AutoCloner

Multiple sequence alignment - TraesCS5D01G094800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS5D01G094800	chr5D	100.000	2456	0	0	1	2456	104262399	104259944	0.000000e+00	4536.0
1	TraesCS5D01G094800	chr5D	84.858	317	46	2	1757	2071	484037578	484037262	3.940000e-83	318.0
2	TraesCS5D01G094800	chr5B	92.471	1647	93	11	1	1644	113693020	113691402	0.000000e+00	2326.0
3	TraesCS5D01G094800	chr5B	91.913	507	38	3	1641	2147	113689850	113689347	0.000000e+00	706.0
4	TraesCS5D01G094800	chr5B	97.688	173	3	1	2258	2429	113687893	113687721	1.850000e-76	296.0
5	TraesCS5D01G094800	chr5B	95.690	116	4	1	2151	2265	113688912	113688797	4.170000e-43	185.0
6	TraesCS5D01G094800	chr6A	93.173	1084	71	2	416	1497	602163145	602164227	0.000000e+00	1589.0
7	TraesCS5D01G094800	chr5A	93.990	965	52	2	538	1496	606926571	606927535	0.000000e+00	1456.0
8	TraesCS5D01G094800	chr5A	94.444	54	2	1	487	540	606917730	606917782	5.630000e-12	82.4
9	TraesCS5D01G094800	chr7A	88.889	1143	100	15	368	1497	691614440	691615568	0.000000e+00	1382.0
10	TraesCS5D01G094800	chr7A	93.548	372	22	2	1136	1506	549122984	549123354	9.920000e-154	553.0
11	TraesCS5D01G094800	chr7A	84.923	325	46	3	1749	2071	627013162	627012839	2.360000e-85	326.0
12	TraesCS5D01G094800	chr7A	82.720	353	57	3	1759	2107	311307264	311306912	6.590000e-81	311.0
13	TraesCS5D01G094800	chr7A	76.419	229	49	5	1521	1747	57472045	57471820	4.290000e-23	119.0
14	TraesCS5D01G094800	chr6D	95.585	838	34	3	661	1496	272820115	272820951	0.000000e+00	1339.0
15	TraesCS5D01G094800	chr6D	95.585	838	34	3	661	1496	272844725	272845561	0.000000e+00	1339.0
16	TraesCS5D01G094800	chr6D	95.465	838	35	3	661	1496	272798985	272799821	0.000000e+00	1334.0
17	TraesCS5D01G094800	chr6D	85.950	363	49	2	1743	2103	128911651	128912013	1.070000e-103	387.0
18	TraesCS5D01G094800	chr7D	89.928	417	39	2	1082	1498	403773947	403774360	3.590000e-148	534.0
19	TraesCS5D01G094800	chr7D	82.571	350	55	6	1759	2103	277748047	277747699	1.100000e-78	303.0
20	TraesCS5D01G094800	chr7D	78.774	212	39	6	1539	1748	50644611	50644404	1.180000e-28	137.0
21	TraesCS5D01G094800	chr1D	86.218	312	39	4	1757	2065	150936922	150936612	3.910000e-88	335.0
22	TraesCS5D01G094800	chr3B	84.709	327	44	6	1749	2071	556494748	556494424	3.050000e-84	322.0
23	TraesCS5D01G094800	chr3B	72.911	395	107	0	24	418	548135650	548135256	1.180000e-28	137.0
24	TraesCS5D01G094800	chr7B	84.375	320	48	2	1750	2067	727121859	727121540	1.830000e-81	313.0
25	TraesCS5D01G094800	chr7B	83.043	230	33	6	1521	1747	302519772	302519546	1.150000e-48	204.0
26	TraesCS5D01G094800	chr7B	82.629	213	32	5	1539	1749	738792567	738792776	1.500000e-42	183.0
27	TraesCS5D01G094800	chr7B	81.304	230	37	6	1521	1747	302552924	302552698	5.400000e-42	182.0
28	TraesCS5D01G094800	chr2D	86.047	215	29	1	1539	1753	277864673	277864886	1.900000e-56	230.0
29	TraesCS5D01G094800	chr2A	77.542	236	44	9	1521	1751	531321352	531321583	1.530000e-27	134.0
30	TraesCS5D01G094800	chr4A	78.571	210	37	8	1541	1747	369771500	369771704	5.510000e-27	132.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS5D01G094800	chr5D	104259944	104262399	2455	True	4536.00	4536	100.0000	1	2456	1	chr5D.!!$R1	2455
1	TraesCS5D01G094800	chr5B	113687721	113693020	5299	True	878.25	2326	94.4405	1	2429	4	chr5B.!!$R1	2428
2	TraesCS5D01G094800	chr6A	602163145	602164227	1082	False	1589.00	1589	93.1730	416	1497	1	chr6A.!!$F1	1081
3	TraesCS5D01G094800	chr5A	606926571	606927535	964	False	1456.00	1456	93.9900	538	1496	1	chr5A.!!$F2	958
4	TraesCS5D01G094800	chr7A	691614440	691615568	1128	False	1382.00	1382	88.8890	368	1497	1	chr7A.!!$F2	1129
5	TraesCS5D01G094800	chr6D	272820115	272820951	836	False	1339.00	1339	95.5850	661	1496	1	chr6D.!!$F3	835
6	TraesCS5D01G094800	chr6D	272844725	272845561	836	False	1339.00	1339	95.5850	661	1496	1	chr6D.!!$F4	835
7	TraesCS5D01G094800	chr6D	272798985	272799821	836	False	1334.00	1334	95.4650	661	1496	1	chr6D.!!$F2	835

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
866	867	1.137086	GGAGAAGCATAACTCGGCAGA	59.863	52.381	0.0	0.0	34.4	4.26	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1878	3452	0.250989	TTCTTTGGTTGGGGTAGCGG	60.251	55.0	0.0	0.0	0.0	5.52	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
39	40	5.123227	TCCTTCTGGTGACTTGTTAAACTG	58.877	41.667	0.00	0.00	34.23	3.16
66	67	7.350921	TGATTTAAAGAAGGGATCCTCCTATGT	59.649	37.037	12.58	0.00	36.57	2.29
68	69	7.857404	TTAAAGAAGGGATCCTCCTATGTAG	57.143	40.000	12.58	0.00	36.57	2.74
71	72	2.455064	AGGGATCCTCCTATGTAGGGT	58.545	52.381	12.58	0.00	43.79	4.34
85	86	3.340034	TGTAGGGTAAAGCATTTGGTCG	58.660	45.455	0.00	0.00	39.63	4.79
110	111	3.923648	ACCCAGACTTTTAAAAAGGGCT	58.076	40.909	19.48	8.09	38.39	5.19
156	157	7.439056	CGAATTGAAAATCAATATTTGGGAGGG	59.561	37.037	6.05	0.00	45.57	4.30
182	183	3.178046	TGGATACCAAACAGTAGCTCCA	58.822	45.455	0.00	0.00	31.79	3.86
184	185	3.432326	GGATACCAAACAGTAGCTCCAGG	60.432	52.174	0.00	0.00	0.00	4.45
194	195	4.591072	ACAGTAGCTCCAGGAAGATTATCC	59.409	45.833	0.00	0.00	39.96	2.59
195	196	4.020662	CAGTAGCTCCAGGAAGATTATCCC	60.021	50.000	0.00	0.00	40.59	3.85
196	197	3.359110	AGCTCCAGGAAGATTATCCCT	57.641	47.619	0.00	0.00	40.59	4.20
234	235	6.159988	GTGTTCTCACTACAGTTAATGAGCT	58.840	40.000	0.00	0.00	40.98	4.09
243	244	7.436673	CACTACAGTTAATGAGCTCATAAGTCC	59.563	40.741	28.92	14.89	35.10	3.85
357	358	7.415541	GCATGACACTGAGGATTTTATTGCTTA	60.416	37.037	0.00	0.00	0.00	3.09
407	408	3.082548	GTCCGCTCAGCATACTATAGGA	58.917	50.000	4.43	0.00	0.00	2.94
433	434	3.312697	GGAAGGAATGCTACGAATCCAAC	59.687	47.826	0.00	0.00	34.30	3.77
559	560	1.647545	CGCATGACGCAATTCCCTGT	61.648	55.000	0.00	0.00	42.60	4.00
612	613	2.901839	AGTCTGCTCAATGCCCAATTTT	59.098	40.909	0.00	0.00	42.00	1.82
618	619	3.306225	GCTCAATGCCCAATTTTCTCACA	60.306	43.478	0.00	0.00	35.15	3.58
730	731	1.331399	TGGCAATACCGGGTCGATCA	61.331	55.000	6.32	0.00	43.94	2.92
754	755	7.067372	TCAGGCGTTGAAATCATTGAGATATTT	59.933	33.333	0.00	0.00	35.39	1.40
768	769	5.922053	TGAGATATTTCTGTGTGATCCAGG	58.078	41.667	0.00	0.00	30.30	4.45
797	798	7.092623	ACAACACTAAATATATGGACCAGGTGA	60.093	37.037	0.00	0.00	0.00	4.02
842	843	2.854963	CATCATGGTATCTGTGGTGGG	58.145	52.381	0.00	0.00	0.00	4.61
866	867	1.137086	GGAGAAGCATAACTCGGCAGA	59.863	52.381	0.00	0.00	34.40	4.26
892	893	2.032634	GCAATCTCCAACGCGGACA	61.033	57.895	12.47	0.00	39.64	4.02
1000	1003	3.329520	ACCACTACTGAATTAGTTGGCCA	59.670	43.478	0.00	0.00	40.89	5.36
1033	1036	6.880243	ACGCTGCGTTTTCAGAGGATACTT	62.880	45.833	23.57	0.00	43.55	2.24
1067	1070	1.525077	GCGCCATTATCCGGGACAA	60.525	57.895	0.00	0.00	0.00	3.18
1069	1077	0.462937	CGCCATTATCCGGGACAACA	60.463	55.000	0.00	0.00	0.00	3.33
1114	1122	4.717233	ACAGCAAAACTTGAACATGTCA	57.283	36.364	0.00	0.00	0.00	3.58
1131	1139	0.821517	TCACGGATGTGTTATCGGCT	59.178	50.000	0.00	0.00	46.49	5.52
1203	1211	2.143876	ACTCCTTGTTGGTGCAAACT	57.856	45.000	3.11	0.00	37.07	2.66
1364	1374	2.202987	GGCTCATGTGCTAGCGCT	60.203	61.111	27.36	17.26	39.71	5.92
1571	1591	4.179926	TGATCAGTGTTGTCTGCTCTAC	57.820	45.455	0.00	0.00	33.45	2.59
1595	1615	5.131594	ACCCTCTCGTGTAAGAAACTTAC	57.868	43.478	12.81	12.81	0.00	2.34
1652	1672	1.140312	TTGGACCCTCTCAAACAGCT	58.860	50.000	0.00	0.00	0.00	4.24
1657	3231	2.737252	GACCCTCTCAAACAGCTTTACG	59.263	50.000	0.00	0.00	0.00	3.18
1721	3295	4.082679	ACACACGATCACTAAGAGAAGGTC	60.083	45.833	0.00	0.00	0.00	3.85
1761	3335	0.037697	TAGTGACACGCCATCCACAC	60.038	55.000	0.00	0.00	32.35	3.82
1812	3386	1.667151	GCTTTGCCAATGAGCACCA	59.333	52.632	0.00	0.00	43.97	4.17
1871	3445	1.553248	CCTTGATACCACCTCAACCGA	59.447	52.381	0.00	0.00	0.00	4.69
1878	3452	3.692406	ACCTCAACCGAGACCCGC	61.692	66.667	0.00	0.00	42.34	6.13
1880	3454	4.796231	CTCAACCGAGACCCGCCG	62.796	72.222	0.00	0.00	42.34	6.46
1900	3474	1.268625	GCTACCCCAACCAAAGAAACG	59.731	52.381	0.00	0.00	0.00	3.60
1956	3530	2.499205	CAGCGGCGAGACCCAATA	59.501	61.111	12.98	0.00	33.26	1.90
1957	3531	1.592669	CAGCGGCGAGACCCAATAG	60.593	63.158	12.98	0.00	33.26	1.73
1958	3532	2.280186	GCGGCGAGACCCAATAGG	60.280	66.667	12.98	0.00	43.78	2.57
1994	3568	0.392863	TCTATCGACCCGTCCAACGA	60.393	55.000	0.24	0.00	46.05	3.85
1997	3571	2.482296	ATCGACCCGTCCAACGACAC	62.482	60.000	0.24	0.00	46.05	3.67
2008	3582	3.876589	AACGACACTGGGCGCGAAT	62.877	57.895	12.10	0.00	0.00	3.34
2050	3624	4.536316	GAGACGAGCTCGGTCCTA	57.464	61.111	36.93	0.00	44.95	2.94
2116	3690	3.389329	TCTGCCCTTTAACCATGCAAAAA	59.611	39.130	0.00	0.00	0.00	1.94
2147	3721	8.135382	ACAGAGAAGTACAAGTGTATTGGTAT	57.865	34.615	0.00	0.00	32.54	2.73
2149	3723	8.873830	CAGAGAAGTACAAGTGTATTGGTATTG	58.126	37.037	0.00	0.00	32.54	1.90
2291	5208	6.255670	TGATGCGAGTATCATAACAGTGAAAC	59.744	38.462	0.00	0.00	32.39	2.78
2445	5363	4.847444	GCCTCTGCTTCGGCTCCC	62.847	72.222	3.89	0.00	42.98	4.30
2446	5364	4.168291	CCTCTGCTTCGGCTCCCC	62.168	72.222	0.00	0.00	42.37	4.81
2447	5365	4.168291	CTCTGCTTCGGCTCCCCC	62.168	72.222	0.00	0.00	42.37	5.40

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
21	22	6.377327	AATCACAGTTTAACAAGTCACCAG	57.623	37.500	0.00	0.00	0.00	4.00
66	67	2.356330	CCCGACCAAATGCTTTACCCTA	60.356	50.000	0.00	0.00	0.00	3.53
68	69	0.815095	CCCGACCAAATGCTTTACCC	59.185	55.000	0.00	0.00	0.00	3.69
85	86	4.039973	CCCTTTTTAAAAGTCTGGGTTCCC	59.960	45.833	15.19	0.12	0.00	3.97
110	111	3.055458	TCGTTTCCAACTCTCCATATGCA	60.055	43.478	0.00	0.00	0.00	3.96
111	112	3.531538	TCGTTTCCAACTCTCCATATGC	58.468	45.455	0.00	0.00	0.00	3.14
132	133	7.056006	GCCCTCCCAAATATTGATTTTCAATT	58.944	34.615	7.94	0.00	44.03	2.32
156	157	3.127030	GCTACTGTTTGGTATCCAACAGC	59.873	47.826	17.54	3.85	43.82	4.40
182	183	2.366916	CACGAGCAGGGATAATCTTCCT	59.633	50.000	0.00	0.00	35.97	3.36
184	185	2.103263	ACCACGAGCAGGGATAATCTTC	59.897	50.000	0.00	0.00	0.00	2.87
194	195	1.808411	ACACAATTACCACGAGCAGG	58.192	50.000	0.00	0.00	0.00	4.85
195	196	3.067106	AGAACACAATTACCACGAGCAG	58.933	45.455	0.00	0.00	0.00	4.24
196	197	3.064207	GAGAACACAATTACCACGAGCA	58.936	45.455	0.00	0.00	0.00	4.26
234	235	2.100197	CTCCCGTGACTGGACTTATGA	58.900	52.381	0.00	0.00	0.00	2.15
243	244	0.833287	ATCCCATTCTCCCGTGACTG	59.167	55.000	0.00	0.00	0.00	3.51
313	314	7.546667	GTGTCATGCTGAAATATTGGAATTTGT	59.453	33.333	0.00	0.00	0.00	2.83
314	315	7.762615	AGTGTCATGCTGAAATATTGGAATTTG	59.237	33.333	0.00	0.00	0.00	2.32
334	335	6.094048	GCTAAGCAATAAAATCCTCAGTGTCA	59.906	38.462	0.00	0.00	0.00	3.58
357	358	1.251251	GCCTGATTTTGTGAGGTGCT	58.749	50.000	0.00	0.00	33.10	4.40
407	408	3.695830	TTCGTAGCATTCCTTCCACTT	57.304	42.857	0.00	0.00	0.00	3.16
559	560	2.543031	CCTATTAGCTAGCACGCAACGA	60.543	50.000	18.83	0.00	0.00	3.85
612	613	7.970061	GTGCTATATCTTTTGCAAATTGTGAGA	59.030	33.333	13.65	12.55	37.17	3.27
618	619	8.910944	AGAGATGTGCTATATCTTTTGCAAATT	58.089	29.630	13.65	3.97	33.98	1.82
730	731	6.949352	AATATCTCAATGATTTCAACGCCT	57.051	33.333	0.00	0.00	36.65	5.52
754	755	1.715785	TGTGTCCTGGATCACACAGA	58.284	50.000	20.69	3.74	46.26	3.41
768	769	7.226720	CCTGGTCCATATATTTAGTGTTGTGTC	59.773	40.741	0.00	0.00	0.00	3.67
797	798	2.100252	CCGCAATCAATTCAGGCAAGAT	59.900	45.455	0.00	0.00	0.00	2.40
842	843	2.544903	GCCGAGTTATGCTTCTCCTCTC	60.545	54.545	0.00	0.00	0.00	3.20
866	867	1.608590	CGTTGGAGATTGCACTGGTTT	59.391	47.619	0.00	0.00	0.00	3.27
892	893	1.001641	AGCTTGAATCGCCTGGCTT	60.002	52.632	17.92	4.82	0.00	4.35
1000	1003	1.014044	AACGCAGCGTCGACATTCAT	61.014	50.000	23.22	0.00	39.99	2.57
1114	1122	0.821517	TCAGCCGATAACACATCCGT	59.178	50.000	0.00	0.00	0.00	4.69
1203	1211	7.565398	AGAGCCTCCACTAAAATCAGACTATTA	59.435	37.037	0.00	0.00	0.00	0.98
1364	1374	3.181435	TGGTGGATCAACACTTCCATTCA	60.181	43.478	1.86	0.00	43.61	2.57
1498	1516	3.423539	AACATGGGATATGTATGCGCT	57.576	42.857	9.73	0.00	0.00	5.92
1615	1635	2.164827	CCAAACCCTAAACCATAACGGC	59.835	50.000	0.00	0.00	39.03	5.68
1616	1636	3.441222	GTCCAAACCCTAAACCATAACGG	59.559	47.826	0.00	0.00	42.50	4.44
1644	1664	3.548014	CCAGTTGGTCGTAAAGCTGTTTG	60.548	47.826	0.00	0.00	0.00	2.93
1645	1665	2.616842	CCAGTTGGTCGTAAAGCTGTTT	59.383	45.455	0.00	0.00	0.00	2.83
1647	1667	1.414919	TCCAGTTGGTCGTAAAGCTGT	59.585	47.619	0.00	0.00	36.34	4.40
1648	1668	2.163818	TCCAGTTGGTCGTAAAGCTG	57.836	50.000	0.00	0.00	36.34	4.24
1650	1670	3.071479	TCAATCCAGTTGGTCGTAAAGC	58.929	45.455	0.00	0.00	38.39	3.51
1652	1672	5.048364	CCATTTCAATCCAGTTGGTCGTAAA	60.048	40.000	0.00	0.00	38.39	2.01
1657	3231	3.119849	CGACCATTTCAATCCAGTTGGTC	60.120	47.826	9.33	9.33	46.13	4.02
1700	3274	4.079970	TGACCTTCTCTTAGTGATCGTGT	58.920	43.478	0.00	0.00	0.00	4.49
1741	3315	0.901827	TGTGGATGGCGTGTCACTAT	59.098	50.000	0.65	0.00	0.00	2.12
1775	3349	4.436998	CGTGGCTCGGTCCTGTCC	62.437	72.222	0.13	0.00	35.71	4.02
1801	3375	2.401766	GGCTCCGTGGTGCTCATTG	61.402	63.158	12.22	0.00	35.28	2.82
1802	3376	2.045926	GGCTCCGTGGTGCTCATT	60.046	61.111	12.22	0.00	35.28	2.57
1841	3415	0.466372	GGTATCAAGGGCTTGGAGGC	60.466	60.000	0.00	0.00	40.78	4.70
1878	3452	0.250989	TTCTTTGGTTGGGGTAGCGG	60.251	55.000	0.00	0.00	0.00	5.52
1880	3454	1.268625	CGTTTCTTTGGTTGGGGTAGC	59.731	52.381	0.00	0.00	0.00	3.58
1900	3474	2.436824	GGCGGGTCCTTTCTGCTC	60.437	66.667	0.00	0.00	36.77	4.26
1977	3551	0.959867	TGTCGTTGGACGGGTCGATA	60.960	55.000	0.27	0.00	46.49	2.92
2005	3579	1.026718	CAGCAAGACCGACCCCATTC	61.027	60.000	0.00	0.00	0.00	2.67
2008	3582	2.847234	ACAGCAAGACCGACCCCA	60.847	61.111	0.00	0.00	0.00	4.96
2038	3612	2.809010	GGCAGTAGGACCGAGCTC	59.191	66.667	2.73	2.73	0.00	4.09
2050	3624	4.406173	CGTCTCGTGCTCGGCAGT	62.406	66.667	8.49	0.00	40.08	4.40
2058	3632	3.499737	CCATTGCCCGTCTCGTGC	61.500	66.667	0.00	0.00	0.00	5.34
2060	3634	1.144057	GATCCATTGCCCGTCTCGT	59.856	57.895	0.00	0.00	0.00	4.18
2071	3645	2.194056	CCCCAGCTGCGATCCATT	59.806	61.111	8.66	0.00	0.00	3.16
2118	3692	9.436957	CCAATACACTTGTACTTCTCTGTAATT	57.563	33.333	0.00	0.00	32.72	1.40
2119	3693	8.594550	ACCAATACACTTGTACTTCTCTGTAAT	58.405	33.333	0.00	0.00	32.72	1.89
2124	3698	8.812972	TCAATACCAATACACTTGTACTTCTCT	58.187	33.333	0.00	0.00	32.72	3.10
2147	3721	9.352784	CAACACACTTGTTTCTTTTTAGATCAA	57.647	29.630	0.00	0.00	43.89	2.57
2149	3723	7.973944	ACCAACACACTTGTTTCTTTTTAGATC	59.026	33.333	0.00	0.00	43.89	2.75
2172	4177	2.700722	TGCTTCATGCGGTAATACCA	57.299	45.000	10.40	0.00	46.63	3.25
2181	4186	8.641155	CAAAACCATATATTTATGCTTCATGCG	58.359	33.333	0.00	0.00	46.63	4.73
2291	5208	2.675844	TGAGCGTCCAATTTATGAACCG	59.324	45.455	0.00	0.00	0.00	4.44
2317	5234	5.635280	TGATTCTCACAACGAAATGTCTCTC	59.365	40.000	0.00	0.00	0.00	3.20
2429	5347	4.168291	GGGGAGCCGAAGCAGAGG	62.168	72.222	0.00	0.00	43.56	3.69
2430	5348	4.168291	GGGGGAGCCGAAGCAGAG	62.168	72.222	0.00	0.00	43.56	3.35

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.