Multiple sequence alignment - TraesCS5D01G095300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G095300 chr5D 100.000 7034 0 0 1 7034 104601856 104594823 0.000000e+00 12990.0
1 TraesCS5D01G095300 chr5D 93.171 615 13 8 6445 7034 444237817 444238427 0.000000e+00 876.0
2 TraesCS5D01G095300 chr5B 97.391 5711 88 17 778 6455 114431653 114437335 0.000000e+00 9664.0
3 TraesCS5D01G095300 chr5B 89.720 214 20 2 555 767 526606544 526606756 8.990000e-69 272.0
4 TraesCS5D01G095300 chr5A 93.545 1828 59 16 2194 3993 108585344 108587140 0.000000e+00 2667.0
5 TraesCS5D01G095300 chr5A 92.940 1558 77 19 4904 6445 108588126 108589666 0.000000e+00 2237.0
6 TraesCS5D01G095300 chr5A 92.655 1307 40 19 778 2051 108577570 108578853 0.000000e+00 1831.0
7 TraesCS5D01G095300 chr5A 94.200 931 41 7 3984 4906 108587164 108588089 0.000000e+00 1408.0
8 TraesCS5D01G095300 chr5A 90.698 215 18 2 555 767 410197810 410197596 1.150000e-72 285.0
9 TraesCS5D01G095300 chr5A 92.523 107 5 2 444 549 108577464 108577568 4.400000e-32 150.0
10 TraesCS5D01G095300 chr2D 94.118 595 9 5 6443 7034 12108191 12108762 0.000000e+00 881.0
11 TraesCS5D01G095300 chr2D 94.521 584 9 10 6452 7034 606296642 606297203 0.000000e+00 880.0
12 TraesCS5D01G095300 chr2D 93.220 590 10 4 6446 7034 616112014 616112574 0.000000e+00 841.0
13 TraesCS5D01G095300 chr2D 97.990 199 4 0 6448 6646 40937724 40937526 5.220000e-91 346.0
14 TraesCS5D01G095300 chr2D 90.698 215 17 3 555 767 427310173 427310386 4.150000e-72 283.0
15 TraesCS5D01G095300 chrUn 94.068 590 9 7 6448 7034 26529410 26529976 0.000000e+00 872.0
16 TraesCS5D01G095300 chrUn 94.027 586 9 7 6452 7034 28497784 28497222 0.000000e+00 865.0
17 TraesCS5D01G095300 chrUn 93.857 586 10 7 6452 7034 29247229 29247791 0.000000e+00 859.0
18 TraesCS5D01G095300 chrUn 100.000 419 0 0 3196 3614 476947169 476946751 0.000000e+00 774.0
19 TraesCS5D01G095300 chrUn 89.720 214 21 1 555 767 87719840 87719627 8.990000e-69 272.0
20 TraesCS5D01G095300 chrUn 88.462 208 24 0 555 762 208668164 208668371 1.170000e-62 252.0
21 TraesCS5D01G095300 chrUn 88.462 208 24 0 555 762 256167825 256168032 1.170000e-62 252.0
22 TraesCS5D01G095300 chrUn 88.462 208 24 0 555 762 275352959 275352752 1.170000e-62 252.0
23 TraesCS5D01G095300 chrUn 88.462 208 24 0 555 762 361994034 361993827 1.170000e-62 252.0
24 TraesCS5D01G095300 chrUn 88.462 208 24 0 555 762 366688870 366688663 1.170000e-62 252.0
25 TraesCS5D01G095300 chrUn 88.462 208 24 0 555 762 369807698 369807905 1.170000e-62 252.0
26 TraesCS5D01G095300 chrUn 88.462 208 24 0 555 762 382060343 382060550 1.170000e-62 252.0
27 TraesCS5D01G095300 chrUn 87.019 208 27 0 555 762 31477280 31477487 1.180000e-57 235.0
28 TraesCS5D01G095300 chrUn 86.449 214 28 1 555 767 314205686 314205473 4.240000e-57 233.0
29 TraesCS5D01G095300 chr6D 94.198 586 8 7 6452 7034 329856627 329856065 0.000000e+00 870.0
30 TraesCS5D01G095300 chr6D 92.040 603 14 10 6454 7034 21441388 21440798 0.000000e+00 817.0
31 TraesCS5D01G095300 chr6D 87.907 215 23 3 555 767 99228495 99228708 4.210000e-62 250.0
32 TraesCS5D01G095300 chr1D 93.857 586 11 6 6452 7034 57313178 57312615 0.000000e+00 859.0
33 TraesCS5D01G095300 chr1D 89.720 214 21 1 555 767 324489407 324489194 8.990000e-69 272.0
34 TraesCS5D01G095300 chr1D 88.318 214 24 1 555 767 64213865 64214078 9.050000e-64 255.0
35 TraesCS5D01G095300 chr1D 86.344 227 31 0 555 781 285778373 285778599 1.520000e-61 248.0
36 TraesCS5D01G095300 chr7D 92.659 613 13 9 6447 7034 112525928 112525323 0.000000e+00 854.0
37 TraesCS5D01G095300 chr7D 90.187 214 20 1 555 767 42618586 42618373 1.930000e-70 278.0
38 TraesCS5D01G095300 chr3D 91.475 610 29 11 6443 7034 7189626 7190230 0.000000e+00 817.0
39 TraesCS5D01G095300 chr3D 92.321 586 8 10 6452 7034 57229797 57229246 0.000000e+00 798.0
40 TraesCS5D01G095300 chr3D 90.187 214 20 1 555 767 333949564 333949351 1.930000e-70 278.0
41 TraesCS5D01G095300 chr4D 91.652 587 37 6 6452 7034 9266212 9266790 0.000000e+00 802.0
42 TraesCS5D01G095300 chr4D 90.000 330 4 4 6447 6775 118579970 118580271 3.950000e-107 399.0
43 TraesCS5D01G095300 chr4D 90.385 208 20 0 555 762 332376322 332376529 2.500000e-69 274.0
44 TraesCS5D01G095300 chr4D 88.571 210 23 1 559 767 464726695 464726486 3.260000e-63 254.0
45 TraesCS5D01G095300 chr2A 91.827 208 17 0 555 762 214842481 214842274 2.480000e-74 291.0
46 TraesCS5D01G095300 chr2A 91.121 214 18 1 555 767 61973331 61973544 8.930000e-74 289.0
47 TraesCS5D01G095300 chr7A 91.163 215 16 3 555 767 638749866 638749653 8.930000e-74 289.0
48 TraesCS5D01G095300 chr7A 90.654 214 19 1 555 767 110117027 110116814 4.150000e-72 283.0
49 TraesCS5D01G095300 chr1A 91.121 214 18 1 555 767 557124347 557124560 8.930000e-74 289.0
50 TraesCS5D01G095300 chr1A 88.511 235 26 1 555 788 15510601 15510367 4.150000e-72 283.0
51 TraesCS5D01G095300 chr1A 90.654 214 19 1 555 767 444351195 444351408 4.150000e-72 283.0
52 TraesCS5D01G095300 chr1A 90.187 214 20 1 555 767 247782722 247782509 1.930000e-70 278.0
53 TraesCS5D01G095300 chr1A 89.573 211 21 1 558 767 504106208 504105998 4.180000e-67 267.0
54 TraesCS5D01G095300 chr1A 89.252 214 22 1 555 767 564593455 564593668 4.180000e-67 267.0
55 TraesCS5D01G095300 chr1A 82.022 89 14 2 1607 1694 532266775 532266862 2.720000e-09 75.0
56 TraesCS5D01G095300 chr6B 90.187 214 20 1 555 767 250046379 250046592 1.930000e-70 278.0
57 TraesCS5D01G095300 chr6A 90.187 214 20 1 555 767 395134949 395135162 1.930000e-70 278.0
58 TraesCS5D01G095300 chr6A 100.000 29 0 0 375 403 583029894 583029866 4.000000e-03 54.7
59 TraesCS5D01G095300 chr3A 91.111 45 4 0 376 420 665941790 665941834 2.120000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G095300 chr5D 104594823 104601856 7033 True 12990.0 12990 100.000000 1 7034 1 chr5D.!!$R1 7033
1 TraesCS5D01G095300 chr5D 444237817 444238427 610 False 876.0 876 93.171000 6445 7034 1 chr5D.!!$F1 589
2 TraesCS5D01G095300 chr5B 114431653 114437335 5682 False 9664.0 9664 97.391000 778 6455 1 chr5B.!!$F1 5677
3 TraesCS5D01G095300 chr5A 108585344 108589666 4322 False 2104.0 2667 93.561667 2194 6445 3 chr5A.!!$F2 4251
4 TraesCS5D01G095300 chr5A 108577464 108578853 1389 False 990.5 1831 92.589000 444 2051 2 chr5A.!!$F1 1607
5 TraesCS5D01G095300 chr2D 12108191 12108762 571 False 881.0 881 94.118000 6443 7034 1 chr2D.!!$F1 591
6 TraesCS5D01G095300 chr2D 606296642 606297203 561 False 880.0 880 94.521000 6452 7034 1 chr2D.!!$F3 582
7 TraesCS5D01G095300 chr2D 616112014 616112574 560 False 841.0 841 93.220000 6446 7034 1 chr2D.!!$F4 588
8 TraesCS5D01G095300 chrUn 26529410 26529976 566 False 872.0 872 94.068000 6448 7034 1 chrUn.!!$F1 586
9 TraesCS5D01G095300 chrUn 28497222 28497784 562 True 865.0 865 94.027000 6452 7034 1 chrUn.!!$R1 582
10 TraesCS5D01G095300 chrUn 29247229 29247791 562 False 859.0 859 93.857000 6452 7034 1 chrUn.!!$F2 582
11 TraesCS5D01G095300 chr6D 329856065 329856627 562 True 870.0 870 94.198000 6452 7034 1 chr6D.!!$R2 582
12 TraesCS5D01G095300 chr6D 21440798 21441388 590 True 817.0 817 92.040000 6454 7034 1 chr6D.!!$R1 580
13 TraesCS5D01G095300 chr1D 57312615 57313178 563 True 859.0 859 93.857000 6452 7034 1 chr1D.!!$R1 582
14 TraesCS5D01G095300 chr7D 112525323 112525928 605 True 854.0 854 92.659000 6447 7034 1 chr7D.!!$R2 587
15 TraesCS5D01G095300 chr3D 7189626 7190230 604 False 817.0 817 91.475000 6443 7034 1 chr3D.!!$F1 591
16 TraesCS5D01G095300 chr3D 57229246 57229797 551 True 798.0 798 92.321000 6452 7034 1 chr3D.!!$R1 582
17 TraesCS5D01G095300 chr4D 9266212 9266790 578 False 802.0 802 91.652000 6452 7034 1 chr4D.!!$F1 582

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
134 135 0.037605 GACCGAGTCCACGTTCCATT 60.038 55.000 0.00 0.00 0.00 3.16 F
212 213 0.105964 TCGCACACAGTTGCCTAGTT 59.894 50.000 0.00 0.00 39.53 2.24 F
927 928 0.550914 ACCAGGCCTTGACTTTGACA 59.449 50.000 11.55 0.00 0.00 3.58 F
928 929 1.145738 ACCAGGCCTTGACTTTGACAT 59.854 47.619 11.55 0.00 0.00 3.06 F
2502 2561 0.324285 CAGAGCCTGGAGTTTCAGCT 59.676 55.000 0.00 0.00 33.64 4.24 F
2616 2678 0.384309 CTGGCAGTCTTACGGCGATA 59.616 55.000 16.62 0.00 40.24 2.92 F
2649 2711 1.009903 CAACATAACGACGACGGCCA 61.010 55.000 12.58 0.00 44.46 5.36 F
3193 3258 1.771255 AGCAGAACCTCAGAAACACCT 59.229 47.619 0.00 0.00 0.00 4.00 F
3194 3259 2.173569 AGCAGAACCTCAGAAACACCTT 59.826 45.455 0.00 0.00 0.00 3.50 F
3195 3260 2.550180 GCAGAACCTCAGAAACACCTTC 59.450 50.000 0.00 0.00 0.00 3.46 F
5694 5867 2.498726 CAGAAGCTCTCCGAGGGC 59.501 66.667 12.76 12.76 0.00 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1403 1419 0.324091 GTAGAGGTGGAAGGACGGGA 60.324 60.000 0.00 0.0 0.00 5.14 R
1743 1769 1.021390 AGCGGTTCAAGGCGAATCTG 61.021 55.000 0.00 0.0 35.63 2.90 R
2500 2559 0.031178 CAACTGGTGTGCCTGAAAGC 59.969 55.000 0.00 0.0 37.43 3.51 R
2505 2564 0.390124 AATTGCAACTGGTGTGCCTG 59.610 50.000 0.00 0.0 39.33 4.85 R
4265 4378 5.005740 GCTATTTGCCATCCATGTATCTGA 58.994 41.667 0.00 0.0 35.15 3.27 R
4825 4940 5.129634 TGTGCTTCTCTAAAATGTTGTCCA 58.870 37.500 0.00 0.0 0.00 4.02 R
5057 5221 3.325716 AGAGCATCCAAAAACATGGCTTT 59.674 39.130 0.00 0.0 40.46 3.51 R
5247 5418 1.135721 GGCAGATGGATGAGGTTTTGC 59.864 52.381 0.00 0.0 0.00 3.68 R
5694 5867 3.190744 AGTCAGCAATGCTCTCAATGTTG 59.809 43.478 4.03 0.0 36.40 3.33 R
5748 5921 1.903183 AGCTCTGTAACCTTCCAGACC 59.097 52.381 0.00 0.0 34.20 3.85 R
6644 6842 1.901464 CACCAACCGGGACCAAAGG 60.901 63.158 6.32 0.0 41.15 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 9.527157 TTGGTGATAAAACCTTAAGAATCATCA 57.473 29.630 3.36 8.40 41.16 3.07
30 31 8.956426 TGGTGATAAAACCTTAAGAATCATCAC 58.044 33.333 18.71 18.71 41.16 3.06
31 32 8.122952 GGTGATAAAACCTTAAGAATCATCACG 58.877 37.037 19.44 0.00 40.24 4.35
32 33 8.665685 GTGATAAAACCTTAAGAATCATCACGT 58.334 33.333 3.36 0.00 32.96 4.49
33 34 9.226606 TGATAAAACCTTAAGAATCATCACGTT 57.773 29.630 3.36 0.00 0.00 3.99
38 39 9.449719 AAACCTTAAGAATCATCACGTTAATCT 57.550 29.630 3.36 0.00 0.00 2.40
40 41 9.751542 ACCTTAAGAATCATCACGTTAATCTAG 57.248 33.333 3.36 0.00 0.00 2.43
41 42 9.751542 CCTTAAGAATCATCACGTTAATCTAGT 57.248 33.333 3.36 0.00 0.00 2.57
43 44 7.470289 AAGAATCATCACGTTAATCTAGTGC 57.530 36.000 0.00 0.00 35.97 4.40
44 45 5.986135 AGAATCATCACGTTAATCTAGTGCC 59.014 40.000 0.00 0.00 35.97 5.01
45 46 5.537300 ATCATCACGTTAATCTAGTGCCT 57.463 39.130 0.00 0.00 35.97 4.75
46 47 4.933330 TCATCACGTTAATCTAGTGCCTC 58.067 43.478 0.00 0.00 35.97 4.70
47 48 4.401202 TCATCACGTTAATCTAGTGCCTCA 59.599 41.667 0.00 0.00 35.97 3.86
48 49 4.371855 TCACGTTAATCTAGTGCCTCAG 57.628 45.455 0.00 0.00 35.97 3.35
49 50 2.860735 CACGTTAATCTAGTGCCTCAGC 59.139 50.000 0.00 0.00 40.48 4.26
50 51 2.159085 ACGTTAATCTAGTGCCTCAGCC 60.159 50.000 0.00 0.00 38.69 4.85
51 52 2.803492 CGTTAATCTAGTGCCTCAGCCC 60.803 54.545 0.00 0.00 38.69 5.19
52 53 1.424638 TAATCTAGTGCCTCAGCCCC 58.575 55.000 0.00 0.00 38.69 5.80
53 54 1.348775 AATCTAGTGCCTCAGCCCCC 61.349 60.000 0.00 0.00 38.69 5.40
86 87 2.656947 AAAAACTAGTGCCTCAGCCA 57.343 45.000 0.00 0.00 38.69 4.75
87 88 2.887151 AAAACTAGTGCCTCAGCCAT 57.113 45.000 0.00 0.00 38.69 4.40
88 89 2.409948 AAACTAGTGCCTCAGCCATC 57.590 50.000 0.00 0.00 38.69 3.51
89 90 1.577736 AACTAGTGCCTCAGCCATCT 58.422 50.000 0.00 0.00 38.69 2.90
90 91 2.461300 ACTAGTGCCTCAGCCATCTA 57.539 50.000 0.00 0.00 38.69 1.98
91 92 2.752030 ACTAGTGCCTCAGCCATCTAA 58.248 47.619 0.00 0.00 38.69 2.10
92 93 3.107601 ACTAGTGCCTCAGCCATCTAAA 58.892 45.455 0.00 0.00 38.69 1.85
93 94 3.519510 ACTAGTGCCTCAGCCATCTAAAA 59.480 43.478 0.00 0.00 38.69 1.52
94 95 3.659183 AGTGCCTCAGCCATCTAAAAT 57.341 42.857 0.00 0.00 38.69 1.82
95 96 4.778213 AGTGCCTCAGCCATCTAAAATA 57.222 40.909 0.00 0.00 38.69 1.40
96 97 5.116084 AGTGCCTCAGCCATCTAAAATAA 57.884 39.130 0.00 0.00 38.69 1.40
97 98 5.509498 AGTGCCTCAGCCATCTAAAATAAA 58.491 37.500 0.00 0.00 38.69 1.40
98 99 5.358160 AGTGCCTCAGCCATCTAAAATAAAC 59.642 40.000 0.00 0.00 38.69 2.01
99 100 4.644685 TGCCTCAGCCATCTAAAATAAACC 59.355 41.667 0.00 0.00 38.69 3.27
100 101 4.889995 GCCTCAGCCATCTAAAATAAACCT 59.110 41.667 0.00 0.00 0.00 3.50
101 102 5.221126 GCCTCAGCCATCTAAAATAAACCTG 60.221 44.000 0.00 0.00 0.00 4.00
102 103 5.300286 CCTCAGCCATCTAAAATAAACCTGG 59.700 44.000 0.00 0.00 0.00 4.45
103 104 5.826643 TCAGCCATCTAAAATAAACCTGGT 58.173 37.500 0.00 0.00 0.00 4.00
104 105 5.652014 TCAGCCATCTAAAATAAACCTGGTG 59.348 40.000 0.00 0.00 0.00 4.17
105 106 4.402474 AGCCATCTAAAATAAACCTGGTGC 59.598 41.667 0.00 0.00 0.00 5.01
106 107 4.441495 GCCATCTAAAATAAACCTGGTGCC 60.441 45.833 0.00 0.00 0.00 5.01
107 108 4.956075 CCATCTAAAATAAACCTGGTGCCT 59.044 41.667 0.00 0.00 0.00 4.75
108 109 5.067805 CCATCTAAAATAAACCTGGTGCCTC 59.932 44.000 0.00 0.00 0.00 4.70
109 110 5.249780 TCTAAAATAAACCTGGTGCCTCA 57.750 39.130 0.00 0.00 0.00 3.86
110 111 5.253330 TCTAAAATAAACCTGGTGCCTCAG 58.747 41.667 0.00 0.00 34.70 3.35
111 112 1.839424 AATAAACCTGGTGCCTCAGC 58.161 50.000 0.00 0.00 40.48 4.26
112 113 0.995024 ATAAACCTGGTGCCTCAGCT 59.005 50.000 0.00 0.00 40.80 4.24
113 114 0.771127 TAAACCTGGTGCCTCAGCTT 59.229 50.000 0.00 0.00 40.80 3.74
114 115 0.771127 AAACCTGGTGCCTCAGCTTA 59.229 50.000 0.00 0.00 40.80 3.09
115 116 0.326264 AACCTGGTGCCTCAGCTTAG 59.674 55.000 0.00 0.00 40.80 2.18
116 117 0.545309 ACCTGGTGCCTCAGCTTAGA 60.545 55.000 0.00 0.00 40.80 2.10
117 118 0.107945 CCTGGTGCCTCAGCTTAGAC 60.108 60.000 0.00 0.00 40.80 2.59
118 119 0.107945 CTGGTGCCTCAGCTTAGACC 60.108 60.000 0.00 0.00 40.80 3.85
119 120 1.153549 GGTGCCTCAGCTTAGACCG 60.154 63.158 0.00 0.00 40.80 4.79
120 121 1.605058 GGTGCCTCAGCTTAGACCGA 61.605 60.000 0.00 0.00 40.80 4.69
121 122 0.179124 GTGCCTCAGCTTAGACCGAG 60.179 60.000 0.00 0.00 40.80 4.63
122 123 0.612174 TGCCTCAGCTTAGACCGAGT 60.612 55.000 0.00 0.00 40.80 4.18
123 124 0.101579 GCCTCAGCTTAGACCGAGTC 59.898 60.000 0.00 0.00 35.50 3.36
124 125 0.741915 CCTCAGCTTAGACCGAGTCC 59.258 60.000 0.00 0.00 32.18 3.85
125 126 1.464734 CTCAGCTTAGACCGAGTCCA 58.535 55.000 0.00 0.00 32.18 4.02
126 127 1.133407 CTCAGCTTAGACCGAGTCCAC 59.867 57.143 0.00 0.00 32.18 4.02
127 128 0.179161 CAGCTTAGACCGAGTCCACG 60.179 60.000 0.00 0.00 32.18 4.94
128 129 0.608582 AGCTTAGACCGAGTCCACGT 60.609 55.000 1.06 0.00 32.18 4.49
129 130 0.243095 GCTTAGACCGAGTCCACGTT 59.757 55.000 0.00 0.00 32.18 3.99
130 131 1.731750 GCTTAGACCGAGTCCACGTTC 60.732 57.143 0.00 0.00 32.18 3.95
131 132 0.883833 TTAGACCGAGTCCACGTTCC 59.116 55.000 0.00 0.00 32.18 3.62
132 133 0.250858 TAGACCGAGTCCACGTTCCA 60.251 55.000 0.00 0.00 32.18 3.53
133 134 0.898789 AGACCGAGTCCACGTTCCAT 60.899 55.000 0.00 0.00 32.18 3.41
134 135 0.037605 GACCGAGTCCACGTTCCATT 60.038 55.000 0.00 0.00 0.00 3.16
135 136 0.395312 ACCGAGTCCACGTTCCATTT 59.605 50.000 0.00 0.00 0.00 2.32
136 137 1.619827 ACCGAGTCCACGTTCCATTTA 59.380 47.619 0.00 0.00 0.00 1.40
137 138 2.235402 ACCGAGTCCACGTTCCATTTAT 59.765 45.455 0.00 0.00 0.00 1.40
138 139 3.448301 ACCGAGTCCACGTTCCATTTATA 59.552 43.478 0.00 0.00 0.00 0.98
139 140 4.100498 ACCGAGTCCACGTTCCATTTATAT 59.900 41.667 0.00 0.00 0.00 0.86
140 141 5.054477 CCGAGTCCACGTTCCATTTATATT 58.946 41.667 0.00 0.00 0.00 1.28
141 142 5.176958 CCGAGTCCACGTTCCATTTATATTC 59.823 44.000 0.00 0.00 0.00 1.75
142 143 5.751509 CGAGTCCACGTTCCATTTATATTCA 59.248 40.000 0.00 0.00 0.00 2.57
143 144 6.074302 CGAGTCCACGTTCCATTTATATTCAG 60.074 42.308 0.00 0.00 0.00 3.02
144 145 6.884832 AGTCCACGTTCCATTTATATTCAGA 58.115 36.000 0.00 0.00 0.00 3.27
145 146 6.986817 AGTCCACGTTCCATTTATATTCAGAG 59.013 38.462 0.00 0.00 0.00 3.35
146 147 6.761714 GTCCACGTTCCATTTATATTCAGAGT 59.238 38.462 0.00 0.00 0.00 3.24
147 148 7.280205 GTCCACGTTCCATTTATATTCAGAGTT 59.720 37.037 0.00 0.00 0.00 3.01
148 149 7.827236 TCCACGTTCCATTTATATTCAGAGTTT 59.173 33.333 0.00 0.00 0.00 2.66
149 150 8.122952 CCACGTTCCATTTATATTCAGAGTTTC 58.877 37.037 0.00 0.00 0.00 2.78
150 151 8.664798 CACGTTCCATTTATATTCAGAGTTTCA 58.335 33.333 0.00 0.00 0.00 2.69
151 152 8.883731 ACGTTCCATTTATATTCAGAGTTTCAG 58.116 33.333 0.00 0.00 0.00 3.02
152 153 9.098355 CGTTCCATTTATATTCAGAGTTTCAGA 57.902 33.333 0.00 0.00 0.00 3.27
158 159 8.703604 TTTATATTCAGAGTTTCAGACTTCGG 57.296 34.615 0.00 0.00 39.19 4.30
159 160 4.873746 ATTCAGAGTTTCAGACTTCGGA 57.126 40.909 0.00 0.00 39.19 4.55
160 161 4.665833 TTCAGAGTTTCAGACTTCGGAA 57.334 40.909 0.00 0.00 39.19 4.30
161 162 4.244425 TCAGAGTTTCAGACTTCGGAAG 57.756 45.455 15.96 15.96 39.19 3.46
162 163 3.005897 TCAGAGTTTCAGACTTCGGAAGG 59.994 47.826 20.97 4.61 39.19 3.46
163 164 2.070028 GAGTTTCAGACTTCGGAAGGC 58.930 52.381 20.97 18.65 39.19 4.35
168 169 4.921834 GACTTCGGAAGGCTGGAG 57.078 61.111 20.97 0.00 32.23 3.86
169 170 1.976112 GACTTCGGAAGGCTGGAGT 59.024 57.895 20.97 0.00 42.12 3.85
170 171 1.183549 GACTTCGGAAGGCTGGAGTA 58.816 55.000 20.97 0.00 39.42 2.59
171 172 1.135333 GACTTCGGAAGGCTGGAGTAG 59.865 57.143 20.97 0.00 39.42 2.57
172 173 1.187087 CTTCGGAAGGCTGGAGTAGT 58.813 55.000 9.93 0.00 0.00 2.73
173 174 0.895530 TTCGGAAGGCTGGAGTAGTG 59.104 55.000 0.00 0.00 0.00 2.74
174 175 0.251653 TCGGAAGGCTGGAGTAGTGT 60.252 55.000 0.00 0.00 0.00 3.55
175 176 1.005097 TCGGAAGGCTGGAGTAGTGTA 59.995 52.381 0.00 0.00 0.00 2.90
176 177 1.134560 CGGAAGGCTGGAGTAGTGTAC 59.865 57.143 0.00 0.00 0.00 2.90
177 178 2.458620 GGAAGGCTGGAGTAGTGTACT 58.541 52.381 0.00 0.00 42.86 2.73
178 179 2.832733 GGAAGGCTGGAGTAGTGTACTT 59.167 50.000 0.00 0.00 39.59 2.24
179 180 3.368531 GGAAGGCTGGAGTAGTGTACTTG 60.369 52.174 0.00 0.00 39.59 3.16
180 181 2.890814 AGGCTGGAGTAGTGTACTTGT 58.109 47.619 0.00 0.00 39.59 3.16
181 182 3.240302 AGGCTGGAGTAGTGTACTTGTT 58.760 45.455 0.00 0.00 39.59 2.83
182 183 3.646637 AGGCTGGAGTAGTGTACTTGTTT 59.353 43.478 0.00 0.00 39.59 2.83
183 184 3.995048 GGCTGGAGTAGTGTACTTGTTTC 59.005 47.826 0.00 0.00 39.59 2.78
184 185 4.262506 GGCTGGAGTAGTGTACTTGTTTCT 60.263 45.833 0.00 0.00 39.59 2.52
185 186 4.924462 GCTGGAGTAGTGTACTTGTTTCTC 59.076 45.833 0.00 0.00 39.59 2.87
186 187 5.117355 TGGAGTAGTGTACTTGTTTCTCG 57.883 43.478 0.00 0.00 39.59 4.04
187 188 4.581824 TGGAGTAGTGTACTTGTTTCTCGT 59.418 41.667 0.00 0.00 39.59 4.18
188 189 5.764686 TGGAGTAGTGTACTTGTTTCTCGTA 59.235 40.000 0.00 0.00 39.59 3.43
189 190 6.082984 GGAGTAGTGTACTTGTTTCTCGTAC 58.917 44.000 0.00 0.00 39.59 3.67
190 191 6.293626 GGAGTAGTGTACTTGTTTCTCGTACA 60.294 42.308 0.00 0.00 40.62 2.90
191 192 7.211966 AGTAGTGTACTTGTTTCTCGTACAT 57.788 36.000 5.00 0.00 43.49 2.29
192 193 8.327941 AGTAGTGTACTTGTTTCTCGTACATA 57.672 34.615 5.00 0.00 43.49 2.29
193 194 8.954350 AGTAGTGTACTTGTTTCTCGTACATAT 58.046 33.333 5.00 1.35 43.49 1.78
194 195 9.219497 GTAGTGTACTTGTTTCTCGTACATATC 57.781 37.037 5.00 0.00 43.49 1.63
195 196 6.965500 AGTGTACTTGTTTCTCGTACATATCG 59.035 38.462 5.00 0.00 43.49 2.92
196 197 5.740569 TGTACTTGTTTCTCGTACATATCGC 59.259 40.000 0.00 0.00 38.72 4.58
197 198 4.740268 ACTTGTTTCTCGTACATATCGCA 58.260 39.130 0.00 0.00 0.00 5.10
198 199 4.561606 ACTTGTTTCTCGTACATATCGCAC 59.438 41.667 0.00 0.00 0.00 5.34
199 200 4.099380 TGTTTCTCGTACATATCGCACA 57.901 40.909 0.00 0.00 0.00 4.57
200 201 3.855379 TGTTTCTCGTACATATCGCACAC 59.145 43.478 0.00 0.00 0.00 3.82
201 202 3.768468 TTCTCGTACATATCGCACACA 57.232 42.857 0.00 0.00 0.00 3.72
202 203 3.334272 TCTCGTACATATCGCACACAG 57.666 47.619 0.00 0.00 0.00 3.66
203 204 2.681344 TCTCGTACATATCGCACACAGT 59.319 45.455 0.00 0.00 0.00 3.55
204 205 3.128068 TCTCGTACATATCGCACACAGTT 59.872 43.478 0.00 0.00 0.00 3.16
205 206 3.175929 TCGTACATATCGCACACAGTTG 58.824 45.455 0.00 0.00 0.00 3.16
206 207 2.285026 CGTACATATCGCACACAGTTGC 60.285 50.000 0.00 0.00 39.28 4.17
207 208 1.086696 ACATATCGCACACAGTTGCC 58.913 50.000 3.14 0.00 39.53 4.52
208 209 1.339055 ACATATCGCACACAGTTGCCT 60.339 47.619 3.14 0.00 39.53 4.75
209 210 2.093711 ACATATCGCACACAGTTGCCTA 60.094 45.455 3.14 0.00 39.53 3.93
210 211 2.293677 TATCGCACACAGTTGCCTAG 57.706 50.000 3.14 0.00 39.53 3.02
211 212 0.321671 ATCGCACACAGTTGCCTAGT 59.678 50.000 0.00 0.00 39.53 2.57
212 213 0.105964 TCGCACACAGTTGCCTAGTT 59.894 50.000 0.00 0.00 39.53 2.24
213 214 1.341852 TCGCACACAGTTGCCTAGTTA 59.658 47.619 0.00 0.00 39.53 2.24
214 215 1.726791 CGCACACAGTTGCCTAGTTAG 59.273 52.381 0.00 0.00 39.53 2.34
215 216 2.767505 GCACACAGTTGCCTAGTTAGT 58.232 47.619 0.00 0.00 36.42 2.24
216 217 3.613193 CGCACACAGTTGCCTAGTTAGTA 60.613 47.826 0.00 0.00 39.53 1.82
217 218 3.927142 GCACACAGTTGCCTAGTTAGTAG 59.073 47.826 0.00 0.00 36.42 2.57
218 219 4.321750 GCACACAGTTGCCTAGTTAGTAGA 60.322 45.833 0.00 0.00 36.42 2.59
219 220 5.403246 CACACAGTTGCCTAGTTAGTAGAG 58.597 45.833 0.00 0.00 0.00 2.43
220 221 5.047943 CACACAGTTGCCTAGTTAGTAGAGT 60.048 44.000 0.00 0.00 0.00 3.24
221 222 6.150641 CACACAGTTGCCTAGTTAGTAGAGTA 59.849 42.308 0.00 0.00 0.00 2.59
222 223 6.374894 ACACAGTTGCCTAGTTAGTAGAGTAG 59.625 42.308 0.00 0.00 0.00 2.57
223 224 6.374894 CACAGTTGCCTAGTTAGTAGAGTAGT 59.625 42.308 0.00 0.00 0.00 2.73
224 225 7.551974 CACAGTTGCCTAGTTAGTAGAGTAGTA 59.448 40.741 0.00 0.00 0.00 1.82
225 226 7.769970 ACAGTTGCCTAGTTAGTAGAGTAGTAG 59.230 40.741 0.00 0.00 0.00 2.57
226 227 7.769970 CAGTTGCCTAGTTAGTAGAGTAGTAGT 59.230 40.741 0.00 0.00 0.00 2.73
227 228 7.986889 AGTTGCCTAGTTAGTAGAGTAGTAGTC 59.013 40.741 0.00 0.00 0.00 2.59
228 229 6.511416 TGCCTAGTTAGTAGAGTAGTAGTCG 58.489 44.000 0.00 0.00 0.00 4.18
229 230 5.925969 GCCTAGTTAGTAGAGTAGTAGTCGG 59.074 48.000 0.00 0.00 0.00 4.79
230 231 6.462347 GCCTAGTTAGTAGAGTAGTAGTCGGT 60.462 46.154 0.00 0.00 0.00 4.69
231 232 7.255660 GCCTAGTTAGTAGAGTAGTAGTCGGTA 60.256 44.444 0.00 0.00 0.00 4.02
232 233 8.634444 CCTAGTTAGTAGAGTAGTAGTCGGTAA 58.366 40.741 0.00 0.00 0.00 2.85
235 236 7.865385 AGTTAGTAGAGTAGTAGTCGGTAATCG 59.135 40.741 0.00 0.00 40.90 3.34
236 237 5.537188 AGTAGAGTAGTAGTCGGTAATCGG 58.463 45.833 0.00 0.00 39.77 4.18
237 238 4.414337 AGAGTAGTAGTCGGTAATCGGT 57.586 45.455 0.00 0.00 39.77 4.69
238 239 5.537300 AGAGTAGTAGTCGGTAATCGGTA 57.463 43.478 0.00 0.00 39.77 4.02
239 240 5.293560 AGAGTAGTAGTCGGTAATCGGTAC 58.706 45.833 0.00 0.00 39.77 3.34
240 241 5.069781 AGAGTAGTAGTCGGTAATCGGTACT 59.930 44.000 0.00 0.00 40.04 2.73
241 242 5.293560 AGTAGTAGTCGGTAATCGGTACTC 58.706 45.833 0.00 0.00 38.77 2.59
242 243 4.414337 AGTAGTCGGTAATCGGTACTCT 57.586 45.455 0.00 0.00 35.56 3.24
243 244 4.376146 AGTAGTCGGTAATCGGTACTCTC 58.624 47.826 0.00 0.00 35.56 3.20
244 245 3.272574 AGTCGGTAATCGGTACTCTCA 57.727 47.619 0.00 0.00 39.77 3.27
245 246 3.818180 AGTCGGTAATCGGTACTCTCAT 58.182 45.455 0.00 0.00 39.77 2.90
246 247 3.564644 AGTCGGTAATCGGTACTCTCATG 59.435 47.826 0.00 0.00 39.77 3.07
247 248 3.314635 GTCGGTAATCGGTACTCTCATGT 59.685 47.826 0.00 0.00 39.77 3.21
248 249 3.314357 TCGGTAATCGGTACTCTCATGTG 59.686 47.826 0.00 0.00 39.77 3.21
249 250 3.314357 CGGTAATCGGTACTCTCATGTGA 59.686 47.826 0.00 0.00 32.80 3.58
250 251 4.201980 CGGTAATCGGTACTCTCATGTGAA 60.202 45.833 0.00 0.00 32.80 3.18
251 252 5.041940 GGTAATCGGTACTCTCATGTGAAC 58.958 45.833 0.00 0.00 32.80 3.18
252 253 5.163540 GGTAATCGGTACTCTCATGTGAACT 60.164 44.000 0.00 0.00 32.80 3.01
253 254 6.039047 GGTAATCGGTACTCTCATGTGAACTA 59.961 42.308 0.00 0.00 32.80 2.24
254 255 6.525578 AATCGGTACTCTCATGTGAACTAA 57.474 37.500 0.00 0.00 0.00 2.24
255 256 6.716934 ATCGGTACTCTCATGTGAACTAAT 57.283 37.500 0.00 0.00 0.00 1.73
256 257 5.891451 TCGGTACTCTCATGTGAACTAATG 58.109 41.667 0.00 0.00 0.00 1.90
257 258 5.417894 TCGGTACTCTCATGTGAACTAATGT 59.582 40.000 0.00 0.00 0.00 2.71
258 259 6.600427 TCGGTACTCTCATGTGAACTAATGTA 59.400 38.462 0.00 0.00 0.00 2.29
259 260 7.284716 TCGGTACTCTCATGTGAACTAATGTAT 59.715 37.037 0.00 0.00 0.00 2.29
260 261 7.379797 CGGTACTCTCATGTGAACTAATGTATG 59.620 40.741 0.00 0.00 0.00 2.39
261 262 7.653713 GGTACTCTCATGTGAACTAATGTATGG 59.346 40.741 0.00 0.00 0.00 2.74
262 263 7.187824 ACTCTCATGTGAACTAATGTATGGT 57.812 36.000 0.00 0.00 0.00 3.55
263 264 7.624549 ACTCTCATGTGAACTAATGTATGGTT 58.375 34.615 0.00 0.00 0.00 3.67
264 265 7.550551 ACTCTCATGTGAACTAATGTATGGTTG 59.449 37.037 0.00 0.00 0.00 3.77
265 266 6.823182 TCTCATGTGAACTAATGTATGGTTGG 59.177 38.462 0.00 0.00 0.00 3.77
266 267 6.480763 TCATGTGAACTAATGTATGGTTGGT 58.519 36.000 0.00 0.00 0.00 3.67
267 268 6.945435 TCATGTGAACTAATGTATGGTTGGTT 59.055 34.615 0.00 0.00 33.70 3.67
268 269 6.567687 TGTGAACTAATGTATGGTTGGTTG 57.432 37.500 0.00 0.00 31.59 3.77
269 270 5.475220 TGTGAACTAATGTATGGTTGGTTGG 59.525 40.000 0.00 0.00 31.59 3.77
270 271 5.475564 GTGAACTAATGTATGGTTGGTTGGT 59.524 40.000 0.00 0.00 31.59 3.67
271 272 6.015772 GTGAACTAATGTATGGTTGGTTGGTT 60.016 38.462 0.00 0.00 31.59 3.67
272 273 7.175293 GTGAACTAATGTATGGTTGGTTGGTTA 59.825 37.037 0.00 0.00 31.59 2.85
273 274 7.392113 TGAACTAATGTATGGTTGGTTGGTTAG 59.608 37.037 0.00 0.00 31.59 2.34
274 275 7.023171 ACTAATGTATGGTTGGTTGGTTAGA 57.977 36.000 0.00 0.00 0.00 2.10
275 276 7.463431 ACTAATGTATGGTTGGTTGGTTAGAA 58.537 34.615 0.00 0.00 0.00 2.10
276 277 6.834168 AATGTATGGTTGGTTGGTTAGAAG 57.166 37.500 0.00 0.00 0.00 2.85
277 278 4.658063 TGTATGGTTGGTTGGTTAGAAGG 58.342 43.478 0.00 0.00 0.00 3.46
278 279 2.668144 TGGTTGGTTGGTTAGAAGGG 57.332 50.000 0.00 0.00 0.00 3.95
279 280 1.254026 GGTTGGTTGGTTAGAAGGGC 58.746 55.000 0.00 0.00 0.00 5.19
280 281 1.479757 GGTTGGTTGGTTAGAAGGGCA 60.480 52.381 0.00 0.00 0.00 5.36
281 282 2.312390 GTTGGTTGGTTAGAAGGGCAA 58.688 47.619 0.00 0.00 0.00 4.52
282 283 2.897326 GTTGGTTGGTTAGAAGGGCAAT 59.103 45.455 0.00 0.00 0.00 3.56
283 284 2.524306 TGGTTGGTTAGAAGGGCAATG 58.476 47.619 0.00 0.00 0.00 2.82
284 285 1.824852 GGTTGGTTAGAAGGGCAATGG 59.175 52.381 0.00 0.00 0.00 3.16
285 286 2.525368 GTTGGTTAGAAGGGCAATGGT 58.475 47.619 0.00 0.00 0.00 3.55
286 287 3.562609 GGTTGGTTAGAAGGGCAATGGTA 60.563 47.826 0.00 0.00 0.00 3.25
287 288 4.278310 GTTGGTTAGAAGGGCAATGGTAT 58.722 43.478 0.00 0.00 0.00 2.73
288 289 4.601406 TGGTTAGAAGGGCAATGGTATT 57.399 40.909 0.00 0.00 0.00 1.89
289 290 4.941713 TGGTTAGAAGGGCAATGGTATTT 58.058 39.130 0.00 0.00 0.00 1.40
290 291 6.080969 TGGTTAGAAGGGCAATGGTATTTA 57.919 37.500 0.00 0.00 0.00 1.40
291 292 6.126409 TGGTTAGAAGGGCAATGGTATTTAG 58.874 40.000 0.00 0.00 0.00 1.85
292 293 6.069323 TGGTTAGAAGGGCAATGGTATTTAGA 60.069 38.462 0.00 0.00 0.00 2.10
293 294 6.831868 GGTTAGAAGGGCAATGGTATTTAGAA 59.168 38.462 0.00 0.00 0.00 2.10
294 295 7.201794 GGTTAGAAGGGCAATGGTATTTAGAAC 60.202 40.741 0.00 0.00 0.00 3.01
295 296 6.079712 AGAAGGGCAATGGTATTTAGAACT 57.920 37.500 0.00 0.00 0.00 3.01
296 297 6.122964 AGAAGGGCAATGGTATTTAGAACTC 58.877 40.000 0.00 0.00 0.00 3.01
297 298 5.450818 AGGGCAATGGTATTTAGAACTCA 57.549 39.130 0.00 0.00 0.00 3.41
298 299 6.018433 AGGGCAATGGTATTTAGAACTCAT 57.982 37.500 0.00 0.00 0.00 2.90
299 300 6.064717 AGGGCAATGGTATTTAGAACTCATC 58.935 40.000 0.00 0.00 0.00 2.92
300 301 5.049405 GGGCAATGGTATTTAGAACTCATCG 60.049 44.000 0.00 0.00 0.00 3.84
301 302 5.049405 GGCAATGGTATTTAGAACTCATCGG 60.049 44.000 0.00 0.00 0.00 4.18
302 303 5.049405 GCAATGGTATTTAGAACTCATCGGG 60.049 44.000 0.00 0.00 0.00 5.14
303 304 6.288294 CAATGGTATTTAGAACTCATCGGGA 58.712 40.000 0.00 0.00 0.00 5.14
304 305 6.688073 ATGGTATTTAGAACTCATCGGGAT 57.312 37.500 0.00 0.00 0.00 3.85
305 306 6.494666 TGGTATTTAGAACTCATCGGGATT 57.505 37.500 0.00 0.00 0.00 3.01
306 307 6.895782 TGGTATTTAGAACTCATCGGGATTT 58.104 36.000 0.00 0.00 0.00 2.17
307 308 8.025270 TGGTATTTAGAACTCATCGGGATTTA 57.975 34.615 0.00 0.00 0.00 1.40
308 309 8.487848 TGGTATTTAGAACTCATCGGGATTTAA 58.512 33.333 0.00 0.00 0.00 1.52
309 310 8.989980 GGTATTTAGAACTCATCGGGATTTAAG 58.010 37.037 0.00 0.00 0.00 1.85
310 311 9.543783 GTATTTAGAACTCATCGGGATTTAAGT 57.456 33.333 0.00 0.00 0.00 2.24
312 313 8.488651 TTTAGAACTCATCGGGATTTAAGTTC 57.511 34.615 14.52 14.52 41.70 3.01
313 314 6.301169 AGAACTCATCGGGATTTAAGTTCT 57.699 37.500 17.06 17.06 44.83 3.01
314 315 7.419711 AGAACTCATCGGGATTTAAGTTCTA 57.580 36.000 19.30 0.00 46.64 2.10
315 316 8.024145 AGAACTCATCGGGATTTAAGTTCTAT 57.976 34.615 19.30 6.65 46.64 1.98
316 317 9.144298 AGAACTCATCGGGATTTAAGTTCTATA 57.856 33.333 19.30 0.00 46.64 1.31
317 318 9.194271 GAACTCATCGGGATTTAAGTTCTATAC 57.806 37.037 14.82 0.00 39.49 1.47
318 319 8.480133 ACTCATCGGGATTTAAGTTCTATACT 57.520 34.615 0.00 0.00 39.32 2.12
320 321 9.197694 CTCATCGGGATTTAAGTTCTATACTTG 57.802 37.037 0.00 0.00 46.46 3.16
321 322 8.920174 TCATCGGGATTTAAGTTCTATACTTGA 58.080 33.333 0.00 0.00 46.46 3.02
322 323 8.979574 CATCGGGATTTAAGTTCTATACTTGAC 58.020 37.037 0.00 0.00 46.46 3.18
323 324 8.070034 TCGGGATTTAAGTTCTATACTTGACA 57.930 34.615 0.00 0.00 46.46 3.58
324 325 8.701895 TCGGGATTTAAGTTCTATACTTGACAT 58.298 33.333 0.00 0.00 46.46 3.06
325 326 9.326413 CGGGATTTAAGTTCTATACTTGACATT 57.674 33.333 0.00 0.00 46.46 2.71
333 334 8.412608 AGTTCTATACTTGACATTGATGTTCG 57.587 34.615 0.00 0.00 35.70 3.95
334 335 8.035394 AGTTCTATACTTGACATTGATGTTCGT 58.965 33.333 0.00 0.00 35.70 3.85
335 336 9.297586 GTTCTATACTTGACATTGATGTTCGTA 57.702 33.333 0.00 1.93 41.95 3.43
340 341 9.817809 ATACTTGACATTGATGTTCGTATTACT 57.182 29.630 0.00 0.00 41.95 2.24
341 342 8.547967 ACTTGACATTGATGTTCGTATTACTT 57.452 30.769 0.00 0.00 41.95 2.24
342 343 8.656849 ACTTGACATTGATGTTCGTATTACTTC 58.343 33.333 0.00 0.00 41.95 3.01
343 344 8.771920 TTGACATTGATGTTCGTATTACTTCT 57.228 30.769 0.00 0.00 41.95 2.85
344 345 8.407457 TGACATTGATGTTCGTATTACTTCTC 57.593 34.615 0.00 0.00 41.95 2.87
345 346 8.032451 TGACATTGATGTTCGTATTACTTCTCA 58.968 33.333 0.00 0.00 41.95 3.27
346 347 8.771920 ACATTGATGTTCGTATTACTTCTCAA 57.228 30.769 0.00 0.00 37.90 3.02
347 348 9.214957 ACATTGATGTTCGTATTACTTCTCAAA 57.785 29.630 0.00 0.00 37.90 2.69
371 372 8.644318 AATTATTTCATTCTTTCAGATGCTGC 57.356 30.769 0.00 0.00 0.00 5.25
372 373 5.654603 ATTTCATTCTTTCAGATGCTGCA 57.345 34.783 4.13 4.13 0.00 4.41
373 374 5.456548 TTTCATTCTTTCAGATGCTGCAA 57.543 34.783 6.36 0.00 0.00 4.08
374 375 4.696899 TCATTCTTTCAGATGCTGCAAG 57.303 40.909 6.36 0.00 36.38 4.01
375 376 4.077108 TCATTCTTTCAGATGCTGCAAGT 58.923 39.130 6.36 0.00 36.43 3.16
376 377 3.909776 TTCTTTCAGATGCTGCAAGTG 57.090 42.857 6.36 7.36 36.43 3.16
377 378 1.538512 TCTTTCAGATGCTGCAAGTGC 59.461 47.619 6.36 0.00 36.43 4.40
387 388 4.874534 GCAAGTGCATGCGTTCAT 57.125 50.000 14.09 0.00 41.59 2.57
388 389 3.994729 GCAAGTGCATGCGTTCATA 57.005 47.368 14.09 0.00 41.59 2.15
389 390 2.261037 GCAAGTGCATGCGTTCATAA 57.739 45.000 14.09 0.00 41.59 1.90
390 391 2.594321 GCAAGTGCATGCGTTCATAAA 58.406 42.857 14.09 0.00 41.59 1.40
391 392 2.985809 GCAAGTGCATGCGTTCATAAAA 59.014 40.909 14.09 0.00 41.59 1.52
392 393 3.428198 GCAAGTGCATGCGTTCATAAAAA 59.572 39.130 14.09 0.00 41.59 1.94
393 394 4.091800 GCAAGTGCATGCGTTCATAAAAAT 59.908 37.500 14.09 0.00 41.59 1.82
394 395 5.543716 CAAGTGCATGCGTTCATAAAAATG 58.456 37.500 14.09 0.00 0.00 2.32
395 396 5.058149 AGTGCATGCGTTCATAAAAATGA 57.942 34.783 14.09 0.00 0.00 2.57
396 397 5.468592 AGTGCATGCGTTCATAAAAATGAA 58.531 33.333 14.09 0.00 38.14 2.57
397 398 6.101332 AGTGCATGCGTTCATAAAAATGAAT 58.899 32.000 14.09 0.00 41.88 2.57
398 399 6.035220 AGTGCATGCGTTCATAAAAATGAATG 59.965 34.615 14.09 13.50 45.55 2.67
399 400 5.868258 TGCATGCGTTCATAAAAATGAATGT 59.132 32.000 14.09 1.59 44.94 2.71
400 401 7.009083 GTGCATGCGTTCATAAAAATGAATGTA 59.991 33.333 14.09 14.55 44.94 2.29
401 402 7.705752 TGCATGCGTTCATAAAAATGAATGTAT 59.294 29.630 14.09 15.78 46.44 2.29
403 404 7.448588 TGCGTTCATAAAAATGAATGTATGC 57.551 32.000 17.22 8.03 44.94 3.14
404 405 7.257003 TGCGTTCATAAAAATGAATGTATGCT 58.743 30.769 17.22 0.00 44.94 3.79
405 406 7.758980 TGCGTTCATAAAAATGAATGTATGCTT 59.241 29.630 17.22 0.00 44.94 3.91
406 407 8.051909 GCGTTCATAAAAATGAATGTATGCTTG 58.948 33.333 17.22 0.00 44.94 4.01
407 408 9.075519 CGTTCATAAAAATGAATGTATGCTTGT 57.924 29.630 10.72 0.00 41.88 3.16
409 410 9.926158 TTCATAAAAATGAATGTATGCTTGTGT 57.074 25.926 0.00 0.00 35.80 3.72
417 418 7.425577 TGAATGTATGCTTGTGTATATGAGC 57.574 36.000 0.00 0.00 35.74 4.26
418 419 6.146021 TGAATGTATGCTTGTGTATATGAGCG 59.854 38.462 0.00 0.00 37.94 5.03
419 420 5.195001 TGTATGCTTGTGTATATGAGCGA 57.805 39.130 0.00 0.00 37.94 4.93
420 421 5.596845 TGTATGCTTGTGTATATGAGCGAA 58.403 37.500 0.00 0.00 37.94 4.70
421 422 6.223120 TGTATGCTTGTGTATATGAGCGAAT 58.777 36.000 0.00 0.00 37.94 3.34
422 423 6.705825 TGTATGCTTGTGTATATGAGCGAATT 59.294 34.615 0.00 0.00 37.94 2.17
423 424 6.624352 ATGCTTGTGTATATGAGCGAATTT 57.376 33.333 0.00 0.00 37.94 1.82
424 425 7.728847 ATGCTTGTGTATATGAGCGAATTTA 57.271 32.000 0.00 0.00 37.94 1.40
425 426 7.546778 TGCTTGTGTATATGAGCGAATTTAA 57.453 32.000 0.00 0.00 37.94 1.52
426 427 8.153479 TGCTTGTGTATATGAGCGAATTTAAT 57.847 30.769 0.00 0.00 37.94 1.40
427 428 8.620416 TGCTTGTGTATATGAGCGAATTTAATT 58.380 29.630 0.00 0.00 37.94 1.40
428 429 8.895845 GCTTGTGTATATGAGCGAATTTAATTG 58.104 33.333 0.00 0.00 0.00 2.32
429 430 9.935682 CTTGTGTATATGAGCGAATTTAATTGT 57.064 29.630 0.00 0.00 0.00 2.71
464 465 7.454260 AAAAATCGGCACTCTTCTAATTCTT 57.546 32.000 0.00 0.00 0.00 2.52
465 466 8.561738 AAAAATCGGCACTCTTCTAATTCTTA 57.438 30.769 0.00 0.00 0.00 2.10
466 467 8.561738 AAAATCGGCACTCTTCTAATTCTTAA 57.438 30.769 0.00 0.00 0.00 1.85
467 468 8.738645 AAATCGGCACTCTTCTAATTCTTAAT 57.261 30.769 0.00 0.00 0.00 1.40
489 490 2.205074 CGTATGCTCCTTTCGCTTGAT 58.795 47.619 0.00 0.00 0.00 2.57
527 528 1.221021 GCGACCCCCGAAATTCTCT 59.779 57.895 0.00 0.00 41.76 3.10
539 540 3.339141 GAAATTCTCTGGCGTTTCCTCT 58.661 45.455 0.00 0.00 35.26 3.69
549 550 1.287425 CGTTTCCTCTGCCGATAACC 58.713 55.000 0.00 0.00 0.00 2.85
550 551 1.404986 CGTTTCCTCTGCCGATAACCA 60.405 52.381 0.00 0.00 0.00 3.67
551 552 2.706890 GTTTCCTCTGCCGATAACCAA 58.293 47.619 0.00 0.00 0.00 3.67
552 553 3.078837 GTTTCCTCTGCCGATAACCAAA 58.921 45.455 0.00 0.00 0.00 3.28
553 554 2.691409 TCCTCTGCCGATAACCAAAG 57.309 50.000 0.00 0.00 0.00 2.77
554 555 1.906574 TCCTCTGCCGATAACCAAAGT 59.093 47.619 0.00 0.00 0.00 2.66
555 556 2.009774 CCTCTGCCGATAACCAAAGTG 58.990 52.381 0.00 0.00 0.00 3.16
556 557 1.398390 CTCTGCCGATAACCAAAGTGC 59.602 52.381 0.00 0.00 0.00 4.40
557 558 1.164411 CTGCCGATAACCAAAGTGCA 58.836 50.000 0.00 0.00 0.00 4.57
558 559 1.745087 CTGCCGATAACCAAAGTGCAT 59.255 47.619 0.00 0.00 0.00 3.96
559 560 2.942376 CTGCCGATAACCAAAGTGCATA 59.058 45.455 0.00 0.00 0.00 3.14
560 561 3.550820 TGCCGATAACCAAAGTGCATAT 58.449 40.909 0.00 0.00 0.00 1.78
561 562 3.314913 TGCCGATAACCAAAGTGCATATG 59.685 43.478 0.00 0.00 0.00 1.78
562 563 3.563808 GCCGATAACCAAAGTGCATATGA 59.436 43.478 6.97 0.00 0.00 2.15
563 564 4.216257 GCCGATAACCAAAGTGCATATGAT 59.784 41.667 6.97 0.00 0.00 2.45
564 565 5.411361 GCCGATAACCAAAGTGCATATGATA 59.589 40.000 6.97 0.00 0.00 2.15
565 566 6.620733 GCCGATAACCAAAGTGCATATGATAC 60.621 42.308 6.97 4.68 0.00 2.24
566 567 6.650807 CCGATAACCAAAGTGCATATGATACT 59.349 38.462 6.97 7.06 0.00 2.12
567 568 7.817478 CCGATAACCAAAGTGCATATGATACTA 59.183 37.037 6.97 0.00 0.00 1.82
568 569 8.864024 CGATAACCAAAGTGCATATGATACTAG 58.136 37.037 6.97 6.46 0.00 2.57
569 570 9.712305 GATAACCAAAGTGCATATGATACTAGT 57.288 33.333 6.97 0.00 0.00 2.57
570 571 7.792374 AACCAAAGTGCATATGATACTAGTG 57.208 36.000 6.97 10.78 0.00 2.74
571 572 6.889198 ACCAAAGTGCATATGATACTAGTGT 58.111 36.000 6.97 0.00 0.00 3.55
572 573 8.018537 ACCAAAGTGCATATGATACTAGTGTA 57.981 34.615 6.97 0.00 0.00 2.90
573 574 8.651389 ACCAAAGTGCATATGATACTAGTGTAT 58.349 33.333 6.97 0.00 41.65 2.29
574 575 8.929746 CCAAAGTGCATATGATACTAGTGTATG 58.070 37.037 6.97 9.68 39.29 2.39
575 576 9.696917 CAAAGTGCATATGATACTAGTGTATGA 57.303 33.333 6.97 0.00 39.29 2.15
576 577 9.698309 AAAGTGCATATGATACTAGTGTATGAC 57.302 33.333 6.97 8.79 39.29 3.06
577 578 8.409358 AGTGCATATGATACTAGTGTATGACA 57.591 34.615 6.97 8.36 39.29 3.58
591 592 6.749216 GTGTATGACACTACATCCGTAATG 57.251 41.667 2.48 0.00 45.27 1.90
592 593 5.175126 GTGTATGACACTACATCCGTAATGC 59.825 44.000 2.48 0.00 45.27 3.56
593 594 3.878160 TGACACTACATCCGTAATGCA 57.122 42.857 0.00 0.00 39.12 3.96
594 595 4.400529 TGACACTACATCCGTAATGCAT 57.599 40.909 0.00 0.00 39.12 3.96
595 596 5.523438 TGACACTACATCCGTAATGCATA 57.477 39.130 0.00 0.00 39.12 3.14
596 597 5.908341 TGACACTACATCCGTAATGCATAA 58.092 37.500 0.00 0.00 39.12 1.90
597 598 6.521162 TGACACTACATCCGTAATGCATAAT 58.479 36.000 0.00 0.00 39.12 1.28
598 599 7.662897 TGACACTACATCCGTAATGCATAATA 58.337 34.615 0.00 0.00 39.12 0.98
599 600 8.311109 TGACACTACATCCGTAATGCATAATAT 58.689 33.333 0.00 0.00 39.12 1.28
600 601 8.703604 ACACTACATCCGTAATGCATAATATC 57.296 34.615 0.00 0.00 39.12 1.63
601 602 8.311109 ACACTACATCCGTAATGCATAATATCA 58.689 33.333 0.00 0.00 39.12 2.15
602 603 9.150348 CACTACATCCGTAATGCATAATATCAA 57.850 33.333 0.00 0.00 39.12 2.57
603 604 9.719355 ACTACATCCGTAATGCATAATATCAAA 57.281 29.630 0.00 0.00 39.12 2.69
606 607 9.066892 ACATCCGTAATGCATAATATCAAAAGT 57.933 29.630 0.00 0.00 39.12 2.66
607 608 9.897744 CATCCGTAATGCATAATATCAAAAGTT 57.102 29.630 0.00 0.00 0.00 2.66
608 609 9.897744 ATCCGTAATGCATAATATCAAAAGTTG 57.102 29.630 0.00 0.00 0.00 3.16
609 610 9.114952 TCCGTAATGCATAATATCAAAAGTTGA 57.885 29.630 0.00 0.00 45.01 3.18
623 624 7.009179 TCAAAAGTTGATATCACAGAGGACT 57.991 36.000 4.48 2.16 34.08 3.85
624 625 7.453393 TCAAAAGTTGATATCACAGAGGACTT 58.547 34.615 4.48 8.52 34.08 3.01
625 626 7.939039 TCAAAAGTTGATATCACAGAGGACTTT 59.061 33.333 18.69 18.69 37.60 2.66
626 627 9.219603 CAAAAGTTGATATCACAGAGGACTTTA 57.780 33.333 22.23 0.00 35.68 1.85
627 628 9.965902 AAAAGTTGATATCACAGAGGACTTTAT 57.034 29.630 22.23 14.05 35.68 1.40
628 629 9.965902 AAAGTTGATATCACAGAGGACTTTATT 57.034 29.630 21.26 6.09 35.16 1.40
629 630 9.965902 AAGTTGATATCACAGAGGACTTTATTT 57.034 29.630 4.48 0.00 0.00 1.40
635 636 7.573968 ATCACAGAGGACTTTATTTATTGCC 57.426 36.000 0.00 0.00 0.00 4.52
636 637 6.480763 TCACAGAGGACTTTATTTATTGCCA 58.519 36.000 0.00 0.00 0.00 4.92
637 638 7.118723 TCACAGAGGACTTTATTTATTGCCAT 58.881 34.615 0.00 0.00 0.00 4.40
638 639 7.067372 TCACAGAGGACTTTATTTATTGCCATG 59.933 37.037 0.00 0.00 0.00 3.66
639 640 6.183360 ACAGAGGACTTTATTTATTGCCATGC 60.183 38.462 0.00 0.00 0.00 4.06
640 641 5.893255 AGAGGACTTTATTTATTGCCATGCA 59.107 36.000 0.00 0.00 36.47 3.96
641 642 6.552350 AGAGGACTTTATTTATTGCCATGCAT 59.448 34.615 0.00 0.00 38.76 3.96
642 643 6.518493 AGGACTTTATTTATTGCCATGCATG 58.482 36.000 20.19 20.19 38.76 4.06
643 644 6.324512 AGGACTTTATTTATTGCCATGCATGA 59.675 34.615 28.31 8.76 38.76 3.07
644 645 7.015877 AGGACTTTATTTATTGCCATGCATGAT 59.984 33.333 28.31 15.63 38.76 2.45
645 646 8.306038 GGACTTTATTTATTGCCATGCATGATA 58.694 33.333 28.31 14.60 38.76 2.15
646 647 9.132521 GACTTTATTTATTGCCATGCATGATAC 57.867 33.333 28.31 16.49 38.76 2.24
647 648 8.640651 ACTTTATTTATTGCCATGCATGATACA 58.359 29.630 28.31 18.81 38.76 2.29
648 649 9.478768 CTTTATTTATTGCCATGCATGATACAA 57.521 29.630 28.31 25.14 38.76 2.41
649 650 9.828039 TTTATTTATTGCCATGCATGATACAAA 57.172 25.926 28.31 18.68 38.76 2.83
650 651 7.956420 ATTTATTGCCATGCATGATACAAAG 57.044 32.000 28.31 10.23 38.76 2.77
651 652 6.468333 TTATTGCCATGCATGATACAAAGT 57.532 33.333 28.31 15.55 38.76 2.66
652 653 7.579761 TTATTGCCATGCATGATACAAAGTA 57.420 32.000 28.31 14.69 38.76 2.24
653 654 5.503662 TTGCCATGCATGATACAAAGTAG 57.496 39.130 28.31 8.01 38.76 2.57
654 655 3.316029 TGCCATGCATGATACAAAGTAGC 59.684 43.478 28.31 17.58 31.71 3.58
655 656 3.316029 GCCATGCATGATACAAAGTAGCA 59.684 43.478 28.31 0.00 34.78 3.49
656 657 4.790766 GCCATGCATGATACAAAGTAGCAC 60.791 45.833 28.31 0.00 32.92 4.40
657 658 4.336153 CCATGCATGATACAAAGTAGCACA 59.664 41.667 28.31 0.00 32.92 4.57
658 659 5.009310 CCATGCATGATACAAAGTAGCACAT 59.991 40.000 28.31 0.00 32.92 3.21
659 660 5.739752 TGCATGATACAAAGTAGCACATC 57.260 39.130 0.00 0.00 0.00 3.06
660 661 5.184711 TGCATGATACAAAGTAGCACATCA 58.815 37.500 0.00 0.00 0.00 3.07
661 662 5.824097 TGCATGATACAAAGTAGCACATCAT 59.176 36.000 0.00 0.00 34.34 2.45
662 663 6.319405 TGCATGATACAAAGTAGCACATCATT 59.681 34.615 0.00 0.00 32.29 2.57
663 664 7.148035 TGCATGATACAAAGTAGCACATCATTT 60.148 33.333 0.00 0.00 32.29 2.32
664 665 8.344831 GCATGATACAAAGTAGCACATCATTTA 58.655 33.333 0.00 0.00 32.29 1.40
675 676 9.371136 AGTAGCACATCATTTAATATGATACGG 57.629 33.333 10.72 6.78 36.69 4.02
676 677 9.151471 GTAGCACATCATTTAATATGATACGGT 57.849 33.333 10.72 11.66 36.69 4.83
678 679 9.890629 AGCACATCATTTAATATGATACGGTAT 57.109 29.630 0.00 0.00 36.69 2.73
703 704 8.891985 TCATGATATGATACTTAAGCCTCTCT 57.108 34.615 1.29 0.00 33.59 3.10
704 705 9.319060 TCATGATATGATACTTAAGCCTCTCTT 57.681 33.333 1.29 0.00 35.09 2.85
705 706 9.941325 CATGATATGATACTTAAGCCTCTCTTT 57.059 33.333 1.29 0.00 36.25 2.52
707 708 9.373450 TGATATGATACTTAAGCCTCTCTTTCT 57.627 33.333 1.29 0.00 36.25 2.52
710 711 7.482169 TGATACTTAAGCCTCTCTTTCTTCA 57.518 36.000 1.29 0.00 36.25 3.02
711 712 8.083828 TGATACTTAAGCCTCTCTTTCTTCAT 57.916 34.615 1.29 0.00 36.25 2.57
712 713 8.543774 TGATACTTAAGCCTCTCTTTCTTCATT 58.456 33.333 1.29 0.00 36.25 2.57
713 714 9.389755 GATACTTAAGCCTCTCTTTCTTCATTT 57.610 33.333 1.29 0.00 36.25 2.32
716 717 9.746457 ACTTAAGCCTCTCTTTCTTCATTTAAT 57.254 29.630 1.29 0.00 36.25 1.40
746 747 8.918202 TGTCACCTCATTAAAATTGTCTAGTT 57.082 30.769 0.00 0.00 0.00 2.24
747 748 8.783093 TGTCACCTCATTAAAATTGTCTAGTTG 58.217 33.333 0.00 0.00 0.00 3.16
748 749 8.237267 GTCACCTCATTAAAATTGTCTAGTTGG 58.763 37.037 0.00 0.00 0.00 3.77
749 750 7.029563 CACCTCATTAAAATTGTCTAGTTGGC 58.970 38.462 0.00 0.00 0.00 4.52
750 751 6.719370 ACCTCATTAAAATTGTCTAGTTGGCA 59.281 34.615 0.00 0.00 0.00 4.92
751 752 7.397192 ACCTCATTAAAATTGTCTAGTTGGCAT 59.603 33.333 0.00 0.00 0.00 4.40
752 753 7.703621 CCTCATTAAAATTGTCTAGTTGGCATG 59.296 37.037 0.00 0.00 0.00 4.06
753 754 7.035004 TCATTAAAATTGTCTAGTTGGCATGC 58.965 34.615 9.90 9.90 0.00 4.06
754 755 4.870123 AAAATTGTCTAGTTGGCATGCA 57.130 36.364 21.36 2.54 0.00 3.96
755 756 5.410355 AAAATTGTCTAGTTGGCATGCAT 57.590 34.783 21.36 4.57 0.00 3.96
756 757 6.528537 AAAATTGTCTAGTTGGCATGCATA 57.471 33.333 21.36 4.71 0.00 3.14
757 758 6.528537 AAATTGTCTAGTTGGCATGCATAA 57.471 33.333 21.36 11.29 0.00 1.90
758 759 6.720112 AATTGTCTAGTTGGCATGCATAAT 57.280 33.333 21.36 8.25 0.00 1.28
759 760 7.822161 AATTGTCTAGTTGGCATGCATAATA 57.178 32.000 21.36 9.00 0.00 0.98
760 761 6.618287 TTGTCTAGTTGGCATGCATAATAC 57.382 37.500 21.36 9.17 0.00 1.89
761 762 5.928976 TGTCTAGTTGGCATGCATAATACT 58.071 37.500 21.36 15.59 0.00 2.12
762 763 5.991606 TGTCTAGTTGGCATGCATAATACTC 59.008 40.000 21.36 4.69 0.00 2.59
763 764 5.409826 GTCTAGTTGGCATGCATAATACTCC 59.590 44.000 21.36 0.00 0.00 3.85
764 765 4.443978 AGTTGGCATGCATAATACTCCT 57.556 40.909 21.36 4.34 0.00 3.69
765 766 5.567037 AGTTGGCATGCATAATACTCCTA 57.433 39.130 21.36 0.00 0.00 2.94
766 767 6.131972 AGTTGGCATGCATAATACTCCTAT 57.868 37.500 21.36 0.00 0.00 2.57
767 768 6.546484 AGTTGGCATGCATAATACTCCTATT 58.454 36.000 21.36 0.00 0.00 1.73
768 769 7.689299 AGTTGGCATGCATAATACTCCTATTA 58.311 34.615 21.36 0.00 30.83 0.98
769 770 7.607991 AGTTGGCATGCATAATACTCCTATTAC 59.392 37.037 21.36 0.00 29.31 1.89
770 771 6.106003 TGGCATGCATAATACTCCTATTACG 58.894 40.000 21.36 0.00 29.31 3.18
771 772 5.523916 GGCATGCATAATACTCCTATTACGG 59.476 44.000 21.36 0.00 29.31 4.02
772 773 5.523916 GCATGCATAATACTCCTATTACGGG 59.476 44.000 14.21 0.00 29.31 5.28
773 774 6.640518 CATGCATAATACTCCTATTACGGGT 58.359 40.000 0.00 0.00 29.31 5.28
774 775 7.632028 GCATGCATAATACTCCTATTACGGGTA 60.632 40.741 14.21 0.00 29.31 3.69
775 776 7.400599 TGCATAATACTCCTATTACGGGTAG 57.599 40.000 0.00 0.00 29.31 3.18
776 777 6.127535 TGCATAATACTCCTATTACGGGTAGC 60.128 42.308 0.00 0.00 29.31 3.58
924 925 1.156736 CGTACCAGGCCTTGACTTTG 58.843 55.000 11.55 0.00 0.00 2.77
925 926 1.270625 CGTACCAGGCCTTGACTTTGA 60.271 52.381 11.55 0.00 0.00 2.69
926 927 2.152016 GTACCAGGCCTTGACTTTGAC 58.848 52.381 11.55 0.00 0.00 3.18
927 928 0.550914 ACCAGGCCTTGACTTTGACA 59.449 50.000 11.55 0.00 0.00 3.58
928 929 1.145738 ACCAGGCCTTGACTTTGACAT 59.854 47.619 11.55 0.00 0.00 3.06
929 930 2.375174 ACCAGGCCTTGACTTTGACATA 59.625 45.455 11.55 0.00 0.00 2.29
1005 1006 2.717044 GCATGCAGCAGCCATGGAA 61.717 57.895 18.40 0.00 44.79 3.53
1057 1064 2.045242 TCGTGTCCCTCCTCCTCG 60.045 66.667 0.00 0.00 0.00 4.63
1058 1065 2.361357 CGTGTCCCTCCTCCTCGT 60.361 66.667 0.00 0.00 0.00 4.18
1059 1066 2.408241 CGTGTCCCTCCTCCTCGTC 61.408 68.421 0.00 0.00 0.00 4.20
1598 1624 9.522804 TGATGACAAGTATTTTTGGTTTACAAC 57.477 29.630 0.00 0.00 39.19 3.32
1599 1625 9.744468 GATGACAAGTATTTTTGGTTTACAACT 57.256 29.630 0.00 0.00 39.19 3.16
1725 1751 1.449246 GTCGCTGCTCCTGCTCAAT 60.449 57.895 0.00 0.00 40.48 2.57
1767 1793 1.449601 CGCCTTGAACCGCTACCAT 60.450 57.895 0.00 0.00 0.00 3.55
1919 1956 2.182842 GTAGGGCAGCAGCATTCCG 61.183 63.158 2.65 0.00 44.61 4.30
1948 1985 3.451141 TGCACAAGTTTCCATTTGGAC 57.549 42.857 0.00 0.00 45.39 4.02
2042 2085 3.670203 GCGTATGCACACTGAATAACAC 58.330 45.455 0.89 0.00 42.15 3.32
2139 2182 5.597182 ACCTGCAAAGCTCATATGATCAAAT 59.403 36.000 5.72 0.00 0.00 2.32
2169 2214 4.170053 TCATCTAGATACCACCCTGGAAGA 59.830 45.833 4.54 0.00 40.96 2.87
2170 2215 4.186077 TCTAGATACCACCCTGGAAGAG 57.814 50.000 0.00 0.00 40.96 2.85
2186 2231 4.041567 TGGAAGAGTGGTTAGCAATCTCAA 59.958 41.667 14.57 1.53 0.00 3.02
2329 2374 1.525995 CGTTGACCCCACAGCTTGT 60.526 57.895 0.00 0.00 0.00 3.16
2501 2560 2.851798 CAGAGCCTGGAGTTTCAGC 58.148 57.895 0.00 0.00 33.64 4.26
2502 2561 0.324285 CAGAGCCTGGAGTTTCAGCT 59.676 55.000 0.00 0.00 33.64 4.24
2503 2562 1.063183 AGAGCCTGGAGTTTCAGCTT 58.937 50.000 0.00 0.00 33.64 3.74
2504 2563 1.423161 AGAGCCTGGAGTTTCAGCTTT 59.577 47.619 0.00 0.00 33.64 3.51
2505 2564 1.809547 GAGCCTGGAGTTTCAGCTTTC 59.190 52.381 0.00 0.00 33.64 2.62
2545 2604 1.071542 TCTGCCGATTTTCTCACACCA 59.928 47.619 0.00 0.00 0.00 4.17
2553 2612 3.485463 TTTTCTCACACCAGATTCCGT 57.515 42.857 0.00 0.00 0.00 4.69
2582 2644 3.831911 CCAACAACAGGTACCCATTTGAT 59.168 43.478 19.58 8.97 0.00 2.57
2588 2650 5.112129 ACAGGTACCCATTTGATTCCTAC 57.888 43.478 8.74 0.00 0.00 3.18
2615 2677 1.141881 CTGGCAGTCTTACGGCGAT 59.858 57.895 16.62 0.00 40.24 4.58
2616 2678 0.384309 CTGGCAGTCTTACGGCGATA 59.616 55.000 16.62 0.00 40.24 2.92
2649 2711 1.009903 CAACATAACGACGACGGCCA 61.010 55.000 12.58 0.00 44.46 5.36
3133 3195 5.774690 TCCTAGTTTGGACTGAAATTTGCAT 59.225 36.000 0.00 0.00 36.60 3.96
3193 3258 1.771255 AGCAGAACCTCAGAAACACCT 59.229 47.619 0.00 0.00 0.00 4.00
3194 3259 2.173569 AGCAGAACCTCAGAAACACCTT 59.826 45.455 0.00 0.00 0.00 3.50
3195 3260 2.550180 GCAGAACCTCAGAAACACCTTC 59.450 50.000 0.00 0.00 0.00 3.46
3939 4016 7.470009 GCGTCAAAATGGATCCCTTGTATTAAT 60.470 37.037 9.90 0.00 0.00 1.40
4258 4371 5.234466 AGATCACCCATATAAAGTCAGGC 57.766 43.478 0.00 0.00 0.00 4.85
4265 4378 6.322201 CACCCATATAAAGTCAGGCTTGATTT 59.678 38.462 0.30 0.36 37.52 2.17
5196 5367 9.817809 ACACACCTGAAGTTGTAATATAGTATG 57.182 33.333 0.00 0.00 0.00 2.39
5694 5867 2.498726 CAGAAGCTCTCCGAGGGC 59.501 66.667 12.76 12.76 0.00 5.19
5748 5921 1.743958 AGGGAGTACGATGTCAACTCG 59.256 52.381 0.00 0.00 40.44 4.18
6211 6384 5.582665 GTGTGAGAACTGAATGGAAGGTATC 59.417 44.000 0.00 0.00 0.00 2.24
6317 6490 2.802719 TCAGGTTGCCATACTTTTCCC 58.197 47.619 0.00 0.00 0.00 3.97
6322 6495 5.245075 CAGGTTGCCATACTTTTCCCTTTTA 59.755 40.000 0.00 0.00 0.00 1.52
6324 6497 6.500400 AGGTTGCCATACTTTTCCCTTTTATT 59.500 34.615 0.00 0.00 0.00 1.40
6499 6677 3.617284 CGGTTCATAAGGGCCTTTAGTT 58.383 45.455 26.29 1.03 0.00 2.24
6591 6789 1.675219 GGACTAAAGGCCGTCCACA 59.325 57.895 19.41 0.00 46.98 4.17
6636 6834 4.295199 GGGCCTTTGGTCCCGGTT 62.295 66.667 0.84 0.00 42.67 4.44
6637 6835 2.989253 GGCCTTTGGTCCCGGTTG 60.989 66.667 0.00 0.00 0.00 3.77
6638 6836 2.989253 GCCTTTGGTCCCGGTTGG 60.989 66.667 0.00 0.00 0.00 3.77
6639 6837 2.518933 CCTTTGGTCCCGGTTGGT 59.481 61.111 0.00 0.00 34.77 3.67
6640 6838 1.901464 CCTTTGGTCCCGGTTGGTG 60.901 63.158 0.00 0.00 34.77 4.17
6641 6839 2.519780 TTTGGTCCCGGTTGGTGC 60.520 61.111 0.00 0.00 34.77 5.01
6642 6840 4.589675 TTGGTCCCGGTTGGTGCC 62.590 66.667 0.00 0.00 34.77 5.01
6649 6847 4.341502 CGGTTGGTGCCGCCTTTG 62.342 66.667 0.00 0.00 45.47 2.77
6650 6848 3.989787 GGTTGGTGCCGCCTTTGG 61.990 66.667 0.00 0.00 38.35 3.28
6651 6849 3.223589 GTTGGTGCCGCCTTTGGT 61.224 61.111 0.00 0.00 38.35 3.67
6652 6850 2.909965 TTGGTGCCGCCTTTGGTC 60.910 61.111 0.00 0.00 38.35 4.02
6653 6851 4.966787 TGGTGCCGCCTTTGGTCC 62.967 66.667 0.00 0.00 38.35 4.46
6879 7156 3.054582 ACGTATGGAGAGGAGTAGACACA 60.055 47.826 0.00 0.00 0.00 3.72
6923 7200 4.690748 GGAAACAGAAGATCGTCATGAACA 59.309 41.667 11.35 0.00 0.00 3.18
6924 7201 5.352569 GGAAACAGAAGATCGTCATGAACAT 59.647 40.000 11.35 0.00 0.00 2.71
6925 7202 6.535150 GGAAACAGAAGATCGTCATGAACATA 59.465 38.462 11.35 0.00 0.00 2.29
6926 7203 7.225538 GGAAACAGAAGATCGTCATGAACATAT 59.774 37.037 11.35 0.00 0.00 1.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 8.956426 GTGATGATTCTTAAGGTTTTATCACCA 58.044 33.333 19.01 10.12 39.62 4.17
5 6 8.122952 CGTGATGATTCTTAAGGTTTTATCACC 58.877 37.037 21.29 10.08 38.91 4.02
6 7 8.665685 ACGTGATGATTCTTAAGGTTTTATCAC 58.334 33.333 19.39 19.39 38.80 3.06
12 13 9.449719 AGATTAACGTGATGATTCTTAAGGTTT 57.550 29.630 1.85 0.00 0.00 3.27
14 15 9.751542 CTAGATTAACGTGATGATTCTTAAGGT 57.248 33.333 1.85 0.00 0.00 3.50
15 16 9.751542 ACTAGATTAACGTGATGATTCTTAAGG 57.248 33.333 1.85 0.00 0.00 2.69
17 18 9.031360 GCACTAGATTAACGTGATGATTCTTAA 57.969 33.333 0.00 0.00 0.00 1.85
18 19 7.652105 GGCACTAGATTAACGTGATGATTCTTA 59.348 37.037 0.00 0.00 0.00 2.10
19 20 6.480320 GGCACTAGATTAACGTGATGATTCTT 59.520 38.462 0.00 0.00 0.00 2.52
20 21 5.986135 GGCACTAGATTAACGTGATGATTCT 59.014 40.000 0.00 0.00 0.00 2.40
21 22 5.986135 AGGCACTAGATTAACGTGATGATTC 59.014 40.000 0.00 0.00 36.02 2.52
22 23 5.918608 AGGCACTAGATTAACGTGATGATT 58.081 37.500 0.00 0.00 36.02 2.57
23 24 5.069119 TGAGGCACTAGATTAACGTGATGAT 59.931 40.000 0.00 0.00 41.55 2.45
24 25 4.401202 TGAGGCACTAGATTAACGTGATGA 59.599 41.667 0.00 0.00 41.55 2.92
25 26 4.682787 TGAGGCACTAGATTAACGTGATG 58.317 43.478 0.00 0.00 41.55 3.07
26 27 4.737946 GCTGAGGCACTAGATTAACGTGAT 60.738 45.833 0.00 0.00 41.55 3.06
27 28 3.428999 GCTGAGGCACTAGATTAACGTGA 60.429 47.826 0.00 0.00 41.55 4.35
28 29 2.860735 GCTGAGGCACTAGATTAACGTG 59.139 50.000 0.00 0.00 41.55 4.49
29 30 2.159085 GGCTGAGGCACTAGATTAACGT 60.159 50.000 0.00 0.00 41.55 3.99
30 31 2.474816 GGCTGAGGCACTAGATTAACG 58.525 52.381 0.00 0.00 41.55 3.18
31 32 2.485657 GGGGCTGAGGCACTAGATTAAC 60.486 54.545 8.68 0.00 41.55 2.01
32 33 1.768870 GGGGCTGAGGCACTAGATTAA 59.231 52.381 8.68 0.00 41.55 1.40
33 34 1.424638 GGGGCTGAGGCACTAGATTA 58.575 55.000 8.68 0.00 41.55 1.75
34 35 1.348775 GGGGGCTGAGGCACTAGATT 61.349 60.000 8.57 0.00 41.55 2.40
35 36 1.768077 GGGGGCTGAGGCACTAGAT 60.768 63.158 8.57 0.00 41.55 1.98
36 37 2.365635 GGGGGCTGAGGCACTAGA 60.366 66.667 8.57 0.00 41.55 2.43
67 68 2.656947 TGGCTGAGGCACTAGTTTTT 57.343 45.000 3.93 0.00 41.55 1.94
68 69 2.307098 AGATGGCTGAGGCACTAGTTTT 59.693 45.455 12.06 0.00 41.55 2.43
69 70 1.912043 AGATGGCTGAGGCACTAGTTT 59.088 47.619 12.06 0.00 41.55 2.66
70 71 1.577736 AGATGGCTGAGGCACTAGTT 58.422 50.000 12.06 0.00 41.55 2.24
71 72 2.461300 TAGATGGCTGAGGCACTAGT 57.539 50.000 12.06 0.00 41.55 2.57
72 73 3.827008 TTTAGATGGCTGAGGCACTAG 57.173 47.619 12.06 0.00 41.55 2.57
73 74 4.778213 ATTTTAGATGGCTGAGGCACTA 57.222 40.909 12.06 12.00 41.55 2.74
75 76 5.450550 GGTTTATTTTAGATGGCTGAGGCAC 60.451 44.000 12.06 5.66 41.84 5.01
76 77 4.644685 GGTTTATTTTAGATGGCTGAGGCA 59.355 41.667 12.23 12.23 43.52 4.75
77 78 4.889995 AGGTTTATTTTAGATGGCTGAGGC 59.110 41.667 0.00 0.00 37.82 4.70
78 79 5.300286 CCAGGTTTATTTTAGATGGCTGAGG 59.700 44.000 0.00 0.00 0.00 3.86
79 80 5.888161 ACCAGGTTTATTTTAGATGGCTGAG 59.112 40.000 0.00 0.00 0.00 3.35
80 81 5.652014 CACCAGGTTTATTTTAGATGGCTGA 59.348 40.000 0.00 0.00 0.00 4.26
81 82 5.679638 GCACCAGGTTTATTTTAGATGGCTG 60.680 44.000 0.00 0.00 0.00 4.85
82 83 4.402474 GCACCAGGTTTATTTTAGATGGCT 59.598 41.667 0.00 0.00 0.00 4.75
83 84 4.441495 GGCACCAGGTTTATTTTAGATGGC 60.441 45.833 0.00 0.00 0.00 4.40
84 85 4.956075 AGGCACCAGGTTTATTTTAGATGG 59.044 41.667 0.00 0.00 0.00 3.51
85 86 5.652014 TGAGGCACCAGGTTTATTTTAGATG 59.348 40.000 0.00 0.00 0.00 2.90
86 87 5.826643 TGAGGCACCAGGTTTATTTTAGAT 58.173 37.500 0.00 0.00 0.00 1.98
87 88 5.249780 TGAGGCACCAGGTTTATTTTAGA 57.750 39.130 0.00 0.00 0.00 2.10
88 89 4.142381 GCTGAGGCACCAGGTTTATTTTAG 60.142 45.833 8.61 0.00 38.54 1.85
89 90 3.761752 GCTGAGGCACCAGGTTTATTTTA 59.238 43.478 8.61 0.00 38.54 1.52
90 91 2.562738 GCTGAGGCACCAGGTTTATTTT 59.437 45.455 8.61 0.00 38.54 1.82
91 92 2.171003 GCTGAGGCACCAGGTTTATTT 58.829 47.619 8.61 0.00 38.54 1.40
92 93 1.355720 AGCTGAGGCACCAGGTTTATT 59.644 47.619 5.91 0.00 41.58 1.40
93 94 0.995024 AGCTGAGGCACCAGGTTTAT 59.005 50.000 5.91 0.00 41.58 1.40
94 95 2.463441 AGCTGAGGCACCAGGTTTA 58.537 52.632 5.91 0.00 41.58 2.01
95 96 3.255032 AGCTGAGGCACCAGGTTT 58.745 55.556 5.91 0.00 41.58 3.27
96 97 3.255032 AAGCTGAGGCACCAGGTT 58.745 55.556 15.38 15.38 46.36 3.50
97 98 0.545309 TCTAAGCTGAGGCACCAGGT 60.545 55.000 0.00 5.91 45.68 4.00
98 99 0.107945 GTCTAAGCTGAGGCACCAGG 60.108 60.000 0.00 0.00 41.70 4.45
99 100 0.107945 GGTCTAAGCTGAGGCACCAG 60.108 60.000 4.72 3.00 41.70 4.00
100 101 1.888436 CGGTCTAAGCTGAGGCACCA 61.888 60.000 4.72 0.00 41.70 4.17
101 102 1.153549 CGGTCTAAGCTGAGGCACC 60.154 63.158 4.72 1.78 41.70 5.01
102 103 0.179124 CTCGGTCTAAGCTGAGGCAC 60.179 60.000 4.72 0.00 41.70 5.01
103 104 0.612174 ACTCGGTCTAAGCTGAGGCA 60.612 55.000 4.72 0.00 44.08 4.75
104 105 0.101579 GACTCGGTCTAAGCTGAGGC 59.898 60.000 0.00 0.00 44.08 4.70
105 106 0.741915 GGACTCGGTCTAAGCTGAGG 59.258 60.000 0.00 0.00 44.08 3.86
106 107 1.133407 GTGGACTCGGTCTAAGCTGAG 59.867 57.143 0.00 0.00 45.01 3.35
107 108 1.174783 GTGGACTCGGTCTAAGCTGA 58.825 55.000 0.00 0.00 32.47 4.26
108 109 0.179161 CGTGGACTCGGTCTAAGCTG 60.179 60.000 0.00 0.00 32.47 4.24
109 110 0.608582 ACGTGGACTCGGTCTAAGCT 60.609 55.000 0.00 0.00 32.47 3.74
110 111 0.243095 AACGTGGACTCGGTCTAAGC 59.757 55.000 0.00 0.00 32.47 3.09
111 112 1.135460 GGAACGTGGACTCGGTCTAAG 60.135 57.143 10.98 3.66 45.38 2.18
112 113 0.883833 GGAACGTGGACTCGGTCTAA 59.116 55.000 10.98 0.00 45.38 2.10
113 114 0.250858 TGGAACGTGGACTCGGTCTA 60.251 55.000 10.98 3.09 45.38 2.59
114 115 0.898789 ATGGAACGTGGACTCGGTCT 60.899 55.000 10.98 0.00 45.38 3.85
115 116 0.037605 AATGGAACGTGGACTCGGTC 60.038 55.000 3.46 3.46 45.34 4.79
116 117 0.395312 AAATGGAACGTGGACTCGGT 59.605 50.000 0.00 0.00 34.94 4.69
117 118 2.373540 TAAATGGAACGTGGACTCGG 57.626 50.000 0.00 0.00 34.94 4.63
118 119 5.751509 TGAATATAAATGGAACGTGGACTCG 59.248 40.000 0.00 0.00 0.00 4.18
119 120 6.984474 TCTGAATATAAATGGAACGTGGACTC 59.016 38.462 0.00 0.00 0.00 3.36
120 121 6.884832 TCTGAATATAAATGGAACGTGGACT 58.115 36.000 0.00 0.00 0.00 3.85
121 122 6.761714 ACTCTGAATATAAATGGAACGTGGAC 59.238 38.462 0.00 0.00 0.00 4.02
122 123 6.884832 ACTCTGAATATAAATGGAACGTGGA 58.115 36.000 0.00 0.00 0.00 4.02
123 124 7.553881 AACTCTGAATATAAATGGAACGTGG 57.446 36.000 0.00 0.00 0.00 4.94
124 125 8.664798 TGAAACTCTGAATATAAATGGAACGTG 58.335 33.333 0.00 0.00 0.00 4.49
125 126 8.786826 TGAAACTCTGAATATAAATGGAACGT 57.213 30.769 0.00 0.00 0.00 3.99
126 127 9.098355 TCTGAAACTCTGAATATAAATGGAACG 57.902 33.333 0.00 0.00 0.00 3.95
132 133 9.319143 CCGAAGTCTGAAACTCTGAATATAAAT 57.681 33.333 0.00 0.00 37.17 1.40
133 134 8.528643 TCCGAAGTCTGAAACTCTGAATATAAA 58.471 33.333 0.00 0.00 37.17 1.40
134 135 8.063200 TCCGAAGTCTGAAACTCTGAATATAA 57.937 34.615 0.00 0.00 37.17 0.98
135 136 7.640597 TCCGAAGTCTGAAACTCTGAATATA 57.359 36.000 0.00 0.00 37.17 0.86
136 137 6.531503 TCCGAAGTCTGAAACTCTGAATAT 57.468 37.500 0.00 0.00 37.17 1.28
137 138 5.977489 TCCGAAGTCTGAAACTCTGAATA 57.023 39.130 0.00 0.00 37.17 1.75
138 139 4.873746 TCCGAAGTCTGAAACTCTGAAT 57.126 40.909 0.00 0.00 37.17 2.57
139 140 4.501571 CCTTCCGAAGTCTGAAACTCTGAA 60.502 45.833 7.37 0.00 37.17 3.02
140 141 3.005897 CCTTCCGAAGTCTGAAACTCTGA 59.994 47.826 7.37 0.00 37.17 3.27
141 142 3.321497 CCTTCCGAAGTCTGAAACTCTG 58.679 50.000 7.37 0.00 37.17 3.35
142 143 2.289133 GCCTTCCGAAGTCTGAAACTCT 60.289 50.000 7.37 0.00 37.17 3.24
143 144 2.070028 GCCTTCCGAAGTCTGAAACTC 58.930 52.381 7.37 0.00 37.17 3.01
144 145 1.694696 AGCCTTCCGAAGTCTGAAACT 59.305 47.619 7.37 0.00 41.10 2.66
145 146 1.801178 CAGCCTTCCGAAGTCTGAAAC 59.199 52.381 12.89 0.00 0.00 2.78
146 147 1.270839 CCAGCCTTCCGAAGTCTGAAA 60.271 52.381 18.61 0.00 0.00 2.69
147 148 0.321671 CCAGCCTTCCGAAGTCTGAA 59.678 55.000 18.61 0.00 0.00 3.02
148 149 0.541998 TCCAGCCTTCCGAAGTCTGA 60.542 55.000 18.61 4.48 0.00 3.27
149 150 0.108424 CTCCAGCCTTCCGAAGTCTG 60.108 60.000 11.49 11.49 0.00 3.51
150 151 0.543174 ACTCCAGCCTTCCGAAGTCT 60.543 55.000 7.37 0.00 0.00 3.24
151 152 1.135333 CTACTCCAGCCTTCCGAAGTC 59.865 57.143 7.37 0.00 0.00 3.01
152 153 1.187087 CTACTCCAGCCTTCCGAAGT 58.813 55.000 7.37 0.00 0.00 3.01
153 154 1.134965 CACTACTCCAGCCTTCCGAAG 60.135 57.143 0.68 0.68 0.00 3.79
154 155 0.895530 CACTACTCCAGCCTTCCGAA 59.104 55.000 0.00 0.00 0.00 4.30
155 156 0.251653 ACACTACTCCAGCCTTCCGA 60.252 55.000 0.00 0.00 0.00 4.55
156 157 1.134560 GTACACTACTCCAGCCTTCCG 59.865 57.143 0.00 0.00 0.00 4.30
157 158 2.458620 AGTACACTACTCCAGCCTTCC 58.541 52.381 0.00 0.00 32.47 3.46
158 159 3.258622 ACAAGTACACTACTCCAGCCTTC 59.741 47.826 0.00 0.00 38.26 3.46
159 160 3.240302 ACAAGTACACTACTCCAGCCTT 58.760 45.455 0.00 0.00 38.26 4.35
160 161 2.890814 ACAAGTACACTACTCCAGCCT 58.109 47.619 0.00 0.00 38.26 4.58
161 162 3.679824 AACAAGTACACTACTCCAGCC 57.320 47.619 0.00 0.00 38.26 4.85
162 163 4.884247 AGAAACAAGTACACTACTCCAGC 58.116 43.478 0.00 0.00 38.26 4.85
163 164 5.154932 CGAGAAACAAGTACACTACTCCAG 58.845 45.833 0.00 0.00 38.26 3.86
164 165 4.581824 ACGAGAAACAAGTACACTACTCCA 59.418 41.667 0.00 0.00 38.26 3.86
165 166 5.118642 ACGAGAAACAAGTACACTACTCC 57.881 43.478 0.00 0.00 38.26 3.85
166 167 6.662616 TGTACGAGAAACAAGTACACTACTC 58.337 40.000 3.87 0.00 43.71 2.59
167 168 6.624352 TGTACGAGAAACAAGTACACTACT 57.376 37.500 3.87 0.00 43.71 2.57
173 174 5.740569 TGCGATATGTACGAGAAACAAGTAC 59.259 40.000 0.00 0.00 40.61 2.73
174 175 5.740569 GTGCGATATGTACGAGAAACAAGTA 59.259 40.000 0.00 0.00 0.00 2.24
175 176 4.561606 GTGCGATATGTACGAGAAACAAGT 59.438 41.667 0.00 0.00 0.00 3.16
176 177 4.561213 TGTGCGATATGTACGAGAAACAAG 59.439 41.667 0.00 0.00 35.72 3.16
177 178 4.325204 GTGTGCGATATGTACGAGAAACAA 59.675 41.667 0.00 0.00 35.72 2.83
178 179 3.855379 GTGTGCGATATGTACGAGAAACA 59.145 43.478 0.00 0.00 35.72 2.83
179 180 3.855379 TGTGTGCGATATGTACGAGAAAC 59.145 43.478 0.00 0.00 35.72 2.78
180 181 4.099380 TGTGTGCGATATGTACGAGAAA 57.901 40.909 0.00 0.00 35.72 2.52
181 182 3.128068 ACTGTGTGCGATATGTACGAGAA 59.872 43.478 0.00 0.00 35.72 2.87
182 183 2.681344 ACTGTGTGCGATATGTACGAGA 59.319 45.455 0.00 0.00 35.72 4.04
183 184 3.066369 ACTGTGTGCGATATGTACGAG 57.934 47.619 0.00 0.00 35.72 4.18
184 185 3.175929 CAACTGTGTGCGATATGTACGA 58.824 45.455 0.00 0.00 35.72 3.43
185 186 2.285026 GCAACTGTGTGCGATATGTACG 60.285 50.000 0.00 0.00 35.72 3.67
186 187 2.030457 GGCAACTGTGTGCGATATGTAC 59.970 50.000 8.22 0.00 45.91 2.90
187 188 2.276201 GGCAACTGTGTGCGATATGTA 58.724 47.619 8.22 0.00 45.91 2.29
188 189 1.086696 GGCAACTGTGTGCGATATGT 58.913 50.000 8.22 0.00 45.91 2.29
189 190 3.903876 GGCAACTGTGTGCGATATG 57.096 52.632 8.22 0.00 45.91 1.78
202 203 7.042791 CGACTACTACTCTACTAACTAGGCAAC 60.043 44.444 0.00 0.00 0.00 4.17
203 204 6.983307 CGACTACTACTCTACTAACTAGGCAA 59.017 42.308 0.00 0.00 0.00 4.52
204 205 6.462207 CCGACTACTACTCTACTAACTAGGCA 60.462 46.154 0.00 0.00 0.00 4.75
205 206 5.925969 CCGACTACTACTCTACTAACTAGGC 59.074 48.000 0.00 0.00 0.00 3.93
206 207 7.049799 ACCGACTACTACTCTACTAACTAGG 57.950 44.000 0.00 0.00 0.00 3.02
209 210 7.865385 CGATTACCGACTACTACTCTACTAACT 59.135 40.741 0.00 0.00 41.76 2.24
210 211 7.115663 CCGATTACCGACTACTACTCTACTAAC 59.884 44.444 0.00 0.00 41.76 2.34
211 212 7.148641 CCGATTACCGACTACTACTCTACTAA 58.851 42.308 0.00 0.00 41.76 2.24
212 213 6.265649 ACCGATTACCGACTACTACTCTACTA 59.734 42.308 0.00 0.00 41.76 1.82
213 214 5.069781 ACCGATTACCGACTACTACTCTACT 59.930 44.000 0.00 0.00 41.76 2.57
214 215 5.293560 ACCGATTACCGACTACTACTCTAC 58.706 45.833 0.00 0.00 41.76 2.59
215 216 5.537300 ACCGATTACCGACTACTACTCTA 57.463 43.478 0.00 0.00 41.76 2.43
216 217 4.414337 ACCGATTACCGACTACTACTCT 57.586 45.455 0.00 0.00 41.76 3.24
217 218 5.293560 AGTACCGATTACCGACTACTACTC 58.706 45.833 0.00 0.00 41.76 2.59
218 219 5.069781 AGAGTACCGATTACCGACTACTACT 59.930 44.000 0.00 0.00 41.76 2.57
219 220 5.293560 AGAGTACCGATTACCGACTACTAC 58.706 45.833 0.00 0.00 41.76 2.73
220 221 5.069119 TGAGAGTACCGATTACCGACTACTA 59.931 44.000 0.00 0.00 41.76 1.82
221 222 4.141846 TGAGAGTACCGATTACCGACTACT 60.142 45.833 0.00 0.00 41.76 2.57
222 223 4.122776 TGAGAGTACCGATTACCGACTAC 58.877 47.826 0.00 0.00 41.76 2.73
223 224 4.406648 TGAGAGTACCGATTACCGACTA 57.593 45.455 0.00 0.00 41.76 2.59
224 225 3.272574 TGAGAGTACCGATTACCGACT 57.727 47.619 0.00 0.00 41.76 4.18
225 226 3.314635 ACATGAGAGTACCGATTACCGAC 59.685 47.826 0.00 0.00 41.76 4.79
226 227 3.314357 CACATGAGAGTACCGATTACCGA 59.686 47.826 0.00 0.00 41.76 4.69
227 228 3.314357 TCACATGAGAGTACCGATTACCG 59.686 47.826 0.00 0.00 38.18 4.02
228 229 4.913335 TCACATGAGAGTACCGATTACC 57.087 45.455 0.00 0.00 0.00 2.85
229 230 5.892568 AGTTCACATGAGAGTACCGATTAC 58.107 41.667 0.00 0.00 0.00 1.89
230 231 7.634671 TTAGTTCACATGAGAGTACCGATTA 57.365 36.000 0.00 0.00 0.00 1.75
231 232 6.525578 TTAGTTCACATGAGAGTACCGATT 57.474 37.500 0.00 0.00 0.00 3.34
232 233 6.096987 ACATTAGTTCACATGAGAGTACCGAT 59.903 38.462 0.00 0.00 0.00 4.18
233 234 5.417894 ACATTAGTTCACATGAGAGTACCGA 59.582 40.000 0.00 0.00 0.00 4.69
234 235 5.651530 ACATTAGTTCACATGAGAGTACCG 58.348 41.667 0.00 0.00 0.00 4.02
235 236 7.653713 CCATACATTAGTTCACATGAGAGTACC 59.346 40.741 0.00 0.00 0.00 3.34
236 237 8.198109 ACCATACATTAGTTCACATGAGAGTAC 58.802 37.037 0.00 0.00 0.00 2.73
237 238 8.306313 ACCATACATTAGTTCACATGAGAGTA 57.694 34.615 0.00 0.00 0.00 2.59
238 239 7.187824 ACCATACATTAGTTCACATGAGAGT 57.812 36.000 0.00 0.00 0.00 3.24
239 240 7.011763 CCAACCATACATTAGTTCACATGAGAG 59.988 40.741 0.00 0.00 0.00 3.20
240 241 6.823182 CCAACCATACATTAGTTCACATGAGA 59.177 38.462 0.00 0.00 0.00 3.27
241 242 6.599244 ACCAACCATACATTAGTTCACATGAG 59.401 38.462 0.00 0.00 0.00 2.90
242 243 6.480763 ACCAACCATACATTAGTTCACATGA 58.519 36.000 0.00 0.00 0.00 3.07
243 244 6.757897 ACCAACCATACATTAGTTCACATG 57.242 37.500 0.00 0.00 0.00 3.21
244 245 6.152661 CCAACCAACCATACATTAGTTCACAT 59.847 38.462 0.00 0.00 0.00 3.21
245 246 5.475220 CCAACCAACCATACATTAGTTCACA 59.525 40.000 0.00 0.00 0.00 3.58
246 247 5.475564 ACCAACCAACCATACATTAGTTCAC 59.524 40.000 0.00 0.00 0.00 3.18
247 248 5.636123 ACCAACCAACCATACATTAGTTCA 58.364 37.500 0.00 0.00 0.00 3.18
248 249 6.584185 AACCAACCAACCATACATTAGTTC 57.416 37.500 0.00 0.00 0.00 3.01
249 250 7.463431 TCTAACCAACCAACCATACATTAGTT 58.537 34.615 0.00 0.00 0.00 2.24
250 251 7.023171 TCTAACCAACCAACCATACATTAGT 57.977 36.000 0.00 0.00 0.00 2.24
251 252 7.067008 CCTTCTAACCAACCAACCATACATTAG 59.933 40.741 0.00 0.00 0.00 1.73
252 253 6.887545 CCTTCTAACCAACCAACCATACATTA 59.112 38.462 0.00 0.00 0.00 1.90
253 254 5.714806 CCTTCTAACCAACCAACCATACATT 59.285 40.000 0.00 0.00 0.00 2.71
254 255 5.261216 CCTTCTAACCAACCAACCATACAT 58.739 41.667 0.00 0.00 0.00 2.29
255 256 4.507691 CCCTTCTAACCAACCAACCATACA 60.508 45.833 0.00 0.00 0.00 2.29
256 257 4.014406 CCCTTCTAACCAACCAACCATAC 58.986 47.826 0.00 0.00 0.00 2.39
257 258 3.562609 GCCCTTCTAACCAACCAACCATA 60.563 47.826 0.00 0.00 0.00 2.74
258 259 2.821625 GCCCTTCTAACCAACCAACCAT 60.822 50.000 0.00 0.00 0.00 3.55
259 260 1.479757 GCCCTTCTAACCAACCAACCA 60.480 52.381 0.00 0.00 0.00 3.67
260 261 1.254026 GCCCTTCTAACCAACCAACC 58.746 55.000 0.00 0.00 0.00 3.77
261 262 1.989706 TGCCCTTCTAACCAACCAAC 58.010 50.000 0.00 0.00 0.00 3.77
262 263 2.757894 TTGCCCTTCTAACCAACCAA 57.242 45.000 0.00 0.00 0.00 3.67
263 264 2.524306 CATTGCCCTTCTAACCAACCA 58.476 47.619 0.00 0.00 0.00 3.67
264 265 1.824852 CCATTGCCCTTCTAACCAACC 59.175 52.381 0.00 0.00 0.00 3.77
265 266 2.525368 ACCATTGCCCTTCTAACCAAC 58.475 47.619 0.00 0.00 0.00 3.77
266 267 2.990740 ACCATTGCCCTTCTAACCAA 57.009 45.000 0.00 0.00 0.00 3.67
267 268 4.601406 AATACCATTGCCCTTCTAACCA 57.399 40.909 0.00 0.00 0.00 3.67
268 269 6.362248 TCTAAATACCATTGCCCTTCTAACC 58.638 40.000 0.00 0.00 0.00 2.85
269 270 7.556635 AGTTCTAAATACCATTGCCCTTCTAAC 59.443 37.037 0.00 0.00 0.00 2.34
270 271 7.639378 AGTTCTAAATACCATTGCCCTTCTAA 58.361 34.615 0.00 0.00 0.00 2.10
271 272 7.092623 TGAGTTCTAAATACCATTGCCCTTCTA 60.093 37.037 0.00 0.00 0.00 2.10
272 273 6.079712 AGTTCTAAATACCATTGCCCTTCT 57.920 37.500 0.00 0.00 0.00 2.85
273 274 5.885912 TGAGTTCTAAATACCATTGCCCTTC 59.114 40.000 0.00 0.00 0.00 3.46
274 275 5.826643 TGAGTTCTAAATACCATTGCCCTT 58.173 37.500 0.00 0.00 0.00 3.95
275 276 5.450818 TGAGTTCTAAATACCATTGCCCT 57.549 39.130 0.00 0.00 0.00 5.19
276 277 5.049405 CGATGAGTTCTAAATACCATTGCCC 60.049 44.000 0.00 0.00 0.00 5.36
277 278 5.049405 CCGATGAGTTCTAAATACCATTGCC 60.049 44.000 0.00 0.00 0.00 4.52
278 279 5.049405 CCCGATGAGTTCTAAATACCATTGC 60.049 44.000 0.00 0.00 0.00 3.56
279 280 6.288294 TCCCGATGAGTTCTAAATACCATTG 58.712 40.000 0.00 0.00 0.00 2.82
280 281 6.494666 TCCCGATGAGTTCTAAATACCATT 57.505 37.500 0.00 0.00 0.00 3.16
281 282 6.688073 ATCCCGATGAGTTCTAAATACCAT 57.312 37.500 0.00 0.00 0.00 3.55
282 283 6.494666 AATCCCGATGAGTTCTAAATACCA 57.505 37.500 0.00 0.00 0.00 3.25
283 284 8.897872 TTAAATCCCGATGAGTTCTAAATACC 57.102 34.615 0.00 0.00 32.64 2.73
284 285 9.543783 ACTTAAATCCCGATGAGTTCTAAATAC 57.456 33.333 0.00 0.00 32.64 1.89
286 287 9.110502 GAACTTAAATCCCGATGAGTTCTAAAT 57.889 33.333 14.99 0.00 32.64 1.40
287 288 8.319146 AGAACTTAAATCCCGATGAGTTCTAAA 58.681 33.333 19.41 0.00 41.64 1.85
288 289 7.848128 AGAACTTAAATCCCGATGAGTTCTAA 58.152 34.615 19.41 0.00 41.64 2.10
289 290 7.419711 AGAACTTAAATCCCGATGAGTTCTA 57.580 36.000 19.41 0.00 41.64 2.10
290 291 6.301169 AGAACTTAAATCCCGATGAGTTCT 57.699 37.500 17.20 17.20 39.57 3.01
291 292 9.194271 GTATAGAACTTAAATCCCGATGAGTTC 57.806 37.037 14.70 14.70 32.64 3.01
292 293 8.925338 AGTATAGAACTTAAATCCCGATGAGTT 58.075 33.333 0.00 0.00 33.35 3.01
293 294 8.480133 AGTATAGAACTTAAATCCCGATGAGT 57.520 34.615 0.00 0.00 33.35 3.41
307 308 8.873830 CGAACATCAATGTCAAGTATAGAACTT 58.126 33.333 0.00 0.00 44.19 2.66
308 309 8.035394 ACGAACATCAATGTCAAGTATAGAACT 58.965 33.333 0.00 0.00 40.80 3.01
309 310 8.186178 ACGAACATCAATGTCAAGTATAGAAC 57.814 34.615 0.00 0.00 40.80 3.01
314 315 9.817809 AGTAATACGAACATCAATGTCAAGTAT 57.182 29.630 0.00 4.70 40.80 2.12
315 316 9.647797 AAGTAATACGAACATCAATGTCAAGTA 57.352 29.630 0.00 2.75 40.80 2.24
316 317 8.547967 AAGTAATACGAACATCAATGTCAAGT 57.452 30.769 0.00 0.72 40.80 3.16
317 318 8.873830 AGAAGTAATACGAACATCAATGTCAAG 58.126 33.333 0.00 0.00 40.80 3.02
318 319 8.771920 AGAAGTAATACGAACATCAATGTCAA 57.228 30.769 0.00 0.00 40.80 3.18
319 320 8.032451 TGAGAAGTAATACGAACATCAATGTCA 58.968 33.333 0.00 0.00 40.80 3.58
320 321 8.407457 TGAGAAGTAATACGAACATCAATGTC 57.593 34.615 0.00 0.00 40.80 3.06
321 322 8.771920 TTGAGAAGTAATACGAACATCAATGT 57.228 30.769 0.00 0.00 44.20 2.71
370 371 2.261037 TTATGAACGCATGCACTTGC 57.739 45.000 19.57 2.04 42.50 4.01
371 372 5.345472 TCATTTTTATGAACGCATGCACTTG 59.655 36.000 19.57 3.36 35.94 3.16
372 373 5.468592 TCATTTTTATGAACGCATGCACTT 58.531 33.333 19.57 7.98 35.94 3.16
373 374 5.058149 TCATTTTTATGAACGCATGCACT 57.942 34.783 19.57 2.87 35.94 4.40
374 375 5.760193 TTCATTTTTATGAACGCATGCAC 57.240 34.783 19.57 8.95 35.80 4.57
375 376 5.868258 ACATTCATTTTTATGAACGCATGCA 59.132 32.000 19.57 0.00 42.57 3.96
376 377 6.335176 ACATTCATTTTTATGAACGCATGC 57.665 33.333 7.91 7.91 42.57 4.06
377 378 7.999878 GCATACATTCATTTTTATGAACGCATG 59.000 33.333 2.93 3.47 42.57 4.06
378 379 7.922278 AGCATACATTCATTTTTATGAACGCAT 59.078 29.630 2.93 0.00 42.57 4.73
379 380 7.257003 AGCATACATTCATTTTTATGAACGCA 58.743 30.769 2.93 0.00 42.57 5.24
380 381 7.684062 AGCATACATTCATTTTTATGAACGC 57.316 32.000 2.93 2.68 42.57 4.84
381 382 9.075519 ACAAGCATACATTCATTTTTATGAACG 57.924 29.630 2.93 0.00 42.57 3.95
383 384 9.926158 ACACAAGCATACATTCATTTTTATGAA 57.074 25.926 3.33 3.33 43.72 2.57
391 392 8.509690 GCTCATATACACAAGCATACATTCATT 58.490 33.333 0.00 0.00 34.86 2.57
392 393 7.148523 CGCTCATATACACAAGCATACATTCAT 60.149 37.037 0.00 0.00 34.39 2.57
393 394 6.146021 CGCTCATATACACAAGCATACATTCA 59.854 38.462 0.00 0.00 34.39 2.57
394 395 6.366061 TCGCTCATATACACAAGCATACATTC 59.634 38.462 0.00 0.00 34.39 2.67
395 396 6.223120 TCGCTCATATACACAAGCATACATT 58.777 36.000 0.00 0.00 34.39 2.71
396 397 5.783111 TCGCTCATATACACAAGCATACAT 58.217 37.500 0.00 0.00 34.39 2.29
397 398 5.195001 TCGCTCATATACACAAGCATACA 57.805 39.130 0.00 0.00 34.39 2.29
398 399 6.712241 ATTCGCTCATATACACAAGCATAC 57.288 37.500 0.00 0.00 34.39 2.39
399 400 7.728847 AAATTCGCTCATATACACAAGCATA 57.271 32.000 0.00 0.00 34.39 3.14
400 401 6.624352 AAATTCGCTCATATACACAAGCAT 57.376 33.333 0.00 0.00 34.39 3.79
401 402 7.546778 TTAAATTCGCTCATATACACAAGCA 57.453 32.000 0.00 0.00 34.39 3.91
402 403 8.895845 CAATTAAATTCGCTCATATACACAAGC 58.104 33.333 0.00 0.00 0.00 4.01
403 404 9.935682 ACAATTAAATTCGCTCATATACACAAG 57.064 29.630 0.00 0.00 0.00 3.16
440 441 7.454260 AAGAATTAGAAGAGTGCCGATTTTT 57.546 32.000 0.00 0.00 0.00 1.94
441 442 8.561738 TTAAGAATTAGAAGAGTGCCGATTTT 57.438 30.769 0.00 0.00 0.00 1.82
442 443 8.738645 ATTAAGAATTAGAAGAGTGCCGATTT 57.261 30.769 0.00 0.00 0.00 2.17
450 451 8.643324 AGCATACGGATTAAGAATTAGAAGAGT 58.357 33.333 0.00 0.00 0.00 3.24
455 456 7.540474 AGGAGCATACGGATTAAGAATTAGA 57.460 36.000 0.00 0.00 0.00 2.10
463 464 3.128349 GCGAAAGGAGCATACGGATTAA 58.872 45.455 0.00 0.00 34.19 1.40
464 465 2.364324 AGCGAAAGGAGCATACGGATTA 59.636 45.455 0.00 0.00 37.01 1.75
465 466 1.139058 AGCGAAAGGAGCATACGGATT 59.861 47.619 0.00 0.00 37.01 3.01
466 467 0.753262 AGCGAAAGGAGCATACGGAT 59.247 50.000 0.00 0.00 37.01 4.18
467 468 0.535335 AAGCGAAAGGAGCATACGGA 59.465 50.000 0.00 0.00 37.01 4.69
489 490 1.105457 AGCAGCAAACAAGTCAGCAA 58.895 45.000 0.00 0.00 0.00 3.91
527 528 1.609635 TATCGGCAGAGGAAACGCCA 61.610 55.000 0.00 0.00 46.60 5.69
539 540 1.832883 ATGCACTTTGGTTATCGGCA 58.167 45.000 0.00 0.00 0.00 5.69
549 550 9.696917 TCATACACTAGTATCATATGCACTTTG 57.303 33.333 13.08 12.64 38.88 2.77
550 551 9.698309 GTCATACACTAGTATCATATGCACTTT 57.302 33.333 13.08 1.93 38.88 2.66
551 552 8.860088 TGTCATACACTAGTATCATATGCACTT 58.140 33.333 13.08 1.54 38.88 3.16
552 553 8.300286 GTGTCATACACTAGTATCATATGCACT 58.700 37.037 19.49 12.62 45.27 4.40
553 554 8.454293 GTGTCATACACTAGTATCATATGCAC 57.546 38.462 0.00 9.93 45.27 4.57
566 567 7.733630 GCATTACGGATGTAGTGTCATACACTA 60.734 40.741 14.32 14.32 46.00 2.74
567 568 6.955220 GCATTACGGATGTAGTGTCATACACT 60.955 42.308 16.23 16.23 46.83 3.55
568 569 5.175126 GCATTACGGATGTAGTGTCATACAC 59.825 44.000 1.92 1.92 42.29 2.90
569 570 5.163499 TGCATTACGGATGTAGTGTCATACA 60.163 40.000 3.48 0.00 39.68 2.29
570 571 5.286438 TGCATTACGGATGTAGTGTCATAC 58.714 41.667 3.48 0.00 39.68 2.39
571 572 5.523438 TGCATTACGGATGTAGTGTCATA 57.477 39.130 3.48 0.00 39.68 2.15
572 573 4.400529 TGCATTACGGATGTAGTGTCAT 57.599 40.909 3.48 0.00 39.68 3.06
573 574 3.878160 TGCATTACGGATGTAGTGTCA 57.122 42.857 3.48 0.00 39.68 3.58
574 575 8.703604 ATATTATGCATTACGGATGTAGTGTC 57.296 34.615 3.54 0.00 39.68 3.67
575 576 8.311109 TGATATTATGCATTACGGATGTAGTGT 58.689 33.333 3.54 0.00 39.68 3.55
576 577 8.702163 TGATATTATGCATTACGGATGTAGTG 57.298 34.615 3.54 0.00 40.27 2.74
577 578 9.719355 TTTGATATTATGCATTACGGATGTAGT 57.281 29.630 3.54 0.00 38.07 2.73
580 581 9.066892 ACTTTTGATATTATGCATTACGGATGT 57.933 29.630 3.54 0.00 38.07 3.06
581 582 9.897744 AACTTTTGATATTATGCATTACGGATG 57.102 29.630 3.54 0.00 38.85 3.51
582 583 9.897744 CAACTTTTGATATTATGCATTACGGAT 57.102 29.630 3.54 0.00 0.00 4.18
583 584 9.114952 TCAACTTTTGATATTATGCATTACGGA 57.885 29.630 3.54 0.00 34.08 4.69
599 600 7.009179 AGTCCTCTGTGATATCAACTTTTGA 57.991 36.000 7.07 0.00 45.01 2.69
600 601 7.678947 AAGTCCTCTGTGATATCAACTTTTG 57.321 36.000 7.07 0.00 0.00 2.44
601 602 9.965902 ATAAAGTCCTCTGTGATATCAACTTTT 57.034 29.630 24.98 15.41 37.08 2.27
602 603 9.965902 AATAAAGTCCTCTGTGATATCAACTTT 57.034 29.630 23.98 23.98 38.71 2.66
603 604 9.965902 AAATAAAGTCCTCTGTGATATCAACTT 57.034 29.630 7.07 9.46 0.00 2.66
609 610 9.289782 GGCAATAAATAAAGTCCTCTGTGATAT 57.710 33.333 0.00 0.00 0.00 1.63
610 611 8.271458 TGGCAATAAATAAAGTCCTCTGTGATA 58.729 33.333 0.00 0.00 0.00 2.15
611 612 7.118723 TGGCAATAAATAAAGTCCTCTGTGAT 58.881 34.615 0.00 0.00 0.00 3.06
612 613 6.480763 TGGCAATAAATAAAGTCCTCTGTGA 58.519 36.000 0.00 0.00 0.00 3.58
613 614 6.757897 TGGCAATAAATAAAGTCCTCTGTG 57.242 37.500 0.00 0.00 0.00 3.66
614 615 6.183360 GCATGGCAATAAATAAAGTCCTCTGT 60.183 38.462 0.00 0.00 0.00 3.41
615 616 6.183360 TGCATGGCAATAAATAAAGTCCTCTG 60.183 38.462 0.00 0.00 34.76 3.35
616 617 5.893255 TGCATGGCAATAAATAAAGTCCTCT 59.107 36.000 0.00 0.00 34.76 3.69
617 618 6.147864 TGCATGGCAATAAATAAAGTCCTC 57.852 37.500 0.00 0.00 34.76 3.71
618 619 6.324512 TCATGCATGGCAATAAATAAAGTCCT 59.675 34.615 25.97 0.00 43.62 3.85
619 620 6.514947 TCATGCATGGCAATAAATAAAGTCC 58.485 36.000 25.97 0.00 43.62 3.85
620 621 9.132521 GTATCATGCATGGCAATAAATAAAGTC 57.867 33.333 25.97 0.45 43.62 3.01
621 622 8.640651 TGTATCATGCATGGCAATAAATAAAGT 58.359 29.630 25.97 0.00 43.62 2.66
622 623 9.478768 TTGTATCATGCATGGCAATAAATAAAG 57.521 29.630 25.97 0.00 43.62 1.85
623 624 9.828039 TTTGTATCATGCATGGCAATAAATAAA 57.172 25.926 25.97 14.17 43.62 1.40
624 625 9.478768 CTTTGTATCATGCATGGCAATAAATAA 57.521 29.630 25.97 11.32 43.62 1.40
625 626 8.640651 ACTTTGTATCATGCATGGCAATAAATA 58.359 29.630 25.97 11.72 43.62 1.40
626 627 7.502696 ACTTTGTATCATGCATGGCAATAAAT 58.497 30.769 25.97 12.70 43.62 1.40
627 628 6.876155 ACTTTGTATCATGCATGGCAATAAA 58.124 32.000 25.97 18.35 43.62 1.40
628 629 6.468333 ACTTTGTATCATGCATGGCAATAA 57.532 33.333 25.97 12.98 43.62 1.40
629 630 6.294120 GCTACTTTGTATCATGCATGGCAATA 60.294 38.462 25.97 13.80 43.62 1.90
630 631 5.508489 GCTACTTTGTATCATGCATGGCAAT 60.508 40.000 25.97 14.80 43.62 3.56
631 632 4.202040 GCTACTTTGTATCATGCATGGCAA 60.202 41.667 25.97 22.51 43.62 4.52
632 633 3.316029 GCTACTTTGTATCATGCATGGCA 59.684 43.478 25.97 18.54 44.86 4.92
633 634 3.316029 TGCTACTTTGTATCATGCATGGC 59.684 43.478 25.97 16.76 0.00 4.40
634 635 4.336153 TGTGCTACTTTGTATCATGCATGG 59.664 41.667 25.97 10.76 0.00 3.66
635 636 5.488645 TGTGCTACTTTGTATCATGCATG 57.511 39.130 21.07 21.07 0.00 4.06
636 637 5.824097 TGATGTGCTACTTTGTATCATGCAT 59.176 36.000 0.00 0.00 0.00 3.96
637 638 5.184711 TGATGTGCTACTTTGTATCATGCA 58.815 37.500 0.00 0.00 0.00 3.96
638 639 5.739752 TGATGTGCTACTTTGTATCATGC 57.260 39.130 0.00 0.00 0.00 4.06
649 650 9.371136 CCGTATCATATTAAATGATGTGCTACT 57.629 33.333 16.73 0.65 38.98 2.57
650 651 9.151471 ACCGTATCATATTAAATGATGTGCTAC 57.849 33.333 16.73 9.67 38.98 3.58
652 653 9.890629 ATACCGTATCATATTAAATGATGTGCT 57.109 29.630 16.73 5.80 38.98 4.40
678 679 8.891985 AGAGAGGCTTAAGTATCATATCATGA 57.108 34.615 0.00 0.00 44.55 3.07
679 680 9.941325 AAAGAGAGGCTTAAGTATCATATCATG 57.059 33.333 4.02 0.00 35.24 3.07
681 682 9.373450 AGAAAGAGAGGCTTAAGTATCATATCA 57.627 33.333 4.02 0.00 35.24 2.15
684 685 9.201989 TGAAGAAAGAGAGGCTTAAGTATCATA 57.798 33.333 4.02 0.00 35.24 2.15
685 686 8.083828 TGAAGAAAGAGAGGCTTAAGTATCAT 57.916 34.615 4.02 0.00 35.24 2.45
686 687 7.482169 TGAAGAAAGAGAGGCTTAAGTATCA 57.518 36.000 4.02 0.00 35.24 2.15
687 688 8.956533 AATGAAGAAAGAGAGGCTTAAGTATC 57.043 34.615 4.02 2.83 35.24 2.24
690 691 9.746457 ATTAAATGAAGAAAGAGAGGCTTAAGT 57.254 29.630 4.02 0.00 35.24 2.24
720 721 9.520515 AACTAGACAATTTTAATGAGGTGACAT 57.479 29.630 0.00 0.00 0.00 3.06
721 722 8.783093 CAACTAGACAATTTTAATGAGGTGACA 58.217 33.333 0.00 0.00 0.00 3.58
722 723 8.237267 CCAACTAGACAATTTTAATGAGGTGAC 58.763 37.037 0.00 0.00 0.00 3.67
723 724 7.094377 GCCAACTAGACAATTTTAATGAGGTGA 60.094 37.037 0.00 0.00 0.00 4.02
724 725 7.029563 GCCAACTAGACAATTTTAATGAGGTG 58.970 38.462 0.00 0.00 0.00 4.00
725 726 6.719370 TGCCAACTAGACAATTTTAATGAGGT 59.281 34.615 0.00 0.00 0.00 3.85
726 727 7.156876 TGCCAACTAGACAATTTTAATGAGG 57.843 36.000 0.00 0.00 0.00 3.86
727 728 7.221452 GCATGCCAACTAGACAATTTTAATGAG 59.779 37.037 6.36 0.00 0.00 2.90
728 729 7.035004 GCATGCCAACTAGACAATTTTAATGA 58.965 34.615 6.36 0.00 0.00 2.57
729 730 6.812656 TGCATGCCAACTAGACAATTTTAATG 59.187 34.615 16.68 0.00 0.00 1.90
730 731 6.934056 TGCATGCCAACTAGACAATTTTAAT 58.066 32.000 16.68 0.00 0.00 1.40
731 732 6.338214 TGCATGCCAACTAGACAATTTTAA 57.662 33.333 16.68 0.00 0.00 1.52
732 733 5.973899 TGCATGCCAACTAGACAATTTTA 57.026 34.783 16.68 0.00 0.00 1.52
733 734 4.870123 TGCATGCCAACTAGACAATTTT 57.130 36.364 16.68 0.00 0.00 1.82
734 735 6.528537 TTATGCATGCCAACTAGACAATTT 57.471 33.333 16.68 0.00 0.00 1.82
735 736 6.720112 ATTATGCATGCCAACTAGACAATT 57.280 33.333 16.68 0.00 0.00 2.32
736 737 7.000472 AGTATTATGCATGCCAACTAGACAAT 59.000 34.615 16.68 0.00 0.00 2.71
737 738 6.356556 AGTATTATGCATGCCAACTAGACAA 58.643 36.000 16.68 0.00 0.00 3.18
738 739 5.928976 AGTATTATGCATGCCAACTAGACA 58.071 37.500 16.68 0.00 0.00 3.41
739 740 5.409826 GGAGTATTATGCATGCCAACTAGAC 59.590 44.000 16.68 4.77 0.00 2.59
740 741 5.307976 AGGAGTATTATGCATGCCAACTAGA 59.692 40.000 16.68 0.00 0.00 2.43
741 742 5.555017 AGGAGTATTATGCATGCCAACTAG 58.445 41.667 16.68 0.00 0.00 2.57
742 743 5.567037 AGGAGTATTATGCATGCCAACTA 57.433 39.130 16.68 0.00 0.00 2.24
743 744 4.443978 AGGAGTATTATGCATGCCAACT 57.556 40.909 16.68 10.91 0.00 3.16
744 745 6.824305 AATAGGAGTATTATGCATGCCAAC 57.176 37.500 16.68 6.08 0.00 3.77
745 746 6.593770 CGTAATAGGAGTATTATGCATGCCAA 59.406 38.462 16.68 9.84 34.34 4.52
746 747 6.106003 CGTAATAGGAGTATTATGCATGCCA 58.894 40.000 16.68 3.52 34.34 4.92
747 748 5.523916 CCGTAATAGGAGTATTATGCATGCC 59.476 44.000 16.68 0.00 37.02 4.40
748 749 5.523916 CCCGTAATAGGAGTATTATGCATGC 59.476 44.000 11.82 11.82 37.02 4.06
749 750 6.640518 ACCCGTAATAGGAGTATTATGCATG 58.359 40.000 10.16 0.00 37.02 4.06
750 751 6.869206 ACCCGTAATAGGAGTATTATGCAT 57.131 37.500 3.79 3.79 37.02 3.96
751 752 6.127535 GCTACCCGTAATAGGAGTATTATGCA 60.128 42.308 0.00 0.00 37.02 3.96
752 753 6.271566 GCTACCCGTAATAGGAGTATTATGC 58.728 44.000 0.00 0.00 37.02 3.14
753 754 6.606395 AGGCTACCCGTAATAGGAGTATTATG 59.394 42.308 0.00 0.00 37.66 1.90
754 755 6.739664 AGGCTACCCGTAATAGGAGTATTAT 58.260 40.000 0.00 0.00 34.34 1.28
755 756 6.144845 AGGCTACCCGTAATAGGAGTATTA 57.855 41.667 0.00 0.00 35.76 0.98
756 757 5.008165 AGGCTACCCGTAATAGGAGTATT 57.992 43.478 0.00 0.00 35.76 1.89
757 758 4.671596 AGGCTACCCGTAATAGGAGTAT 57.328 45.455 0.00 0.00 35.76 2.12
758 759 4.459852 AAGGCTACCCGTAATAGGAGTA 57.540 45.455 0.00 0.00 35.76 2.59
759 760 3.325359 AAGGCTACCCGTAATAGGAGT 57.675 47.619 0.00 0.00 35.76 3.85
760 761 5.014858 TGATAAGGCTACCCGTAATAGGAG 58.985 45.833 0.00 0.00 35.76 3.69
761 762 4.768968 GTGATAAGGCTACCCGTAATAGGA 59.231 45.833 0.00 0.00 35.76 2.94
762 763 4.771054 AGTGATAAGGCTACCCGTAATAGG 59.229 45.833 0.00 0.00 35.76 2.57
763 764 5.979288 AGTGATAAGGCTACCCGTAATAG 57.021 43.478 0.00 0.00 35.76 1.73
764 765 5.510179 GCAAGTGATAAGGCTACCCGTAATA 60.510 44.000 0.00 0.00 35.76 0.98
765 766 4.742743 GCAAGTGATAAGGCTACCCGTAAT 60.743 45.833 0.00 0.00 35.76 1.89
766 767 3.431207 GCAAGTGATAAGGCTACCCGTAA 60.431 47.826 0.00 0.00 35.76 3.18
767 768 2.101917 GCAAGTGATAAGGCTACCCGTA 59.898 50.000 0.00 0.00 35.76 4.02
768 769 1.134491 GCAAGTGATAAGGCTACCCGT 60.134 52.381 0.00 0.00 35.76 5.28
769 770 1.134521 TGCAAGTGATAAGGCTACCCG 60.135 52.381 0.00 0.00 35.76 5.28
770 771 2.683362 GTTGCAAGTGATAAGGCTACCC 59.317 50.000 0.00 0.00 0.00 3.69
771 772 2.351726 CGTTGCAAGTGATAAGGCTACC 59.648 50.000 0.00 0.00 0.00 3.18
772 773 3.259064 TCGTTGCAAGTGATAAGGCTAC 58.741 45.455 0.00 0.00 0.00 3.58
773 774 3.603158 TCGTTGCAAGTGATAAGGCTA 57.397 42.857 0.00 0.00 0.00 3.93
774 775 2.472695 TCGTTGCAAGTGATAAGGCT 57.527 45.000 0.00 0.00 0.00 4.58
775 776 2.724839 CGTTCGTTGCAAGTGATAAGGC 60.725 50.000 0.00 0.00 0.00 4.35
776 777 2.734606 TCGTTCGTTGCAAGTGATAAGG 59.265 45.455 0.00 0.00 0.00 2.69
924 925 8.564574 TGTTGTTCTGTCCTTTTATGTTATGTC 58.435 33.333 0.00 0.00 0.00 3.06
925 926 8.458573 TGTTGTTCTGTCCTTTTATGTTATGT 57.541 30.769 0.00 0.00 0.00 2.29
926 927 9.559958 GATGTTGTTCTGTCCTTTTATGTTATG 57.440 33.333 0.00 0.00 0.00 1.90
927 928 9.295825 TGATGTTGTTCTGTCCTTTTATGTTAT 57.704 29.630 0.00 0.00 0.00 1.89
928 929 8.684386 TGATGTTGTTCTGTCCTTTTATGTTA 57.316 30.769 0.00 0.00 0.00 2.41
929 930 7.255590 CCTGATGTTGTTCTGTCCTTTTATGTT 60.256 37.037 0.00 0.00 0.00 2.71
1057 1064 2.860735 GTGACACGAAGCATGATAGGAC 59.139 50.000 0.00 0.00 0.00 3.85
1058 1065 2.159099 GGTGACACGAAGCATGATAGGA 60.159 50.000 0.00 0.00 0.00 2.94
1059 1066 2.205074 GGTGACACGAAGCATGATAGG 58.795 52.381 0.00 0.00 0.00 2.57
1403 1419 0.324091 GTAGAGGTGGAAGGACGGGA 60.324 60.000 0.00 0.00 0.00 5.14
1743 1769 1.021390 AGCGGTTCAAGGCGAATCTG 61.021 55.000 0.00 0.00 35.63 2.90
1767 1793 4.467084 CTAGCCGGCCGCCAGAAA 62.467 66.667 26.15 0.00 38.78 2.52
1838 1871 1.600957 CATCAAGTAATCGGCAGGCAG 59.399 52.381 0.00 0.00 0.00 4.85
1919 1956 3.186909 GGAAACTTGTGCAAGAAACCAC 58.813 45.455 17.62 0.00 40.79 4.16
1948 1985 7.328249 TCTGCAAAGCCTATTTTAAAATGTTCG 59.672 33.333 21.19 8.33 0.00 3.95
1984 2021 2.860735 CAGAGTAAGTGCATAGCGGTTC 59.139 50.000 0.00 0.00 0.00 3.62
2042 2085 4.098501 AGAAAACTCAAGCTCAGGGTTTTG 59.901 41.667 25.69 3.36 39.27 2.44
2139 2182 6.212187 CAGGGTGGTATCTAGATGATTGATCA 59.788 42.308 15.79 0.00 41.70 2.92
2155 2200 3.082619 CCACTCTTCCAGGGTGGTA 57.917 57.895 13.93 0.00 43.72 3.25
2169 2214 5.133221 AGTTGTTTGAGATTGCTAACCACT 58.867 37.500 0.00 0.00 29.51 4.00
2170 2215 5.438761 AGTTGTTTGAGATTGCTAACCAC 57.561 39.130 0.00 0.00 0.00 4.16
2312 2357 0.668535 GAACAAGCTGTGGGGTCAAC 59.331 55.000 0.00 0.00 0.00 3.18
2499 2558 0.106519 AACTGGTGTGCCTGAAAGCT 60.107 50.000 0.00 0.00 37.43 3.74
2500 2559 0.031178 CAACTGGTGTGCCTGAAAGC 59.969 55.000 0.00 0.00 37.43 3.51
2501 2560 0.031178 GCAACTGGTGTGCCTGAAAG 59.969 55.000 0.00 0.00 37.43 2.62
2502 2561 0.682532 TGCAACTGGTGTGCCTGAAA 60.683 50.000 0.00 0.00 37.43 2.69
2503 2562 0.682532 TTGCAACTGGTGTGCCTGAA 60.683 50.000 0.00 0.00 37.43 3.02
2504 2563 0.467844 ATTGCAACTGGTGTGCCTGA 60.468 50.000 0.00 0.00 37.43 3.86
2505 2564 0.390124 AATTGCAACTGGTGTGCCTG 59.610 50.000 0.00 0.00 39.33 4.85
2545 2604 2.582052 TGTTGGCAAGAAACGGAATCT 58.418 42.857 0.00 0.00 0.00 2.40
2553 2612 2.691011 GGTACCTGTTGTTGGCAAGAAA 59.309 45.455 11.72 1.13 34.94 2.52
2582 2644 1.813859 CCAGATGCGGTCGTAGGAA 59.186 57.895 0.00 0.00 0.00 3.36
2615 2677 3.761140 TTGGTCCACGCGGCGATA 61.761 61.111 30.94 10.67 0.00 2.92
2621 2683 1.009903 TCGTTATGTTGGTCCACGCG 61.010 55.000 3.53 3.53 0.00 6.01
2654 2716 3.059982 CTGGCCTTGGAGACGTCA 58.940 61.111 19.50 0.00 0.00 4.35
2738 2800 0.982852 TGTCCGGGCTCCATGAGAAT 60.983 55.000 7.97 0.00 0.00 2.40
2839 2901 2.835701 GATGTCGAACCGCCTCAGCA 62.836 60.000 0.00 0.00 39.83 4.41
2992 3054 1.002403 TTCAGGATGGGCGGGAGTA 59.998 57.895 0.00 0.00 36.16 2.59
3133 3195 7.759489 ACAAATAATTCAAAGCTACTGGACA 57.241 32.000 0.00 0.00 0.00 4.02
3193 3258 6.127842 GGCTGTTAATATGGAAAAACGGAGAA 60.128 38.462 0.00 0.00 31.25 2.87
3194 3259 5.355910 GGCTGTTAATATGGAAAAACGGAGA 59.644 40.000 0.00 0.00 31.25 3.71
3195 3260 5.124776 TGGCTGTTAATATGGAAAAACGGAG 59.875 40.000 0.00 0.00 31.25 4.63
3939 4016 5.556915 AGGTGTAAGTTAGCTATGCAAACA 58.443 37.500 0.00 0.00 0.00 2.83
4258 4371 5.533528 TGCCATCCATGTATCTGAAATCAAG 59.466 40.000 0.00 0.00 0.00 3.02
4265 4378 5.005740 GCTATTTGCCATCCATGTATCTGA 58.994 41.667 0.00 0.00 35.15 3.27
4825 4940 5.129634 TGTGCTTCTCTAAAATGTTGTCCA 58.870 37.500 0.00 0.00 0.00 4.02
5057 5221 3.325716 AGAGCATCCAAAAACATGGCTTT 59.674 39.130 0.00 0.00 40.46 3.51
5196 5367 4.230314 TGATGCGATCTTGCTACTACTC 57.770 45.455 0.00 0.00 35.36 2.59
5247 5418 1.135721 GGCAGATGGATGAGGTTTTGC 59.864 52.381 0.00 0.00 0.00 3.68
5694 5867 3.190744 AGTCAGCAATGCTCTCAATGTTG 59.809 43.478 4.03 0.00 36.40 3.33
5748 5921 1.903183 AGCTCTGTAACCTTCCAGACC 59.097 52.381 0.00 0.00 34.20 3.85
6211 6384 1.766494 TATGTGCAGCCCCATTTGAG 58.234 50.000 0.00 0.00 0.00 3.02
6317 6490 4.519350 GGATTCTCCCCCGCTAAATAAAAG 59.481 45.833 0.00 0.00 0.00 2.27
6322 6495 1.421646 CAGGATTCTCCCCCGCTAAAT 59.578 52.381 0.00 0.00 37.19 1.40
6324 6497 1.696097 GCAGGATTCTCCCCCGCTAA 61.696 60.000 0.00 0.00 37.19 3.09
6617 6815 3.012722 CCGGGACCAAAGGCCCTA 61.013 66.667 0.00 0.00 37.05 3.53
6633 6831 3.989787 CCAAAGGCGGCACCAACC 61.990 66.667 13.08 0.00 43.14 3.77
6634 6832 3.207547 GACCAAAGGCGGCACCAAC 62.208 63.158 13.08 0.00 43.14 3.77
6635 6833 2.909965 GACCAAAGGCGGCACCAA 60.910 61.111 13.08 0.00 43.14 3.67
6636 6834 4.966787 GGACCAAAGGCGGCACCA 62.967 66.667 13.08 0.00 43.14 4.17
6641 6839 4.653888 AACCGGGACCAAAGGCGG 62.654 66.667 6.32 4.74 33.28 6.13
6642 6840 3.361977 CAACCGGGACCAAAGGCG 61.362 66.667 6.32 0.00 0.00 5.52
6643 6841 2.989253 CCAACCGGGACCAAAGGC 60.989 66.667 6.32 0.00 40.01 4.35
6644 6842 1.901464 CACCAACCGGGACCAAAGG 60.901 63.158 6.32 0.00 41.15 3.11
6645 6843 2.561037 GCACCAACCGGGACCAAAG 61.561 63.158 6.32 0.00 41.15 2.77
6646 6844 2.519780 GCACCAACCGGGACCAAA 60.520 61.111 6.32 0.00 41.15 3.28
6647 6845 4.589675 GGCACCAACCGGGACCAA 62.590 66.667 6.32 0.00 41.15 3.67
6879 7156 9.384764 GTTTCCTTCATTTGATTACTAGCTAGT 57.615 33.333 28.50 28.50 40.24 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.