Multiple sequence alignment - TraesCS5D01G093600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G093600 chr5D 100.000 4046 0 0 1 4046 102333121 102329076 0.000000e+00 7472.0
1 TraesCS5D01G093600 chr5D 93.636 110 4 3 3939 4046 27486820 27486928 1.160000e-35 161.0
2 TraesCS5D01G093600 chr5B 96.907 3136 74 8 817 3946 112021745 112018627 0.000000e+00 5232.0
3 TraesCS5D01G093600 chr5B 92.281 570 29 11 140 702 112022423 112021862 0.000000e+00 795.0
4 TraesCS5D01G093600 chr5B 96.639 119 3 1 716 834 112021879 112021762 3.190000e-46 196.0
5 TraesCS5D01G093600 chr5B 80.000 110 16 6 392 498 705620455 705620561 4.340000e-10 76.8
6 TraesCS5D01G093600 chr5A 96.267 3161 81 14 796 3947 96983394 96986526 0.000000e+00 5149.0
7 TraesCS5D01G093600 chr5A 92.808 292 18 3 137 426 96982408 96982698 1.740000e-113 420.0
8 TraesCS5D01G093600 chr5A 90.000 290 14 6 418 702 96983024 96983303 1.070000e-95 361.0
9 TraesCS5D01G093600 chr5A 96.842 95 2 1 716 810 96983286 96983379 1.510000e-34 158.0
10 TraesCS5D01G093600 chr3A 84.639 1979 267 29 1075 3036 19988359 19990317 0.000000e+00 1936.0
11 TraesCS5D01G093600 chr3A 84.091 264 39 3 1165 1428 736084270 736084530 6.710000e-63 252.0
12 TraesCS5D01G093600 chr1D 85.242 1904 251 18 1165 3044 32738145 32740042 0.000000e+00 1932.0
13 TraesCS5D01G093600 chr1D 89.474 76 2 5 3621 3693 141544729 141544657 1.550000e-14 91.6
14 TraesCS5D01G093600 chr3B 85.561 1863 243 25 1191 3039 24019166 24017316 0.000000e+00 1927.0
15 TraesCS5D01G093600 chr3B 76.555 1881 381 53 1196 3037 609801992 609803851 0.000000e+00 976.0
16 TraesCS5D01G093600 chr1B 84.648 1915 255 26 1165 3047 50204094 50206001 0.000000e+00 1871.0
17 TraesCS5D01G093600 chr1B 93.805 113 7 0 3934 4046 158157850 158157738 1.930000e-38 171.0
18 TraesCS5D01G093600 chr1B 93.519 108 7 0 3939 4046 449745364 449745471 1.160000e-35 161.0
19 TraesCS5D01G093600 chr1B 92.174 115 7 2 3934 4046 616384541 616384655 1.160000e-35 161.0
20 TraesCS5D01G093600 chr1A 84.286 1890 256 29 1187 3044 31254306 31252426 0.000000e+00 1807.0
21 TraesCS5D01G093600 chr3D 76.792 1883 373 58 1196 3037 460180050 460181909 0.000000e+00 998.0
22 TraesCS5D01G093600 chr3D 99.301 143 0 1 1 142 167049084 167049226 1.440000e-64 257.0
23 TraesCS5D01G093600 chr3D 87.342 79 6 4 3620 3694 48817553 48817475 2.000000e-13 87.9
24 TraesCS5D01G093600 chr7D 92.574 404 20 8 3552 3947 608862399 608861998 4.540000e-159 571.0
25 TraesCS5D01G093600 chr7D 94.495 109 4 2 3939 4046 379058671 379058778 2.500000e-37 167.0
26 TraesCS5D01G093600 chr6B 96.815 157 2 3 1 154 576275764 576275920 4.010000e-65 259.0
27 TraesCS5D01G093600 chrUn 97.973 148 2 1 1 147 175485871 175485724 5.190000e-64 255.0
28 TraesCS5D01G093600 chrUn 99.291 141 1 0 1 141 311746911 311747051 5.190000e-64 255.0
29 TraesCS5D01G093600 chrUn 99.291 141 1 0 1 141 355158438 355158298 5.190000e-64 255.0
30 TraesCS5D01G093600 chrUn 99.291 141 1 0 1 141 374650082 374650222 5.190000e-64 255.0
31 TraesCS5D01G093600 chrUn 99.291 141 1 0 1 141 408154377 408154237 5.190000e-64 255.0
32 TraesCS5D01G093600 chrUn 99.291 141 1 0 1 141 420393976 420394116 5.190000e-64 255.0
33 TraesCS5D01G093600 chrUn 97.315 149 3 1 1 148 98017801 98017653 6.710000e-63 252.0
34 TraesCS5D01G093600 chr7B 97.115 104 3 0 3943 4046 185030080 185029977 4.160000e-40 176.0
35 TraesCS5D01G093600 chr2B 97.059 102 2 1 3945 4046 392541586 392541686 1.930000e-38 171.0
36 TraesCS5D01G093600 chr2B 88.312 77 5 3 3619 3693 183310988 183311062 5.570000e-14 89.8
37 TraesCS5D01G093600 chr2A 92.308 117 8 1 3930 4046 752746051 752746166 9.000000e-37 165.0
38 TraesCS5D01G093600 chr2A 90.909 121 9 2 3926 4046 703094519 703094401 1.160000e-35 161.0
39 TraesCS5D01G093600 chr7A 88.636 88 7 2 3621 3708 176671838 176671922 1.990000e-18 104.0
40 TraesCS5D01G093600 chr6D 93.056 72 1 4 3617 3688 156733787 156733854 7.150000e-18 102.0
41 TraesCS5D01G093600 chr2D 93.056 72 0 4 3625 3693 193155923 193155992 2.570000e-17 100.0
42 TraesCS5D01G093600 chr4A 100.000 29 0 0 3594 3622 609567967 609567995 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G093600 chr5D 102329076 102333121 4045 True 7472.000000 7472 100.000000 1 4046 1 chr5D.!!$R1 4045
1 TraesCS5D01G093600 chr5B 112018627 112022423 3796 True 2074.333333 5232 95.275667 140 3946 3 chr5B.!!$R1 3806
2 TraesCS5D01G093600 chr5A 96982408 96986526 4118 False 1522.000000 5149 93.979250 137 3947 4 chr5A.!!$F1 3810
3 TraesCS5D01G093600 chr3A 19988359 19990317 1958 False 1936.000000 1936 84.639000 1075 3036 1 chr3A.!!$F1 1961
4 TraesCS5D01G093600 chr1D 32738145 32740042 1897 False 1932.000000 1932 85.242000 1165 3044 1 chr1D.!!$F1 1879
5 TraesCS5D01G093600 chr3B 24017316 24019166 1850 True 1927.000000 1927 85.561000 1191 3039 1 chr3B.!!$R1 1848
6 TraesCS5D01G093600 chr3B 609801992 609803851 1859 False 976.000000 976 76.555000 1196 3037 1 chr3B.!!$F1 1841
7 TraesCS5D01G093600 chr1B 50204094 50206001 1907 False 1871.000000 1871 84.648000 1165 3047 1 chr1B.!!$F1 1882
8 TraesCS5D01G093600 chr1A 31252426 31254306 1880 True 1807.000000 1807 84.286000 1187 3044 1 chr1A.!!$R1 1857
9 TraesCS5D01G093600 chr3D 460180050 460181909 1859 False 998.000000 998 76.792000 1196 3037 1 chr3D.!!$F2 1841

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
811 1153 0.315568 ACTCTGGCACTCGAGTTCAC 59.684 55.000 17.26 9.6 37.19 3.18 F
843 1219 0.530744 GTAGCGATCTCCACACCACA 59.469 55.000 0.00 0.0 0.00 4.17 F
1458 1845 1.809619 GCTGATGTACGCCGCTGAA 60.810 57.895 0.00 0.0 0.00 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1959 2349 1.966451 CCACCTGGCGTTGAAGTCC 60.966 63.158 0.0 0.0 0.00 3.85 R
2214 2640 3.785859 GTCGCCAGGATGAGCCCA 61.786 66.667 0.0 0.0 39.69 5.36 R
3244 3676 5.163457 GGAATTGAGTTGGGTGTCTGAAAAA 60.163 40.000 0.0 0.0 0.00 1.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.404507 AGCTATTGTTACGTGTTTGCTG 57.595 40.909 0.00 0.00 0.00 4.41
22 23 2.908626 GCTATTGTTACGTGTTTGCTGC 59.091 45.455 0.00 0.00 0.00 5.25
23 24 3.364964 GCTATTGTTACGTGTTTGCTGCT 60.365 43.478 0.00 0.00 0.00 4.24
24 25 2.466870 TTGTTACGTGTTTGCTGCTG 57.533 45.000 0.00 0.00 0.00 4.41
25 26 1.374560 TGTTACGTGTTTGCTGCTGT 58.625 45.000 0.00 0.00 0.00 4.40
26 27 1.740585 TGTTACGTGTTTGCTGCTGTT 59.259 42.857 0.00 0.00 0.00 3.16
27 28 2.937149 TGTTACGTGTTTGCTGCTGTTA 59.063 40.909 0.00 0.00 0.00 2.41
28 29 3.562141 TGTTACGTGTTTGCTGCTGTTAT 59.438 39.130 0.00 0.00 0.00 1.89
29 30 2.686558 ACGTGTTTGCTGCTGTTATG 57.313 45.000 0.00 0.00 0.00 1.90
30 31 1.330306 CGTGTTTGCTGCTGTTATGC 58.670 50.000 0.00 0.00 0.00 3.14
31 32 1.334870 CGTGTTTGCTGCTGTTATGCA 60.335 47.619 0.00 0.00 41.05 3.96
32 33 2.669113 CGTGTTTGCTGCTGTTATGCAT 60.669 45.455 3.79 3.79 42.48 3.96
33 34 2.664568 GTGTTTGCTGCTGTTATGCATG 59.335 45.455 10.16 0.00 42.48 4.06
34 35 2.296752 TGTTTGCTGCTGTTATGCATGT 59.703 40.909 10.16 0.00 42.48 3.21
35 36 2.919229 GTTTGCTGCTGTTATGCATGTC 59.081 45.455 10.16 2.63 42.48 3.06
36 37 2.118313 TGCTGCTGTTATGCATGTCT 57.882 45.000 10.16 0.00 42.48 3.41
37 38 2.439409 TGCTGCTGTTATGCATGTCTT 58.561 42.857 10.16 0.00 42.48 3.01
38 39 2.162809 TGCTGCTGTTATGCATGTCTTG 59.837 45.455 10.16 0.00 42.48 3.02
53 54 6.551385 CATGTCTTGCTGTTCTTCTAGTTT 57.449 37.500 0.00 0.00 0.00 2.66
54 55 5.991328 TGTCTTGCTGTTCTTCTAGTTTG 57.009 39.130 0.00 0.00 0.00 2.93
55 56 4.273480 TGTCTTGCTGTTCTTCTAGTTTGC 59.727 41.667 0.00 0.00 0.00 3.68
56 57 4.513318 GTCTTGCTGTTCTTCTAGTTTGCT 59.487 41.667 0.00 0.00 0.00 3.91
57 58 5.696724 GTCTTGCTGTTCTTCTAGTTTGCTA 59.303 40.000 0.00 0.00 0.00 3.49
58 59 5.928839 TCTTGCTGTTCTTCTAGTTTGCTAG 59.071 40.000 0.00 0.00 44.60 3.42
70 71 7.194607 TCTAGTTTGCTAGATTATTGCATGC 57.805 36.000 11.82 11.82 46.25 4.06
71 72 6.994496 TCTAGTTTGCTAGATTATTGCATGCT 59.006 34.615 20.33 1.26 46.25 3.79
72 73 8.150296 TCTAGTTTGCTAGATTATTGCATGCTA 58.850 33.333 20.33 12.49 46.25 3.49
73 74 7.199541 AGTTTGCTAGATTATTGCATGCTAG 57.800 36.000 20.33 11.08 39.44 3.42
74 75 6.769822 AGTTTGCTAGATTATTGCATGCTAGT 59.230 34.615 20.33 7.25 39.44 2.57
75 76 7.933577 AGTTTGCTAGATTATTGCATGCTAGTA 59.066 33.333 20.33 6.90 39.44 1.82
76 77 8.725148 GTTTGCTAGATTATTGCATGCTAGTAT 58.275 33.333 20.33 8.74 39.44 2.12
77 78 8.484641 TTGCTAGATTATTGCATGCTAGTATC 57.515 34.615 20.33 16.54 39.44 2.24
78 79 7.845037 TGCTAGATTATTGCATGCTAGTATCT 58.155 34.615 20.33 21.74 34.60 1.98
79 80 7.978414 TGCTAGATTATTGCATGCTAGTATCTC 59.022 37.037 22.52 14.61 34.60 2.75
80 81 8.196771 GCTAGATTATTGCATGCTAGTATCTCT 58.803 37.037 22.52 16.16 33.01 3.10
83 84 8.814931 AGATTATTGCATGCTAGTATCTCTTCT 58.185 33.333 20.33 5.38 0.00 2.85
86 87 6.968263 TTGCATGCTAGTATCTCTTCTAGT 57.032 37.500 20.33 0.00 36.84 2.57
87 88 6.567687 TGCATGCTAGTATCTCTTCTAGTC 57.432 41.667 20.33 0.00 36.84 2.59
88 89 6.064717 TGCATGCTAGTATCTCTTCTAGTCA 58.935 40.000 20.33 0.00 36.84 3.41
89 90 6.718912 TGCATGCTAGTATCTCTTCTAGTCAT 59.281 38.462 20.33 0.00 36.84 3.06
90 91 7.028962 GCATGCTAGTATCTCTTCTAGTCATG 58.971 42.308 11.37 19.40 42.65 3.07
91 92 7.094420 GCATGCTAGTATCTCTTCTAGTCATGA 60.094 40.741 23.39 0.00 42.55 3.07
92 93 8.791675 CATGCTAGTATCTCTTCTAGTCATGAA 58.208 37.037 19.20 0.00 42.55 2.57
93 94 8.932434 TGCTAGTATCTCTTCTAGTCATGAAT 57.068 34.615 0.00 0.00 36.84 2.57
94 95 9.360901 TGCTAGTATCTCTTCTAGTCATGAATT 57.639 33.333 0.00 0.00 36.84 2.17
121 122 9.807649 ATTTACTGGAATTAATCATGAACTTGC 57.192 29.630 0.00 0.00 0.00 4.01
122 123 6.212888 ACTGGAATTAATCATGAACTTGCC 57.787 37.500 0.00 0.00 0.00 4.52
123 124 5.954150 ACTGGAATTAATCATGAACTTGCCT 59.046 36.000 0.00 0.00 0.00 4.75
124 125 7.118723 ACTGGAATTAATCATGAACTTGCCTA 58.881 34.615 0.00 0.00 0.00 3.93
125 126 7.615365 ACTGGAATTAATCATGAACTTGCCTAA 59.385 33.333 0.00 0.00 0.00 2.69
126 127 8.537728 TGGAATTAATCATGAACTTGCCTAAT 57.462 30.769 0.00 0.00 0.00 1.73
127 128 9.639563 TGGAATTAATCATGAACTTGCCTAATA 57.360 29.630 0.00 0.00 0.00 0.98
132 133 9.639563 TTAATCATGAACTTGCCTAATATTCCA 57.360 29.630 0.00 0.00 0.00 3.53
133 134 8.537728 AATCATGAACTTGCCTAATATTCCAA 57.462 30.769 0.00 0.00 0.00 3.53
134 135 7.333528 TCATGAACTTGCCTAATATTCCAAC 57.666 36.000 0.00 0.00 0.00 3.77
135 136 6.889177 TCATGAACTTGCCTAATATTCCAACA 59.111 34.615 0.00 0.00 0.00 3.33
260 262 5.725490 AGAGGATCATATTGAAGTCTCCCT 58.275 41.667 0.00 0.00 37.82 4.20
275 277 0.830648 TCCCTCGATAAGCCAAGGTG 59.169 55.000 0.00 0.00 0.00 4.00
278 280 1.678728 CCTCGATAAGCCAAGGTGCAA 60.679 52.381 0.00 0.00 0.00 4.08
285 287 2.755469 CCAAGGTGCAATCGGGGG 60.755 66.667 0.00 0.00 0.00 5.40
292 294 3.508840 GCAATCGGGGGAAGCACG 61.509 66.667 0.00 0.00 0.00 5.34
353 355 7.993758 TCATTGTCCCCAAATTATGTCGTATAA 59.006 33.333 0.00 0.00 33.44 0.98
389 391 9.729281 AAATATCAATGCTTTCCAAATTGAACT 57.271 25.926 0.00 0.00 42.04 3.01
390 392 8.712285 ATATCAATGCTTTCCAAATTGAACTG 57.288 30.769 0.00 0.00 42.04 3.16
679 1021 8.507249 GGAGTTTGATGAAGGGATAATAAATCG 58.493 37.037 0.00 0.00 0.00 3.34
680 1022 9.273016 GAGTTTGATGAAGGGATAATAAATCGA 57.727 33.333 0.00 0.00 0.00 3.59
681 1023 9.799106 AGTTTGATGAAGGGATAATAAATCGAT 57.201 29.630 0.00 0.00 0.00 3.59
682 1024 9.831737 GTTTGATGAAGGGATAATAAATCGATG 57.168 33.333 0.00 0.00 0.00 3.84
768 1110 3.217743 ACGGCCGACTAGCTAGCC 61.218 66.667 35.90 15.47 42.18 3.93
811 1153 0.315568 ACTCTGGCACTCGAGTTCAC 59.684 55.000 17.26 9.60 37.19 3.18
843 1219 0.530744 GTAGCGATCTCCACACCACA 59.469 55.000 0.00 0.00 0.00 4.17
844 1220 0.530744 TAGCGATCTCCACACCACAC 59.469 55.000 0.00 0.00 0.00 3.82
871 1247 9.054922 CAATATTCCAAAGTTCAAACCAAACAT 57.945 29.630 0.00 0.00 0.00 2.71
913 1289 6.759827 AGCAAACCACCTATATTAACGTACAG 59.240 38.462 0.00 0.00 0.00 2.74
1287 1674 2.852075 TCCGGCAAGTCCACCCTT 60.852 61.111 0.00 0.00 34.01 3.95
1458 1845 1.809619 GCTGATGTACGCCGCTGAA 60.810 57.895 0.00 0.00 0.00 3.02
1659 2046 2.962569 CTGTTCCTCGACGAGCCA 59.037 61.111 19.55 13.34 0.00 4.75
2011 2422 2.098280 AGGATCATCGAGACTGTCAACG 59.902 50.000 10.88 14.48 0.00 4.10
2091 2514 3.986006 GTCACAGGGACGGCGTCA 61.986 66.667 37.13 16.42 36.65 4.35
2214 2640 4.651867 GGCACCATCATGCTGACT 57.348 55.556 0.00 0.00 45.38 3.41
3089 3518 9.688592 ATTAAATTTGCTCTGTTTCTTCTCAAG 57.311 29.630 0.00 0.00 0.00 3.02
3115 3545 9.837525 GTACAAATATCTGTAGTATAGGAACCG 57.162 37.037 0.00 0.00 32.49 4.44
3117 3547 8.358148 ACAAATATCTGTAGTATAGGAACCGTG 58.642 37.037 0.00 0.00 0.00 4.94
3244 3676 1.351350 GTCCCAAGTCCTACCAGCTTT 59.649 52.381 0.00 0.00 0.00 3.51
3731 4166 7.807977 AAAATCCATATTACTTGTCGCTGAT 57.192 32.000 0.00 0.00 0.00 2.90
3791 4226 4.021894 ACTCTGTAATTGTCTTCTGCGACT 60.022 41.667 0.00 0.00 35.00 4.18
3838 4273 4.765273 ACACACAAGTAACATGTCTGTGA 58.235 39.130 25.09 0.41 35.22 3.58
3876 4311 0.336392 AAGGGCCCAAAGAGGATTCC 59.664 55.000 27.56 0.00 41.22 3.01
3965 4400 6.415798 TTTTTAAACAGGCAAAAGACTTGC 57.584 33.333 0.78 0.78 44.22 4.01
3975 4410 5.025986 GCAAAAGACTTGCCATTTCATTG 57.974 39.130 0.00 0.00 39.38 2.82
3976 4411 4.751098 GCAAAAGACTTGCCATTTCATTGA 59.249 37.500 0.00 0.00 39.38 2.57
3977 4412 5.410439 GCAAAAGACTTGCCATTTCATTGAT 59.590 36.000 0.00 0.00 39.38 2.57
3978 4413 6.072893 GCAAAAGACTTGCCATTTCATTGATT 60.073 34.615 0.00 0.00 39.38 2.57
3979 4414 7.118101 GCAAAAGACTTGCCATTTCATTGATTA 59.882 33.333 0.00 0.00 39.38 1.75
3980 4415 8.991026 CAAAAGACTTGCCATTTCATTGATTAA 58.009 29.630 0.00 0.00 0.00 1.40
3981 4416 8.767478 AAAGACTTGCCATTTCATTGATTAAG 57.233 30.769 0.00 0.00 0.00 1.85
3982 4417 7.707624 AGACTTGCCATTTCATTGATTAAGA 57.292 32.000 0.00 0.00 0.00 2.10
3983 4418 8.125978 AGACTTGCCATTTCATTGATTAAGAA 57.874 30.769 0.00 0.00 0.00 2.52
3984 4419 8.587608 AGACTTGCCATTTCATTGATTAAGAAA 58.412 29.630 0.00 0.00 35.92 2.52
3985 4420 9.206870 GACTTGCCATTTCATTGATTAAGAAAA 57.793 29.630 0.00 0.00 35.20 2.29
3986 4421 9.558396 ACTTGCCATTTCATTGATTAAGAAAAA 57.442 25.926 0.00 0.00 35.20 1.94
3988 4423 9.775854 TTGCCATTTCATTGATTAAGAAAAAGA 57.224 25.926 0.00 0.00 35.20 2.52
3989 4424 9.426837 TGCCATTTCATTGATTAAGAAAAAGAG 57.573 29.630 0.00 0.00 35.20 2.85
3990 4425 8.876790 GCCATTTCATTGATTAAGAAAAAGAGG 58.123 33.333 0.00 0.00 35.20 3.69
3997 4432 9.415544 CATTGATTAAGAAAAAGAGGAAACAGG 57.584 33.333 0.00 0.00 0.00 4.00
3998 4433 7.524717 TGATTAAGAAAAAGAGGAAACAGGG 57.475 36.000 0.00 0.00 0.00 4.45
3999 4434 7.066781 TGATTAAGAAAAAGAGGAAACAGGGT 58.933 34.615 0.00 0.00 0.00 4.34
4000 4435 6.954487 TTAAGAAAAAGAGGAAACAGGGTC 57.046 37.500 0.00 0.00 0.00 4.46
4001 4436 3.833732 AGAAAAAGAGGAAACAGGGTCC 58.166 45.455 0.00 0.00 35.17 4.46
4002 4437 2.271944 AAAAGAGGAAACAGGGTCCG 57.728 50.000 0.00 0.00 40.36 4.79
4003 4438 1.430992 AAAGAGGAAACAGGGTCCGA 58.569 50.000 0.00 0.00 40.36 4.55
4004 4439 1.430992 AAGAGGAAACAGGGTCCGAA 58.569 50.000 0.00 0.00 40.36 4.30
4005 4440 1.657804 AGAGGAAACAGGGTCCGAAT 58.342 50.000 0.00 0.00 40.36 3.34
4006 4441 2.829023 AGAGGAAACAGGGTCCGAATA 58.171 47.619 0.00 0.00 40.36 1.75
4007 4442 2.500504 AGAGGAAACAGGGTCCGAATAC 59.499 50.000 0.00 0.00 40.36 1.89
4008 4443 2.235402 GAGGAAACAGGGTCCGAATACA 59.765 50.000 0.00 0.00 40.36 2.29
4009 4444 2.236395 AGGAAACAGGGTCCGAATACAG 59.764 50.000 0.00 0.00 40.36 2.74
4010 4445 2.007608 GAAACAGGGTCCGAATACAGC 58.992 52.381 0.00 0.00 0.00 4.40
4011 4446 0.981183 AACAGGGTCCGAATACAGCA 59.019 50.000 0.00 0.00 0.00 4.41
4012 4447 0.537188 ACAGGGTCCGAATACAGCAG 59.463 55.000 0.00 0.00 0.00 4.24
4013 4448 0.811616 CAGGGTCCGAATACAGCAGC 60.812 60.000 0.00 0.00 0.00 5.25
4014 4449 1.523938 GGGTCCGAATACAGCAGCC 60.524 63.158 0.00 0.00 0.00 4.85
4015 4450 1.220749 GGTCCGAATACAGCAGCCA 59.779 57.895 0.00 0.00 0.00 4.75
4016 4451 1.090052 GGTCCGAATACAGCAGCCAC 61.090 60.000 0.00 0.00 0.00 5.01
4017 4452 0.391130 GTCCGAATACAGCAGCCACA 60.391 55.000 0.00 0.00 0.00 4.17
4018 4453 0.541392 TCCGAATACAGCAGCCACAT 59.459 50.000 0.00 0.00 0.00 3.21
4019 4454 1.760029 TCCGAATACAGCAGCCACATA 59.240 47.619 0.00 0.00 0.00 2.29
4020 4455 2.138320 CCGAATACAGCAGCCACATAG 58.862 52.381 0.00 0.00 0.00 2.23
4021 4456 2.483714 CCGAATACAGCAGCCACATAGT 60.484 50.000 0.00 0.00 0.00 2.12
4022 4457 2.541346 CGAATACAGCAGCCACATAGTG 59.459 50.000 0.00 0.00 0.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.364964 GCAGCAAACACGTAACAATAGCT 60.365 43.478 0.00 0.00 0.00 3.32
1 2 2.908626 GCAGCAAACACGTAACAATAGC 59.091 45.455 0.00 0.00 0.00 2.97
2 3 4.151070 CAGCAGCAAACACGTAACAATAG 58.849 43.478 0.00 0.00 0.00 1.73
3 4 3.562141 ACAGCAGCAAACACGTAACAATA 59.438 39.130 0.00 0.00 0.00 1.90
4 5 2.357637 ACAGCAGCAAACACGTAACAAT 59.642 40.909 0.00 0.00 0.00 2.71
5 6 1.740585 ACAGCAGCAAACACGTAACAA 59.259 42.857 0.00 0.00 0.00 2.83
6 7 1.374560 ACAGCAGCAAACACGTAACA 58.625 45.000 0.00 0.00 0.00 2.41
7 8 2.468532 AACAGCAGCAAACACGTAAC 57.531 45.000 0.00 0.00 0.00 2.50
8 9 3.608241 GCATAACAGCAGCAAACACGTAA 60.608 43.478 0.00 0.00 0.00 3.18
9 10 2.095969 GCATAACAGCAGCAAACACGTA 60.096 45.455 0.00 0.00 0.00 3.57
10 11 1.334960 GCATAACAGCAGCAAACACGT 60.335 47.619 0.00 0.00 0.00 4.49
11 12 1.330306 GCATAACAGCAGCAAACACG 58.670 50.000 0.00 0.00 0.00 4.49
12 13 2.420628 TGCATAACAGCAGCAAACAC 57.579 45.000 0.00 0.00 40.11 3.32
30 31 6.369005 CAAACTAGAAGAACAGCAAGACATG 58.631 40.000 0.00 0.00 0.00 3.21
31 32 5.049129 GCAAACTAGAAGAACAGCAAGACAT 60.049 40.000 0.00 0.00 0.00 3.06
32 33 4.273480 GCAAACTAGAAGAACAGCAAGACA 59.727 41.667 0.00 0.00 0.00 3.41
33 34 4.513318 AGCAAACTAGAAGAACAGCAAGAC 59.487 41.667 0.00 0.00 0.00 3.01
34 35 4.708177 AGCAAACTAGAAGAACAGCAAGA 58.292 39.130 0.00 0.00 0.00 3.02
47 48 7.199541 AGCATGCAATAATCTAGCAAACTAG 57.800 36.000 21.98 0.00 46.30 2.57
48 49 7.933577 ACTAGCATGCAATAATCTAGCAAACTA 59.066 33.333 21.98 0.00 42.15 2.24
49 50 6.769822 ACTAGCATGCAATAATCTAGCAAACT 59.230 34.615 21.98 0.00 42.15 2.66
50 51 6.963796 ACTAGCATGCAATAATCTAGCAAAC 58.036 36.000 21.98 0.00 42.15 2.93
51 52 8.853077 ATACTAGCATGCAATAATCTAGCAAA 57.147 30.769 21.98 1.19 42.15 3.68
52 53 8.316946 AGATACTAGCATGCAATAATCTAGCAA 58.683 33.333 21.98 3.56 42.15 3.91
53 54 7.845037 AGATACTAGCATGCAATAATCTAGCA 58.155 34.615 21.98 1.80 43.14 3.49
54 55 8.196771 AGAGATACTAGCATGCAATAATCTAGC 58.803 37.037 21.98 10.95 32.23 3.42
57 58 8.814931 AGAAGAGATACTAGCATGCAATAATCT 58.185 33.333 21.98 20.35 0.00 2.40
60 61 9.083422 ACTAGAAGAGATACTAGCATGCAATAA 57.917 33.333 21.98 2.60 39.47 1.40
61 62 8.642935 ACTAGAAGAGATACTAGCATGCAATA 57.357 34.615 21.98 9.23 39.47 1.90
62 63 7.232330 TGACTAGAAGAGATACTAGCATGCAAT 59.768 37.037 21.98 7.51 39.47 3.56
63 64 6.547510 TGACTAGAAGAGATACTAGCATGCAA 59.452 38.462 21.98 2.20 39.47 4.08
64 65 6.064717 TGACTAGAAGAGATACTAGCATGCA 58.935 40.000 21.98 5.01 39.47 3.96
65 66 6.567687 TGACTAGAAGAGATACTAGCATGC 57.432 41.667 10.51 10.51 39.47 4.06
66 67 8.334263 TCATGACTAGAAGAGATACTAGCATG 57.666 38.462 19.52 19.52 42.96 4.06
67 68 8.932434 TTCATGACTAGAAGAGATACTAGCAT 57.068 34.615 0.00 0.00 39.47 3.79
68 69 8.932434 ATTCATGACTAGAAGAGATACTAGCA 57.068 34.615 0.00 0.00 39.47 3.49
95 96 9.807649 GCAAGTTCATGATTAATTCCAGTAAAT 57.192 29.630 0.00 0.00 0.00 1.40
96 97 8.250332 GGCAAGTTCATGATTAATTCCAGTAAA 58.750 33.333 0.00 0.00 0.00 2.01
97 98 7.615365 AGGCAAGTTCATGATTAATTCCAGTAA 59.385 33.333 0.00 0.00 0.00 2.24
98 99 7.118723 AGGCAAGTTCATGATTAATTCCAGTA 58.881 34.615 0.00 0.00 0.00 2.74
99 100 5.954150 AGGCAAGTTCATGATTAATTCCAGT 59.046 36.000 0.00 0.00 0.00 4.00
100 101 6.461110 AGGCAAGTTCATGATTAATTCCAG 57.539 37.500 0.00 0.00 0.00 3.86
101 102 7.953005 TTAGGCAAGTTCATGATTAATTCCA 57.047 32.000 0.00 0.00 0.00 3.53
106 107 9.639563 TGGAATATTAGGCAAGTTCATGATTAA 57.360 29.630 0.00 0.00 0.00 1.40
107 108 9.639563 TTGGAATATTAGGCAAGTTCATGATTA 57.360 29.630 0.00 0.00 0.00 1.75
108 109 8.416329 GTTGGAATATTAGGCAAGTTCATGATT 58.584 33.333 0.00 0.00 0.00 2.57
109 110 7.560991 TGTTGGAATATTAGGCAAGTTCATGAT 59.439 33.333 0.00 0.00 0.00 2.45
110 111 6.889177 TGTTGGAATATTAGGCAAGTTCATGA 59.111 34.615 0.00 0.00 0.00 3.07
111 112 7.099266 TGTTGGAATATTAGGCAAGTTCATG 57.901 36.000 0.00 0.00 0.00 3.07
112 113 7.363793 GGTTGTTGGAATATTAGGCAAGTTCAT 60.364 37.037 0.00 0.00 0.00 2.57
113 114 6.071616 GGTTGTTGGAATATTAGGCAAGTTCA 60.072 38.462 0.00 0.00 0.00 3.18
114 115 6.330278 GGTTGTTGGAATATTAGGCAAGTTC 58.670 40.000 0.00 0.00 0.00 3.01
115 116 5.186992 GGGTTGTTGGAATATTAGGCAAGTT 59.813 40.000 0.00 0.00 0.00 2.66
116 117 4.709886 GGGTTGTTGGAATATTAGGCAAGT 59.290 41.667 0.00 0.00 0.00 3.16
117 118 4.709397 TGGGTTGTTGGAATATTAGGCAAG 59.291 41.667 0.00 0.00 0.00 4.01
118 119 4.678256 TGGGTTGTTGGAATATTAGGCAA 58.322 39.130 0.00 0.00 0.00 4.52
119 120 4.323569 TGGGTTGTTGGAATATTAGGCA 57.676 40.909 0.00 0.00 0.00 4.75
120 121 4.501400 GCATGGGTTGTTGGAATATTAGGC 60.501 45.833 0.00 0.00 0.00 3.93
121 122 4.648762 TGCATGGGTTGTTGGAATATTAGG 59.351 41.667 0.00 0.00 0.00 2.69
122 123 5.850557 TGCATGGGTTGTTGGAATATTAG 57.149 39.130 0.00 0.00 0.00 1.73
123 124 5.660417 ACATGCATGGGTTGTTGGAATATTA 59.340 36.000 29.41 0.00 0.00 0.98
124 125 4.470664 ACATGCATGGGTTGTTGGAATATT 59.529 37.500 29.41 0.48 0.00 1.28
125 126 4.032310 ACATGCATGGGTTGTTGGAATAT 58.968 39.130 29.41 1.17 0.00 1.28
126 127 3.439154 ACATGCATGGGTTGTTGGAATA 58.561 40.909 29.41 0.00 0.00 1.75
127 128 2.259012 ACATGCATGGGTTGTTGGAAT 58.741 42.857 29.41 1.84 0.00 3.01
128 129 1.714541 ACATGCATGGGTTGTTGGAA 58.285 45.000 29.41 0.00 0.00 3.53
129 130 2.166829 GTACATGCATGGGTTGTTGGA 58.833 47.619 29.41 0.00 0.00 3.53
130 131 1.891811 TGTACATGCATGGGTTGTTGG 59.108 47.619 29.41 2.41 0.00 3.77
131 132 3.872511 ATGTACATGCATGGGTTGTTG 57.127 42.857 29.41 4.81 0.00 3.33
132 133 5.067674 GTGATATGTACATGCATGGGTTGTT 59.932 40.000 29.41 10.82 0.00 2.83
133 134 4.580167 GTGATATGTACATGCATGGGTTGT 59.420 41.667 29.41 13.18 0.00 3.32
134 135 4.319694 CGTGATATGTACATGCATGGGTTG 60.320 45.833 29.41 7.20 0.00 3.77
135 136 3.814842 CGTGATATGTACATGCATGGGTT 59.185 43.478 29.41 12.30 0.00 4.11
260 262 2.288666 GATTGCACCTTGGCTTATCGA 58.711 47.619 0.00 0.00 34.04 3.59
275 277 3.508840 CGTGCTTCCCCCGATTGC 61.509 66.667 0.00 0.00 0.00 3.56
278 280 1.910580 ATGTTCGTGCTTCCCCCGAT 61.911 55.000 0.00 0.00 0.00 4.18
285 287 2.621338 TCTCCATGATGTTCGTGCTTC 58.379 47.619 0.00 0.00 32.19 3.86
292 294 1.143305 CGCGGATCTCCATGATGTTC 58.857 55.000 0.00 0.00 35.14 3.18
367 369 6.761312 TCAGTTCAATTTGGAAAGCATTGAT 58.239 32.000 0.00 0.00 34.21 2.57
600 942 6.888430 ACTCTTACGACAATACTTTTGCAAG 58.112 36.000 0.00 0.00 35.92 4.01
653 995 8.507249 CGATTTATTATCCCTTCATCAAACTCC 58.493 37.037 0.00 0.00 0.00 3.85
679 1021 2.159226 CCAGTACAACTCCGTCTCCATC 60.159 54.545 0.00 0.00 0.00 3.51
680 1022 1.825474 CCAGTACAACTCCGTCTCCAT 59.175 52.381 0.00 0.00 0.00 3.41
681 1023 1.254026 CCAGTACAACTCCGTCTCCA 58.746 55.000 0.00 0.00 0.00 3.86
682 1024 1.254954 ACCAGTACAACTCCGTCTCC 58.745 55.000 0.00 0.00 0.00 3.71
704 1046 3.647590 ACAACTCCGTCTACCCCTAAAAA 59.352 43.478 0.00 0.00 0.00 1.94
705 1047 3.242011 ACAACTCCGTCTACCCCTAAAA 58.758 45.455 0.00 0.00 0.00 1.52
706 1048 2.893424 ACAACTCCGTCTACCCCTAAA 58.107 47.619 0.00 0.00 0.00 1.85
707 1049 2.610438 ACAACTCCGTCTACCCCTAA 57.390 50.000 0.00 0.00 0.00 2.69
708 1050 2.578021 AGTACAACTCCGTCTACCCCTA 59.422 50.000 0.00 0.00 0.00 3.53
709 1051 1.357079 AGTACAACTCCGTCTACCCCT 59.643 52.381 0.00 0.00 0.00 4.79
710 1052 1.475682 CAGTACAACTCCGTCTACCCC 59.524 57.143 0.00 0.00 0.00 4.95
711 1053 1.475682 CCAGTACAACTCCGTCTACCC 59.524 57.143 0.00 0.00 0.00 3.69
712 1054 1.135170 GCCAGTACAACTCCGTCTACC 60.135 57.143 0.00 0.00 0.00 3.18
713 1055 1.467035 CGCCAGTACAACTCCGTCTAC 60.467 57.143 0.00 0.00 0.00 2.59
714 1056 0.806868 CGCCAGTACAACTCCGTCTA 59.193 55.000 0.00 0.00 0.00 2.59
715 1057 1.585006 CGCCAGTACAACTCCGTCT 59.415 57.895 0.00 0.00 0.00 4.18
716 1058 1.445582 CCGCCAGTACAACTCCGTC 60.446 63.158 0.00 0.00 0.00 4.79
717 1059 0.895100 TACCGCCAGTACAACTCCGT 60.895 55.000 0.00 0.00 0.00 4.69
718 1060 1.885157 TACCGCCAGTACAACTCCG 59.115 57.895 0.00 0.00 0.00 4.63
726 1068 2.090760 TGTATTCGTGTACCGCCAGTA 58.909 47.619 0.00 0.00 36.19 2.74
727 1069 0.889994 TGTATTCGTGTACCGCCAGT 59.110 50.000 0.00 0.00 36.19 4.00
728 1070 1.135199 ACTGTATTCGTGTACCGCCAG 60.135 52.381 0.00 0.00 36.19 4.85
729 1071 0.889994 ACTGTATTCGTGTACCGCCA 59.110 50.000 0.00 0.00 36.19 5.69
730 1072 2.159393 TGTACTGTATTCGTGTACCGCC 60.159 50.000 0.00 0.00 36.63 6.13
731 1073 2.848302 GTGTACTGTATTCGTGTACCGC 59.152 50.000 0.00 0.00 36.63 5.68
732 1074 3.093574 CGTGTACTGTATTCGTGTACCG 58.906 50.000 0.00 0.00 36.63 4.02
740 1082 1.133790 AGTCGGCCGTGTACTGTATTC 59.866 52.381 27.15 2.58 0.00 1.75
843 1219 6.739331 TGGTTTGAACTTTGGAATATTGGT 57.261 33.333 0.00 0.00 0.00 3.67
844 1220 7.497249 TGTTTGGTTTGAACTTTGGAATATTGG 59.503 33.333 0.00 0.00 0.00 3.16
871 1247 1.755959 TGCTTTGCTTTTTGCCTCTCA 59.244 42.857 0.00 0.00 42.00 3.27
913 1289 1.007038 TCGGAACTGTGTACGTGCC 60.007 57.895 0.00 0.00 0.00 5.01
1039 1423 1.645455 CCGCCGAAGCATCTTCATG 59.355 57.895 7.27 0.00 39.83 3.07
1959 2349 1.966451 CCACCTGGCGTTGAAGTCC 60.966 63.158 0.00 0.00 0.00 3.85
2214 2640 3.785859 GTCGCCAGGATGAGCCCA 61.786 66.667 0.00 0.00 39.69 5.36
3089 3518 9.837525 CGGTTCCTATACTACAGATATTTGTAC 57.162 37.037 2.07 0.00 32.56 2.90
3115 3545 8.841444 AATCAACAGATAAATCAATTACGCAC 57.159 30.769 0.00 0.00 0.00 5.34
3244 3676 5.163457 GGAATTGAGTTGGGTGTCTGAAAAA 60.163 40.000 0.00 0.00 0.00 1.94
3452 3886 5.239525 AGAGATTGTGTTCCACTAGCAAAAC 59.760 40.000 0.00 0.00 35.11 2.43
3731 4166 4.659088 GTCATGTGACGAATACTCTTCGA 58.341 43.478 13.65 0.00 43.97 3.71
3791 4226 7.991084 ACATATCGTGTACAAGGTAGCTATA 57.009 36.000 8.98 0.00 39.91 1.31
3838 4273 5.279456 GCCCTTCAAATATGTTTCCAGTGTT 60.279 40.000 0.00 0.00 0.00 3.32
3876 4311 6.593382 CACAGGAGGAGTTTAATCTTCTTCTG 59.407 42.308 21.76 21.76 46.80 3.02
3953 4388 4.751098 TCAATGAAATGGCAAGTCTTTTGC 59.249 37.500 3.39 3.39 44.22 3.68
3954 4389 7.429636 AATCAATGAAATGGCAAGTCTTTTG 57.570 32.000 0.00 1.55 0.00 2.44
3955 4390 9.211485 CTTAATCAATGAAATGGCAAGTCTTTT 57.789 29.630 0.00 0.00 0.00 2.27
3956 4391 8.587608 TCTTAATCAATGAAATGGCAAGTCTTT 58.412 29.630 0.00 0.00 0.00 2.52
3957 4392 8.125978 TCTTAATCAATGAAATGGCAAGTCTT 57.874 30.769 0.00 0.00 0.00 3.01
3958 4393 7.707624 TCTTAATCAATGAAATGGCAAGTCT 57.292 32.000 0.00 0.00 0.00 3.24
3959 4394 8.761575 TTTCTTAATCAATGAAATGGCAAGTC 57.238 30.769 0.00 0.00 0.00 3.01
3960 4395 9.558396 TTTTTCTTAATCAATGAAATGGCAAGT 57.442 25.926 0.00 0.00 31.08 3.16
3962 4397 9.775854 TCTTTTTCTTAATCAATGAAATGGCAA 57.224 25.926 0.00 0.00 31.08 4.52
3963 4398 9.426837 CTCTTTTTCTTAATCAATGAAATGGCA 57.573 29.630 0.00 0.00 31.08 4.92
3964 4399 8.876790 CCTCTTTTTCTTAATCAATGAAATGGC 58.123 33.333 0.00 0.00 31.08 4.40
3971 4406 9.415544 CCTGTTTCCTCTTTTTCTTAATCAATG 57.584 33.333 0.00 0.00 0.00 2.82
3972 4407 8.588472 CCCTGTTTCCTCTTTTTCTTAATCAAT 58.412 33.333 0.00 0.00 0.00 2.57
3973 4408 7.563556 ACCCTGTTTCCTCTTTTTCTTAATCAA 59.436 33.333 0.00 0.00 0.00 2.57
3974 4409 7.066781 ACCCTGTTTCCTCTTTTTCTTAATCA 58.933 34.615 0.00 0.00 0.00 2.57
3975 4410 7.309255 GGACCCTGTTTCCTCTTTTTCTTAATC 60.309 40.741 0.00 0.00 0.00 1.75
3976 4411 6.493802 GGACCCTGTTTCCTCTTTTTCTTAAT 59.506 38.462 0.00 0.00 0.00 1.40
3977 4412 5.831525 GGACCCTGTTTCCTCTTTTTCTTAA 59.168 40.000 0.00 0.00 0.00 1.85
3978 4413 5.382616 GGACCCTGTTTCCTCTTTTTCTTA 58.617 41.667 0.00 0.00 0.00 2.10
3979 4414 4.215908 GGACCCTGTTTCCTCTTTTTCTT 58.784 43.478 0.00 0.00 0.00 2.52
3980 4415 3.747708 CGGACCCTGTTTCCTCTTTTTCT 60.748 47.826 0.00 0.00 0.00 2.52
3981 4416 2.552743 CGGACCCTGTTTCCTCTTTTTC 59.447 50.000 0.00 0.00 0.00 2.29
3982 4417 2.173996 TCGGACCCTGTTTCCTCTTTTT 59.826 45.455 0.00 0.00 0.00 1.94
3983 4418 1.772453 TCGGACCCTGTTTCCTCTTTT 59.228 47.619 0.00 0.00 0.00 2.27
3984 4419 1.430992 TCGGACCCTGTTTCCTCTTT 58.569 50.000 0.00 0.00 0.00 2.52
3985 4420 1.430992 TTCGGACCCTGTTTCCTCTT 58.569 50.000 0.00 0.00 0.00 2.85
3986 4421 1.657804 ATTCGGACCCTGTTTCCTCT 58.342 50.000 0.00 0.00 0.00 3.69
3987 4422 2.235402 TGTATTCGGACCCTGTTTCCTC 59.765 50.000 0.00 0.00 0.00 3.71
3988 4423 2.236395 CTGTATTCGGACCCTGTTTCCT 59.764 50.000 0.00 0.00 0.00 3.36
3989 4424 2.629051 CTGTATTCGGACCCTGTTTCC 58.371 52.381 0.00 0.00 0.00 3.13
3990 4425 2.007608 GCTGTATTCGGACCCTGTTTC 58.992 52.381 0.00 0.00 0.00 2.78
3991 4426 1.349688 TGCTGTATTCGGACCCTGTTT 59.650 47.619 0.00 0.00 0.00 2.83
3992 4427 0.981183 TGCTGTATTCGGACCCTGTT 59.019 50.000 0.00 0.00 0.00 3.16
3993 4428 0.537188 CTGCTGTATTCGGACCCTGT 59.463 55.000 0.00 0.00 0.00 4.00
3994 4429 0.811616 GCTGCTGTATTCGGACCCTG 60.812 60.000 0.00 0.00 0.00 4.45
3995 4430 1.522569 GCTGCTGTATTCGGACCCT 59.477 57.895 0.00 0.00 0.00 4.34
3996 4431 1.523938 GGCTGCTGTATTCGGACCC 60.524 63.158 0.00 0.00 0.00 4.46
3997 4432 1.090052 GTGGCTGCTGTATTCGGACC 61.090 60.000 0.00 0.00 0.00 4.46
3998 4433 0.391130 TGTGGCTGCTGTATTCGGAC 60.391 55.000 0.00 0.00 0.00 4.79
3999 4434 0.541392 ATGTGGCTGCTGTATTCGGA 59.459 50.000 0.00 0.00 0.00 4.55
4000 4435 2.138320 CTATGTGGCTGCTGTATTCGG 58.862 52.381 0.00 0.00 0.00 4.30
4001 4436 2.541346 CACTATGTGGCTGCTGTATTCG 59.459 50.000 0.00 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.