00 3.01
3562 10460 7.857734 TGTATCTTTTCGATGCTCCATTTTA 57.142 32.000 0.00 0.00 35.94 1.52
3606 10504 1.870402 CGTGTGTGTTGATGTTGGCTA 59.130 47.619 0.00 0.00 0.00 3.93
3621 10519 2.524034 TGATGTGTTTTTGTGCGTGTG 58.476 42.857 0.00 0.00 0.00 3.82
3623 10521 1.518102 GCTGATGTGTTTTTGTGCGTG 59.482 47.619 0.00 0.00 0.00 5.34
3626 10524 4.799419 ATTTGCTGATGTGTTTTTGTGC 57.201 36.364 0.00 0.00 0.00 4.57
3710 10612 9.483916 CGGATATGGTCATTGTTATAGTTTACA 57.516 33.333 0.00 0.00 0.00 2.41
3728 10630 0.535102 GGGACAAGGTGCGGATATGG 60.535 60.000 0.00 0.00 0.00 2.74
3739 10641 1.751927 GCATGGCAGAGGGACAAGG 60.752 63.158 0.00 0.00 38.69 3.61
3740 10642 1.030488 CAGCATGGCAGAGGGACAAG 61.030 60.000 0.00 0.00 38.69 3.16
3741 10643 1.001764 CAGCATGGCAGAGGGACAA 60.002 57.895 0.00 0.00 38.69 3.18
3742 10644 2.672908 CAGCATGGCAGAGGGACA 59.327 61.111 0.00 0.00 40.35 4.02
3825 10727 2.431683 CATAGGGTGGCATCGGGG 59.568 66.667 0.00 0.00 0.00 5.73
3840 10742 3.755467 GGGCTACACCTTCCCCAT 58.245 61.111 0.00 0.00 39.10 4.00
3878 10781 2.302260 TGAGGCAAACAAAACGATGGA 58.698 42.857 0.00 0.00 0.00 3.41
3891 10794 4.160329 ACCTATAATCGGAGATGAGGCAA 58.840 43.478 0.00 0.00 45.12 4.52
3910 10828 4.400961 GCCGAGCCTGAGCAACCT 62.401 66.667 0.00 0.00 43.56 3.50
3979 10897 2.496070 CAAGAAGGTAGATCGACACCCA 59.504 50.000 8.30 0.00 35.25 4.51
3988 10906 1.912043 AGTGCCTGCAAGAAGGTAGAT 59.088 47.619 0.00 0.00 39.75 1.98
4006 10924 2.116125 GACAAAGGCCCTGGCAGT 59.884 61.111 14.43 2.63 44.11 4.40
4080 11008 5.528690 CACCTTCAGAAGAGAAACAACATCA 59.471 40.000 12.14 0.00 0.00 3.07
4083 11011 3.627577 GCACCTTCAGAAGAGAAACAACA 59.372 43.478 12.14 0.00 0.00 3.33
4086 11014 2.172505 TGGCACCTTCAGAAGAGAAACA 59.827 45.455 12.14 1.62 0.00 2.83
4092 11020 2.877300 GCAAGATGGCACCTTCAGAAGA 60.877 50.000 12.14 0.00 0.00 2.87
4103 11031 2.510012 CGAGCGAGCAAGATGGCA 60.510 61.111 0.00 0.00 35.83 4.92
4105 11033 3.624300 CGCGAGCGAGCAAGATGG 61.624 66.667 12.58 0.00 42.83 3.51
4165 11093 3.084039 GACATTGAGAACAAGGGATGCA 58.916 45.455 0.00 0.00 41.30 3.96
4181 11114 9.295825 TCAAAGAAAGGTACAACATATGACATT 57.704 29.630 10.38 0.00 0.00 2.71
4228 11161 3.305539 GCACTGTTGCCTCATCAATGAAA 60.306 43.478 0.00 0.00 43.66 2.69
4299 11275 1.721389 CACGGAAGATGTTGACGACAG 59.279 52.381 1.26 0.00 42.62 3.51
4300 11276 1.338655 TCACGGAAGATGTTGACGACA 59.661 47.619 0.00 0.00 43.71 4.35
4301 11277 1.719780 GTCACGGAAGATGTTGACGAC 59.280 52.381 3.72 0.00 0.00 4.34
4302 11278 1.338655 TGTCACGGAAGATGTTGACGA 59.661 47.619 3.72 0.00 0.00 4.20
4303 11279 1.778334 TGTCACGGAAGATGTTGACG 58.222 50.000 0.00 0.00 0.00 4.35
4304 11280 2.159653 GCATGTCACGGAAGATGTTGAC 60.160 50.000 0.00 0.00 0.00 3.18
4305 11281 2.076100 GCATGTCACGGAAGATGTTGA 58.924 47.619 0.00 0.00 0.00 3.18
4306 11282 1.805943 TGCATGTCACGGAAGATGTTG 59.194 47.619 0.00 0.00 0.00 3.33
4307 11283 1.806542 GTGCATGTCACGGAAGATGTT 59.193 47.619 0.00 0.00 35.76 2.71
4321 11297 0.324614 TGTGGTAGGGACAGTGCATG 59.675 55.000 0.00 0.00 0.00 4.06
4322 11298 1.003580 CTTGTGGTAGGGACAGTGCAT 59.996 52.381 0.00 0.00 0.00 3.96
4323 11299 0.396435 CTTGTGGTAGGGACAGTGCA 59.604 55.000 0.00 0.00 0.00 4.57
4324 11300 0.396811 ACTTGTGGTAGGGACAGTGC 59.603 55.000 0.00 0.00 0.00 4.40
4325 11301 1.416401 ACACTTGTGGTAGGGACAGTG 59.584 52.381 5.72 0.00 32.92 3.66
4326 11302 1.416401 CACACTTGTGGTAGGGACAGT 59.584 52.381 5.72 0.00 42.10 3.55
4327 11303 2.158813 AACACACTTGTGGTAGGGACAG 60.159 50.000 13.78 0.00 45.48 3.51
4328 11304 1.841277 AACACACTTGTGGTAGGGACA 59.159 47.619 13.78 0.00 45.48 4.02
4329 11305 2.632987 AACACACTTGTGGTAGGGAC 57.367 50.000 13.78 0.00 45.48 4.46
4334 11310 4.757019 TCAACCTAACACACTTGTGGTA 57.243 40.909 13.78 10.36 45.48 3.25
4338 11314 5.305644 AGAGAGATCAACCTAACACACTTGT 59.694 40.000 0.00 0.00 37.67 3.16
4339 11315 5.788450 AGAGAGATCAACCTAACACACTTG 58.212 41.667 0.00 0.00 0.00 3.16
4340 11316 5.046950 GGAGAGAGATCAACCTAACACACTT 60.047 44.000 0.00 0.00 0.00 3.16
4341 11317 4.464597 GGAGAGAGATCAACCTAACACACT 59.535 45.833 0.00 0.00 0.00 3.55
4342 11318 4.382147 GGGAGAGAGATCAACCTAACACAC 60.382 50.000 0.00 0.00 0.00 3.82
4343 11319 3.769844 GGGAGAGAGATCAACCTAACACA 59.230 47.826 0.00 0.00 0.00 3.72
4344 11320 3.181485 CGGGAGAGAGATCAACCTAACAC 60.181 52.174 0.00 0.00 0.00 3.32
4345 11321 3.024547 CGGGAGAGAGATCAACCTAACA 58.975 50.000 0.00 0.00 0.00 2.41
4346 11322 3.025262 ACGGGAGAGAGATCAACCTAAC 58.975 50.000 0.00 0.00 0.00 2.34
4347 11323 3.383698 ACGGGAGAGAGATCAACCTAA 57.616 47.619 0.00 0.00 0.00 2.69
4348 11324 3.288964 GAACGGGAGAGAGATCAACCTA 58.711 50.000 0.00 0.00 0.00 3.08
4349 11325 2.104170 GAACGGGAGAGAGATCAACCT 58.896 52.381 0.00 0.00 0.00 3.50
4350 11326 1.202313 CGAACGGGAGAGAGATCAACC 60.202 57.143 0.00 0.00 0.00 3.77
4351 11327 1.743958 TCGAACGGGAGAGAGATCAAC 59.256 52.381 0.00 0.00 0.00 3.18
4352 11328 2.124277 TCGAACGGGAGAGAGATCAA 57.876 50.000 0.00 0.00 0.00 2.57
4353 11329 1.743958 GTTCGAACGGGAGAGAGATCA 59.256 52.381 13.36 0.00 0.00 2.92
4354 11330 1.065851 GGTTCGAACGGGAGAGAGATC 59.934 57.143 21.34 0.00 0.00 2.75
4355 11331 1.104630 GGTTCGAACGGGAGAGAGAT 58.895 55.000 21.34 0.00 0.00 2.75
4356 11332 0.964358 GGGTTCGAACGGGAGAGAGA 60.964 60.000 21.34 0.00 0.00 3.10
4357 11333 1.248785 TGGGTTCGAACGGGAGAGAG 61.249 60.000 21.34 0.00 0.00 3.20
4358 11334 0.828762 TTGGGTTCGAACGGGAGAGA 60.829 55.000 21.34 1.20 0.00 3.10
4359 11335 0.669625 GTTGGGTTCGAACGGGAGAG 60.670 60.000 21.34 0.00 0.00 3.20
4360 11336 1.368579 GTTGGGTTCGAACGGGAGA 59.631 57.895 21.34 3.59 0.00 3.71
4361 11337 2.025418 CGTTGGGTTCGAACGGGAG 61.025 63.158 21.34 8.35 41.95 4.30
4362 11338 2.029369 CGTTGGGTTCGAACGGGA 59.971 61.111 21.34 7.07 41.95 5.14
4381 11357 4.754667 GTCAGGGGCCCGTTCGAC 62.755 72.222 16.16 16.41 0.00 4.20
4383 11359 4.452733 GAGTCAGGGGCCCGTTCG 62.453 72.222 16.16 4.63 0.00 3.95
4384 11360 4.452733 CGAGTCAGGGGCCCGTTC 62.453 72.222 16.16 9.54 0.00 3.95
4393 11369 3.781770 GATCAGGGCGCGAGTCAGG 62.782 68.421 12.10 0.00 37.54 3.86
4394 11370 2.279120 GATCAGGGCGCGAGTCAG 60.279 66.667 12.10 0.00 37.54 3.51
4395 11371 4.193334 CGATCAGGGCGCGAGTCA 62.193 66.667 12.10 0.00 37.54 3.41
4396 11372 4.933064 CCGATCAGGGCGCGAGTC 62.933 72.222 12.10 0.00 35.97 3.36
4415 11391 3.310307 ATGGTTTGGTTGGGCGCC 61.310 61.111 21.18 21.18 0.00 6.53
4416 11392 2.048316 CATGGTTTGGTTGGGCGC 60.048 61.111 0.00 0.00 0.00 6.53
4417 11393 2.656055 CCATGGTTTGGTTGGGCG 59.344 61.111 2.57 0.00 40.99 6.13
4430 11406 3.996621 AGGGGCCCACCAACCATG 61.997 66.667 27.72 0.00 42.91 3.66
4431 11407 3.996621 CAGGGGCCCACCAACCAT 61.997 66.667 27.72 0.00 42.91 3.55
4433 11409 4.994756 CACAGGGGCCCACCAACC 62.995 72.222 27.72 4.38 42.91 3.77
4434 11410 3.897122 TCACAGGGGCCCACCAAC 61.897 66.667 27.72 5.28 42.91 3.77
4435 11411 3.897122 GTCACAGGGGCCCACCAA 61.897 66.667 27.72 4.22 42.91 3.67
4444 11420 1.816863 ATATAGCGCGGGTCACAGGG 61.817 60.000 8.83 0.00 0.00 4.45
4445 11421 0.885879 TATATAGCGCGGGTCACAGG 59.114 55.000 8.83 0.00 0.00 4.00
4446 11422 2.717580 TTATATAGCGCGGGTCACAG 57.282 50.000 8.83 0.00 0.00 3.66
4447 11423 2.101082 TGTTTATATAGCGCGGGTCACA 59.899 45.455 8.83 0.00 0.00 3.58
4448 11424 2.729882 CTGTTTATATAGCGCGGGTCAC 59.270 50.000 8.83 0.00 0.00 3.67
4449 11425 2.624364 TCTGTTTATATAGCGCGGGTCA 59.376 45.455 8.83 0.00 0.00 4.02
4450 11426 3.057736 TCTCTGTTTATATAGCGCGGGTC 60.058 47.826 8.83 0.00 0.00 4.46
4451 11427 2.889045 TCTCTGTTTATATAGCGCGGGT 59.111 45.455 8.83 0.00 0.00 5.28
4452 11428 3.570926 TCTCTGTTTATATAGCGCGGG 57.429 47.619 8.83 0.00 0.00 6.13
4453 11429 3.859961 CCATCTCTGTTTATATAGCGCGG 59.140 47.826 8.83 0.00 0.00 6.46
4454 11430 3.859961 CCCATCTCTGTTTATATAGCGCG 59.140 47.826 0.00 0.00 0.00 6.86
4455 11431 4.184629 CCCCATCTCTGTTTATATAGCGC 58.815 47.826 0.00 0.00 0.00 5.92
4456 11432 4.184629 GCCCCATCTCTGTTTATATAGCG 58.815 47.826 0.00 0.00 0.00 4.26
4457 11433 4.518249 GGCCCCATCTCTGTTTATATAGC 58.482 47.826 0.00 0.00 0.00 2.97
4458 11434 4.383118 CCGGCCCCATCTCTGTTTATATAG 60.383 50.000 0.00 0.00 0.00 1.31
4459 11435 3.517901 CCGGCCCCATCTCTGTTTATATA 59.482 47.826 0.00 0.00 0.00 0.86
4460 11436 2.305927 CCGGCCCCATCTCTGTTTATAT 59.694 50.000 0.00 0.00 0.00 0.86
4461 11437 1.697432 CCGGCCCCATCTCTGTTTATA 59.303 52.381 0.00 0.00 0.00 0.98
4462 11438 0.474184 CCGGCCCCATCTCTGTTTAT 59.526 55.000 0.00 0.00 0.00 1.40
4463 11439 1.632018 CCCGGCCCCATCTCTGTTTA 61.632 60.000 0.00 0.00 0.00 2.01
4464 11440 2.677228 CCGGCCCCATCTCTGTTT 59.323 61.111 0.00 0.00 0.00 2.83
4465 11441 3.411517 CCCGGCCCCATCTCTGTT 61.412 66.667 0.00 0.00 0.00 3.16
4478 11454 3.695022 CTCGTAAGTCGTGCCCCGG 62.695 68.421 0.00 0.00 40.80 5.73
4479 11455 2.202570 CTCGTAAGTCGTGCCCCG 60.203 66.667 0.00 0.00 40.80 5.73
4480 11456 2.163601 AACCTCGTAAGTCGTGCCCC 62.164 60.000 0.00 0.00 40.80 5.80
4481 11457 0.527565 TAACCTCGTAAGTCGTGCCC 59.472 55.000 0.00 0.00 40.80 5.36
4482 11458 2.352503 TTAACCTCGTAAGTCGTGCC 57.647 50.000 0.00 0.00 40.80 5.01
4483 11459 2.529090 CGATTAACCTCGTAAGTCGTGC 59.471 50.000 0.00 0.00 40.80 5.34
4484 11460 2.529090 GCGATTAACCTCGTAAGTCGTG 59.471 50.000 0.86 0.00 40.73 4.35
4485 11461 2.421424 AGCGATTAACCTCGTAAGTCGT 59.579 45.455 0.86 0.00 40.73 4.34
4486 11462 2.782192 CAGCGATTAACCTCGTAAGTCG 59.218 50.000 0.86 0.00 40.73 4.18
4487 11463 2.534757 GCAGCGATTAACCTCGTAAGTC 59.465 50.000 0.86 0.00 40.73 3.01
4488 11464 2.537401 GCAGCGATTAACCTCGTAAGT 58.463 47.619 0.86 0.00 40.73 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.