Multiple sequence alignment - TraesCS5D01G093500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G093500 chr5D 100.000 5445 0 0 1 5445 102287970 102282526 0.000000e+00 10056.0
1 TraesCS5D01G093500 chr5D 87.037 108 6 6 728 834 528145961 528145861 1.240000e-21 115.0
2 TraesCS5D01G093500 chr5D 87.912 91 11 0 729 819 549872802 549872712 2.070000e-19 108.0
3 TraesCS5D01G093500 chr5A 97.420 3798 88 7 1212 5005 97226226 97230017 0.000000e+00 6462.0
4 TraesCS5D01G093500 chr5A 97.309 669 10 3 545 1212 97225515 97226176 0.000000e+00 1129.0
5 TraesCS5D01G093500 chr5A 93.238 281 17 1 36 314 97224602 97224882 3.920000e-111 412.0
6 TraesCS5D01G093500 chr5A 96.552 87 1 2 4903 4989 403704164 403704248 5.690000e-30 143.0
7 TraesCS5D01G093500 chr5B 97.254 3788 80 9 1212 4995 111909034 111905267 0.000000e+00 6397.0
8 TraesCS5D01G093500 chr5B 95.025 402 11 5 820 1214 111909481 111909082 1.670000e-174 623.0
9 TraesCS5D01G093500 chr5B 88.650 511 24 21 36 546 111910330 111909854 4.700000e-165 592.0
10 TraesCS5D01G093500 chr5B 89.091 440 42 5 5006 5441 527698917 527698480 4.800000e-150 542.0
11 TraesCS5D01G093500 chr5B 95.402 87 3 1 4910 4995 103322334 103322420 2.650000e-28 137.0
12 TraesCS5D01G093500 chr5B 95.402 87 2 1 4919 5005 337034980 337034896 2.650000e-28 137.0
13 TraesCS5D01G093500 chr5B 85.714 119 8 8 608 724 111909594 111909483 3.450000e-22 117.0
14 TraesCS5D01G093500 chr5B 90.323 93 3 2 727 819 440023833 440023747 3.450000e-22 117.0
15 TraesCS5D01G093500 chr5B 88.660 97 10 1 727 823 664951565 664951660 3.450000e-22 117.0
16 TraesCS5D01G093500 chr5B 89.888 89 6 1 736 824 30915938 30916023 1.600000e-20 111.0
17 TraesCS5D01G093500 chr5B 95.745 47 2 0 545 591 111909695 111909649 5.850000e-10 76.8
18 TraesCS5D01G093500 chr3D 98.000 350 7 0 5096 5445 500219419 500219768 4.660000e-170 608.0
19 TraesCS5D01G093500 chr3D 90.426 94 3 2 726 819 22679147 22679060 9.580000e-23 119.0
20 TraesCS5D01G093500 chr3D 90.426 94 3 2 726 819 22767811 22767898 9.580000e-23 119.0
21 TraesCS5D01G093500 chr3D 89.109 101 4 3 723 823 400683938 400684031 9.580000e-23 119.0
22 TraesCS5D01G093500 chr3D 87.629 97 5 3 727 823 79601587 79601498 7.460000e-19 106.0
23 TraesCS5D01G093500 chr3D 86.139 101 6 5 721 820 406162497 406162590 9.650000e-18 102.0
24 TraesCS5D01G093500 chr4D 88.341 446 46 6 5006 5445 58907565 58908010 1.040000e-146 531.0
25 TraesCS5D01G093500 chr4D 88.036 443 43 8 5006 5445 271732097 271732532 2.910000e-142 516.0
26 TraesCS5D01G093500 chr4D 90.323 93 3 2 727 819 469582270 469582356 3.450000e-22 117.0
27 TraesCS5D01G093500 chr4D 89.130 92 4 2 728 819 252173789 252173704 5.770000e-20 110.0
28 TraesCS5D01G093500 chr4D 89.011 91 4 2 729 819 346136150 346136066 2.070000e-19 108.0
29 TraesCS5D01G093500 chr2A 87.220 446 49 6 5006 5445 302996147 302995704 8.140000e-138 501.0
30 TraesCS5D01G093500 chr1D 86.966 445 51 6 5006 5444 443500476 443500033 1.360000e-135 494.0
31 TraesCS5D01G093500 chr1D 97.561 82 2 0 4913 4994 315607878 315607959 2.040000e-29 141.0
32 TraesCS5D01G093500 chr1D 88.000 100 5 3 727 825 318382792 318382885 1.600000e-20 111.0
33 TraesCS5D01G093500 chr1D 87.912 91 3 4 729 819 70496817 70496899 3.470000e-17 100.0
34 TraesCS5D01G093500 chr4A 86.667 450 45 10 5006 5445 360831249 360830805 8.200000e-133 484.0
35 TraesCS5D01G093500 chr3A 86.758 438 54 4 5006 5441 736324378 736324813 8.200000e-133 484.0
36 TraesCS5D01G093500 chr3A 91.753 97 6 2 4910 5005 655646772 655646677 3.420000e-27 134.0
37 TraesCS5D01G093500 chr7D 86.848 441 47 9 5006 5437 440435953 440435515 2.950000e-132 483.0
38 TraesCS5D01G093500 chr1B 97.590 83 2 0 4912 4994 427472153 427472235 5.690000e-30 143.0
39 TraesCS5D01G093500 chr1B 98.684 76 1 0 4919 4994 422514241 422514166 9.510000e-28 135.0
40 TraesCS5D01G093500 chr1B 84.404 109 11 6 728 836 230027773 230027875 9.650000e-18 102.0
41 TraesCS5D01G093500 chr7B 91.398 93 2 2 727 819 639796285 639796199 7.410000e-24 122.0
42 TraesCS5D01G093500 chr7B 88.542 96 5 4 729 819 64413009 64413103 1.600000e-20 111.0
43 TraesCS5D01G093500 chr7B 88.421 95 7 4 729 819 64413103 64413009 1.600000e-20 111.0
44 TraesCS5D01G093500 chr7B 85.849 106 8 4 714 819 663115804 663115902 7.460000e-19 106.0
45 TraesCS5D01G093500 chr6B 90.526 95 5 3 729 819 553059081 553058987 7.410000e-24 122.0
46 TraesCS5D01G093500 chr6B 88.889 99 5 2 727 825 281611875 281611967 3.450000e-22 117.0
47 TraesCS5D01G093500 chr6D 89.796 98 4 3 722 819 28032532 28032441 2.660000e-23 121.0
48 TraesCS5D01G093500 chr6D 89.130 92 4 2 728 819 9406777 9406692 5.770000e-20 110.0
49 TraesCS5D01G093500 chr6D 88.421 95 6 3 727 819 245495195 245495104 5.770000e-20 110.0
50 TraesCS5D01G093500 chr6D 89.130 92 4 2 728 819 299191348 299191263 5.770000e-20 110.0
51 TraesCS5D01G093500 chr6D 88.298 94 5 2 727 820 296699578 296699491 2.070000e-19 108.0
52 TraesCS5D01G093500 chr6D 86.813 91 6 3 729 819 11067939 11067855 4.490000e-16 97.1
53 TraesCS5D01G093500 chr1A 90.323 93 3 2 727 819 518662847 518662761 3.450000e-22 117.0
54 TraesCS5D01G093500 chr1A 91.463 82 4 3 740 819 321396750 321396830 5.770000e-20 110.0
55 TraesCS5D01G093500 chr7A 87.879 99 11 1 726 823 8774964 8775062 1.240000e-21 115.0
56 TraesCS5D01G093500 chr6A 85.849 106 12 1 721 826 435249371 435249473 5.770000e-20 110.0
57 TraesCS5D01G093500 chrUn 87.234 94 10 1 728 819 26701823 26701916 7.460000e-19 106.0
58 TraesCS5D01G093500 chrUn 85.455 110 7 5 723 830 83668109 83668007 7.460000e-19 106.0
59 TraesCS5D01G093500 chrUn 85.859 99 6 4 727 822 248895016 248894923 1.250000e-16 99.0
60 TraesCS5D01G093500 chrUn 86.667 90 6 2 737 826 36436899 36436982 1.610000e-15 95.3
61 TraesCS5D01G093500 chrUn 88.889 81 4 3 742 822 90492687 90492612 1.610000e-15 95.3
62 TraesCS5D01G093500 chrUn 85.263 95 9 5 727 819 46240433 46240342 5.810000e-15 93.5
63 TraesCS5D01G093500 chrUn 84.783 92 8 2 728 819 3346397 3346482 2.700000e-13 87.9
64 TraesCS5D01G093500 chrUn 84.615 91 8 3 729 819 92814967 92814883 9.720000e-13 86.1
65 TraesCS5D01G093500 chrUn 84.615 91 8 3 729 819 316007525 316007609 9.720000e-13 86.1
66 TraesCS5D01G093500 chrUn 82.418 91 10 3 729 819 67239869 67239953 2.100000e-09 75.0
67 TraesCS5D01G093500 chrUn 97.619 42 1 0 782 823 105371867 105371826 7.570000e-09 73.1
68 TraesCS5D01G093500 chrUn 86.111 72 3 4 752 823 24548265 24548201 2.720000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G093500 chr5D 102282526 102287970 5444 True 10056.000000 10056 100.0000 1 5445 1 chr5D.!!$R1 5444
1 TraesCS5D01G093500 chr5A 97224602 97230017 5415 False 2667.666667 6462 95.9890 36 5005 3 chr5A.!!$F2 4969
2 TraesCS5D01G093500 chr5B 111905267 111910330 5063 True 1561.160000 6397 92.4776 36 4995 5 chr5B.!!$R4 4959

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
29 30 0.034670 AAAGTCTCATGGGCCTCTGC 60.035 55.0 4.53 0.0 0.00 4.26 F
32 33 0.106819 GTCTCATGGGCCTCTGCATT 60.107 55.0 4.53 0.0 40.13 3.56 F
68 69 0.972983 CAAGCCCGGGAGAAGAGAGA 60.973 60.0 29.31 0.0 0.00 3.10 F
2247 2970 0.459237 CTTCCTCTAGCGGTGCAGTG 60.459 60.0 0.00 0.0 0.00 3.66 F
3069 3792 2.479275 GAGACTTACTGTTGTTTCCGGC 59.521 50.0 0.00 0.0 0.00 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1980 2703 1.376037 GCTACCAGAAGCCTTGCGT 60.376 57.895 0.00 0.0 36.45 5.24 R
2247 2970 2.600792 CGATTCTAATTTGCTCAGCGGC 60.601 50.000 0.00 0.0 0.00 6.53 R
2415 3138 0.904865 ATGCCTCGACACCAGAAGGA 60.905 55.000 0.00 0.0 38.69 3.36 R
3622 4346 1.271597 GGCTTGACCAACCACTCATCT 60.272 52.381 0.00 0.0 38.86 2.90 R
5389 6116 0.107165 GCTATTCTGCCGGGGAAACT 60.107 55.000 2.18 0.0 0.00 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.503895 AAAAGTCTCATGGGCCTCTG 57.496 50.000 4.53 2.30 0.00 3.35
29 30 0.034670 AAAGTCTCATGGGCCTCTGC 60.035 55.000 4.53 0.00 0.00 4.26
30 31 1.203441 AAGTCTCATGGGCCTCTGCA 61.203 55.000 4.53 0.00 40.13 4.41
31 32 0.987081 AGTCTCATGGGCCTCTGCAT 60.987 55.000 4.53 0.00 40.13 3.96
32 33 0.106819 GTCTCATGGGCCTCTGCATT 60.107 55.000 4.53 0.00 40.13 3.56
33 34 1.141657 GTCTCATGGGCCTCTGCATTA 59.858 52.381 4.53 0.00 40.13 1.90
34 35 1.141657 TCTCATGGGCCTCTGCATTAC 59.858 52.381 4.53 0.00 40.13 1.89
49 50 3.206964 GCATTACTGGGCTTCTAACTCC 58.793 50.000 0.00 0.00 0.00 3.85
68 69 0.972983 CAAGCCCGGGAGAAGAGAGA 60.973 60.000 29.31 0.00 0.00 3.10
69 70 0.973496 AAGCCCGGGAGAAGAGAGAC 60.973 60.000 29.31 1.00 0.00 3.36
70 71 1.380650 GCCCGGGAGAAGAGAGACT 60.381 63.158 29.31 0.00 0.00 3.24
79 80 4.142026 GGGAGAAGAGAGACTAAGAAAGGC 60.142 50.000 0.00 0.00 0.00 4.35
113 114 1.528309 CCTCTCCGGCTCTCTCTCC 60.528 68.421 0.00 0.00 0.00 3.71
114 115 1.531748 CTCTCCGGCTCTCTCTCCT 59.468 63.158 0.00 0.00 0.00 3.69
369 834 3.663995 TTTTCTTGCCATGTGATGTGG 57.336 42.857 0.00 0.00 39.80 4.17
370 835 2.291209 TTCTTGCCATGTGATGTGGT 57.709 45.000 0.00 0.00 39.01 4.16
371 836 3.431673 TTCTTGCCATGTGATGTGGTA 57.568 42.857 0.00 0.00 39.01 3.25
372 837 2.710377 TCTTGCCATGTGATGTGGTAC 58.290 47.619 0.00 0.00 39.01 3.34
373 838 2.305635 TCTTGCCATGTGATGTGGTACT 59.694 45.455 0.00 0.00 39.01 2.73
374 839 2.877097 TGCCATGTGATGTGGTACTT 57.123 45.000 0.00 0.00 39.01 2.24
375 840 3.153369 TGCCATGTGATGTGGTACTTT 57.847 42.857 0.00 0.00 39.01 2.66
376 841 3.495331 TGCCATGTGATGTGGTACTTTT 58.505 40.909 0.00 0.00 39.01 2.27
377 842 3.894427 TGCCATGTGATGTGGTACTTTTT 59.106 39.130 0.00 0.00 39.01 1.94
465 930 3.774842 TGATGGATTAGGGGCCTTTTT 57.225 42.857 0.84 0.00 0.00 1.94
487 952 6.841781 TTATTAACCCTGCCTAAAGGATCT 57.158 37.500 0.00 0.00 40.02 2.75
523 988 2.034053 TGGTTTGGTCGCAGATTTTCAC 59.966 45.455 0.00 0.00 40.67 3.18
591 1216 7.674471 AAAAAGGTCTCAGCTGTTAGTATTC 57.326 36.000 14.67 0.00 0.00 1.75
621 1285 7.495606 ACGAAATGCTTTTTCCTTCAAGAAAAT 59.504 29.630 0.00 0.00 43.35 1.82
622 1286 8.006027 CGAAATGCTTTTTCCTTCAAGAAAATC 58.994 33.333 0.00 0.00 43.35 2.17
623 1287 7.412137 AATGCTTTTTCCTTCAAGAAAATCG 57.588 32.000 0.71 0.00 43.35 3.34
624 1288 6.142818 TGCTTTTTCCTTCAAGAAAATCGA 57.857 33.333 0.71 0.00 43.35 3.59
625 1289 6.208644 TGCTTTTTCCTTCAAGAAAATCGAG 58.791 36.000 0.71 0.00 43.35 4.04
626 1290 6.039270 TGCTTTTTCCTTCAAGAAAATCGAGA 59.961 34.615 0.71 0.00 43.35 4.04
627 1291 6.580416 GCTTTTTCCTTCAAGAAAATCGAGAG 59.420 38.462 0.71 0.00 43.35 3.20
778 1443 5.805994 GCGTTTAGATCACTAAAGTAGCACT 59.194 40.000 0.00 0.00 45.42 4.40
906 1577 4.637483 ATCTTTATTTGTGTGCGATGGG 57.363 40.909 0.00 0.00 0.00 4.00
1325 2047 7.851822 AAGTTGTAATGTGTTTGCTATTTCG 57.148 32.000 0.00 0.00 0.00 3.46
1548 2270 3.753797 GTCCCAAGAAAACTAAGAGCCTG 59.246 47.826 0.00 0.00 0.00 4.85
1626 2348 4.242475 TGTGGCTAAAATGACTCTACACG 58.758 43.478 0.00 0.00 0.00 4.49
1839 2562 3.243301 CCGGCTCAATCCATCATTCAAAG 60.243 47.826 0.00 0.00 0.00 2.77
1980 2703 1.202722 GGTCCCGTTTTTCAGGAGTCA 60.203 52.381 0.00 0.00 0.00 3.41
2247 2970 0.459237 CTTCCTCTAGCGGTGCAGTG 60.459 60.000 0.00 0.00 0.00 3.66
2415 3138 6.373779 CGCAAAAGTCATCAGTACAAGAATT 58.626 36.000 0.00 0.00 0.00 2.17
2686 3409 7.500892 ACAAGTACTCGACTCTCTATGATTCAT 59.499 37.037 4.28 4.28 37.44 2.57
3069 3792 2.479275 GAGACTTACTGTTGTTTCCGGC 59.521 50.000 0.00 0.00 0.00 6.13
3141 3864 2.876079 GCATTCTCCGAACTCCCAGTTT 60.876 50.000 0.00 0.00 38.80 2.66
3593 4317 9.159364 TGTTCTTGACATATTCAGATTCAGAAG 57.841 33.333 0.00 0.00 34.94 2.85
3616 4340 5.124457 AGCGACATTTGAAGATATGCAACTT 59.876 36.000 0.00 0.00 0.00 2.66
3622 4346 7.177216 ACATTTGAAGATATGCAACTTGAGGAA 59.823 33.333 8.48 0.00 0.00 3.36
3769 4493 1.004862 TGGGTTGTTGAGACACCACAA 59.995 47.619 0.00 0.00 34.98 3.33
3916 4640 4.923281 GGTTCCTTGCACATTTATGTCAAC 59.077 41.667 0.00 0.00 39.39 3.18
4168 4892 1.752198 CTCCCTTGTCAACGGTCCA 59.248 57.895 1.17 0.00 0.00 4.02
4258 4982 1.804748 GCAAACGTTAGCTGCTACCTT 59.195 47.619 14.63 0.00 33.20 3.50
4261 4985 4.243270 CAAACGTTAGCTGCTACCTTAGT 58.757 43.478 9.27 2.73 0.00 2.24
4453 5177 5.895928 TCTATCAACGAATGACTTCTGGAG 58.104 41.667 0.00 0.00 41.93 3.86
4536 5263 6.849085 ATAGACATGGAAGTAGATAGCAGG 57.151 41.667 0.00 0.00 0.00 4.85
4647 5374 4.025647 GGAGCTCGTTGTAGTTCATATTGC 60.026 45.833 7.83 0.00 0.00 3.56
4809 5536 8.669243 CGAATAGGAATTTTGGCTATATTCTCC 58.331 37.037 10.62 0.00 0.00 3.71
4831 5558 3.615937 CGATGATCACTGTGGTCTTGAAG 59.384 47.826 20.73 6.08 0.00 3.02
4880 5607 6.806249 GCAGCTATACACTATCTTGATGTCTC 59.194 42.308 0.00 0.00 0.00 3.36
4889 5616 8.932610 ACACTATCTTGATGTCTCTTAATCCAT 58.067 33.333 0.00 0.00 0.00 3.41
5001 5728 2.774687 ACGGTGGGTGATTTAGTGAAC 58.225 47.619 0.00 0.00 0.00 3.18
5002 5729 2.370849 ACGGTGGGTGATTTAGTGAACT 59.629 45.455 0.00 0.00 0.00 3.01
5003 5730 3.181448 ACGGTGGGTGATTTAGTGAACTT 60.181 43.478 0.00 0.00 0.00 2.66
5005 5732 4.998672 CGGTGGGTGATTTAGTGAACTTTA 59.001 41.667 0.00 0.00 0.00 1.85
5006 5733 5.121768 CGGTGGGTGATTTAGTGAACTTTAG 59.878 44.000 0.00 0.00 0.00 1.85
5007 5734 6.002082 GGTGGGTGATTTAGTGAACTTTAGT 58.998 40.000 0.00 0.00 0.00 2.24
5008 5735 6.072673 GGTGGGTGATTTAGTGAACTTTAGTG 60.073 42.308 0.00 0.00 0.00 2.74
5009 5736 6.485648 GTGGGTGATTTAGTGAACTTTAGTGT 59.514 38.462 0.00 0.00 0.00 3.55
5010 5737 6.708949 TGGGTGATTTAGTGAACTTTAGTGTC 59.291 38.462 0.00 0.00 0.00 3.67
5011 5738 6.708949 GGGTGATTTAGTGAACTTTAGTGTCA 59.291 38.462 0.00 0.00 0.00 3.58
5012 5739 7.390718 GGGTGATTTAGTGAACTTTAGTGTCAT 59.609 37.037 0.00 0.00 0.00 3.06
5013 5740 8.230486 GGTGATTTAGTGAACTTTAGTGTCATG 58.770 37.037 0.00 0.00 0.00 3.07
5014 5741 8.774586 GTGATTTAGTGAACTTTAGTGTCATGT 58.225 33.333 0.00 0.00 0.00 3.21
5015 5742 9.990360 TGATTTAGTGAACTTTAGTGTCATGTA 57.010 29.630 0.00 0.00 0.00 2.29
5017 5744 9.998106 ATTTAGTGAACTTTAGTGTCATGTAGT 57.002 29.630 0.00 0.00 0.00 2.73
5018 5745 9.472361 TTTAGTGAACTTTAGTGTCATGTAGTC 57.528 33.333 0.00 0.00 0.00 2.59
5019 5746 7.050970 AGTGAACTTTAGTGTCATGTAGTCA 57.949 36.000 0.00 0.00 0.00 3.41
5020 5747 7.497595 AGTGAACTTTAGTGTCATGTAGTCAA 58.502 34.615 0.00 0.00 0.00 3.18
5021 5748 7.438459 AGTGAACTTTAGTGTCATGTAGTCAAC 59.562 37.037 0.00 0.00 0.00 3.18
5022 5749 7.223971 GTGAACTTTAGTGTCATGTAGTCAACA 59.776 37.037 0.00 0.00 43.86 3.33
5035 5762 6.795098 TGTAGTCAACATTCACATAACACC 57.205 37.500 0.00 0.00 31.43 4.16
5036 5763 6.292150 TGTAGTCAACATTCACATAACACCA 58.708 36.000 0.00 0.00 31.43 4.17
5037 5764 5.689383 AGTCAACATTCACATAACACCAC 57.311 39.130 0.00 0.00 0.00 4.16
5038 5765 5.376625 AGTCAACATTCACATAACACCACT 58.623 37.500 0.00 0.00 0.00 4.00
5039 5766 6.530120 AGTCAACATTCACATAACACCACTA 58.470 36.000 0.00 0.00 0.00 2.74
5040 5767 6.426937 AGTCAACATTCACATAACACCACTAC 59.573 38.462 0.00 0.00 0.00 2.73
5041 5768 6.203915 GTCAACATTCACATAACACCACTACA 59.796 38.462 0.00 0.00 0.00 2.74
5042 5769 6.426633 TCAACATTCACATAACACCACTACAG 59.573 38.462 0.00 0.00 0.00 2.74
5043 5770 5.245531 ACATTCACATAACACCACTACAGG 58.754 41.667 0.00 0.00 0.00 4.00
5044 5771 5.012664 ACATTCACATAACACCACTACAGGA 59.987 40.000 0.00 0.00 0.00 3.86
5045 5772 5.554437 TTCACATAACACCACTACAGGAA 57.446 39.130 0.00 0.00 0.00 3.36
5046 5773 5.554437 TCACATAACACCACTACAGGAAA 57.446 39.130 0.00 0.00 0.00 3.13
5047 5774 5.547465 TCACATAACACCACTACAGGAAAG 58.453 41.667 0.00 0.00 0.00 2.62
5048 5775 5.305902 TCACATAACACCACTACAGGAAAGA 59.694 40.000 0.00 0.00 0.00 2.52
5049 5776 5.408604 CACATAACACCACTACAGGAAAGAC 59.591 44.000 0.00 0.00 0.00 3.01
5050 5777 5.071250 ACATAACACCACTACAGGAAAGACA 59.929 40.000 0.00 0.00 0.00 3.41
5051 5778 4.497291 AACACCACTACAGGAAAGACAA 57.503 40.909 0.00 0.00 0.00 3.18
5052 5779 3.805207 ACACCACTACAGGAAAGACAAC 58.195 45.455 0.00 0.00 0.00 3.32
5053 5780 3.199071 ACACCACTACAGGAAAGACAACA 59.801 43.478 0.00 0.00 0.00 3.33
5054 5781 4.141482 ACACCACTACAGGAAAGACAACAT 60.141 41.667 0.00 0.00 0.00 2.71
5055 5782 5.071250 ACACCACTACAGGAAAGACAACATA 59.929 40.000 0.00 0.00 0.00 2.29
5056 5783 5.408604 CACCACTACAGGAAAGACAACATAC 59.591 44.000 0.00 0.00 0.00 2.39
5057 5784 5.071250 ACCACTACAGGAAAGACAACATACA 59.929 40.000 0.00 0.00 0.00 2.29
5058 5785 6.173339 CCACTACAGGAAAGACAACATACAT 58.827 40.000 0.00 0.00 0.00 2.29
5059 5786 6.313905 CCACTACAGGAAAGACAACATACATC 59.686 42.308 0.00 0.00 0.00 3.06
5060 5787 7.099764 CACTACAGGAAAGACAACATACATCT 58.900 38.462 0.00 0.00 0.00 2.90
5061 5788 7.276658 CACTACAGGAAAGACAACATACATCTC 59.723 40.741 0.00 0.00 0.00 2.75
5062 5789 6.114187 ACAGGAAAGACAACATACATCTCA 57.886 37.500 0.00 0.00 0.00 3.27
5063 5790 6.715280 ACAGGAAAGACAACATACATCTCAT 58.285 36.000 0.00 0.00 0.00 2.90
5064 5791 6.820656 ACAGGAAAGACAACATACATCTCATC 59.179 38.462 0.00 0.00 0.00 2.92
5065 5792 6.820152 CAGGAAAGACAACATACATCTCATCA 59.180 38.462 0.00 0.00 0.00 3.07
5066 5793 7.335171 CAGGAAAGACAACATACATCTCATCAA 59.665 37.037 0.00 0.00 0.00 2.57
5067 5794 7.884877 AGGAAAGACAACATACATCTCATCAAA 59.115 33.333 0.00 0.00 0.00 2.69
5068 5795 8.514594 GGAAAGACAACATACATCTCATCAAAA 58.485 33.333 0.00 0.00 0.00 2.44
5073 5800 9.803130 GACAACATACATCTCATCAAAATATCG 57.197 33.333 0.00 0.00 0.00 2.92
5074 5801 9.546428 ACAACATACATCTCATCAAAATATCGA 57.454 29.630 0.00 0.00 0.00 3.59
5077 5804 8.703336 ACATACATCTCATCAAAATATCGAACG 58.297 33.333 0.00 0.00 0.00 3.95
5078 5805 8.915654 CATACATCTCATCAAAATATCGAACGA 58.084 33.333 0.00 0.00 0.00 3.85
5079 5806 7.770801 ACATCTCATCAAAATATCGAACGAA 57.229 32.000 0.12 0.00 0.00 3.85
5080 5807 8.370493 ACATCTCATCAAAATATCGAACGAAT 57.630 30.769 0.12 0.00 0.00 3.34
5081 5808 9.476202 ACATCTCATCAAAATATCGAACGAATA 57.524 29.630 0.12 0.00 0.00 1.75
5082 5809 9.732893 CATCTCATCAAAATATCGAACGAATAC 57.267 33.333 0.12 0.00 0.00 1.89
5083 5810 8.294341 TCTCATCAAAATATCGAACGAATACC 57.706 34.615 0.12 0.00 0.00 2.73
5084 5811 7.923878 TCTCATCAAAATATCGAACGAATACCA 59.076 33.333 0.12 0.00 0.00 3.25
5085 5812 8.426881 TCATCAAAATATCGAACGAATACCAA 57.573 30.769 0.12 0.00 0.00 3.67
5086 5813 8.884726 TCATCAAAATATCGAACGAATACCAAA 58.115 29.630 0.12 0.00 0.00 3.28
5087 5814 9.663904 CATCAAAATATCGAACGAATACCAAAT 57.336 29.630 0.12 0.00 0.00 2.32
5089 5816 9.710979 TCAAAATATCGAACGAATACCAAATTC 57.289 29.630 0.12 0.00 0.00 2.17
5090 5817 9.497030 CAAAATATCGAACGAATACCAAATTCA 57.503 29.630 0.12 0.00 0.00 2.57
5091 5818 9.498307 AAAATATCGAACGAATACCAAATTCAC 57.502 29.630 0.12 0.00 0.00 3.18
5092 5819 7.780008 ATATCGAACGAATACCAAATTCACA 57.220 32.000 0.12 0.00 0.00 3.58
5093 5820 6.677781 ATCGAACGAATACCAAATTCACAT 57.322 33.333 0.12 0.00 0.00 3.21
5094 5821 5.863898 TCGAACGAATACCAAATTCACATG 58.136 37.500 0.00 0.00 0.00 3.21
5095 5822 5.639931 TCGAACGAATACCAAATTCACATGA 59.360 36.000 0.00 0.00 0.00 3.07
5096 5823 6.315144 TCGAACGAATACCAAATTCACATGAT 59.685 34.615 0.00 0.00 0.00 2.45
5097 5824 6.966632 CGAACGAATACCAAATTCACATGATT 59.033 34.615 0.00 0.00 0.00 2.57
5098 5825 8.119845 CGAACGAATACCAAATTCACATGATTA 58.880 33.333 0.00 0.00 0.00 1.75
5099 5826 9.221775 GAACGAATACCAAATTCACATGATTAC 57.778 33.333 0.00 0.00 0.00 1.89
5100 5827 8.506168 ACGAATACCAAATTCACATGATTACT 57.494 30.769 0.00 0.00 0.00 2.24
5101 5828 8.956426 ACGAATACCAAATTCACATGATTACTT 58.044 29.630 0.00 0.00 0.00 2.24
5107 5834 9.912634 ACCAAATTCACATGATTACTTACAAAG 57.087 29.630 0.00 0.00 0.00 2.77
5108 5835 8.863049 CCAAATTCACATGATTACTTACAAAGC 58.137 33.333 0.00 0.00 0.00 3.51
5109 5836 9.409312 CAAATTCACATGATTACTTACAAAGCA 57.591 29.630 0.00 0.00 0.00 3.91
5122 5849 9.891828 TTACTTACAAAGCATGTTTATGTTCAG 57.108 29.630 12.57 11.58 43.63 3.02
5123 5850 7.370383 ACTTACAAAGCATGTTTATGTTCAGG 58.630 34.615 12.57 3.45 43.63 3.86
5124 5851 7.230510 ACTTACAAAGCATGTTTATGTTCAGGA 59.769 33.333 12.57 0.00 43.63 3.86
5125 5852 6.594788 ACAAAGCATGTTTATGTTCAGGAT 57.405 33.333 0.00 0.00 40.06 3.24
5126 5853 6.624423 ACAAAGCATGTTTATGTTCAGGATC 58.376 36.000 0.00 0.00 40.06 3.36
5127 5854 6.209192 ACAAAGCATGTTTATGTTCAGGATCA 59.791 34.615 0.00 0.00 40.06 2.92
5128 5855 6.446781 AAGCATGTTTATGTTCAGGATCAG 57.553 37.500 0.00 0.00 36.65 2.90
5129 5856 5.748402 AGCATGTTTATGTTCAGGATCAGA 58.252 37.500 0.00 0.00 36.65 3.27
5130 5857 5.821470 AGCATGTTTATGTTCAGGATCAGAG 59.179 40.000 0.00 0.00 36.65 3.35
5131 5858 5.008415 GCATGTTTATGTTCAGGATCAGAGG 59.992 44.000 0.00 0.00 36.65 3.69
5132 5859 5.102953 TGTTTATGTTCAGGATCAGAGGG 57.897 43.478 0.00 0.00 0.00 4.30
5133 5860 4.080356 TGTTTATGTTCAGGATCAGAGGGG 60.080 45.833 0.00 0.00 0.00 4.79
5134 5861 2.277008 ATGTTCAGGATCAGAGGGGT 57.723 50.000 0.00 0.00 0.00 4.95
5135 5862 2.940514 TGTTCAGGATCAGAGGGGTA 57.059 50.000 0.00 0.00 0.00 3.69
5136 5863 3.421394 TGTTCAGGATCAGAGGGGTAT 57.579 47.619 0.00 0.00 0.00 2.73
5137 5864 3.736094 TGTTCAGGATCAGAGGGGTATT 58.264 45.455 0.00 0.00 0.00 1.89
5138 5865 3.455910 TGTTCAGGATCAGAGGGGTATTG 59.544 47.826 0.00 0.00 0.00 1.90
5139 5866 3.706389 TCAGGATCAGAGGGGTATTGA 57.294 47.619 0.00 0.00 0.00 2.57
5140 5867 4.007581 TCAGGATCAGAGGGGTATTGAA 57.992 45.455 0.00 0.00 0.00 2.69
5141 5868 4.570926 TCAGGATCAGAGGGGTATTGAAT 58.429 43.478 0.00 0.00 0.00 2.57
5142 5869 5.726560 TCAGGATCAGAGGGGTATTGAATA 58.273 41.667 0.00 0.00 0.00 1.75
5143 5870 6.334296 TCAGGATCAGAGGGGTATTGAATAT 58.666 40.000 0.00 0.00 0.00 1.28
5144 5871 6.441924 TCAGGATCAGAGGGGTATTGAATATC 59.558 42.308 0.00 0.00 0.00 1.63
5145 5872 6.214208 CAGGATCAGAGGGGTATTGAATATCA 59.786 42.308 0.00 0.00 0.00 2.15
5146 5873 6.970640 AGGATCAGAGGGGTATTGAATATCAT 59.029 38.462 0.00 0.00 0.00 2.45
5147 5874 7.463618 AGGATCAGAGGGGTATTGAATATCATT 59.536 37.037 0.00 0.00 0.00 2.57
5148 5875 8.772250 GGATCAGAGGGGTATTGAATATCATTA 58.228 37.037 0.00 0.00 0.00 1.90
5151 5878 8.605947 TCAGAGGGGTATTGAATATCATTAAGG 58.394 37.037 0.00 0.00 0.00 2.69
5152 5879 8.605947 CAGAGGGGTATTGAATATCATTAAGGA 58.394 37.037 0.00 0.00 0.00 3.36
5153 5880 9.356649 AGAGGGGTATTGAATATCATTAAGGAT 57.643 33.333 7.86 7.86 0.00 3.24
5154 5881 9.620259 GAGGGGTATTGAATATCATTAAGGATC 57.380 37.037 5.78 0.00 0.00 3.36
5155 5882 9.356649 AGGGGTATTGAATATCATTAAGGATCT 57.643 33.333 5.78 0.00 0.00 2.75
5156 5883 9.401058 GGGGTATTGAATATCATTAAGGATCTG 57.599 37.037 5.78 0.00 0.00 2.90
5167 5894 7.797038 TCATTAAGGATCTGAACATGTGATG 57.203 36.000 0.00 0.00 0.00 3.07
5181 5908 6.662865 ACATGTGATGTTCCACCAAATAAA 57.337 33.333 0.00 0.00 41.63 1.40
5182 5909 6.454795 ACATGTGATGTTCCACCAAATAAAC 58.545 36.000 0.00 0.00 41.63 2.01
5183 5910 5.461032 TGTGATGTTCCACCAAATAAACC 57.539 39.130 0.00 0.00 36.26 3.27
5184 5911 4.895889 TGTGATGTTCCACCAAATAAACCA 59.104 37.500 0.00 0.00 36.26 3.67
5185 5912 5.363868 TGTGATGTTCCACCAAATAAACCAA 59.636 36.000 0.00 0.00 36.26 3.67
5186 5913 5.694458 GTGATGTTCCACCAAATAAACCAAC 59.306 40.000 0.00 0.00 0.00 3.77
5187 5914 5.600484 TGATGTTCCACCAAATAAACCAACT 59.400 36.000 0.00 0.00 0.00 3.16
5188 5915 6.778069 TGATGTTCCACCAAATAAACCAACTA 59.222 34.615 0.00 0.00 0.00 2.24
5189 5916 6.642707 TGTTCCACCAAATAAACCAACTAG 57.357 37.500 0.00 0.00 0.00 2.57
5190 5917 5.010213 TGTTCCACCAAATAAACCAACTAGC 59.990 40.000 0.00 0.00 0.00 3.42
5191 5918 4.730966 TCCACCAAATAAACCAACTAGCA 58.269 39.130 0.00 0.00 0.00 3.49
5192 5919 5.329399 TCCACCAAATAAACCAACTAGCAT 58.671 37.500 0.00 0.00 0.00 3.79
5193 5920 5.417580 TCCACCAAATAAACCAACTAGCATC 59.582 40.000 0.00 0.00 0.00 3.91
5194 5921 5.184864 CCACCAAATAAACCAACTAGCATCA 59.815 40.000 0.00 0.00 0.00 3.07
5195 5922 6.295011 CCACCAAATAAACCAACTAGCATCAA 60.295 38.462 0.00 0.00 0.00 2.57
5196 5923 6.586082 CACCAAATAAACCAACTAGCATCAAC 59.414 38.462 0.00 0.00 0.00 3.18
5197 5924 6.493458 ACCAAATAAACCAACTAGCATCAACT 59.507 34.615 0.00 0.00 0.00 3.16
5198 5925 7.029563 CCAAATAAACCAACTAGCATCAACTC 58.970 38.462 0.00 0.00 0.00 3.01
5199 5926 6.759497 AATAAACCAACTAGCATCAACTCC 57.241 37.500 0.00 0.00 0.00 3.85
5200 5927 3.788227 AACCAACTAGCATCAACTCCA 57.212 42.857 0.00 0.00 0.00 3.86
5201 5928 3.788227 ACCAACTAGCATCAACTCCAA 57.212 42.857 0.00 0.00 0.00 3.53
5202 5929 3.679389 ACCAACTAGCATCAACTCCAAG 58.321 45.455 0.00 0.00 0.00 3.61
5203 5930 3.012518 CCAACTAGCATCAACTCCAAGG 58.987 50.000 0.00 0.00 0.00 3.61
5204 5931 3.307691 CCAACTAGCATCAACTCCAAGGA 60.308 47.826 0.00 0.00 0.00 3.36
5205 5932 3.902881 ACTAGCATCAACTCCAAGGAG 57.097 47.619 14.44 14.44 46.91 3.69
5219 5946 6.287589 CTCCAAGGAGTAATCAACACTACT 57.712 41.667 7.98 0.00 38.93 2.57
5220 5947 7.406031 CTCCAAGGAGTAATCAACACTACTA 57.594 40.000 7.98 0.00 36.10 1.82
5221 5948 7.406031 TCCAAGGAGTAATCAACACTACTAG 57.594 40.000 0.00 0.00 36.10 2.57
5222 5949 6.043411 CCAAGGAGTAATCAACACTACTAGC 58.957 44.000 0.00 0.00 36.10 3.42
5223 5950 6.351033 CCAAGGAGTAATCAACACTACTAGCA 60.351 42.308 0.00 0.00 36.10 3.49
5224 5951 6.852420 AGGAGTAATCAACACTACTAGCAA 57.148 37.500 0.00 0.00 35.34 3.91
5225 5952 6.631962 AGGAGTAATCAACACTACTAGCAAC 58.368 40.000 0.00 0.00 35.34 4.17
5226 5953 5.811100 GGAGTAATCAACACTACTAGCAACC 59.189 44.000 0.00 0.00 0.00 3.77
5227 5954 5.731591 AGTAATCAACACTACTAGCAACCC 58.268 41.667 0.00 0.00 0.00 4.11
5228 5955 4.634012 AATCAACACTACTAGCAACCCA 57.366 40.909 0.00 0.00 0.00 4.51
5229 5956 3.396260 TCAACACTACTAGCAACCCAC 57.604 47.619 0.00 0.00 0.00 4.61
5230 5957 2.701423 TCAACACTACTAGCAACCCACA 59.299 45.455 0.00 0.00 0.00 4.17
5231 5958 3.067106 CAACACTACTAGCAACCCACAG 58.933 50.000 0.00 0.00 0.00 3.66
5232 5959 1.623811 ACACTACTAGCAACCCACAGG 59.376 52.381 0.00 0.00 40.04 4.00
5245 5972 2.851195 CCCACAGGTACCAATATGAGC 58.149 52.381 15.94 0.00 0.00 4.26
5246 5973 2.439507 CCCACAGGTACCAATATGAGCT 59.560 50.000 15.94 0.00 0.00 4.09
5247 5974 3.117888 CCCACAGGTACCAATATGAGCTT 60.118 47.826 15.94 0.00 0.00 3.74
5248 5975 4.526970 CCACAGGTACCAATATGAGCTTT 58.473 43.478 15.94 0.00 0.00 3.51
5249 5976 4.336433 CCACAGGTACCAATATGAGCTTTG 59.664 45.833 15.94 1.01 0.00 2.77
5250 5977 4.336433 CACAGGTACCAATATGAGCTTTGG 59.664 45.833 15.94 12.45 46.37 3.28
5251 5978 3.885297 CAGGTACCAATATGAGCTTTGGG 59.115 47.826 15.94 3.60 45.45 4.12
5252 5979 3.785887 AGGTACCAATATGAGCTTTGGGA 59.214 43.478 15.94 7.69 45.45 4.37
5254 5981 3.737559 ACCAATATGAGCTTTGGGACA 57.262 42.857 17.21 0.00 45.45 4.02
5269 5996 4.916983 TGGGACAAAGATTGAACACAAG 57.083 40.909 0.00 0.00 31.92 3.16
5270 5997 4.531854 TGGGACAAAGATTGAACACAAGA 58.468 39.130 0.00 0.00 31.92 3.02
5271 5998 4.580167 TGGGACAAAGATTGAACACAAGAG 59.420 41.667 0.00 0.00 31.92 2.85
5272 5999 4.821805 GGGACAAAGATTGAACACAAGAGA 59.178 41.667 0.00 0.00 0.00 3.10
5273 6000 5.474876 GGGACAAAGATTGAACACAAGAGAT 59.525 40.000 0.00 0.00 0.00 2.75
5274 6001 6.376978 GGACAAAGATTGAACACAAGAGATG 58.623 40.000 0.00 0.00 0.00 2.90
5275 6002 6.205464 GGACAAAGATTGAACACAAGAGATGA 59.795 38.462 0.00 0.00 0.00 2.92
5276 6003 7.255242 GGACAAAGATTGAACACAAGAGATGAA 60.255 37.037 0.00 0.00 0.00 2.57
5277 6004 7.420800 ACAAAGATTGAACACAAGAGATGAAC 58.579 34.615 0.00 0.00 0.00 3.18
5278 6005 7.284034 ACAAAGATTGAACACAAGAGATGAACT 59.716 33.333 0.00 0.00 0.00 3.01
5279 6006 8.777413 CAAAGATTGAACACAAGAGATGAACTA 58.223 33.333 0.00 0.00 0.00 2.24
5280 6007 8.545229 AAGATTGAACACAAGAGATGAACTAG 57.455 34.615 0.00 0.00 0.00 2.57
5281 6008 7.102346 AGATTGAACACAAGAGATGAACTAGG 58.898 38.462 0.00 0.00 0.00 3.02
5282 6009 5.152623 TGAACACAAGAGATGAACTAGGG 57.847 43.478 0.00 0.00 0.00 3.53
5283 6010 4.593206 TGAACACAAGAGATGAACTAGGGT 59.407 41.667 0.00 0.00 0.00 4.34
5284 6011 5.071788 TGAACACAAGAGATGAACTAGGGTT 59.928 40.000 0.00 0.00 38.52 4.11
5285 6012 5.568620 ACACAAGAGATGAACTAGGGTTT 57.431 39.130 0.00 0.00 35.58 3.27
5286 6013 5.308825 ACACAAGAGATGAACTAGGGTTTG 58.691 41.667 0.00 0.00 35.58 2.93
5287 6014 5.071788 ACACAAGAGATGAACTAGGGTTTGA 59.928 40.000 0.00 0.00 35.58 2.69
5288 6015 5.641209 CACAAGAGATGAACTAGGGTTTGAG 59.359 44.000 0.00 0.00 35.58 3.02
5289 6016 5.544176 ACAAGAGATGAACTAGGGTTTGAGA 59.456 40.000 0.00 0.00 35.58 3.27
5290 6017 5.930837 AGAGATGAACTAGGGTTTGAGAG 57.069 43.478 0.00 0.00 35.58 3.20
5291 6018 4.714308 AGAGATGAACTAGGGTTTGAGAGG 59.286 45.833 0.00 0.00 35.58 3.69
5292 6019 4.689062 AGATGAACTAGGGTTTGAGAGGA 58.311 43.478 0.00 0.00 35.58 3.71
5293 6020 4.714308 AGATGAACTAGGGTTTGAGAGGAG 59.286 45.833 0.00 0.00 35.58 3.69
5294 6021 4.127918 TGAACTAGGGTTTGAGAGGAGA 57.872 45.455 0.00 0.00 35.58 3.71
5295 6022 4.689062 TGAACTAGGGTTTGAGAGGAGAT 58.311 43.478 0.00 0.00 35.58 2.75
5296 6023 4.467795 TGAACTAGGGTTTGAGAGGAGATG 59.532 45.833 0.00 0.00 35.58 2.90
5297 6024 3.379452 ACTAGGGTTTGAGAGGAGATGG 58.621 50.000 0.00 0.00 0.00 3.51
5298 6025 2.350863 AGGGTTTGAGAGGAGATGGT 57.649 50.000 0.00 0.00 0.00 3.55
5299 6026 1.912043 AGGGTTTGAGAGGAGATGGTG 59.088 52.381 0.00 0.00 0.00 4.17
5300 6027 1.630878 GGGTTTGAGAGGAGATGGTGT 59.369 52.381 0.00 0.00 0.00 4.16
5301 6028 2.040412 GGGTTTGAGAGGAGATGGTGTT 59.960 50.000 0.00 0.00 0.00 3.32
5302 6029 3.077359 GGTTTGAGAGGAGATGGTGTTG 58.923 50.000 0.00 0.00 0.00 3.33
5303 6030 3.077359 GTTTGAGAGGAGATGGTGTTGG 58.923 50.000 0.00 0.00 0.00 3.77
5304 6031 2.030027 TGAGAGGAGATGGTGTTGGT 57.970 50.000 0.00 0.00 0.00 3.67
5305 6032 2.338809 TGAGAGGAGATGGTGTTGGTT 58.661 47.619 0.00 0.00 0.00 3.67
5306 6033 2.038952 TGAGAGGAGATGGTGTTGGTTG 59.961 50.000 0.00 0.00 0.00 3.77
5307 6034 2.303022 GAGAGGAGATGGTGTTGGTTGA 59.697 50.000 0.00 0.00 0.00 3.18
5308 6035 2.915604 AGAGGAGATGGTGTTGGTTGAT 59.084 45.455 0.00 0.00 0.00 2.57
5309 6036 4.104086 AGAGGAGATGGTGTTGGTTGATA 58.896 43.478 0.00 0.00 0.00 2.15
5310 6037 4.723789 AGAGGAGATGGTGTTGGTTGATAT 59.276 41.667 0.00 0.00 0.00 1.63
5311 6038 4.785301 AGGAGATGGTGTTGGTTGATATG 58.215 43.478 0.00 0.00 0.00 1.78
5312 6039 4.228210 AGGAGATGGTGTTGGTTGATATGT 59.772 41.667 0.00 0.00 0.00 2.29
5313 6040 4.949856 GGAGATGGTGTTGGTTGATATGTT 59.050 41.667 0.00 0.00 0.00 2.71
5314 6041 5.163622 GGAGATGGTGTTGGTTGATATGTTG 60.164 44.000 0.00 0.00 0.00 3.33
5315 6042 5.569355 AGATGGTGTTGGTTGATATGTTGA 58.431 37.500 0.00 0.00 0.00 3.18
5316 6043 6.189859 AGATGGTGTTGGTTGATATGTTGAT 58.810 36.000 0.00 0.00 0.00 2.57
5317 6044 5.641783 TGGTGTTGGTTGATATGTTGATG 57.358 39.130 0.00 0.00 0.00 3.07
5318 6045 5.320277 TGGTGTTGGTTGATATGTTGATGA 58.680 37.500 0.00 0.00 0.00 2.92
5319 6046 5.772169 TGGTGTTGGTTGATATGTTGATGAA 59.228 36.000 0.00 0.00 0.00 2.57
5320 6047 6.072008 TGGTGTTGGTTGATATGTTGATGAAG 60.072 38.462 0.00 0.00 0.00 3.02
5321 6048 6.150976 GGTGTTGGTTGATATGTTGATGAAGA 59.849 38.462 0.00 0.00 0.00 2.87
5322 6049 7.148018 GGTGTTGGTTGATATGTTGATGAAGAT 60.148 37.037 0.00 0.00 0.00 2.40
5323 6050 8.246180 GTGTTGGTTGATATGTTGATGAAGATT 58.754 33.333 0.00 0.00 0.00 2.40
5324 6051 8.245491 TGTTGGTTGATATGTTGATGAAGATTG 58.755 33.333 0.00 0.00 0.00 2.67
5325 6052 8.461222 GTTGGTTGATATGTTGATGAAGATTGA 58.539 33.333 0.00 0.00 0.00 2.57
5326 6053 7.988737 TGGTTGATATGTTGATGAAGATTGAC 58.011 34.615 0.00 0.00 0.00 3.18
5327 6054 7.067372 TGGTTGATATGTTGATGAAGATTGACC 59.933 37.037 0.00 0.00 0.00 4.02
5328 6055 7.420800 GTTGATATGTTGATGAAGATTGACCC 58.579 38.462 0.00 0.00 0.00 4.46
5329 6056 6.903516 TGATATGTTGATGAAGATTGACCCT 58.096 36.000 0.00 0.00 0.00 4.34
5330 6057 6.994496 TGATATGTTGATGAAGATTGACCCTC 59.006 38.462 0.00 0.00 0.00 4.30
5331 6058 3.955471 TGTTGATGAAGATTGACCCTCC 58.045 45.455 0.00 0.00 0.00 4.30
5332 6059 3.282885 GTTGATGAAGATTGACCCTCCC 58.717 50.000 0.00 0.00 0.00 4.30
5333 6060 2.850833 TGATGAAGATTGACCCTCCCT 58.149 47.619 0.00 0.00 0.00 4.20
5334 6061 2.774234 TGATGAAGATTGACCCTCCCTC 59.226 50.000 0.00 0.00 0.00 4.30
5335 6062 1.195115 TGAAGATTGACCCTCCCTCG 58.805 55.000 0.00 0.00 0.00 4.63
5336 6063 1.273041 TGAAGATTGACCCTCCCTCGA 60.273 52.381 0.00 0.00 0.00 4.04
5337 6064 2.043227 GAAGATTGACCCTCCCTCGAT 58.957 52.381 0.00 0.00 0.00 3.59
5338 6065 1.418334 AGATTGACCCTCCCTCGATG 58.582 55.000 0.00 0.00 0.00 3.84
5339 6066 1.062886 AGATTGACCCTCCCTCGATGA 60.063 52.381 0.00 0.00 0.00 2.92
5340 6067 1.974236 GATTGACCCTCCCTCGATGAT 59.026 52.381 0.00 0.00 0.00 2.45
5341 6068 2.767644 TTGACCCTCCCTCGATGATA 57.232 50.000 0.00 0.00 0.00 2.15
5342 6069 2.294449 TGACCCTCCCTCGATGATAG 57.706 55.000 0.00 0.00 0.00 2.08
5343 6070 1.203063 TGACCCTCCCTCGATGATAGG 60.203 57.143 0.00 0.00 0.00 2.57
5344 6071 1.075698 GACCCTCCCTCGATGATAGGA 59.924 57.143 9.58 0.88 36.08 2.94
5345 6072 1.719378 ACCCTCCCTCGATGATAGGAT 59.281 52.381 9.58 0.00 36.08 3.24
5346 6073 2.291930 ACCCTCCCTCGATGATAGGATC 60.292 54.545 9.58 0.00 36.08 3.36
5347 6074 2.020720 CCTCCCTCGATGATAGGATCG 58.979 57.143 0.00 0.00 45.43 3.69
5348 6075 2.619332 CCTCCCTCGATGATAGGATCGT 60.619 54.545 0.00 0.00 44.57 3.73
5349 6076 3.085533 CTCCCTCGATGATAGGATCGTT 58.914 50.000 0.00 0.00 44.57 3.85
5350 6077 2.820197 TCCCTCGATGATAGGATCGTTG 59.180 50.000 0.00 0.00 44.57 4.10
5351 6078 2.094494 CCCTCGATGATAGGATCGTTGG 60.094 54.545 0.00 0.00 44.57 3.77
5352 6079 2.558795 CCTCGATGATAGGATCGTTGGT 59.441 50.000 0.00 0.00 44.57 3.67
5353 6080 3.569548 CTCGATGATAGGATCGTTGGTG 58.430 50.000 0.00 0.00 44.57 4.17
5354 6081 3.219281 TCGATGATAGGATCGTTGGTGA 58.781 45.455 0.00 0.00 44.57 4.02
5355 6082 3.826729 TCGATGATAGGATCGTTGGTGAT 59.173 43.478 0.00 0.00 44.57 3.06
5356 6083 3.922850 CGATGATAGGATCGTTGGTGATG 59.077 47.826 0.00 0.00 40.32 3.07
5357 6084 4.321230 CGATGATAGGATCGTTGGTGATGA 60.321 45.833 0.00 0.00 40.32 2.92
5358 6085 4.322080 TGATAGGATCGTTGGTGATGAC 57.678 45.455 0.00 0.00 0.00 3.06
5359 6086 2.863401 TAGGATCGTTGGTGATGACG 57.137 50.000 0.00 0.00 40.43 4.35
5363 6090 3.434258 TCGTTGGTGATGACGATGG 57.566 52.632 0.00 0.00 42.67 3.51
5364 6091 0.739462 TCGTTGGTGATGACGATGGC 60.739 55.000 0.00 0.00 42.67 4.40
5365 6092 0.740868 CGTTGGTGATGACGATGGCT 60.741 55.000 0.00 0.00 41.53 4.75
5366 6093 1.453155 GTTGGTGATGACGATGGCTT 58.547 50.000 0.00 0.00 0.00 4.35
5367 6094 1.398390 GTTGGTGATGACGATGGCTTC 59.602 52.381 0.00 0.00 0.00 3.86
5377 6104 2.720659 GATGGCTTCGATTTCCCCC 58.279 57.895 0.00 0.00 0.00 5.40
5378 6105 0.183731 GATGGCTTCGATTTCCCCCT 59.816 55.000 0.00 0.00 0.00 4.79
5379 6106 0.183731 ATGGCTTCGATTTCCCCCTC 59.816 55.000 0.00 0.00 0.00 4.30
5380 6107 1.152943 GGCTTCGATTTCCCCCTCC 60.153 63.158 0.00 0.00 0.00 4.30
5381 6108 1.152943 GCTTCGATTTCCCCCTCCC 60.153 63.158 0.00 0.00 0.00 4.30
5382 6109 1.146263 CTTCGATTTCCCCCTCCCG 59.854 63.158 0.00 0.00 0.00 5.14
5383 6110 2.325393 CTTCGATTTCCCCCTCCCGG 62.325 65.000 0.00 0.00 0.00 5.73
5384 6111 2.766651 CGATTTCCCCCTCCCGGA 60.767 66.667 0.73 0.00 0.00 5.14
5385 6112 2.808206 CGATTTCCCCCTCCCGGAG 61.808 68.421 0.73 7.56 0.00 4.63
5403 6130 2.754375 GGAAGTTTCCCCGGCAGA 59.246 61.111 0.00 0.00 41.62 4.26
5404 6131 1.074248 GGAAGTTTCCCCGGCAGAA 59.926 57.895 0.00 0.00 41.62 3.02
5405 6132 0.323451 GGAAGTTTCCCCGGCAGAAT 60.323 55.000 0.00 0.00 41.62 2.40
5406 6133 1.064979 GGAAGTTTCCCCGGCAGAATA 60.065 52.381 0.00 0.00 41.62 1.75
5407 6134 2.289565 GAAGTTTCCCCGGCAGAATAG 58.710 52.381 0.00 0.00 0.00 1.73
5408 6135 0.107165 AGTTTCCCCGGCAGAATAGC 60.107 55.000 0.00 0.00 0.00 2.97
5409 6136 0.107165 GTTTCCCCGGCAGAATAGCT 60.107 55.000 0.00 0.00 34.17 3.32
5410 6137 0.180406 TTTCCCCGGCAGAATAGCTC 59.820 55.000 0.00 0.00 34.17 4.09
5411 6138 1.696097 TTCCCCGGCAGAATAGCTCC 61.696 60.000 0.00 0.00 34.17 4.70
5412 6139 2.029666 CCCGGCAGAATAGCTCCG 59.970 66.667 0.00 2.41 37.18 4.63
5413 6140 2.663188 CCGGCAGAATAGCTCCGC 60.663 66.667 3.83 0.00 36.56 5.54
5414 6141 2.663188 CGGCAGAATAGCTCCGCC 60.663 66.667 0.00 0.00 39.45 6.13
5415 6142 2.663188 GGCAGAATAGCTCCGCCG 60.663 66.667 0.00 0.00 32.14 6.46
5416 6143 2.663188 GCAGAATAGCTCCGCCGG 60.663 66.667 0.00 0.00 0.00 6.13
5417 6144 3.129300 CAGAATAGCTCCGCCGGA 58.871 61.111 5.05 5.37 0.00 5.14
5425 6152 4.896829 CTCCGCCGGAGCCCTAGA 62.897 72.222 21.84 0.00 43.29 2.43
5426 6153 4.220163 TCCGCCGGAGCCCTAGAT 62.220 66.667 5.05 0.00 34.57 1.98
5427 6154 3.234730 CCGCCGGAGCCCTAGATT 61.235 66.667 5.05 0.00 34.57 2.40
5428 6155 2.029666 CGCCGGAGCCCTAGATTG 59.970 66.667 5.05 0.00 34.57 2.67
5429 6156 2.281139 GCCGGAGCCCTAGATTGC 60.281 66.667 5.05 0.00 0.00 3.56
5430 6157 2.812619 GCCGGAGCCCTAGATTGCT 61.813 63.158 5.05 0.00 41.42 3.91
5431 6158 1.832912 CCGGAGCCCTAGATTGCTT 59.167 57.895 0.00 0.00 38.11 3.91
5432 6159 0.250081 CCGGAGCCCTAGATTGCTTC 60.250 60.000 0.00 0.00 38.11 3.86
5433 6160 0.755686 CGGAGCCCTAGATTGCTTCT 59.244 55.000 0.00 0.00 38.11 2.85
5434 6161 1.539929 CGGAGCCCTAGATTGCTTCTG 60.540 57.143 0.00 0.00 38.11 3.02
5435 6162 1.592064 GAGCCCTAGATTGCTTCTGC 58.408 55.000 0.00 0.00 38.11 4.26
5436 6163 0.182299 AGCCCTAGATTGCTTCTGCC 59.818 55.000 0.00 0.00 38.71 4.85
5437 6164 0.821301 GCCCTAGATTGCTTCTGCCC 60.821 60.000 0.00 0.00 38.71 5.36
5438 6165 0.548031 CCCTAGATTGCTTCTGCCCA 59.452 55.000 0.00 0.00 38.71 5.36
5439 6166 1.064463 CCCTAGATTGCTTCTGCCCAA 60.064 52.381 0.00 0.00 38.71 4.12
5440 6167 2.295885 CCTAGATTGCTTCTGCCCAAG 58.704 52.381 0.00 0.00 38.71 3.61
5441 6168 2.356535 CCTAGATTGCTTCTGCCCAAGT 60.357 50.000 0.00 0.00 38.71 3.16
5442 6169 2.299326 AGATTGCTTCTGCCCAAGTT 57.701 45.000 0.00 0.00 38.71 2.66
5443 6170 2.165998 AGATTGCTTCTGCCCAAGTTC 58.834 47.619 0.00 0.00 38.71 3.01
5444 6171 1.203287 GATTGCTTCTGCCCAAGTTCC 59.797 52.381 0.00 0.00 38.71 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.800250 CAGAGGCCCATGAGACTTTTT 58.200 47.619 0.00 0.00 0.00 1.94
9 10 1.615384 GCAGAGGCCCATGAGACTTTT 60.615 52.381 8.95 0.00 0.00 2.27
10 11 0.034670 GCAGAGGCCCATGAGACTTT 60.035 55.000 8.95 0.00 0.00 2.66
11 12 1.203441 TGCAGAGGCCCATGAGACTT 61.203 55.000 8.95 0.00 40.13 3.01
12 13 0.987081 ATGCAGAGGCCCATGAGACT 60.987 55.000 8.95 0.00 40.13 3.24
13 14 0.106819 AATGCAGAGGCCCATGAGAC 60.107 55.000 8.95 0.00 40.13 3.36
14 15 1.141657 GTAATGCAGAGGCCCATGAGA 59.858 52.381 8.95 0.00 40.13 3.27
15 16 1.142465 AGTAATGCAGAGGCCCATGAG 59.858 52.381 8.95 0.00 40.13 2.90
16 17 1.134007 CAGTAATGCAGAGGCCCATGA 60.134 52.381 8.95 0.00 40.13 3.07
17 18 1.315690 CAGTAATGCAGAGGCCCATG 58.684 55.000 0.00 0.00 40.13 3.66
18 19 0.184451 CCAGTAATGCAGAGGCCCAT 59.816 55.000 0.00 0.00 40.13 4.00
19 20 1.609239 CCAGTAATGCAGAGGCCCA 59.391 57.895 0.00 0.00 40.13 5.36
20 21 1.152881 CCCAGTAATGCAGAGGCCC 60.153 63.158 0.00 0.00 40.13 5.80
21 22 1.825622 GCCCAGTAATGCAGAGGCC 60.826 63.158 0.00 0.00 40.13 5.19
22 23 0.394899 AAGCCCAGTAATGCAGAGGC 60.395 55.000 0.00 0.54 40.79 4.70
23 24 1.211457 AGAAGCCCAGTAATGCAGAGG 59.789 52.381 0.00 0.00 0.00 3.69
24 25 2.706339 AGAAGCCCAGTAATGCAGAG 57.294 50.000 0.00 0.00 0.00 3.35
25 26 3.519510 AGTTAGAAGCCCAGTAATGCAGA 59.480 43.478 0.00 0.00 0.00 4.26
26 27 3.873952 GAGTTAGAAGCCCAGTAATGCAG 59.126 47.826 0.00 0.00 0.00 4.41
27 28 3.370527 GGAGTTAGAAGCCCAGTAATGCA 60.371 47.826 0.00 0.00 0.00 3.96
28 29 3.206964 GGAGTTAGAAGCCCAGTAATGC 58.793 50.000 0.00 0.00 0.00 3.56
29 30 4.487714 TGGAGTTAGAAGCCCAGTAATG 57.512 45.455 0.00 0.00 0.00 1.90
30 31 4.626529 GCTTGGAGTTAGAAGCCCAGTAAT 60.627 45.833 0.00 0.00 38.96 1.89
31 32 3.307480 GCTTGGAGTTAGAAGCCCAGTAA 60.307 47.826 0.00 0.00 38.96 2.24
32 33 2.236395 GCTTGGAGTTAGAAGCCCAGTA 59.764 50.000 0.00 0.00 38.96 2.74
33 34 1.003696 GCTTGGAGTTAGAAGCCCAGT 59.996 52.381 0.00 0.00 38.96 4.00
34 35 1.743996 GCTTGGAGTTAGAAGCCCAG 58.256 55.000 0.00 0.00 38.96 4.45
49 50 0.972983 TCTCTCTTCTCCCGGGCTTG 60.973 60.000 18.49 8.76 0.00 4.01
68 69 2.104170 CTCCTCCTCGCCTTTCTTAGT 58.896 52.381 0.00 0.00 0.00 2.24
69 70 1.202475 GCTCCTCCTCGCCTTTCTTAG 60.202 57.143 0.00 0.00 0.00 2.18
70 71 0.824759 GCTCCTCCTCGCCTTTCTTA 59.175 55.000 0.00 0.00 0.00 2.10
79 80 4.214327 GGAAGGCGCTCCTCCTCG 62.214 72.222 7.64 0.00 43.40 4.63
92 93 0.106719 AGAGAGAGCCGGAGAGGAAG 60.107 60.000 5.05 0.00 45.00 3.46
113 114 4.069837 CGTGAGCGCAAGAGAGAG 57.930 61.111 11.47 0.00 43.02 3.20
150 153 2.455163 CCCCTCTTTCCCTATCCCTAGA 59.545 54.545 0.00 0.00 0.00 2.43
377 842 0.958091 CACATCACCTCCCGCAAAAA 59.042 50.000 0.00 0.00 0.00 1.94
378 843 0.893270 CCACATCACCTCCCGCAAAA 60.893 55.000 0.00 0.00 0.00 2.44
379 844 1.303236 CCACATCACCTCCCGCAAA 60.303 57.895 0.00 0.00 0.00 3.68
380 845 1.195442 TACCACATCACCTCCCGCAA 61.195 55.000 0.00 0.00 0.00 4.85
381 846 1.610967 TACCACATCACCTCCCGCA 60.611 57.895 0.00 0.00 0.00 5.69
382 847 1.153429 GTACCACATCACCTCCCGC 60.153 63.158 0.00 0.00 0.00 6.13
383 848 0.902531 AAGTACCACATCACCTCCCG 59.097 55.000 0.00 0.00 0.00 5.14
384 849 3.244770 TGAAAAGTACCACATCACCTCCC 60.245 47.826 0.00 0.00 0.00 4.30
385 850 4.015872 TGAAAAGTACCACATCACCTCC 57.984 45.455 0.00 0.00 0.00 4.30
386 851 5.491982 AGATGAAAAGTACCACATCACCTC 58.508 41.667 15.94 3.21 40.74 3.85
387 852 5.505181 AGATGAAAAGTACCACATCACCT 57.495 39.130 15.94 1.07 40.74 4.00
388 853 5.163854 CGAAGATGAAAAGTACCACATCACC 60.164 44.000 15.94 9.34 40.74 4.02
465 930 5.456186 GCAGATCCTTTAGGCAGGGTTAATA 60.456 44.000 0.00 0.00 34.24 0.98
487 952 2.593346 AACCAAAGAAACGCAATGCA 57.407 40.000 5.91 0.00 0.00 3.96
523 988 3.669939 ACAGTTAATTCTGGGGGATGG 57.330 47.619 0.00 0.00 39.48 3.51
591 1216 4.737765 TGAAGGAAAAAGCATTTCGTTTCG 59.262 37.500 18.03 0.00 37.28 3.46
602 1227 6.438763 TCTCGATTTTCTTGAAGGAAAAAGC 58.561 36.000 2.27 0.50 44.71 3.51
626 1290 1.448189 CCCGTCTCGAGTCTCGACT 60.448 63.158 20.85 0.00 44.82 4.18
627 1291 3.091529 CCCGTCTCGAGTCTCGAC 58.908 66.667 20.85 11.93 44.82 4.20
1548 2270 6.703165 AGAAAATGAGTTGAAAATTGACAGGC 59.297 34.615 0.00 0.00 0.00 4.85
1626 2348 5.690857 AGAAAGAGTTAGCGATTAATACGGC 59.309 40.000 8.63 4.17 0.00 5.68
1839 2562 3.063997 CAGGAACCACATATTCGAAGCAC 59.936 47.826 3.35 0.00 0.00 4.40
1980 2703 1.376037 GCTACCAGAAGCCTTGCGT 60.376 57.895 0.00 0.00 36.45 5.24
2247 2970 2.600792 CGATTCTAATTTGCTCAGCGGC 60.601 50.000 0.00 0.00 0.00 6.53
2415 3138 0.904865 ATGCCTCGACACCAGAAGGA 60.905 55.000 0.00 0.00 38.69 3.36
2482 3205 8.604890 ACTTATAGCTTTAAATCGACTTGAAGC 58.395 33.333 23.52 23.52 37.21 3.86
2686 3409 4.398319 GAAATCCTTGACTCCCTTGACAA 58.602 43.478 0.00 0.00 0.00 3.18
3069 3792 3.984292 GCACCTTCTGCAGAAATCG 57.016 52.632 28.16 20.04 46.29 3.34
3141 3864 3.297134 AAGACTGGCCAAAAGAAGACA 57.703 42.857 7.01 0.00 0.00 3.41
3355 4079 8.114331 TGCTTCATATTTTCATGACTGTTTCT 57.886 30.769 0.00 0.00 34.69 2.52
3593 4317 4.913376 AGTTGCATATCTTCAAATGTCGC 58.087 39.130 0.00 0.00 0.00 5.19
3616 4340 2.303022 GACCAACCACTCATCTTCCTCA 59.697 50.000 0.00 0.00 0.00 3.86
3622 4346 1.271597 GGCTTGACCAACCACTCATCT 60.272 52.381 0.00 0.00 38.86 2.90
3916 4640 3.064545 GGAAATCAGCCTCATTCTTGTCG 59.935 47.826 0.00 0.00 0.00 4.35
4225 4949 1.966451 GTTTGCCCACACCTCCTCG 60.966 63.158 0.00 0.00 0.00 4.63
4436 5160 5.179555 GCTTTTACTCCAGAAGTCATTCGTT 59.820 40.000 0.00 0.00 40.58 3.85
4453 5177 8.089115 AGTGTTCAGAGACAATTAGCTTTTAC 57.911 34.615 0.00 0.00 0.00 2.01
4647 5374 1.014352 GCGTATACCAACCAGGCAAG 58.986 55.000 0.00 0.00 43.14 4.01
4809 5536 3.236632 TCAAGACCACAGTGATCATCG 57.763 47.619 0.62 0.00 0.00 3.84
4831 5558 2.256461 CAAGGACCAAAGCAGCGC 59.744 61.111 0.00 0.00 0.00 5.92
4902 5629 1.338011 CGGGCCTGATGTTTGCAAAAT 60.338 47.619 14.67 9.76 0.00 1.82
4907 5634 0.392461 TAGACGGGCCTGATGTTTGC 60.392 55.000 21.41 0.00 0.00 3.68
4913 5640 1.075970 TGAGCTAGACGGGCCTGAT 60.076 57.895 21.41 9.07 0.00 2.90
4989 5716 8.902540 ACATGACACTAAAGTTCACTAAATCA 57.097 30.769 0.00 0.00 0.00 2.57
4999 5726 8.677148 AATGTTGACTACATGACACTAAAGTT 57.323 30.769 0.00 0.00 46.75 2.66
5001 5728 8.223769 GTGAATGTTGACTACATGACACTAAAG 58.776 37.037 21.07 0.00 46.75 1.85
5002 5729 7.713073 TGTGAATGTTGACTACATGACACTAAA 59.287 33.333 24.69 13.15 46.75 1.85
5003 5730 7.213678 TGTGAATGTTGACTACATGACACTAA 58.786 34.615 24.69 13.58 46.75 2.24
5005 5732 5.610398 TGTGAATGTTGACTACATGACACT 58.390 37.500 24.69 6.54 46.75 3.55
5006 5733 5.922739 TGTGAATGTTGACTACATGACAC 57.077 39.130 21.32 21.32 46.75 3.67
5007 5734 7.659390 TGTTATGTGAATGTTGACTACATGACA 59.341 33.333 13.65 13.65 46.75 3.58
5008 5735 7.957484 GTGTTATGTGAATGTTGACTACATGAC 59.043 37.037 0.00 0.00 46.75 3.06
5009 5736 7.119116 GGTGTTATGTGAATGTTGACTACATGA 59.881 37.037 0.00 0.00 46.75 3.07
5010 5737 7.094848 TGGTGTTATGTGAATGTTGACTACATG 60.095 37.037 3.22 0.00 46.75 3.21
5012 5739 6.203915 GTGGTGTTATGTGAATGTTGACTACA 59.796 38.462 0.00 0.00 41.97 2.74
5013 5740 6.426937 AGTGGTGTTATGTGAATGTTGACTAC 59.573 38.462 0.00 0.00 0.00 2.73
5014 5741 6.530120 AGTGGTGTTATGTGAATGTTGACTA 58.470 36.000 0.00 0.00 0.00 2.59
5015 5742 5.376625 AGTGGTGTTATGTGAATGTTGACT 58.623 37.500 0.00 0.00 0.00 3.41
5016 5743 5.689383 AGTGGTGTTATGTGAATGTTGAC 57.311 39.130 0.00 0.00 0.00 3.18
5017 5744 6.292150 TGTAGTGGTGTTATGTGAATGTTGA 58.708 36.000 0.00 0.00 0.00 3.18
5018 5745 6.348458 CCTGTAGTGGTGTTATGTGAATGTTG 60.348 42.308 0.00 0.00 0.00 3.33
5019 5746 5.705441 CCTGTAGTGGTGTTATGTGAATGTT 59.295 40.000 0.00 0.00 0.00 2.71
5020 5747 5.012664 TCCTGTAGTGGTGTTATGTGAATGT 59.987 40.000 0.00 0.00 0.00 2.71
5021 5748 5.487433 TCCTGTAGTGGTGTTATGTGAATG 58.513 41.667 0.00 0.00 0.00 2.67
5022 5749 5.755409 TCCTGTAGTGGTGTTATGTGAAT 57.245 39.130 0.00 0.00 0.00 2.57
5023 5750 5.554437 TTCCTGTAGTGGTGTTATGTGAA 57.446 39.130 0.00 0.00 0.00 3.18
5024 5751 5.305902 TCTTTCCTGTAGTGGTGTTATGTGA 59.694 40.000 0.00 0.00 0.00 3.58
5025 5752 5.408604 GTCTTTCCTGTAGTGGTGTTATGTG 59.591 44.000 0.00 0.00 0.00 3.21
5026 5753 5.071250 TGTCTTTCCTGTAGTGGTGTTATGT 59.929 40.000 0.00 0.00 0.00 2.29
5027 5754 5.547465 TGTCTTTCCTGTAGTGGTGTTATG 58.453 41.667 0.00 0.00 0.00 1.90
5028 5755 5.818678 TGTCTTTCCTGTAGTGGTGTTAT 57.181 39.130 0.00 0.00 0.00 1.89
5029 5756 5.104859 TGTTGTCTTTCCTGTAGTGGTGTTA 60.105 40.000 0.00 0.00 0.00 2.41
5030 5757 4.196971 GTTGTCTTTCCTGTAGTGGTGTT 58.803 43.478 0.00 0.00 0.00 3.32
5031 5758 3.199071 TGTTGTCTTTCCTGTAGTGGTGT 59.801 43.478 0.00 0.00 0.00 4.16
5032 5759 3.804036 TGTTGTCTTTCCTGTAGTGGTG 58.196 45.455 0.00 0.00 0.00 4.17
5033 5760 4.706842 ATGTTGTCTTTCCTGTAGTGGT 57.293 40.909 0.00 0.00 0.00 4.16
5034 5761 5.547465 TGTATGTTGTCTTTCCTGTAGTGG 58.453 41.667 0.00 0.00 0.00 4.00
5035 5762 7.099764 AGATGTATGTTGTCTTTCCTGTAGTG 58.900 38.462 0.00 0.00 0.00 2.74
5036 5763 7.039011 TGAGATGTATGTTGTCTTTCCTGTAGT 60.039 37.037 0.00 0.00 0.00 2.73
5037 5764 7.323420 TGAGATGTATGTTGTCTTTCCTGTAG 58.677 38.462 0.00 0.00 0.00 2.74
5038 5765 7.239763 TGAGATGTATGTTGTCTTTCCTGTA 57.760 36.000 0.00 0.00 0.00 2.74
5039 5766 6.114187 TGAGATGTATGTTGTCTTTCCTGT 57.886 37.500 0.00 0.00 0.00 4.00
5040 5767 6.820152 TGATGAGATGTATGTTGTCTTTCCTG 59.180 38.462 0.00 0.00 0.00 3.86
5041 5768 6.950842 TGATGAGATGTATGTTGTCTTTCCT 58.049 36.000 0.00 0.00 0.00 3.36
5042 5769 7.615582 TTGATGAGATGTATGTTGTCTTTCC 57.384 36.000 0.00 0.00 0.00 3.13
5047 5774 9.803130 CGATATTTTGATGAGATGTATGTTGTC 57.197 33.333 0.00 0.00 0.00 3.18
5048 5775 9.546428 TCGATATTTTGATGAGATGTATGTTGT 57.454 29.630 0.00 0.00 0.00 3.32
5051 5778 8.703336 CGTTCGATATTTTGATGAGATGTATGT 58.297 33.333 0.00 0.00 0.00 2.29
5052 5779 8.915654 TCGTTCGATATTTTGATGAGATGTATG 58.084 33.333 0.00 0.00 0.00 2.39
5053 5780 9.476202 TTCGTTCGATATTTTGATGAGATGTAT 57.524 29.630 0.00 0.00 0.00 2.29
5054 5781 8.865590 TTCGTTCGATATTTTGATGAGATGTA 57.134 30.769 0.00 0.00 0.00 2.29
5055 5782 7.770801 TTCGTTCGATATTTTGATGAGATGT 57.229 32.000 0.00 0.00 0.00 3.06
5056 5783 9.732893 GTATTCGTTCGATATTTTGATGAGATG 57.267 33.333 0.00 0.00 0.00 2.90
5057 5784 8.926710 GGTATTCGTTCGATATTTTGATGAGAT 58.073 33.333 0.00 0.00 0.00 2.75
5058 5785 7.923878 TGGTATTCGTTCGATATTTTGATGAGA 59.076 33.333 0.00 0.00 0.00 3.27
5059 5786 8.072238 TGGTATTCGTTCGATATTTTGATGAG 57.928 34.615 0.00 0.00 0.00 2.90
5060 5787 8.426881 TTGGTATTCGTTCGATATTTTGATGA 57.573 30.769 0.00 0.00 0.00 2.92
5061 5788 9.663904 ATTTGGTATTCGTTCGATATTTTGATG 57.336 29.630 0.00 0.00 0.00 3.07
5063 5790 9.710979 GAATTTGGTATTCGTTCGATATTTTGA 57.289 29.630 0.00 0.00 0.00 2.69
5064 5791 9.497030 TGAATTTGGTATTCGTTCGATATTTTG 57.503 29.630 0.00 0.00 0.00 2.44
5065 5792 9.498307 GTGAATTTGGTATTCGTTCGATATTTT 57.502 29.630 0.00 0.00 0.00 1.82
5066 5793 8.670135 TGTGAATTTGGTATTCGTTCGATATTT 58.330 29.630 0.00 0.00 0.00 1.40
5067 5794 8.203937 TGTGAATTTGGTATTCGTTCGATATT 57.796 30.769 0.00 0.00 0.00 1.28
5068 5795 7.780008 TGTGAATTTGGTATTCGTTCGATAT 57.220 32.000 0.00 0.00 0.00 1.63
5069 5796 7.492994 TCATGTGAATTTGGTATTCGTTCGATA 59.507 33.333 0.00 0.00 0.00 2.92
5070 5797 6.315144 TCATGTGAATTTGGTATTCGTTCGAT 59.685 34.615 0.00 0.00 0.00 3.59
5071 5798 5.639931 TCATGTGAATTTGGTATTCGTTCGA 59.360 36.000 0.00 0.00 0.00 3.71
5072 5799 5.863898 TCATGTGAATTTGGTATTCGTTCG 58.136 37.500 0.00 0.00 0.00 3.95
5073 5800 9.221775 GTAATCATGTGAATTTGGTATTCGTTC 57.778 33.333 0.00 0.00 0.00 3.95
5074 5801 8.956426 AGTAATCATGTGAATTTGGTATTCGTT 58.044 29.630 0.00 0.00 0.00 3.85
5075 5802 8.506168 AGTAATCATGTGAATTTGGTATTCGT 57.494 30.769 0.00 0.00 0.00 3.85
5081 5808 9.912634 CTTTGTAAGTAATCATGTGAATTTGGT 57.087 29.630 0.00 0.00 0.00 3.67
5082 5809 8.863049 GCTTTGTAAGTAATCATGTGAATTTGG 58.137 33.333 0.00 0.00 0.00 3.28
5083 5810 9.409312 TGCTTTGTAAGTAATCATGTGAATTTG 57.591 29.630 0.00 0.00 0.00 2.32
5085 5812 9.577110 CATGCTTTGTAAGTAATCATGTGAATT 57.423 29.630 0.00 0.00 0.00 2.17
5086 5813 8.742777 ACATGCTTTGTAAGTAATCATGTGAAT 58.257 29.630 4.43 0.00 40.73 2.57
5087 5814 8.109705 ACATGCTTTGTAAGTAATCATGTGAA 57.890 30.769 4.43 0.00 40.73 3.18
5088 5815 7.686438 ACATGCTTTGTAAGTAATCATGTGA 57.314 32.000 4.43 0.00 40.73 3.58
5089 5816 8.746922 AAACATGCTTTGTAAGTAATCATGTG 57.253 30.769 5.83 0.00 41.19 3.21
5096 5823 9.891828 CTGAACATAAACATGCTTTGTAAGTAA 57.108 29.630 0.00 0.00 37.68 2.24
5097 5824 8.511321 CCTGAACATAAACATGCTTTGTAAGTA 58.489 33.333 0.00 0.00 37.68 2.24
5098 5825 7.230510 TCCTGAACATAAACATGCTTTGTAAGT 59.769 33.333 0.00 0.00 37.68 2.24
5099 5826 7.592938 TCCTGAACATAAACATGCTTTGTAAG 58.407 34.615 0.00 0.00 37.68 2.34
5100 5827 7.517614 TCCTGAACATAAACATGCTTTGTAA 57.482 32.000 0.00 0.00 37.68 2.41
5101 5828 7.392953 TGATCCTGAACATAAACATGCTTTGTA 59.607 33.333 0.00 0.00 37.68 2.41
5102 5829 6.209192 TGATCCTGAACATAAACATGCTTTGT 59.791 34.615 0.00 0.00 41.53 2.83
5103 5830 6.623486 TGATCCTGAACATAAACATGCTTTG 58.377 36.000 0.00 0.00 0.00 2.77
5104 5831 6.660521 TCTGATCCTGAACATAAACATGCTTT 59.339 34.615 0.00 0.00 0.00 3.51
5105 5832 6.182627 TCTGATCCTGAACATAAACATGCTT 58.817 36.000 0.00 0.00 0.00 3.91
5106 5833 5.748402 TCTGATCCTGAACATAAACATGCT 58.252 37.500 0.00 0.00 0.00 3.79
5107 5834 5.008415 CCTCTGATCCTGAACATAAACATGC 59.992 44.000 0.00 0.00 0.00 4.06
5108 5835 5.530171 CCCTCTGATCCTGAACATAAACATG 59.470 44.000 0.00 0.00 0.00 3.21
5109 5836 5.398353 CCCCTCTGATCCTGAACATAAACAT 60.398 44.000 0.00 0.00 0.00 2.71
5110 5837 4.080356 CCCCTCTGATCCTGAACATAAACA 60.080 45.833 0.00 0.00 0.00 2.83
5111 5838 4.080299 ACCCCTCTGATCCTGAACATAAAC 60.080 45.833 0.00 0.00 0.00 2.01
5112 5839 4.111577 ACCCCTCTGATCCTGAACATAAA 58.888 43.478 0.00 0.00 0.00 1.40
5113 5840 3.736094 ACCCCTCTGATCCTGAACATAA 58.264 45.455 0.00 0.00 0.00 1.90
5114 5841 3.421394 ACCCCTCTGATCCTGAACATA 57.579 47.619 0.00 0.00 0.00 2.29
5115 5842 2.277008 ACCCCTCTGATCCTGAACAT 57.723 50.000 0.00 0.00 0.00 2.71
5116 5843 2.940514 TACCCCTCTGATCCTGAACA 57.059 50.000 0.00 0.00 0.00 3.18
5117 5844 3.711704 TCAATACCCCTCTGATCCTGAAC 59.288 47.826 0.00 0.00 0.00 3.18
5118 5845 4.007581 TCAATACCCCTCTGATCCTGAA 57.992 45.455 0.00 0.00 0.00 3.02
5119 5846 3.706389 TCAATACCCCTCTGATCCTGA 57.294 47.619 0.00 0.00 0.00 3.86
5120 5847 4.989875 ATTCAATACCCCTCTGATCCTG 57.010 45.455 0.00 0.00 0.00 3.86
5121 5848 6.334296 TGATATTCAATACCCCTCTGATCCT 58.666 40.000 0.00 0.00 0.00 3.24
5122 5849 6.627087 TGATATTCAATACCCCTCTGATCC 57.373 41.667 0.00 0.00 0.00 3.36
5125 5852 8.605947 CCTTAATGATATTCAATACCCCTCTGA 58.394 37.037 0.00 0.00 0.00 3.27
5126 5853 8.605947 TCCTTAATGATATTCAATACCCCTCTG 58.394 37.037 0.00 0.00 0.00 3.35
5127 5854 8.757307 TCCTTAATGATATTCAATACCCCTCT 57.243 34.615 0.00 0.00 0.00 3.69
5128 5855 9.620259 GATCCTTAATGATATTCAATACCCCTC 57.380 37.037 0.00 0.00 0.00 4.30
5129 5856 9.356649 AGATCCTTAATGATATTCAATACCCCT 57.643 33.333 0.00 0.00 0.00 4.79
5130 5857 9.401058 CAGATCCTTAATGATATTCAATACCCC 57.599 37.037 0.00 0.00 0.00 4.95
5141 5868 9.498176 CATCACATGTTCAGATCCTTAATGATA 57.502 33.333 0.00 0.00 0.00 2.15
5142 5869 7.997223 ACATCACATGTTCAGATCCTTAATGAT 59.003 33.333 0.00 0.00 41.63 2.45
5143 5870 7.341030 ACATCACATGTTCAGATCCTTAATGA 58.659 34.615 0.00 0.00 41.63 2.57
5144 5871 7.563888 ACATCACATGTTCAGATCCTTAATG 57.436 36.000 0.00 0.00 41.63 1.90
5164 5891 6.096673 AGTTGGTTTATTTGGTGGAACATC 57.903 37.500 0.00 0.00 44.52 3.06
5165 5892 6.295067 GCTAGTTGGTTTATTTGGTGGAACAT 60.295 38.462 0.00 0.00 44.52 2.71
5166 5893 5.010213 GCTAGTTGGTTTATTTGGTGGAACA 59.990 40.000 0.00 0.00 39.98 3.18
5167 5894 5.010213 TGCTAGTTGGTTTATTTGGTGGAAC 59.990 40.000 0.00 0.00 0.00 3.62
5168 5895 5.141182 TGCTAGTTGGTTTATTTGGTGGAA 58.859 37.500 0.00 0.00 0.00 3.53
5169 5896 4.730966 TGCTAGTTGGTTTATTTGGTGGA 58.269 39.130 0.00 0.00 0.00 4.02
5170 5897 5.184864 TGATGCTAGTTGGTTTATTTGGTGG 59.815 40.000 0.00 0.00 0.00 4.61
5171 5898 6.266168 TGATGCTAGTTGGTTTATTTGGTG 57.734 37.500 0.00 0.00 0.00 4.17
5172 5899 6.493458 AGTTGATGCTAGTTGGTTTATTTGGT 59.507 34.615 0.00 0.00 0.00 3.67
5173 5900 6.924111 AGTTGATGCTAGTTGGTTTATTTGG 58.076 36.000 0.00 0.00 0.00 3.28
5174 5901 7.029563 GGAGTTGATGCTAGTTGGTTTATTTG 58.970 38.462 0.00 0.00 0.00 2.32
5175 5902 6.719370 TGGAGTTGATGCTAGTTGGTTTATTT 59.281 34.615 0.00 0.00 0.00 1.40
5176 5903 6.245408 TGGAGTTGATGCTAGTTGGTTTATT 58.755 36.000 0.00 0.00 0.00 1.40
5177 5904 5.815581 TGGAGTTGATGCTAGTTGGTTTAT 58.184 37.500 0.00 0.00 0.00 1.40
5178 5905 5.235850 TGGAGTTGATGCTAGTTGGTTTA 57.764 39.130 0.00 0.00 0.00 2.01
5179 5906 4.098914 TGGAGTTGATGCTAGTTGGTTT 57.901 40.909 0.00 0.00 0.00 3.27
5180 5907 3.788227 TGGAGTTGATGCTAGTTGGTT 57.212 42.857 0.00 0.00 0.00 3.67
5181 5908 3.560025 CCTTGGAGTTGATGCTAGTTGGT 60.560 47.826 0.00 0.00 0.00 3.67
5182 5909 3.012518 CCTTGGAGTTGATGCTAGTTGG 58.987 50.000 0.00 0.00 0.00 3.77
5183 5910 3.937706 CTCCTTGGAGTTGATGCTAGTTG 59.062 47.826 8.45 0.00 0.00 3.16
5184 5911 3.584848 ACTCCTTGGAGTTGATGCTAGTT 59.415 43.478 15.93 0.00 29.93 2.24
5185 5912 3.177228 ACTCCTTGGAGTTGATGCTAGT 58.823 45.455 15.93 0.00 29.93 2.57
5186 5913 3.902881 ACTCCTTGGAGTTGATGCTAG 57.097 47.619 15.93 0.00 29.93 3.42
5187 5914 5.425217 TGATTACTCCTTGGAGTTGATGCTA 59.575 40.000 25.01 5.02 36.68 3.49
5188 5915 4.225942 TGATTACTCCTTGGAGTTGATGCT 59.774 41.667 25.01 3.62 36.68 3.79
5189 5916 4.517285 TGATTACTCCTTGGAGTTGATGC 58.483 43.478 25.01 12.27 36.68 3.91
5190 5917 5.939883 TGTTGATTACTCCTTGGAGTTGATG 59.060 40.000 25.01 0.00 36.68 3.07
5191 5918 5.940470 GTGTTGATTACTCCTTGGAGTTGAT 59.060 40.000 25.01 18.84 36.68 2.57
5192 5919 5.071788 AGTGTTGATTACTCCTTGGAGTTGA 59.928 40.000 25.01 15.49 36.68 3.18
5193 5920 5.308825 AGTGTTGATTACTCCTTGGAGTTG 58.691 41.667 25.01 0.43 36.68 3.16
5194 5921 5.568620 AGTGTTGATTACTCCTTGGAGTT 57.431 39.130 25.01 10.33 36.68 3.01
5195 5922 5.780793 AGTAGTGTTGATTACTCCTTGGAGT 59.219 40.000 23.63 23.63 39.08 3.85
5196 5923 6.287589 AGTAGTGTTGATTACTCCTTGGAG 57.712 41.667 14.58 14.58 0.00 3.86
5197 5924 6.127423 GCTAGTAGTGTTGATTACTCCTTGGA 60.127 42.308 0.00 0.00 32.64 3.53
5198 5925 6.043411 GCTAGTAGTGTTGATTACTCCTTGG 58.957 44.000 0.00 0.00 32.64 3.61
5199 5926 6.631016 TGCTAGTAGTGTTGATTACTCCTTG 58.369 40.000 0.00 0.00 32.64 3.61
5200 5927 6.852420 TGCTAGTAGTGTTGATTACTCCTT 57.148 37.500 0.00 0.00 32.64 3.36
5201 5928 6.351117 GGTTGCTAGTAGTGTTGATTACTCCT 60.351 42.308 0.00 0.00 32.64 3.69
5202 5929 5.811100 GGTTGCTAGTAGTGTTGATTACTCC 59.189 44.000 0.00 0.00 32.64 3.85
5203 5930 5.811100 GGGTTGCTAGTAGTGTTGATTACTC 59.189 44.000 0.00 0.00 32.64 2.59
5204 5931 5.247564 TGGGTTGCTAGTAGTGTTGATTACT 59.752 40.000 0.00 0.00 34.64 2.24
5205 5932 5.350640 GTGGGTTGCTAGTAGTGTTGATTAC 59.649 44.000 0.00 0.00 0.00 1.89
5206 5933 5.012251 TGTGGGTTGCTAGTAGTGTTGATTA 59.988 40.000 0.00 0.00 0.00 1.75
5207 5934 4.202419 TGTGGGTTGCTAGTAGTGTTGATT 60.202 41.667 0.00 0.00 0.00 2.57
5208 5935 3.326588 TGTGGGTTGCTAGTAGTGTTGAT 59.673 43.478 0.00 0.00 0.00 2.57
5209 5936 2.701423 TGTGGGTTGCTAGTAGTGTTGA 59.299 45.455 0.00 0.00 0.00 3.18
5210 5937 3.067106 CTGTGGGTTGCTAGTAGTGTTG 58.933 50.000 0.00 0.00 0.00 3.33
5211 5938 2.038557 CCTGTGGGTTGCTAGTAGTGTT 59.961 50.000 0.00 0.00 0.00 3.32
5212 5939 1.623811 CCTGTGGGTTGCTAGTAGTGT 59.376 52.381 0.00 0.00 0.00 3.55
5213 5940 1.623811 ACCTGTGGGTTGCTAGTAGTG 59.376 52.381 0.00 0.00 44.73 2.74
5214 5941 2.025636 ACCTGTGGGTTGCTAGTAGT 57.974 50.000 0.00 0.00 44.73 2.73
5215 5942 2.167900 GGTACCTGTGGGTTGCTAGTAG 59.832 54.545 4.06 0.00 44.73 2.57
5216 5943 2.181975 GGTACCTGTGGGTTGCTAGTA 58.818 52.381 4.06 0.00 44.73 1.82
5217 5944 0.981943 GGTACCTGTGGGTTGCTAGT 59.018 55.000 4.06 0.00 44.73 2.57
5218 5945 0.981183 TGGTACCTGTGGGTTGCTAG 59.019 55.000 14.36 0.00 44.73 3.42
5219 5946 1.436326 TTGGTACCTGTGGGTTGCTA 58.564 50.000 14.36 0.00 44.73 3.49
5220 5947 0.777446 ATTGGTACCTGTGGGTTGCT 59.223 50.000 14.36 0.00 44.73 3.91
5221 5948 2.500392 TATTGGTACCTGTGGGTTGC 57.500 50.000 14.36 0.00 44.73 4.17
5222 5949 4.199310 CTCATATTGGTACCTGTGGGTTG 58.801 47.826 14.36 2.31 44.73 3.77
5223 5950 3.371595 GCTCATATTGGTACCTGTGGGTT 60.372 47.826 14.36 0.00 44.73 4.11
5225 5952 2.439507 AGCTCATATTGGTACCTGTGGG 59.560 50.000 14.36 3.34 38.88 4.61
5226 5953 3.845781 AGCTCATATTGGTACCTGTGG 57.154 47.619 14.36 0.00 0.00 4.17
5227 5954 4.336433 CCAAAGCTCATATTGGTACCTGTG 59.664 45.833 14.36 5.08 40.96 3.66
5228 5955 4.526970 CCAAAGCTCATATTGGTACCTGT 58.473 43.478 14.36 4.10 40.96 4.00
5229 5956 3.885297 CCCAAAGCTCATATTGGTACCTG 59.115 47.826 14.36 2.70 43.71 4.00
5230 5957 3.785887 TCCCAAAGCTCATATTGGTACCT 59.214 43.478 14.36 0.00 43.71 3.08
5231 5958 3.883489 GTCCCAAAGCTCATATTGGTACC 59.117 47.826 12.76 4.43 43.71 3.34
5232 5959 4.523083 TGTCCCAAAGCTCATATTGGTAC 58.477 43.478 12.76 8.50 43.71 3.34
5233 5960 4.853468 TGTCCCAAAGCTCATATTGGTA 57.147 40.909 12.76 0.00 43.71 3.25
5234 5961 3.737559 TGTCCCAAAGCTCATATTGGT 57.262 42.857 12.76 0.00 43.71 3.67
5235 5962 4.706476 TCTTTGTCCCAAAGCTCATATTGG 59.294 41.667 7.79 7.79 44.61 3.16
5236 5963 5.902613 TCTTTGTCCCAAAGCTCATATTG 57.097 39.130 11.00 0.00 0.00 1.90
5237 5964 6.664816 TCAATCTTTGTCCCAAAGCTCATATT 59.335 34.615 11.00 4.08 0.00 1.28
5238 5965 6.189859 TCAATCTTTGTCCCAAAGCTCATAT 58.810 36.000 11.00 0.00 0.00 1.78
5239 5966 5.569355 TCAATCTTTGTCCCAAAGCTCATA 58.431 37.500 11.00 0.00 0.00 2.15
5240 5967 4.410099 TCAATCTTTGTCCCAAAGCTCAT 58.590 39.130 11.00 0.00 0.00 2.90
5241 5968 3.831323 TCAATCTTTGTCCCAAAGCTCA 58.169 40.909 11.00 0.00 0.00 4.26
5242 5969 4.037923 TGTTCAATCTTTGTCCCAAAGCTC 59.962 41.667 11.00 1.09 0.00 4.09
5243 5970 3.960102 TGTTCAATCTTTGTCCCAAAGCT 59.040 39.130 11.00 0.24 0.00 3.74
5244 5971 4.051237 GTGTTCAATCTTTGTCCCAAAGC 58.949 43.478 11.00 0.00 0.00 3.51
5245 5972 5.261209 TGTGTTCAATCTTTGTCCCAAAG 57.739 39.130 9.83 9.83 0.00 2.77
5246 5973 5.420421 TCTTGTGTTCAATCTTTGTCCCAAA 59.580 36.000 0.00 0.00 32.82 3.28
5247 5974 4.952957 TCTTGTGTTCAATCTTTGTCCCAA 59.047 37.500 0.00 0.00 32.82 4.12
5248 5975 4.531854 TCTTGTGTTCAATCTTTGTCCCA 58.468 39.130 0.00 0.00 32.82 4.37
5249 5976 4.821805 TCTCTTGTGTTCAATCTTTGTCCC 59.178 41.667 0.00 0.00 32.82 4.46
5250 5977 6.205464 TCATCTCTTGTGTTCAATCTTTGTCC 59.795 38.462 0.00 0.00 32.82 4.02
5251 5978 7.194607 TCATCTCTTGTGTTCAATCTTTGTC 57.805 36.000 0.00 0.00 32.82 3.18
5252 5979 7.284034 AGTTCATCTCTTGTGTTCAATCTTTGT 59.716 33.333 0.00 0.00 32.82 2.83
5253 5980 7.646314 AGTTCATCTCTTGTGTTCAATCTTTG 58.354 34.615 0.00 0.00 32.82 2.77
5254 5981 7.814264 AGTTCATCTCTTGTGTTCAATCTTT 57.186 32.000 0.00 0.00 32.82 2.52
5255 5982 7.605691 CCTAGTTCATCTCTTGTGTTCAATCTT 59.394 37.037 0.00 0.00 32.82 2.40
5256 5983 7.102346 CCTAGTTCATCTCTTGTGTTCAATCT 58.898 38.462 0.00 0.00 32.82 2.40
5257 5984 6.314896 CCCTAGTTCATCTCTTGTGTTCAATC 59.685 42.308 0.00 0.00 32.82 2.67
5258 5985 6.176183 CCCTAGTTCATCTCTTGTGTTCAAT 58.824 40.000 0.00 0.00 32.82 2.57
5259 5986 5.071788 ACCCTAGTTCATCTCTTGTGTTCAA 59.928 40.000 0.00 0.00 0.00 2.69
5260 5987 4.593206 ACCCTAGTTCATCTCTTGTGTTCA 59.407 41.667 0.00 0.00 0.00 3.18
5261 5988 5.153950 ACCCTAGTTCATCTCTTGTGTTC 57.846 43.478 0.00 0.00 0.00 3.18
5262 5989 5.568620 AACCCTAGTTCATCTCTTGTGTT 57.431 39.130 0.00 0.00 0.00 3.32
5263 5990 5.071788 TCAAACCCTAGTTCATCTCTTGTGT 59.928 40.000 0.00 0.00 34.19 3.72
5264 5991 5.551233 TCAAACCCTAGTTCATCTCTTGTG 58.449 41.667 0.00 0.00 34.19 3.33
5265 5992 5.544176 TCTCAAACCCTAGTTCATCTCTTGT 59.456 40.000 0.00 0.00 34.19 3.16
5266 5993 6.042638 TCTCAAACCCTAGTTCATCTCTTG 57.957 41.667 0.00 0.00 34.19 3.02
5267 5994 5.188751 CCTCTCAAACCCTAGTTCATCTCTT 59.811 44.000 0.00 0.00 34.19 2.85
5268 5995 4.714308 CCTCTCAAACCCTAGTTCATCTCT 59.286 45.833 0.00 0.00 34.19 3.10
5269 5996 4.712337 TCCTCTCAAACCCTAGTTCATCTC 59.288 45.833 0.00 0.00 34.19 2.75
5270 5997 4.689062 TCCTCTCAAACCCTAGTTCATCT 58.311 43.478 0.00 0.00 34.19 2.90
5271 5998 4.712337 TCTCCTCTCAAACCCTAGTTCATC 59.288 45.833 0.00 0.00 34.19 2.92
5272 5999 4.689062 TCTCCTCTCAAACCCTAGTTCAT 58.311 43.478 0.00 0.00 34.19 2.57
5273 6000 4.127918 TCTCCTCTCAAACCCTAGTTCA 57.872 45.455 0.00 0.00 34.19 3.18
5274 6001 4.141824 CCATCTCCTCTCAAACCCTAGTTC 60.142 50.000 0.00 0.00 34.19 3.01
5275 6002 3.777522 CCATCTCCTCTCAAACCCTAGTT 59.222 47.826 0.00 0.00 38.03 2.24
5276 6003 3.246167 ACCATCTCCTCTCAAACCCTAGT 60.246 47.826 0.00 0.00 0.00 2.57
5277 6004 3.133721 CACCATCTCCTCTCAAACCCTAG 59.866 52.174 0.00 0.00 0.00 3.02
5278 6005 3.107601 CACCATCTCCTCTCAAACCCTA 58.892 50.000 0.00 0.00 0.00 3.53
5279 6006 1.912043 CACCATCTCCTCTCAAACCCT 59.088 52.381 0.00 0.00 0.00 4.34
5280 6007 1.630878 ACACCATCTCCTCTCAAACCC 59.369 52.381 0.00 0.00 0.00 4.11
5281 6008 3.077359 CAACACCATCTCCTCTCAAACC 58.923 50.000 0.00 0.00 0.00 3.27
5282 6009 3.077359 CCAACACCATCTCCTCTCAAAC 58.923 50.000 0.00 0.00 0.00 2.93
5283 6010 2.711009 ACCAACACCATCTCCTCTCAAA 59.289 45.455 0.00 0.00 0.00 2.69
5284 6011 2.338809 ACCAACACCATCTCCTCTCAA 58.661 47.619 0.00 0.00 0.00 3.02
5285 6012 2.030027 ACCAACACCATCTCCTCTCA 57.970 50.000 0.00 0.00 0.00 3.27
5286 6013 2.303022 TCAACCAACACCATCTCCTCTC 59.697 50.000 0.00 0.00 0.00 3.20
5287 6014 2.338809 TCAACCAACACCATCTCCTCT 58.661 47.619 0.00 0.00 0.00 3.69
5288 6015 2.859165 TCAACCAACACCATCTCCTC 57.141 50.000 0.00 0.00 0.00 3.71
5289 6016 4.228210 ACATATCAACCAACACCATCTCCT 59.772 41.667 0.00 0.00 0.00 3.69
5290 6017 4.526970 ACATATCAACCAACACCATCTCC 58.473 43.478 0.00 0.00 0.00 3.71
5291 6018 5.647658 TCAACATATCAACCAACACCATCTC 59.352 40.000 0.00 0.00 0.00 2.75
5292 6019 5.569355 TCAACATATCAACCAACACCATCT 58.431 37.500 0.00 0.00 0.00 2.90
5293 6020 5.895636 TCAACATATCAACCAACACCATC 57.104 39.130 0.00 0.00 0.00 3.51
5294 6021 5.951148 TCATCAACATATCAACCAACACCAT 59.049 36.000 0.00 0.00 0.00 3.55
5295 6022 5.320277 TCATCAACATATCAACCAACACCA 58.680 37.500 0.00 0.00 0.00 4.17
5296 6023 5.895636 TCATCAACATATCAACCAACACC 57.104 39.130 0.00 0.00 0.00 4.16
5297 6024 7.144722 TCTTCATCAACATATCAACCAACAC 57.855 36.000 0.00 0.00 0.00 3.32
5298 6025 7.943079 ATCTTCATCAACATATCAACCAACA 57.057 32.000 0.00 0.00 0.00 3.33
5299 6026 8.461222 TCAATCTTCATCAACATATCAACCAAC 58.539 33.333 0.00 0.00 0.00 3.77
5300 6027 8.461222 GTCAATCTTCATCAACATATCAACCAA 58.539 33.333 0.00 0.00 0.00 3.67
5301 6028 7.067372 GGTCAATCTTCATCAACATATCAACCA 59.933 37.037 0.00 0.00 0.00 3.67
5302 6029 7.420800 GGTCAATCTTCATCAACATATCAACC 58.579 38.462 0.00 0.00 0.00 3.77
5303 6030 7.284034 AGGGTCAATCTTCATCAACATATCAAC 59.716 37.037 0.00 0.00 0.00 3.18
5304 6031 7.348815 AGGGTCAATCTTCATCAACATATCAA 58.651 34.615 0.00 0.00 0.00 2.57
5305 6032 6.903516 AGGGTCAATCTTCATCAACATATCA 58.096 36.000 0.00 0.00 0.00 2.15
5306 6033 6.429385 GGAGGGTCAATCTTCATCAACATATC 59.571 42.308 0.00 0.00 0.00 1.63
5307 6034 6.302269 GGAGGGTCAATCTTCATCAACATAT 58.698 40.000 0.00 0.00 0.00 1.78
5308 6035 5.397899 GGGAGGGTCAATCTTCATCAACATA 60.398 44.000 0.00 0.00 0.00 2.29
5309 6036 4.530875 GGAGGGTCAATCTTCATCAACAT 58.469 43.478 0.00 0.00 0.00 2.71
5310 6037 3.308402 GGGAGGGTCAATCTTCATCAACA 60.308 47.826 0.00 0.00 0.00 3.33
5311 6038 3.054065 AGGGAGGGTCAATCTTCATCAAC 60.054 47.826 0.00 0.00 0.00 3.18
5312 6039 3.192944 AGGGAGGGTCAATCTTCATCAA 58.807 45.455 0.00 0.00 0.00 2.57
5313 6040 2.774234 GAGGGAGGGTCAATCTTCATCA 59.226 50.000 0.00 0.00 0.00 3.07
5314 6041 2.224161 CGAGGGAGGGTCAATCTTCATC 60.224 54.545 0.00 0.00 0.00 2.92
5315 6042 1.765314 CGAGGGAGGGTCAATCTTCAT 59.235 52.381 0.00 0.00 0.00 2.57
5316 6043 1.195115 CGAGGGAGGGTCAATCTTCA 58.805 55.000 0.00 0.00 0.00 3.02
5317 6044 1.486211 TCGAGGGAGGGTCAATCTTC 58.514 55.000 0.00 0.00 0.00 2.87
5318 6045 1.765314 CATCGAGGGAGGGTCAATCTT 59.235 52.381 0.00 0.00 0.00 2.40
5319 6046 1.062886 TCATCGAGGGAGGGTCAATCT 60.063 52.381 0.00 0.00 0.00 2.40
5320 6047 1.414158 TCATCGAGGGAGGGTCAATC 58.586 55.000 0.00 0.00 0.00 2.67
5321 6048 2.109229 ATCATCGAGGGAGGGTCAAT 57.891 50.000 0.00 0.00 0.00 2.57
5322 6049 2.598565 CTATCATCGAGGGAGGGTCAA 58.401 52.381 0.00 0.00 0.00 3.18
5323 6050 1.203063 CCTATCATCGAGGGAGGGTCA 60.203 57.143 10.13 0.00 0.00 4.02
5324 6051 1.075698 TCCTATCATCGAGGGAGGGTC 59.924 57.143 15.84 0.00 34.56 4.46
5325 6052 1.158904 TCCTATCATCGAGGGAGGGT 58.841 55.000 15.84 0.00 34.56 4.34
5326 6053 2.383855 GATCCTATCATCGAGGGAGGG 58.616 57.143 15.84 10.55 34.56 4.30
5335 6062 4.926238 GTCATCACCAACGATCCTATCATC 59.074 45.833 0.00 0.00 0.00 2.92
5336 6063 4.559502 CGTCATCACCAACGATCCTATCAT 60.560 45.833 0.00 0.00 41.29 2.45
5337 6064 3.243401 CGTCATCACCAACGATCCTATCA 60.243 47.826 0.00 0.00 41.29 2.15
5338 6065 3.004419 TCGTCATCACCAACGATCCTATC 59.996 47.826 0.00 0.00 42.49 2.08
5339 6066 2.956333 TCGTCATCACCAACGATCCTAT 59.044 45.455 0.00 0.00 42.49 2.57
5340 6067 2.371306 TCGTCATCACCAACGATCCTA 58.629 47.619 0.00 0.00 42.49 2.94
5341 6068 1.182667 TCGTCATCACCAACGATCCT 58.817 50.000 0.00 0.00 42.49 3.24
5342 6069 3.733236 TCGTCATCACCAACGATCC 57.267 52.632 0.00 0.00 42.49 3.36
5346 6073 0.740868 AGCCATCGTCATCACCAACG 60.741 55.000 0.00 0.00 40.17 4.10
5347 6074 1.398390 GAAGCCATCGTCATCACCAAC 59.602 52.381 0.00 0.00 0.00 3.77
5348 6075 1.737838 GAAGCCATCGTCATCACCAA 58.262 50.000 0.00 0.00 0.00 3.67
5349 6076 0.460109 CGAAGCCATCGTCATCACCA 60.460 55.000 1.56 0.00 46.52 4.17
5350 6077 2.301505 CGAAGCCATCGTCATCACC 58.698 57.895 1.56 0.00 46.52 4.02
5359 6086 0.183731 AGGGGGAAATCGAAGCCATC 59.816 55.000 0.00 0.00 0.00 3.51
5360 6087 0.183731 GAGGGGGAAATCGAAGCCAT 59.816 55.000 0.00 0.00 0.00 4.40
5361 6088 1.607612 GAGGGGGAAATCGAAGCCA 59.392 57.895 0.00 0.00 0.00 4.75
5362 6089 1.152943 GGAGGGGGAAATCGAAGCC 60.153 63.158 0.00 0.00 0.00 4.35
5363 6090 1.152943 GGGAGGGGGAAATCGAAGC 60.153 63.158 0.00 0.00 0.00 3.86
5364 6091 1.146263 CGGGAGGGGGAAATCGAAG 59.854 63.158 0.00 0.00 0.00 3.79
5365 6092 3.316029 CGGGAGGGGGAAATCGAA 58.684 61.111 0.00 0.00 0.00 3.71
5386 6113 0.323451 ATTCTGCCGGGGAAACTTCC 60.323 55.000 2.18 0.00 46.82 3.46
5387 6114 2.289565 CTATTCTGCCGGGGAAACTTC 58.710 52.381 2.18 0.00 0.00 3.01
5388 6115 1.682087 GCTATTCTGCCGGGGAAACTT 60.682 52.381 2.18 0.00 0.00 2.66
5389 6116 0.107165 GCTATTCTGCCGGGGAAACT 60.107 55.000 2.18 0.00 0.00 2.66
5390 6117 0.107165 AGCTATTCTGCCGGGGAAAC 60.107 55.000 2.18 0.00 0.00 2.78
5391 6118 0.180406 GAGCTATTCTGCCGGGGAAA 59.820 55.000 2.18 0.00 0.00 3.13
5392 6119 1.696097 GGAGCTATTCTGCCGGGGAA 61.696 60.000 2.18 0.00 0.00 3.97
5393 6120 2.140792 GGAGCTATTCTGCCGGGGA 61.141 63.158 2.18 0.00 0.00 4.81
5394 6121 2.427753 GGAGCTATTCTGCCGGGG 59.572 66.667 2.18 0.00 0.00 5.73
5395 6122 2.029666 CGGAGCTATTCTGCCGGG 59.970 66.667 2.18 0.00 40.08 5.73
5409 6136 3.751049 AATCTAGGGCTCCGGCGGA 62.751 63.158 29.14 29.14 39.81 5.54
5410 6137 3.234730 AATCTAGGGCTCCGGCGG 61.235 66.667 22.51 22.51 39.81 6.13
5411 6138 2.029666 CAATCTAGGGCTCCGGCG 59.970 66.667 0.00 0.00 39.81 6.46
5412 6139 2.281139 GCAATCTAGGGCTCCGGC 60.281 66.667 0.00 0.00 37.82 6.13
5413 6140 0.250081 GAAGCAATCTAGGGCTCCGG 60.250 60.000 0.00 0.00 40.01 5.14
5414 6141 0.755686 AGAAGCAATCTAGGGCTCCG 59.244 55.000 5.20 0.00 40.01 4.63
5415 6142 1.813477 GCAGAAGCAATCTAGGGCTCC 60.813 57.143 5.20 0.00 40.01 4.70
5416 6143 1.592064 GCAGAAGCAATCTAGGGCTC 58.408 55.000 5.20 0.00 40.01 4.70
5417 6144 0.182299 GGCAGAAGCAATCTAGGGCT 59.818 55.000 0.00 0.00 44.61 5.19
5418 6145 0.821301 GGGCAGAAGCAATCTAGGGC 60.821 60.000 0.00 0.00 44.61 5.19
5419 6146 0.548031 TGGGCAGAAGCAATCTAGGG 59.452 55.000 0.00 0.00 44.61 3.53
5420 6147 2.295885 CTTGGGCAGAAGCAATCTAGG 58.704 52.381 0.00 0.00 44.61 3.02
5421 6148 2.996631 ACTTGGGCAGAAGCAATCTAG 58.003 47.619 0.00 0.00 44.61 2.43
5422 6149 3.347216 GAACTTGGGCAGAAGCAATCTA 58.653 45.455 0.00 0.00 44.61 1.98
5423 6150 2.165998 GAACTTGGGCAGAAGCAATCT 58.834 47.619 0.00 0.00 44.61 2.40
5424 6151 1.203287 GGAACTTGGGCAGAAGCAATC 59.797 52.381 0.00 0.00 44.61 2.67
5425 6152 1.260544 GGAACTTGGGCAGAAGCAAT 58.739 50.000 0.00 0.00 44.61 3.56
5426 6153 2.732289 GGAACTTGGGCAGAAGCAA 58.268 52.632 0.00 0.00 44.61 3.91
5427 6154 4.500265 GGAACTTGGGCAGAAGCA 57.500 55.556 0.00 0.00 44.61 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.