Multiple sequence alignment - TraesCS5D01G089400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G089400 chr5D 100.000 2904 0 0 1 2904 96250520 96247617 0.000000e+00 5363.0
1 TraesCS5D01G089400 chr5D 89.091 770 71 3 1052 1808 96336900 96336131 0.000000e+00 944.0
2 TraesCS5D01G089400 chr5D 81.379 290 34 8 353 642 96250096 96249827 4.870000e-53 219.0
3 TraesCS5D01G089400 chr5D 81.379 290 34 8 425 694 96250168 96249879 4.870000e-53 219.0
4 TraesCS5D01G089400 chr2A 92.549 859 60 2 4 858 717884445 717883587 0.000000e+00 1229.0
5 TraesCS5D01G089400 chr2A 79.381 291 39 13 353 642 717884021 717883751 4.940000e-43 185.0
6 TraesCS5D01G089400 chr2A 82.192 219 28 8 415 622 293845782 293845564 8.270000e-41 178.0
7 TraesCS5D01G089400 chr2A 83.799 179 24 5 541 716 462569393 462569217 6.440000e-37 165.0
8 TraesCS5D01G089400 chr2A 89.855 69 7 0 479 547 277608318 277608250 3.990000e-14 89.8
9 TraesCS5D01G089400 chr5B 93.995 766 45 1 1041 1805 102887233 102886468 0.000000e+00 1158.0
10 TraesCS5D01G089400 chr5B 88.457 927 83 10 1038 1951 102906933 102906018 0.000000e+00 1098.0
11 TraesCS5D01G089400 chr5B 89.514 782 64 5 1028 1809 102741873 102741110 0.000000e+00 974.0
12 TraesCS5D01G089400 chr5B 73.919 740 118 45 2004 2733 102740858 102740184 8.100000e-56 228.0
13 TraesCS5D01G089400 chr5B 75.717 453 60 28 2045 2489 102886123 102885713 6.390000e-42 182.0
14 TraesCS5D01G089400 chr5A 87.812 960 67 22 1038 1951 91625423 91624468 0.000000e+00 1079.0
15 TraesCS5D01G089400 chr5A 87.209 860 89 9 1020 1878 91550045 91549206 0.000000e+00 959.0
16 TraesCS5D01G089400 chr5A 87.825 616 72 2 1956 2568 91522992 91522377 0.000000e+00 719.0
17 TraesCS5D01G089400 chr5A 73.609 701 111 39 2004 2695 91624388 91623753 4.910000e-48 202.0
18 TraesCS5D01G089400 chr5A 91.034 145 10 2 878 1022 91553123 91552982 2.950000e-45 193.0
19 TraesCS5D01G089400 chr5A 79.757 247 44 6 615 858 310721844 310722087 1.070000e-39 174.0
20 TraesCS5D01G089400 chr5A 84.358 179 23 5 541 716 680470725 680470549 1.380000e-38 171.0
21 TraesCS5D01G089400 chr5A 91.803 122 9 1 2563 2684 91357441 91357321 4.980000e-38 169.0
22 TraesCS5D01G089400 chr6B 91.993 587 42 3 66 649 125812078 125811494 0.000000e+00 819.0
23 TraesCS5D01G089400 chr6B 91.346 208 18 0 645 852 125732350 125732143 4.740000e-73 285.0
24 TraesCS5D01G089400 chr2D 93.781 402 22 1 4 402 569955189 569954788 4.140000e-168 601.0
25 TraesCS5D01G089400 chr2D 76.449 276 46 12 469 737 613449257 613448994 6.530000e-27 132.0
26 TraesCS5D01G089400 chr4D 85.757 337 37 6 4 334 494423796 494423465 2.140000e-91 346.0
27 TraesCS5D01G089400 chr4D 81.690 213 29 9 486 694 477025281 477025075 4.980000e-38 169.0
28 TraesCS5D01G089400 chrUn 81.350 311 50 8 552 858 94992219 94991913 2.240000e-61 246.0
29 TraesCS5D01G089400 chr3B 78.788 297 54 9 566 858 792746045 792746336 1.060000e-44 191.0
30 TraesCS5D01G089400 chr3A 83.333 198 25 8 541 734 368656409 368656216 2.970000e-40 176.0
31 TraesCS5D01G089400 chr7D 79.771 262 35 14 377 622 162810895 162810636 1.070000e-39 174.0
32 TraesCS5D01G089400 chr7D 78.800 250 31 18 503 745 617978336 617978102 6.480000e-32 148.0
33 TraesCS5D01G089400 chr7A 78.277 267 41 12 422 686 3959135 3959386 3.870000e-34 156.0
34 TraesCS5D01G089400 chr7A 76.329 207 33 8 542 734 37728593 37728797 2.380000e-16 97.1
35 TraesCS5D01G089400 chr3D 78.733 221 41 5 476 694 577026931 577027147 3.020000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G089400 chr5D 96247617 96250520 2903 True 1933.666667 5363 87.5860 1 2904 3 chr5D.!!$R2 2903
1 TraesCS5D01G089400 chr5D 96336131 96336900 769 True 944.000000 944 89.0910 1052 1808 1 chr5D.!!$R1 756
2 TraesCS5D01G089400 chr2A 717883587 717884445 858 True 707.000000 1229 85.9650 4 858 2 chr2A.!!$R4 854
3 TraesCS5D01G089400 chr5B 102906018 102906933 915 True 1098.000000 1098 88.4570 1038 1951 1 chr5B.!!$R1 913
4 TraesCS5D01G089400 chr5B 102885713 102887233 1520 True 670.000000 1158 84.8560 1041 2489 2 chr5B.!!$R3 1448
5 TraesCS5D01G089400 chr5B 102740184 102741873 1689 True 601.000000 974 81.7165 1028 2733 2 chr5B.!!$R2 1705
6 TraesCS5D01G089400 chr5A 91522377 91522992 615 True 719.000000 719 87.8250 1956 2568 1 chr5A.!!$R2 612
7 TraesCS5D01G089400 chr5A 91623753 91625423 1670 True 640.500000 1079 80.7105 1038 2695 2 chr5A.!!$R5 1657
8 TraesCS5D01G089400 chr5A 91549206 91553123 3917 True 576.000000 959 89.1215 878 1878 2 chr5A.!!$R4 1000
9 TraesCS5D01G089400 chr6B 125811494 125812078 584 True 819.000000 819 91.9930 66 649 1 chr6B.!!$R2 583

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
641 645 0.026803 CGCCGAAGTTGCAATAGAGC 59.973 55.0 0.59 1.8 0.0 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2149 5662 0.109781 CCAAAACGAAGCATGACGGG 60.11 55.0 0.0 0.0 0.0 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 1.131303 ATTTCTCACCCACCGGACCA 61.131 55.000 9.46 0.00 0.00 4.02
102 106 0.470456 ACACCACGTACCTCTCCCAA 60.470 55.000 0.00 0.00 0.00 4.12
111 115 0.257039 ACCTCTCCCAACCATCATGC 59.743 55.000 0.00 0.00 0.00 4.06
117 121 0.108520 CCCAACCATCATGCAGCAAC 60.109 55.000 0.00 0.00 0.00 4.17
124 128 1.028330 ATCATGCAGCAACCTCCACG 61.028 55.000 0.00 0.00 0.00 4.94
125 129 2.360350 ATGCAGCAACCTCCACGG 60.360 61.111 0.00 0.00 39.35 4.94
174 178 0.247736 CTCCCACGCATATCCTAGGC 59.752 60.000 2.96 0.00 0.00 3.93
181 185 1.797025 GCATATCCTAGGCGGTCAAC 58.203 55.000 2.96 0.00 0.00 3.18
245 249 1.369625 CAACGTAGCAACTCATCCCC 58.630 55.000 0.00 0.00 0.00 4.81
250 254 2.739932 CGTAGCAACTCATCCCCAGAAG 60.740 54.545 0.00 0.00 0.00 2.85
253 257 0.745845 CAACTCATCCCCAGAAGCCG 60.746 60.000 0.00 0.00 0.00 5.52
270 274 2.956987 GTGCTGCGATGCAACCTT 59.043 55.556 4.40 0.00 45.12 3.50
272 276 2.180017 GCTGCGATGCAACCTTGG 59.820 61.111 0.00 0.00 38.41 3.61
304 308 4.025401 GTTGCAAGTCGTGGGCGG 62.025 66.667 0.00 0.00 38.89 6.13
323 327 2.817423 CGGAGCTTCAATGGAGCGC 61.817 63.158 8.85 8.85 0.00 5.92
325 329 1.435408 GGAGCTTCAATGGAGCGCTC 61.435 60.000 29.38 29.38 42.70 5.03
369 373 2.460662 ATCAGCGGCTGCAGTGAAGT 62.461 55.000 24.78 0.00 46.23 3.01
385 389 0.465460 AAGTTCAGGCGGAGTTGCAA 60.465 50.000 0.00 0.00 36.28 4.08
386 390 0.465460 AGTTCAGGCGGAGTTGCAAA 60.465 50.000 0.00 0.00 36.28 3.68
387 391 0.040067 GTTCAGGCGGAGTTGCAAAG 60.040 55.000 0.00 0.00 36.28 2.77
388 392 1.795170 TTCAGGCGGAGTTGCAAAGC 61.795 55.000 0.00 4.76 36.28 3.51
389 393 2.203337 AGGCGGAGTTGCAAAGCA 60.203 55.556 0.00 0.00 36.47 3.91
390 394 2.256461 GGCGGAGTTGCAAAGCAG 59.744 61.111 0.00 0.00 40.61 4.24
391 395 2.429739 GCGGAGTTGCAAAGCAGC 60.430 61.111 0.00 4.86 40.61 5.25
397 401 2.788535 GTTGCAAAGCAGCTTCGAC 58.211 52.632 8.48 3.26 40.61 4.20
398 402 0.993746 GTTGCAAAGCAGCTTCGACG 60.994 55.000 8.48 0.00 40.61 5.12
399 403 2.116736 TTGCAAAGCAGCTTCGACGG 62.117 55.000 8.48 0.00 40.61 4.79
400 404 2.317609 GCAAAGCAGCTTCGACGGA 61.318 57.895 8.48 0.00 0.00 4.69
401 405 1.784062 CAAAGCAGCTTCGACGGAG 59.216 57.895 8.48 0.00 0.00 4.63
402 406 2.029844 AAAGCAGCTTCGACGGAGC 61.030 57.895 20.84 20.84 0.00 4.70
403 407 3.941657 AAGCAGCTTCGACGGAGCC 62.942 63.158 24.42 10.34 0.00 4.70
404 408 4.742201 GCAGCTTCGACGGAGCCA 62.742 66.667 24.42 0.00 0.00 4.75
405 409 2.185350 CAGCTTCGACGGAGCCAT 59.815 61.111 24.42 4.08 0.00 4.40
406 410 1.880340 CAGCTTCGACGGAGCCATC 60.880 63.158 24.42 0.00 0.00 3.51
407 411 2.956964 GCTTCGACGGAGCCATCG 60.957 66.667 17.75 0.00 39.72 3.84
408 412 2.956964 CTTCGACGGAGCCATCGC 60.957 66.667 0.00 0.00 38.24 4.58
409 413 4.508128 TTCGACGGAGCCATCGCC 62.508 66.667 0.00 0.00 38.24 5.54
420 424 4.933064 CATCGCCCGTCGGAGCTC 62.933 72.222 14.39 4.71 39.05 4.09
426 430 4.504916 CCGTCGGAGCTCTGCCAG 62.505 72.222 18.28 10.69 0.00 4.85
427 431 4.504916 CGTCGGAGCTCTGCCAGG 62.505 72.222 18.28 3.65 0.00 4.45
428 432 4.154347 GTCGGAGCTCTGCCAGGG 62.154 72.222 18.28 0.00 0.00 4.45
431 435 4.486503 GGAGCTCTGCCAGGGCTG 62.487 72.222 26.77 11.35 42.51 4.85
435 439 2.044252 CTCTGCCAGGGCTGCAAT 60.044 61.111 12.19 0.00 42.51 3.56
436 440 1.681327 CTCTGCCAGGGCTGCAATT 60.681 57.895 12.19 0.00 42.51 2.32
437 441 0.394762 CTCTGCCAGGGCTGCAATTA 60.395 55.000 12.19 0.00 42.51 1.40
438 442 0.039472 TCTGCCAGGGCTGCAATTAA 59.961 50.000 12.19 0.00 42.51 1.40
439 443 0.458669 CTGCCAGGGCTGCAATTAAG 59.541 55.000 12.19 0.00 42.51 1.85
440 444 0.039472 TGCCAGGGCTGCAATTAAGA 59.961 50.000 12.19 0.00 42.51 2.10
441 445 1.342275 TGCCAGGGCTGCAATTAAGAT 60.342 47.619 12.19 0.00 42.51 2.40
442 446 1.339291 GCCAGGGCTGCAATTAAGATC 59.661 52.381 2.30 0.00 38.26 2.75
443 447 1.605710 CCAGGGCTGCAATTAAGATCG 59.394 52.381 0.50 0.00 0.00 3.69
444 448 2.564771 CAGGGCTGCAATTAAGATCGA 58.435 47.619 0.50 0.00 0.00 3.59
445 449 2.289002 CAGGGCTGCAATTAAGATCGAC 59.711 50.000 0.50 0.00 0.00 4.20
446 450 1.604278 GGGCTGCAATTAAGATCGACC 59.396 52.381 0.50 0.00 0.00 4.79
447 451 1.261619 GGCTGCAATTAAGATCGACCG 59.738 52.381 0.50 0.00 0.00 4.79
448 452 1.261619 GCTGCAATTAAGATCGACCGG 59.738 52.381 0.00 0.00 0.00 5.28
449 453 2.821546 CTGCAATTAAGATCGACCGGA 58.178 47.619 9.46 0.00 0.00 5.14
450 454 2.797156 CTGCAATTAAGATCGACCGGAG 59.203 50.000 9.46 0.85 0.00 4.63
451 455 2.429250 TGCAATTAAGATCGACCGGAGA 59.571 45.455 9.46 7.81 0.00 3.71
452 456 3.069586 TGCAATTAAGATCGACCGGAGAT 59.930 43.478 9.46 13.10 0.00 2.75
453 457 3.430218 GCAATTAAGATCGACCGGAGATG 59.570 47.826 18.85 7.95 0.00 2.90
454 458 2.795175 TTAAGATCGACCGGAGATGC 57.205 50.000 18.85 11.68 0.00 3.91
455 459 1.687563 TAAGATCGACCGGAGATGCA 58.312 50.000 18.85 0.00 0.00 3.96
456 460 0.824109 AAGATCGACCGGAGATGCAA 59.176 50.000 18.85 0.00 0.00 4.08
457 461 0.824109 AGATCGACCGGAGATGCAAA 59.176 50.000 18.85 0.00 0.00 3.68
458 462 1.202463 AGATCGACCGGAGATGCAAAG 60.202 52.381 18.85 0.00 0.00 2.77
459 463 0.811616 ATCGACCGGAGATGCAAAGC 60.812 55.000 9.46 0.00 0.00 3.51
460 464 1.741401 CGACCGGAGATGCAAAGCA 60.741 57.895 9.46 0.00 44.86 3.91
461 465 1.699656 CGACCGGAGATGCAAAGCAG 61.700 60.000 9.46 0.00 43.65 4.24
462 466 1.986575 GACCGGAGATGCAAAGCAGC 61.987 60.000 9.46 0.00 45.98 5.25
468 472 3.302968 GATGCAAAGCAGCTTCGTC 57.697 52.632 8.48 4.22 43.65 4.20
469 473 0.519999 GATGCAAAGCAGCTTCGTCG 60.520 55.000 8.48 0.00 43.65 5.12
470 474 1.915614 ATGCAAAGCAGCTTCGTCGG 61.916 55.000 8.48 0.00 43.65 4.79
471 475 2.317609 GCAAAGCAGCTTCGTCGGA 61.318 57.895 8.48 0.00 0.00 4.55
472 476 1.784062 CAAAGCAGCTTCGTCGGAG 59.216 57.895 8.48 0.00 0.00 4.63
473 477 2.029844 AAAGCAGCTTCGTCGGAGC 61.030 57.895 18.22 18.22 0.00 4.70
474 478 3.941657 AAGCAGCTTCGTCGGAGCC 62.942 63.158 22.01 7.78 0.00 4.70
476 480 4.421479 CAGCTTCGTCGGAGCCGT 62.421 66.667 22.01 1.15 40.74 5.68
477 481 4.117661 AGCTTCGTCGGAGCCGTC 62.118 66.667 22.01 2.28 40.74 4.79
479 483 4.831307 CTTCGTCGGAGCCGTCGG 62.831 72.222 23.55 6.99 46.88 4.79
499 503 2.124819 CTCTGCCGGAGCTGCAAT 60.125 61.111 5.05 0.00 38.46 3.56
500 504 2.437180 TCTGCCGGAGCTGCAATG 60.437 61.111 5.05 0.00 38.46 2.82
501 505 2.437180 CTGCCGGAGCTGCAATGA 60.437 61.111 5.05 0.00 38.46 2.57
502 506 2.033911 TGCCGGAGCTGCAATGAA 59.966 55.556 5.05 0.00 40.80 2.57
503 507 1.989966 CTGCCGGAGCTGCAATGAAG 61.990 60.000 5.05 0.00 38.46 3.02
504 508 2.796651 CCGGAGCTGCAATGAAGC 59.203 61.111 4.73 4.73 41.15 3.86
509 513 2.101770 GCTGCAATGAAGCTCGGC 59.898 61.111 5.84 0.00 37.69 5.54
510 514 2.796651 CTGCAATGAAGCTCGGCC 59.203 61.111 0.00 0.00 34.99 6.13
511 515 3.104602 CTGCAATGAAGCTCGGCCG 62.105 63.158 22.12 22.12 34.99 6.13
512 516 3.880846 GCAATGAAGCTCGGCCGG 61.881 66.667 27.83 17.41 0.00 6.13
513 517 2.125147 CAATGAAGCTCGGCCGGA 60.125 61.111 27.83 11.38 0.00 5.14
514 518 2.176273 CAATGAAGCTCGGCCGGAG 61.176 63.158 27.83 21.43 46.06 4.63
515 519 2.660064 AATGAAGCTCGGCCGGAGT 61.660 57.895 27.83 8.42 45.03 3.85
516 520 2.185310 AATGAAGCTCGGCCGGAGTT 62.185 55.000 27.83 16.21 45.03 3.01
517 521 2.815647 GAAGCTCGGCCGGAGTTG 60.816 66.667 27.83 11.65 45.03 3.16
521 525 2.436646 CTCGGCCGGAGTTGCAAT 60.437 61.111 27.83 0.00 38.02 3.56
522 526 2.745884 TCGGCCGGAGTTGCAATG 60.746 61.111 27.83 0.00 0.00 2.82
523 527 3.814268 CGGCCGGAGTTGCAATGG 61.814 66.667 20.10 3.96 0.00 3.16
524 528 2.361104 GGCCGGAGTTGCAATGGA 60.361 61.111 5.05 0.00 0.00 3.41
525 529 2.409870 GGCCGGAGTTGCAATGGAG 61.410 63.158 5.05 0.00 0.00 3.86
526 530 3.056313 GCCGGAGTTGCAATGGAGC 62.056 63.158 5.05 0.00 0.00 4.70
527 531 1.377725 CCGGAGTTGCAATGGAGCT 60.378 57.895 0.59 0.00 34.99 4.09
528 532 0.962356 CCGGAGTTGCAATGGAGCTT 60.962 55.000 0.59 0.00 34.99 3.74
529 533 0.449388 CGGAGTTGCAATGGAGCTTC 59.551 55.000 0.59 0.00 34.99 3.86
530 534 0.449388 GGAGTTGCAATGGAGCTTCG 59.551 55.000 0.59 0.00 34.99 3.79
531 535 0.179179 GAGTTGCAATGGAGCTTCGC 60.179 55.000 0.59 0.00 34.99 4.70
532 536 1.153958 GTTGCAATGGAGCTTCGCC 60.154 57.895 0.59 0.00 34.99 5.54
533 537 2.689785 TTGCAATGGAGCTTCGCCG 61.690 57.895 0.00 0.00 34.99 6.46
534 538 3.880846 GCAATGGAGCTTCGCCGG 61.881 66.667 0.00 0.00 0.00 6.13
535 539 2.125147 CAATGGAGCTTCGCCGGA 60.125 61.111 5.05 0.00 0.00 5.14
536 540 2.176273 CAATGGAGCTTCGCCGGAG 61.176 63.158 5.05 0.00 0.00 4.63
537 541 4.537433 ATGGAGCTTCGCCGGAGC 62.537 66.667 10.01 10.01 0.00 4.70
562 566 4.809496 CTCTGCCGGGGCTGCAAT 62.809 66.667 11.55 0.00 42.51 3.56
565 569 4.675161 TGCCGGGGCTGCAATGAA 62.675 61.111 11.55 0.00 42.51 2.57
566 570 3.830192 GCCGGGGCTGCAATGAAG 61.830 66.667 2.18 0.00 38.26 3.02
567 571 3.830192 CCGGGGCTGCAATGAAGC 61.830 66.667 4.20 4.20 40.06 3.86
568 572 2.753043 CGGGGCTGCAATGAAGCT 60.753 61.111 13.67 0.00 40.64 3.74
569 573 2.768492 CGGGGCTGCAATGAAGCTC 61.768 63.158 13.67 9.23 40.64 4.09
570 574 2.768492 GGGGCTGCAATGAAGCTCG 61.768 63.158 13.67 0.00 42.41 5.03
571 575 1.746615 GGGCTGCAATGAAGCTCGA 60.747 57.895 13.67 0.00 40.64 4.04
572 576 1.427020 GGCTGCAATGAAGCTCGAC 59.573 57.895 13.67 0.00 40.64 4.20
573 577 1.427020 GCTGCAATGAAGCTCGACC 59.573 57.895 5.84 0.00 37.69 4.79
574 578 1.712081 CTGCAATGAAGCTCGACCG 59.288 57.895 0.00 0.00 34.99 4.79
575 579 1.699656 CTGCAATGAAGCTCGACCGG 61.700 60.000 0.00 0.00 34.99 5.28
576 580 1.447838 GCAATGAAGCTCGACCGGA 60.448 57.895 9.46 0.00 0.00 5.14
577 581 1.424493 GCAATGAAGCTCGACCGGAG 61.424 60.000 9.46 0.85 46.06 4.63
578 582 0.108615 CAATGAAGCTCGACCGGAGT 60.109 55.000 9.46 0.00 45.03 3.85
579 583 0.608640 AATGAAGCTCGACCGGAGTT 59.391 50.000 9.46 0.00 45.03 3.01
580 584 0.108615 ATGAAGCTCGACCGGAGTTG 60.109 55.000 9.46 0.00 45.03 3.16
581 585 2.048127 AAGCTCGACCGGAGTTGC 60.048 61.111 9.46 7.35 45.03 4.17
582 586 2.765250 GAAGCTCGACCGGAGTTGCA 62.765 60.000 9.46 0.00 45.03 4.08
583 587 2.357034 GCTCGACCGGAGTTGCAA 60.357 61.111 9.46 0.00 45.03 4.08
584 588 1.741770 GCTCGACCGGAGTTGCAAT 60.742 57.895 9.46 0.00 45.03 3.56
585 589 1.970917 GCTCGACCGGAGTTGCAATG 61.971 60.000 9.46 0.00 45.03 2.82
586 590 1.361668 CTCGACCGGAGTTGCAATGG 61.362 60.000 9.46 5.42 38.02 3.16
587 591 1.375396 CGACCGGAGTTGCAATGGA 60.375 57.895 9.46 0.00 0.00 3.41
588 592 1.361668 CGACCGGAGTTGCAATGGAG 61.362 60.000 9.46 0.00 0.00 3.86
589 593 1.648467 GACCGGAGTTGCAATGGAGC 61.648 60.000 9.46 0.00 0.00 4.70
590 594 1.377725 CCGGAGTTGCAATGGAGCT 60.378 57.895 0.59 0.00 34.99 4.09
591 595 0.962356 CCGGAGTTGCAATGGAGCTT 60.962 55.000 0.59 0.00 34.99 3.74
592 596 0.449388 CGGAGTTGCAATGGAGCTTC 59.551 55.000 0.59 0.00 34.99 3.86
593 597 0.449388 GGAGTTGCAATGGAGCTTCG 59.551 55.000 0.59 0.00 34.99 3.79
594 598 0.179179 GAGTTGCAATGGAGCTTCGC 60.179 55.000 0.59 0.00 34.99 4.70
595 599 1.153958 GTTGCAATGGAGCTTCGCC 60.154 57.895 0.59 0.00 34.99 5.54
596 600 2.689785 TTGCAATGGAGCTTCGCCG 61.690 57.895 0.00 0.00 34.99 6.46
597 601 3.880846 GCAATGGAGCTTCGCCGG 61.881 66.667 0.00 0.00 0.00 6.13
598 602 2.125147 CAATGGAGCTTCGCCGGA 60.125 61.111 5.05 0.00 0.00 5.14
599 603 2.176273 CAATGGAGCTTCGCCGGAG 61.176 63.158 5.05 0.00 0.00 4.63
600 604 2.660064 AATGGAGCTTCGCCGGAGT 61.660 57.895 5.05 0.00 0.00 3.85
601 605 2.859273 AATGGAGCTTCGCCGGAGTG 62.859 60.000 5.05 0.36 0.00 3.51
602 606 4.070552 GGAGCTTCGCCGGAGTGT 62.071 66.667 5.05 0.00 0.00 3.55
603 607 2.507324 GAGCTTCGCCGGAGTGTC 60.507 66.667 5.05 0.00 0.00 3.67
604 608 4.421479 AGCTTCGCCGGAGTGTCG 62.421 66.667 5.05 0.00 0.00 4.35
613 617 4.664677 GGAGTGTCGGTGCTGCGT 62.665 66.667 0.00 0.00 0.00 5.24
614 618 2.661866 GAGTGTCGGTGCTGCGTT 60.662 61.111 0.00 0.00 0.00 4.84
615 619 2.943345 GAGTGTCGGTGCTGCGTTG 61.943 63.158 0.00 0.00 0.00 4.10
616 620 4.012895 GTGTCGGTGCTGCGTTGG 62.013 66.667 0.00 0.00 0.00 3.77
617 621 4.228567 TGTCGGTGCTGCGTTGGA 62.229 61.111 0.00 0.00 0.00 3.53
618 622 3.414700 GTCGGTGCTGCGTTGGAG 61.415 66.667 0.00 0.00 0.00 3.86
621 625 3.426568 GGTGCTGCGTTGGAGCTC 61.427 66.667 4.71 4.71 37.35 4.09
622 626 3.426568 GTGCTGCGTTGGAGCTCC 61.427 66.667 26.78 26.78 37.35 4.70
628 632 4.735132 CGTTGGAGCTCCGCCGAA 62.735 66.667 29.88 16.78 39.43 4.30
629 633 2.815647 GTTGGAGCTCCGCCGAAG 60.816 66.667 27.43 0.00 39.43 3.79
630 634 3.311110 TTGGAGCTCCGCCGAAGT 61.311 61.111 27.43 0.00 39.43 3.01
631 635 2.879233 TTGGAGCTCCGCCGAAGTT 61.879 57.895 27.43 0.00 39.43 2.66
632 636 2.815647 GGAGCTCCGCCGAAGTTG 60.816 66.667 19.06 0.00 0.00 3.16
633 637 3.491652 GAGCTCCGCCGAAGTTGC 61.492 66.667 0.87 0.00 0.00 4.17
634 638 4.314440 AGCTCCGCCGAAGTTGCA 62.314 61.111 0.00 0.00 0.00 4.08
635 639 3.353836 GCTCCGCCGAAGTTGCAA 61.354 61.111 0.00 0.00 0.00 4.08
636 640 2.690778 GCTCCGCCGAAGTTGCAAT 61.691 57.895 0.59 0.00 0.00 3.56
637 641 1.366111 GCTCCGCCGAAGTTGCAATA 61.366 55.000 0.59 0.00 0.00 1.90
638 642 0.652592 CTCCGCCGAAGTTGCAATAG 59.347 55.000 0.59 0.00 0.00 1.73
639 643 0.248012 TCCGCCGAAGTTGCAATAGA 59.752 50.000 0.59 0.00 0.00 1.98
640 644 0.652592 CCGCCGAAGTTGCAATAGAG 59.347 55.000 0.59 0.00 0.00 2.43
641 645 0.026803 CGCCGAAGTTGCAATAGAGC 59.973 55.000 0.59 1.80 0.00 4.09
642 646 1.373570 GCCGAAGTTGCAATAGAGCT 58.626 50.000 0.59 0.00 34.99 4.09
643 647 1.740025 GCCGAAGTTGCAATAGAGCTT 59.260 47.619 0.59 0.00 34.99 3.74
644 648 2.223135 GCCGAAGTTGCAATAGAGCTTC 60.223 50.000 13.88 13.88 34.99 3.86
647 651 4.251960 GAAGTTGCAATAGAGCTTCGTC 57.748 45.455 0.59 0.00 34.99 4.20
648 652 2.263077 AGTTGCAATAGAGCTTCGTCG 58.737 47.619 0.59 0.00 34.99 5.12
649 653 1.324736 GTTGCAATAGAGCTTCGTCGG 59.675 52.381 0.59 0.00 34.99 4.79
650 654 0.815095 TGCAATAGAGCTTCGTCGGA 59.185 50.000 0.00 0.00 34.99 4.55
651 655 1.202302 TGCAATAGAGCTTCGTCGGAG 60.202 52.381 0.00 0.00 34.99 4.63
652 656 1.482278 CAATAGAGCTTCGTCGGAGC 58.518 55.000 18.22 18.22 0.00 4.70
653 657 0.029567 AATAGAGCTTCGTCGGAGCG 59.970 55.000 19.63 0.00 0.00 5.03
654 658 1.096386 ATAGAGCTTCGTCGGAGCGT 61.096 55.000 19.63 13.49 0.00 5.07
655 659 1.703438 TAGAGCTTCGTCGGAGCGTC 61.703 60.000 19.63 16.27 0.00 5.19
656 660 4.462417 AGCTTCGTCGGAGCGTCG 62.462 66.667 19.63 0.00 39.38 5.12
657 661 4.456253 GCTTCGTCGGAGCGTCGA 62.456 66.667 10.34 0.00 43.97 4.20
658 662 2.403987 CTTCGTCGGAGCGTCGAT 59.596 61.111 7.61 0.00 44.78 3.59
659 663 1.934956 CTTCGTCGGAGCGTCGATG 60.935 63.158 14.76 14.76 44.78 3.84
660 664 4.531912 TCGTCGGAGCGTCGATGC 62.532 66.667 22.11 22.11 41.46 3.91
670 674 3.554692 GTCGATGCCGCGTTGGAG 61.555 66.667 4.92 0.00 42.00 3.86
673 677 3.567797 GATGCCGCGTTGGAGCTC 61.568 66.667 4.71 4.71 42.00 4.09
710 714 3.814268 CCGGCCGGAATTGCAGTG 61.814 66.667 41.82 7.45 37.50 3.66
711 715 3.814268 CGGCCGGAATTGCAGTGG 61.814 66.667 20.10 0.00 0.00 4.00
712 716 2.361104 GGCCGGAATTGCAGTGGA 60.361 61.111 5.05 0.00 0.00 4.02
713 717 2.409870 GGCCGGAATTGCAGTGGAG 61.410 63.158 5.05 0.00 0.00 3.86
714 718 3.056313 GCCGGAATTGCAGTGGAGC 62.056 63.158 5.05 0.00 0.00 4.70
715 719 1.377725 CCGGAATTGCAGTGGAGCT 60.378 57.895 0.00 0.00 34.99 4.09
716 720 1.372087 CCGGAATTGCAGTGGAGCTC 61.372 60.000 4.71 4.71 34.99 4.09
717 721 1.699656 CGGAATTGCAGTGGAGCTCG 61.700 60.000 7.83 0.00 34.99 5.03
718 722 0.674895 GGAATTGCAGTGGAGCTCGT 60.675 55.000 7.83 0.00 34.99 4.18
719 723 0.723981 GAATTGCAGTGGAGCTCGTC 59.276 55.000 7.83 3.06 34.99 4.20
720 724 1.016130 AATTGCAGTGGAGCTCGTCG 61.016 55.000 7.83 0.00 34.99 5.12
721 725 2.842394 ATTGCAGTGGAGCTCGTCGG 62.842 60.000 7.83 5.18 34.99 4.79
722 726 3.749064 GCAGTGGAGCTCGTCGGA 61.749 66.667 7.83 0.00 0.00 4.55
723 727 2.179517 CAGTGGAGCTCGTCGGAC 59.820 66.667 7.83 0.00 0.00 4.79
724 728 3.432588 AGTGGAGCTCGTCGGACG 61.433 66.667 23.73 23.73 44.19 4.79
725 729 4.477975 GTGGAGCTCGTCGGACGG 62.478 72.222 28.07 19.67 42.81 4.79
738 742 4.430765 GACGGCGTCGGTGATGGT 62.431 66.667 25.42 0.00 41.39 3.55
739 743 3.927163 GACGGCGTCGGTGATGGTT 62.927 63.158 25.42 0.00 41.39 3.67
740 744 3.487202 CGGCGTCGGTGATGGTTG 61.487 66.667 0.00 0.00 0.00 3.77
741 745 3.124921 GGCGTCGGTGATGGTTGG 61.125 66.667 0.00 0.00 0.00 3.77
742 746 2.047655 GCGTCGGTGATGGTTGGA 60.048 61.111 0.00 0.00 0.00 3.53
743 747 2.100631 GCGTCGGTGATGGTTGGAG 61.101 63.158 0.00 0.00 0.00 3.86
744 748 2.100631 CGTCGGTGATGGTTGGAGC 61.101 63.158 0.00 0.00 0.00 4.70
745 749 1.003839 GTCGGTGATGGTTGGAGCA 60.004 57.895 0.00 0.00 0.00 4.26
746 750 1.003839 TCGGTGATGGTTGGAGCAC 60.004 57.895 0.00 0.00 0.00 4.40
747 751 2.040544 CGGTGATGGTTGGAGCACC 61.041 63.158 0.00 0.00 46.93 5.01
748 752 2.040544 GGTGATGGTTGGAGCACCG 61.041 63.158 0.00 0.00 42.27 4.94
749 753 2.359850 TGATGGTTGGAGCACCGC 60.360 61.111 0.00 0.00 40.09 5.68
750 754 2.359850 GATGGTTGGAGCACCGCA 60.360 61.111 0.00 0.00 40.09 5.69
751 755 2.672996 ATGGTTGGAGCACCGCAC 60.673 61.111 0.00 0.00 40.09 5.34
752 756 3.490031 ATGGTTGGAGCACCGCACA 62.490 57.895 0.00 0.00 40.09 4.57
753 757 3.357079 GGTTGGAGCACCGCACAG 61.357 66.667 0.00 0.00 39.42 3.66
754 758 2.591715 GTTGGAGCACCGCACAGT 60.592 61.111 0.00 0.00 39.42 3.55
755 759 2.591429 TTGGAGCACCGCACAGTG 60.591 61.111 0.00 0.00 40.88 3.66
761 765 3.585020 CACCGCACAGTGCTGCAA 61.585 61.111 23.15 0.00 42.25 4.08
762 766 2.595463 ACCGCACAGTGCTGCAAT 60.595 55.556 23.15 0.00 42.25 3.56
763 767 2.126618 CCGCACAGTGCTGCAATG 60.127 61.111 26.33 26.33 42.25 2.82
764 768 2.803670 CGCACAGTGCTGCAATGC 60.804 61.111 27.63 22.96 42.25 3.56
765 769 2.431942 GCACAGTGCTGCAATGCC 60.432 61.111 27.63 16.20 40.96 4.40
766 770 3.044280 CACAGTGCTGCAATGCCA 58.956 55.556 27.63 0.00 32.35 4.92
767 771 1.372499 CACAGTGCTGCAATGCCAC 60.372 57.895 27.63 4.53 32.35 5.01
768 772 1.829096 ACAGTGCTGCAATGCCACA 60.829 52.632 27.63 5.42 32.35 4.17
769 773 1.183030 ACAGTGCTGCAATGCCACAT 61.183 50.000 27.63 7.14 32.35 3.21
770 774 0.457853 CAGTGCTGCAATGCCACATC 60.458 55.000 17.50 0.00 0.00 3.06
771 775 1.515519 GTGCTGCAATGCCACATCG 60.516 57.895 2.77 0.00 0.00 3.84
772 776 1.972752 TGCTGCAATGCCACATCGT 60.973 52.632 1.53 0.00 0.00 3.73
773 777 1.213537 GCTGCAATGCCACATCGTT 59.786 52.632 1.53 0.00 0.00 3.85
774 778 1.074319 GCTGCAATGCCACATCGTTG 61.074 55.000 1.53 0.00 36.36 4.10
775 779 0.522626 CTGCAATGCCACATCGTTGA 59.477 50.000 1.53 0.00 35.53 3.18
776 780 0.957362 TGCAATGCCACATCGTTGAA 59.043 45.000 1.53 0.00 35.53 2.69
777 781 1.068402 TGCAATGCCACATCGTTGAAG 60.068 47.619 1.53 0.00 35.53 3.02
778 782 1.068333 GCAATGCCACATCGTTGAAGT 60.068 47.619 0.00 0.00 35.53 3.01
779 783 2.607771 GCAATGCCACATCGTTGAAGTT 60.608 45.455 0.00 0.00 35.53 2.66
780 784 2.981805 CAATGCCACATCGTTGAAGTTG 59.018 45.455 0.00 0.00 35.53 3.16
781 785 1.674359 TGCCACATCGTTGAAGTTGT 58.326 45.000 0.00 0.00 0.00 3.32
782 786 1.601903 TGCCACATCGTTGAAGTTGTC 59.398 47.619 0.00 0.00 0.00 3.18
783 787 1.398451 GCCACATCGTTGAAGTTGTCG 60.398 52.381 0.00 0.00 0.00 4.35
784 788 1.864711 CCACATCGTTGAAGTTGTCGT 59.135 47.619 0.00 0.00 0.00 4.34
785 789 2.348498 CCACATCGTTGAAGTTGTCGTG 60.348 50.000 0.00 0.00 0.00 4.35
786 790 2.538037 CACATCGTTGAAGTTGTCGTGA 59.462 45.455 0.00 0.00 0.00 4.35
787 791 3.184379 CACATCGTTGAAGTTGTCGTGAT 59.816 43.478 0.00 0.00 0.00 3.06
788 792 3.184379 ACATCGTTGAAGTTGTCGTGATG 59.816 43.478 0.00 0.00 37.57 3.07
789 793 2.816689 TCGTTGAAGTTGTCGTGATGT 58.183 42.857 0.00 0.00 0.00 3.06
790 794 3.967401 TCGTTGAAGTTGTCGTGATGTA 58.033 40.909 0.00 0.00 0.00 2.29
791 795 3.732219 TCGTTGAAGTTGTCGTGATGTAC 59.268 43.478 0.00 0.00 0.00 2.90
792 796 3.734231 CGTTGAAGTTGTCGTGATGTACT 59.266 43.478 0.00 0.00 0.00 2.73
793 797 4.375005 CGTTGAAGTTGTCGTGATGTACTG 60.375 45.833 0.00 0.00 0.00 2.74
794 798 3.057019 TGAAGTTGTCGTGATGTACTGC 58.943 45.455 0.00 0.00 0.00 4.40
795 799 3.243737 TGAAGTTGTCGTGATGTACTGCT 60.244 43.478 0.00 0.00 0.00 4.24
796 800 2.677199 AGTTGTCGTGATGTACTGCTG 58.323 47.619 0.00 0.00 0.00 4.41
797 801 1.126846 GTTGTCGTGATGTACTGCTGC 59.873 52.381 0.00 0.00 0.00 5.25
798 802 0.389817 TGTCGTGATGTACTGCTGCC 60.390 55.000 0.00 0.00 0.00 4.85
799 803 1.153842 TCGTGATGTACTGCTGCCG 60.154 57.895 0.00 0.00 0.00 5.69
800 804 1.446099 CGTGATGTACTGCTGCCGT 60.446 57.895 1.58 1.58 0.00 5.68
801 805 1.686566 CGTGATGTACTGCTGCCGTG 61.687 60.000 6.98 0.00 0.00 4.94
802 806 1.079197 TGATGTACTGCTGCCGTGG 60.079 57.895 6.98 0.00 0.00 4.94
803 807 2.436646 ATGTACTGCTGCCGTGGC 60.437 61.111 6.98 3.30 42.35 5.01
806 810 4.308458 TACTGCTGCCGTGGCGTT 62.308 61.111 6.98 0.00 45.51 4.84
810 814 4.980903 GCTGCCGTGGCGTTGTTG 62.981 66.667 6.37 0.00 45.51 3.33
811 815 3.582120 CTGCCGTGGCGTTGTTGT 61.582 61.111 6.37 0.00 45.51 3.32
812 816 3.805385 CTGCCGTGGCGTTGTTGTG 62.805 63.158 6.37 0.00 45.51 3.33
813 817 4.622456 GCCGTGGCGTTGTTGTGG 62.622 66.667 0.00 0.00 0.00 4.17
814 818 3.206246 CCGTGGCGTTGTTGTGGT 61.206 61.111 0.00 0.00 0.00 4.16
815 819 2.326550 CGTGGCGTTGTTGTGGTC 59.673 61.111 0.00 0.00 0.00 4.02
816 820 2.465299 CGTGGCGTTGTTGTGGTCA 61.465 57.895 0.00 0.00 0.00 4.02
817 821 1.803943 GTGGCGTTGTTGTGGTCAA 59.196 52.632 0.00 0.00 0.00 3.18
818 822 0.171455 GTGGCGTTGTTGTGGTCAAA 59.829 50.000 0.00 0.00 35.20 2.69
819 823 0.171455 TGGCGTTGTTGTGGTCAAAC 59.829 50.000 0.00 0.00 35.20 2.93
820 824 0.863957 GGCGTTGTTGTGGTCAAACG 60.864 55.000 2.64 2.64 39.37 3.60
821 825 0.863957 GCGTTGTTGTGGTCAAACGG 60.864 55.000 8.62 0.00 37.88 4.44
822 826 0.863957 CGTTGTTGTGGTCAAACGGC 60.864 55.000 0.00 0.00 35.48 5.68
823 827 0.526739 GTTGTTGTGGTCAAACGGCC 60.527 55.000 0.00 0.00 35.20 6.13
824 828 0.681564 TTGTTGTGGTCAAACGGCCT 60.682 50.000 0.00 0.00 35.20 5.19
825 829 0.180642 TGTTGTGGTCAAACGGCCTA 59.819 50.000 0.00 0.00 35.20 3.93
826 830 0.872388 GTTGTGGTCAAACGGCCTAG 59.128 55.000 0.00 0.00 35.20 3.02
827 831 0.887387 TTGTGGTCAAACGGCCTAGC 60.887 55.000 0.00 0.00 0.00 3.42
828 832 1.302192 GTGGTCAAACGGCCTAGCA 60.302 57.895 0.00 0.00 0.00 3.49
829 833 1.302192 TGGTCAAACGGCCTAGCAC 60.302 57.895 0.00 0.00 0.00 4.40
830 834 2.388232 GGTCAAACGGCCTAGCACG 61.388 63.158 0.00 3.18 0.00 5.34
831 835 2.740826 TCAAACGGCCTAGCACGC 60.741 61.111 0.00 0.00 0.00 5.34
832 836 2.742372 CAAACGGCCTAGCACGCT 60.742 61.111 0.00 0.00 0.00 5.07
833 837 2.742372 AAACGGCCTAGCACGCTG 60.742 61.111 0.00 1.04 38.63 5.18
834 838 3.234630 AAACGGCCTAGCACGCTGA 62.235 57.895 0.00 0.00 36.42 4.26
835 839 2.521958 AAACGGCCTAGCACGCTGAT 62.522 55.000 0.00 0.00 36.42 2.90
836 840 2.659897 CGGCCTAGCACGCTGATC 60.660 66.667 0.00 0.00 34.33 2.92
837 841 2.659897 GGCCTAGCACGCTGATCG 60.660 66.667 0.72 0.00 45.38 3.69
838 842 2.659897 GCCTAGCACGCTGATCGG 60.660 66.667 0.72 0.00 43.86 4.18
839 843 3.120105 CCTAGCACGCTGATCGGA 58.880 61.111 5.48 0.00 43.86 4.55
840 844 1.299468 CCTAGCACGCTGATCGGAC 60.299 63.158 5.48 0.00 43.86 4.79
841 845 1.655654 CTAGCACGCTGATCGGACG 60.656 63.158 5.48 11.01 43.86 4.79
842 846 2.990674 CTAGCACGCTGATCGGACGG 62.991 65.000 18.29 10.77 43.86 4.79
844 848 4.498520 CACGCTGATCGGACGGCT 62.499 66.667 18.29 1.11 43.86 5.52
845 849 4.498520 ACGCTGATCGGACGGCTG 62.499 66.667 18.29 0.00 43.86 4.85
846 850 4.193334 CGCTGATCGGACGGCTGA 62.193 66.667 0.00 0.00 39.69 4.26
847 851 2.184322 GCTGATCGGACGGCTGAA 59.816 61.111 2.50 0.00 38.89 3.02
848 852 2.167861 GCTGATCGGACGGCTGAAC 61.168 63.158 2.50 0.67 38.89 3.18
849 853 1.215382 CTGATCGGACGGCTGAACA 59.785 57.895 9.97 9.97 32.06 3.18
850 854 0.803768 CTGATCGGACGGCTGAACAG 60.804 60.000 21.42 21.42 41.82 3.16
851 855 1.519455 GATCGGACGGCTGAACAGG 60.519 63.158 2.50 0.00 32.06 4.00
858 862 3.512516 GGCTGAACAGGCGGATGC 61.513 66.667 12.20 0.00 44.15 3.91
859 863 2.437359 GCTGAACAGGCGGATGCT 60.437 61.111 3.99 0.00 42.25 3.79
860 864 2.758089 GCTGAACAGGCGGATGCTG 61.758 63.158 3.99 0.00 42.25 4.41
861 865 1.078918 CTGAACAGGCGGATGCTGA 60.079 57.895 0.00 0.00 42.25 4.26
862 866 0.463295 CTGAACAGGCGGATGCTGAT 60.463 55.000 0.00 0.00 42.25 2.90
863 867 0.035152 TGAACAGGCGGATGCTGATT 60.035 50.000 0.00 0.00 42.25 2.57
864 868 1.098050 GAACAGGCGGATGCTGATTT 58.902 50.000 0.00 0.00 42.25 2.17
865 869 0.813184 AACAGGCGGATGCTGATTTG 59.187 50.000 0.00 0.00 42.25 2.32
866 870 0.322816 ACAGGCGGATGCTGATTTGT 60.323 50.000 0.00 0.00 42.25 2.83
867 871 1.065491 ACAGGCGGATGCTGATTTGTA 60.065 47.619 0.00 0.00 42.25 2.41
868 872 1.600957 CAGGCGGATGCTGATTTGTAG 59.399 52.381 0.00 0.00 42.25 2.74
869 873 1.210478 AGGCGGATGCTGATTTGTAGT 59.790 47.619 0.00 0.00 42.25 2.73
870 874 2.434336 AGGCGGATGCTGATTTGTAGTA 59.566 45.455 0.00 0.00 42.25 1.82
871 875 3.118408 AGGCGGATGCTGATTTGTAGTAA 60.118 43.478 0.00 0.00 42.25 2.24
872 876 3.002348 GGCGGATGCTGATTTGTAGTAAC 59.998 47.826 0.00 0.00 42.25 2.50
873 877 3.302480 GCGGATGCTGATTTGTAGTAACG 60.302 47.826 0.00 0.00 38.39 3.18
874 878 3.302480 CGGATGCTGATTTGTAGTAACGC 60.302 47.826 0.00 0.00 0.00 4.84
875 879 3.002348 GGATGCTGATTTGTAGTAACGCC 59.998 47.826 0.00 0.00 0.00 5.68
876 880 2.352388 TGCTGATTTGTAGTAACGCCC 58.648 47.619 0.00 0.00 0.00 6.13
877 881 2.027561 TGCTGATTTGTAGTAACGCCCT 60.028 45.455 0.00 0.00 0.00 5.19
878 882 3.196039 TGCTGATTTGTAGTAACGCCCTA 59.804 43.478 0.00 0.00 0.00 3.53
879 883 4.186159 GCTGATTTGTAGTAACGCCCTAA 58.814 43.478 0.00 0.00 0.00 2.69
880 884 4.632688 GCTGATTTGTAGTAACGCCCTAAA 59.367 41.667 0.00 0.00 0.00 1.85
881 885 5.122711 GCTGATTTGTAGTAACGCCCTAAAA 59.877 40.000 0.00 0.00 0.00 1.52
882 886 6.348704 GCTGATTTGTAGTAACGCCCTAAAAA 60.349 38.462 0.00 0.00 0.00 1.94
923 927 4.022503 GCATGAGAATAGGAAGATTTGGCC 60.023 45.833 0.00 0.00 0.00 5.36
926 930 4.141390 TGAGAATAGGAAGATTTGGCCTCC 60.141 45.833 3.32 0.22 33.28 4.30
938 942 3.075005 GCCTCCAGCAGTACCCGA 61.075 66.667 0.00 0.00 42.97 5.14
939 943 2.435693 GCCTCCAGCAGTACCCGAT 61.436 63.158 0.00 0.00 42.97 4.18
979 983 1.908066 CTACAAGCCGAAACCGCCAC 61.908 60.000 0.00 0.00 0.00 5.01
986 990 2.604174 CGAAACCGCCACACCTCAC 61.604 63.158 0.00 0.00 0.00 3.51
1004 1008 3.605634 TCACCCATATCAAACTCCAACG 58.394 45.455 0.00 0.00 0.00 4.10
1022 1026 2.892373 CGATCTCCTCGTAGCATCTC 57.108 55.000 0.00 0.00 42.56 2.75
1023 1027 2.147150 CGATCTCCTCGTAGCATCTCA 58.853 52.381 0.00 0.00 42.56 3.27
1025 1029 3.003793 CGATCTCCTCGTAGCATCTCAAA 59.996 47.826 0.00 0.00 42.56 2.69
1026 1030 3.784701 TCTCCTCGTAGCATCTCAAAC 57.215 47.619 0.00 0.00 0.00 2.93
1133 4083 1.732732 GCTTCTCTCTTCGCTTACGCA 60.733 52.381 0.00 0.00 39.84 5.24
1193 4143 0.454600 GCGACCGTCACTTAGATCCA 59.545 55.000 0.00 0.00 0.00 3.41
1366 4330 5.424757 TCGGTATTCTTTACACATCTTGGG 58.575 41.667 0.00 0.00 0.00 4.12
1498 4808 2.270850 GGTGGTGCCGCTTCCATA 59.729 61.111 10.18 0.00 36.09 2.74
1572 4882 2.883730 GCGCGGCATGTCTACGAA 60.884 61.111 8.83 0.00 0.00 3.85
1682 4992 2.028930 CCAGGACTCACAGAACTGGTAC 60.029 54.545 6.76 0.00 42.83 3.34
1740 5124 1.531423 TCTGTACTGACGGGTGTCTC 58.469 55.000 0.00 0.00 45.70 3.36
1745 5129 0.031721 ACTGACGGGTGTCTCGAAAC 59.968 55.000 0.00 0.00 45.70 2.78
1749 5133 2.257034 GACGGGTGTCTCGAAACATAC 58.743 52.381 0.00 0.00 42.08 2.39
1785 5169 7.867305 TTGGATAATCCGTAATGTTAAGCAA 57.133 32.000 0.00 0.00 40.17 3.91
1786 5170 7.867305 TGGATAATCCGTAATGTTAAGCAAA 57.133 32.000 0.00 0.00 40.17 3.68
1805 5189 4.971830 GCAAACCTAAAGAAACGGTTGTAC 59.028 41.667 0.00 0.00 40.67 2.90
1827 5211 4.503007 ACACGCTAGCAGTAAATACGATTG 59.497 41.667 16.45 0.00 0.00 2.67
1868 5282 5.732633 CCATTTGGATGCAAAGGAAATGTA 58.267 37.500 23.46 0.00 37.39 2.29
1869 5283 6.350906 CCATTTGGATGCAAAGGAAATGTAT 58.649 36.000 23.46 0.00 37.39 2.29
1888 5302 6.173427 TGTATGCTTGCTAGATGGTAATCA 57.827 37.500 0.00 0.00 35.03 2.57
1922 5339 1.069973 CGAGCTGAACACAAAATGCGA 60.070 47.619 0.00 0.00 0.00 5.10
1930 5347 6.949877 GCTGAACACAAAATGCGAAATAAATC 59.050 34.615 0.00 0.00 0.00 2.17
1934 5351 6.158598 ACACAAAATGCGAAATAAATCTGCT 58.841 32.000 0.00 0.00 0.00 4.24
1942 5359 5.198274 GCGAAATAAATCTGCTAAGAACCG 58.802 41.667 0.00 0.00 35.59 4.44
1951 5368 6.663944 ATCTGCTAAGAACCGTAACAAATC 57.336 37.500 0.00 0.00 35.59 2.17
1953 5370 5.637810 TCTGCTAAGAACCGTAACAAATCTG 59.362 40.000 0.00 0.00 0.00 2.90
1954 5371 4.153475 TGCTAAGAACCGTAACAAATCTGC 59.847 41.667 0.00 0.00 0.00 4.26
2009 5467 3.450507 TGGCGACAACGAGGAAGA 58.549 55.556 0.00 0.00 42.66 2.87
2010 5468 1.972198 TGGCGACAACGAGGAAGAT 59.028 52.632 0.00 0.00 42.66 2.40
2014 5472 1.823828 CGACAACGAGGAAGATACCG 58.176 55.000 0.00 0.00 42.66 4.02
2036 5494 2.742372 CAAACTCCAGGTCGCCCG 60.742 66.667 0.00 0.00 35.12 6.13
2068 5526 3.961414 TTGTCGGCCTTCCCCACC 61.961 66.667 0.00 0.00 0.00 4.61
2073 5580 2.758434 GGCCTTCCCCACCGTTTA 59.242 61.111 0.00 0.00 0.00 2.01
2142 5655 1.954382 CATTGAGGATGGTGCTGATGG 59.046 52.381 0.00 0.00 31.83 3.51
2147 5660 1.152610 GATGGTGCTGATGGGGCAT 60.153 57.895 0.00 0.00 41.86 4.40
2149 5662 0.757935 ATGGTGCTGATGGGGCATTC 60.758 55.000 0.00 0.00 41.86 2.67
2172 5686 1.880027 GTCATGCTTCGTTTTGGGTCT 59.120 47.619 0.00 0.00 0.00 3.85
2200 5714 3.879892 CTCCAGATCTAGTCGTGTGATGA 59.120 47.826 0.00 0.00 0.00 2.92
2205 5719 3.866883 TCTAGTCGTGTGATGATGCAA 57.133 42.857 0.00 0.00 0.00 4.08
2220 5734 0.703488 TGCAATGGATTCTGGGGTCA 59.297 50.000 0.00 0.00 0.00 4.02
2264 5778 0.673644 ATGCTTCTGGTCGTTTCCCG 60.674 55.000 0.00 0.00 38.13 5.14
2273 5787 3.411351 CGTTTCCCGGTGTGCTCG 61.411 66.667 0.00 0.00 0.00 5.03
2281 5795 2.665185 GGTGTGCTCGCGTCCTTT 60.665 61.111 5.77 0.00 0.00 3.11
2314 5828 2.027745 CACCATATCCCTTCCCATCTCG 60.028 54.545 0.00 0.00 0.00 4.04
2324 5838 1.045350 TCCCATCTCGGCCTTCTCTG 61.045 60.000 0.00 0.00 0.00 3.35
2327 5841 2.439104 ATCTCGGCCTTCTCTGCCC 61.439 63.158 0.00 0.00 46.48 5.36
2344 5858 1.295423 CCGATCCAACGTGGTTCCT 59.705 57.895 0.00 0.00 39.03 3.36
2351 5865 2.105821 TCCAACGTGGTTCCTTCAGATT 59.894 45.455 0.00 0.00 39.03 2.40
2357 5871 3.684788 CGTGGTTCCTTCAGATTTAGTGG 59.315 47.826 0.00 0.00 0.00 4.00
2361 5875 4.262617 GTTCCTTCAGATTTAGTGGTCCC 58.737 47.826 0.00 0.00 0.00 4.46
2372 5886 1.906824 GTGGTCCCGTCTCCTGTCA 60.907 63.158 0.00 0.00 0.00 3.58
2391 5905 4.591924 TGTCAGCTCATCTATGTCCATCAT 59.408 41.667 0.00 0.00 40.25 2.45
2416 5930 0.738389 CTTTGTCGTTGGTTGTGGCT 59.262 50.000 0.00 0.00 0.00 4.75
2429 5944 2.594303 TGGCTGGCTTGTTGGTCG 60.594 61.111 2.00 0.00 0.00 4.79
2457 5973 5.858381 AGTCTAGATGTCTTTTGCTTGTGA 58.142 37.500 0.00 0.00 0.00 3.58
2473 5989 0.936297 GTGACGGTGTGGTCGTGTAC 60.936 60.000 0.00 0.00 41.22 2.90
2479 5995 3.305516 GTGGTCGTGTACGGGGGT 61.306 66.667 4.44 0.00 40.29 4.95
2482 5998 2.278330 GGTCGTGTACGGGGGTTCT 61.278 63.158 4.44 0.00 40.29 3.01
2490 6006 1.262640 TACGGGGGTTCTGCCTCTTC 61.263 60.000 0.00 0.00 38.03 2.87
2494 6010 0.391793 GGGGTTCTGCCTCTTCTTCG 60.392 60.000 0.00 0.00 33.93 3.79
2500 6016 2.184579 GCCTCTTCTTCGTCCCCG 59.815 66.667 0.00 0.00 0.00 5.73
2518 6034 0.609131 CGATGGTTCTGCCCCTTGTT 60.609 55.000 0.00 0.00 36.04 2.83
2520 6036 1.187567 ATGGTTCTGCCCCTTGTTGC 61.188 55.000 0.00 0.00 36.04 4.17
2554 6070 1.136611 CGTCGTCTTTGCTACTTGTGC 60.137 52.381 0.00 0.00 0.00 4.57
2581 6098 3.189606 TCCTACTTCCCATGGTTCATGT 58.810 45.455 11.73 5.32 39.94 3.21
2589 6106 1.892474 CCATGGTTCATGTTTTCCCGT 59.108 47.619 2.57 0.00 39.94 5.28
2596 6113 1.352687 TCATGTTTTCCCGTCCCATGA 59.647 47.619 0.00 0.00 39.51 3.07
2597 6114 2.166829 CATGTTTTCCCGTCCCATGAA 58.833 47.619 0.00 0.00 35.96 2.57
2609 6126 3.049344 GTCCCATGAACCTCCTCCTATT 58.951 50.000 0.00 0.00 0.00 1.73
2611 6128 2.780010 CCCATGAACCTCCTCCTATTGT 59.220 50.000 0.00 0.00 0.00 2.71
2612 6129 3.434167 CCCATGAACCTCCTCCTATTGTG 60.434 52.174 0.00 0.00 0.00 3.33
2614 6131 3.981071 TGAACCTCCTCCTATTGTGTG 57.019 47.619 0.00 0.00 0.00 3.82
2623 6140 0.965363 CCTATTGTGTGGGTGGTGGC 60.965 60.000 0.00 0.00 0.00 5.01
2629 6146 1.850289 TGTGGGTGGTGGCTGGTAT 60.850 57.895 0.00 0.00 0.00 2.73
2634 6151 3.006133 TGGTGGCTGGTATGGCGA 61.006 61.111 0.00 0.00 35.06 5.54
2635 6152 2.513897 GGTGGCTGGTATGGCGAC 60.514 66.667 0.00 0.00 37.62 5.19
2636 6153 2.890474 GTGGCTGGTATGGCGACG 60.890 66.667 0.00 0.00 35.06 5.12
2639 6156 1.142314 GGCTGGTATGGCGACGTTA 59.858 57.895 0.00 0.00 0.00 3.18
2648 6165 2.388232 GGCGACGTTAGGCTTGTGG 61.388 63.158 10.48 0.00 0.00 4.17
2653 6170 1.798813 GACGTTAGGCTTGTGGTCTTG 59.201 52.381 0.00 0.00 0.00 3.02
2659 6176 1.518903 GGCTTGTGGTCTTGTGGCTC 61.519 60.000 0.00 0.00 0.00 4.70
2660 6177 0.819259 GCTTGTGGTCTTGTGGCTCA 60.819 55.000 0.00 0.00 0.00 4.26
2687 6204 1.636340 GTGCCTACGCGTATGCAAG 59.364 57.895 38.48 22.04 42.97 4.01
2695 6212 0.179225 CGCGTATGCAAGTGGTGTTC 60.179 55.000 7.86 0.00 42.97 3.18
2696 6213 0.871722 GCGTATGCAAGTGGTGTTCA 59.128 50.000 0.89 0.00 42.15 3.18
2697 6214 1.399727 GCGTATGCAAGTGGTGTTCAC 60.400 52.381 0.89 0.00 43.11 3.18
2712 6229 4.929808 GGTGTTCACTCAATACTAGTGGTG 59.070 45.833 5.39 3.40 43.69 4.17
2715 6232 5.305902 TGTTCACTCAATACTAGTGGTGGAA 59.694 40.000 5.39 0.54 43.69 3.53
2718 6235 5.043903 CACTCAATACTAGTGGTGGAATCG 58.956 45.833 5.39 0.00 40.56 3.34
2720 6237 5.187186 ACTCAATACTAGTGGTGGAATCGTT 59.813 40.000 5.39 0.00 0.00 3.85
2733 6250 4.278678 GGAATCGTTCCTATGTTGCTTG 57.721 45.455 8.87 0.00 46.57 4.01
2734 6251 3.689649 GGAATCGTTCCTATGTTGCTTGT 59.310 43.478 8.87 0.00 46.57 3.16
2735 6252 4.437390 GGAATCGTTCCTATGTTGCTTGTG 60.437 45.833 8.87 0.00 46.57 3.33
2736 6253 3.120321 TCGTTCCTATGTTGCTTGTGT 57.880 42.857 0.00 0.00 0.00 3.72
2737 6254 3.472652 TCGTTCCTATGTTGCTTGTGTT 58.527 40.909 0.00 0.00 0.00 3.32
2738 6255 3.880490 TCGTTCCTATGTTGCTTGTGTTT 59.120 39.130 0.00 0.00 0.00 2.83
2739 6256 4.024387 TCGTTCCTATGTTGCTTGTGTTTC 60.024 41.667 0.00 0.00 0.00 2.78
2740 6257 4.219033 GTTCCTATGTTGCTTGTGTTTCG 58.781 43.478 0.00 0.00 0.00 3.46
2741 6258 3.472652 TCCTATGTTGCTTGTGTTTCGT 58.527 40.909 0.00 0.00 0.00 3.85
2742 6259 3.496884 TCCTATGTTGCTTGTGTTTCGTC 59.503 43.478 0.00 0.00 0.00 4.20
2743 6260 2.383298 ATGTTGCTTGTGTTTCGTCG 57.617 45.000 0.00 0.00 0.00 5.12
2744 6261 1.080298 TGTTGCTTGTGTTTCGTCGT 58.920 45.000 0.00 0.00 0.00 4.34
2745 6262 2.269172 TGTTGCTTGTGTTTCGTCGTA 58.731 42.857 0.00 0.00 0.00 3.43
2746 6263 2.283086 TGTTGCTTGTGTTTCGTCGTAG 59.717 45.455 0.00 0.00 0.00 3.51
2747 6264 2.212869 TGCTTGTGTTTCGTCGTAGT 57.787 45.000 0.00 0.00 0.00 2.73
2748 6265 2.121786 TGCTTGTGTTTCGTCGTAGTC 58.878 47.619 0.00 0.00 0.00 2.59
2749 6266 2.121786 GCTTGTGTTTCGTCGTAGTCA 58.878 47.619 0.00 0.00 0.00 3.41
2750 6267 2.153247 GCTTGTGTTTCGTCGTAGTCAG 59.847 50.000 0.00 0.00 0.00 3.51
2751 6268 2.410785 TGTGTTTCGTCGTAGTCAGG 57.589 50.000 0.00 0.00 0.00 3.86
2752 6269 1.677576 TGTGTTTCGTCGTAGTCAGGT 59.322 47.619 0.00 0.00 0.00 4.00
2753 6270 2.099592 TGTGTTTCGTCGTAGTCAGGTT 59.900 45.455 0.00 0.00 0.00 3.50
2754 6271 3.118542 GTGTTTCGTCGTAGTCAGGTTT 58.881 45.455 0.00 0.00 0.00 3.27
2755 6272 3.060740 GTGTTTCGTCGTAGTCAGGTTTG 60.061 47.826 0.00 0.00 0.00 2.93
2756 6273 2.427232 TTCGTCGTAGTCAGGTTTGG 57.573 50.000 0.00 0.00 0.00 3.28
2757 6274 0.599558 TCGTCGTAGTCAGGTTTGGG 59.400 55.000 0.00 0.00 0.00 4.12
2758 6275 0.316204 CGTCGTAGTCAGGTTTGGGT 59.684 55.000 0.00 0.00 0.00 4.51
2759 6276 1.668047 CGTCGTAGTCAGGTTTGGGTC 60.668 57.143 0.00 0.00 0.00 4.46
2760 6277 0.599558 TCGTAGTCAGGTTTGGGTCG 59.400 55.000 0.00 0.00 0.00 4.79
2761 6278 0.316204 CGTAGTCAGGTTTGGGTCGT 59.684 55.000 0.00 0.00 0.00 4.34
2762 6279 1.792006 GTAGTCAGGTTTGGGTCGTG 58.208 55.000 0.00 0.00 0.00 4.35
2763 6280 1.069668 GTAGTCAGGTTTGGGTCGTGT 59.930 52.381 0.00 0.00 0.00 4.49
2764 6281 0.179056 AGTCAGGTTTGGGTCGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
2765 6282 1.525077 TCAGGTTTGGGTCGTGTGC 60.525 57.895 0.00 0.00 0.00 4.57
2766 6283 1.525995 CAGGTTTGGGTCGTGTGCT 60.526 57.895 0.00 0.00 0.00 4.40
2767 6284 1.101049 CAGGTTTGGGTCGTGTGCTT 61.101 55.000 0.00 0.00 0.00 3.91
2768 6285 1.101049 AGGTTTGGGTCGTGTGCTTG 61.101 55.000 0.00 0.00 0.00 4.01
2769 6286 1.299089 GTTTGGGTCGTGTGCTTGC 60.299 57.895 0.00 0.00 0.00 4.01
2770 6287 2.485795 TTTGGGTCGTGTGCTTGCC 61.486 57.895 0.00 0.00 0.00 4.52
2774 6291 3.276846 GTCGTGTGCTTGCCGGTT 61.277 61.111 1.90 0.00 0.00 4.44
2775 6292 3.276091 TCGTGTGCTTGCCGGTTG 61.276 61.111 1.90 0.00 0.00 3.77
2776 6293 3.582120 CGTGTGCTTGCCGGTTGT 61.582 61.111 1.90 0.00 0.00 3.32
2777 6294 2.804856 GTGTGCTTGCCGGTTGTT 59.195 55.556 1.90 0.00 0.00 2.83
2778 6295 1.588667 GTGTGCTTGCCGGTTGTTG 60.589 57.895 1.90 0.00 0.00 3.33
2779 6296 2.049185 TGTGCTTGCCGGTTGTTGT 61.049 52.632 1.90 0.00 0.00 3.32
2780 6297 0.748367 TGTGCTTGCCGGTTGTTGTA 60.748 50.000 1.90 0.00 0.00 2.41
2781 6298 0.596082 GTGCTTGCCGGTTGTTGTAT 59.404 50.000 1.90 0.00 0.00 2.29
2782 6299 0.595588 TGCTTGCCGGTTGTTGTATG 59.404 50.000 1.90 0.00 0.00 2.39
2783 6300 0.596082 GCTTGCCGGTTGTTGTATGT 59.404 50.000 1.90 0.00 0.00 2.29
2784 6301 1.807742 GCTTGCCGGTTGTTGTATGTA 59.192 47.619 1.90 0.00 0.00 2.29
2785 6302 2.422127 GCTTGCCGGTTGTTGTATGTAT 59.578 45.455 1.90 0.00 0.00 2.29
2786 6303 3.119637 GCTTGCCGGTTGTTGTATGTATT 60.120 43.478 1.90 0.00 0.00 1.89
2787 6304 4.658071 CTTGCCGGTTGTTGTATGTATTC 58.342 43.478 1.90 0.00 0.00 1.75
2788 6305 3.945346 TGCCGGTTGTTGTATGTATTCT 58.055 40.909 1.90 0.00 0.00 2.40
2789 6306 4.328536 TGCCGGTTGTTGTATGTATTCTT 58.671 39.130 1.90 0.00 0.00 2.52
2790 6307 5.489249 TGCCGGTTGTTGTATGTATTCTTA 58.511 37.500 1.90 0.00 0.00 2.10
2791 6308 6.116806 TGCCGGTTGTTGTATGTATTCTTAT 58.883 36.000 1.90 0.00 0.00 1.73
2792 6309 7.273712 TGCCGGTTGTTGTATGTATTCTTATA 58.726 34.615 1.90 0.00 0.00 0.98
2793 6310 7.439955 TGCCGGTTGTTGTATGTATTCTTATAG 59.560 37.037 1.90 0.00 0.00 1.31
2794 6311 7.440255 GCCGGTTGTTGTATGTATTCTTATAGT 59.560 37.037 1.90 0.00 0.00 2.12
2795 6312 8.761497 CCGGTTGTTGTATGTATTCTTATAGTG 58.239 37.037 0.00 0.00 0.00 2.74
2796 6313 8.761497 CGGTTGTTGTATGTATTCTTATAGTGG 58.239 37.037 0.00 0.00 0.00 4.00
2797 6314 9.826574 GGTTGTTGTATGTATTCTTATAGTGGA 57.173 33.333 0.00 0.00 0.00 4.02
2807 6324 9.613428 TGTATTCTTATAGTGGATGTTTTCCTG 57.387 33.333 0.00 0.00 45.68 3.86
2808 6325 7.573968 ATTCTTATAGTGGATGTTTTCCTGC 57.426 36.000 0.00 0.00 45.68 4.85
2809 6326 6.313519 TCTTATAGTGGATGTTTTCCTGCT 57.686 37.500 0.00 0.00 45.68 4.24
2810 6327 6.721318 TCTTATAGTGGATGTTTTCCTGCTT 58.279 36.000 0.00 0.00 45.68 3.91
2811 6328 7.175104 TCTTATAGTGGATGTTTTCCTGCTTT 58.825 34.615 0.00 0.00 45.68 3.51
2812 6329 7.669722 TCTTATAGTGGATGTTTTCCTGCTTTT 59.330 33.333 0.00 0.00 45.68 2.27
2813 6330 6.670695 ATAGTGGATGTTTTCCTGCTTTTT 57.329 33.333 0.00 0.00 45.68 1.94
2828 6345 1.365633 TTTTTGCCATGTGTCCCGC 59.634 52.632 0.00 0.00 0.00 6.13
2829 6346 1.112315 TTTTTGCCATGTGTCCCGCT 61.112 50.000 0.00 0.00 0.00 5.52
2830 6347 1.523154 TTTTGCCATGTGTCCCGCTC 61.523 55.000 0.00 0.00 0.00 5.03
2831 6348 3.918253 TTGCCATGTGTCCCGCTCC 62.918 63.158 0.00 0.00 0.00 4.70
2832 6349 4.101448 GCCATGTGTCCCGCTCCT 62.101 66.667 0.00 0.00 0.00 3.69
2833 6350 2.124983 CCATGTGTCCCGCTCCTG 60.125 66.667 0.00 0.00 0.00 3.86
2834 6351 2.124983 CATGTGTCCCGCTCCTGG 60.125 66.667 0.00 0.00 0.00 4.45
2835 6352 2.607750 ATGTGTCCCGCTCCTGGT 60.608 61.111 0.00 0.00 0.00 4.00
2836 6353 2.660064 ATGTGTCCCGCTCCTGGTC 61.660 63.158 0.00 0.00 0.00 4.02
2837 6354 2.997897 GTGTCCCGCTCCTGGTCT 60.998 66.667 0.00 0.00 0.00 3.85
2838 6355 1.681327 GTGTCCCGCTCCTGGTCTA 60.681 63.158 0.00 0.00 0.00 2.59
2839 6356 1.379977 TGTCCCGCTCCTGGTCTAG 60.380 63.158 0.00 0.00 0.00 2.43
2840 6357 1.380112 GTCCCGCTCCTGGTCTAGT 60.380 63.158 0.00 0.00 0.00 2.57
2841 6358 1.076923 TCCCGCTCCTGGTCTAGTC 60.077 63.158 0.00 0.00 0.00 2.59
2842 6359 1.076632 CCCGCTCCTGGTCTAGTCT 60.077 63.158 0.00 0.00 0.00 3.24
2843 6360 0.183014 CCCGCTCCTGGTCTAGTCTA 59.817 60.000 0.00 0.00 0.00 2.59
2844 6361 1.600023 CCGCTCCTGGTCTAGTCTAG 58.400 60.000 0.00 0.00 0.00 2.43
2845 6362 1.600023 CGCTCCTGGTCTAGTCTAGG 58.400 60.000 12.26 12.26 37.41 3.02
2846 6363 1.134037 CGCTCCTGGTCTAGTCTAGGT 60.134 57.143 16.74 0.00 37.36 3.08
2847 6364 2.684334 CGCTCCTGGTCTAGTCTAGGTT 60.684 54.545 16.74 0.00 37.36 3.50
2848 6365 2.691011 GCTCCTGGTCTAGTCTAGGTTG 59.309 54.545 16.74 12.54 37.36 3.77
2849 6366 3.292460 CTCCTGGTCTAGTCTAGGTTGG 58.708 54.545 16.74 7.13 37.36 3.77
2850 6367 2.024273 TCCTGGTCTAGTCTAGGTTGGG 60.024 54.545 16.74 5.55 37.36 4.12
2851 6368 2.292323 CCTGGTCTAGTCTAGGTTGGGT 60.292 54.545 10.60 0.00 32.50 4.51
2852 6369 3.442076 CTGGTCTAGTCTAGGTTGGGTT 58.558 50.000 7.05 0.00 0.00 4.11
2853 6370 4.571362 CCTGGTCTAGTCTAGGTTGGGTTA 60.571 50.000 10.60 0.00 32.50 2.85
2854 6371 4.347607 TGGTCTAGTCTAGGTTGGGTTAC 58.652 47.826 7.05 0.00 0.00 2.50
2855 6372 3.379688 GGTCTAGTCTAGGTTGGGTTACG 59.620 52.174 7.05 0.00 0.00 3.18
2856 6373 4.013050 GTCTAGTCTAGGTTGGGTTACGT 58.987 47.826 7.05 0.00 0.00 3.57
2857 6374 4.012374 TCTAGTCTAGGTTGGGTTACGTG 58.988 47.826 7.05 0.00 0.00 4.49
2858 6375 1.897802 AGTCTAGGTTGGGTTACGTGG 59.102 52.381 0.00 0.00 0.00 4.94
2859 6376 1.620323 GTCTAGGTTGGGTTACGTGGT 59.380 52.381 0.00 0.00 0.00 4.16
2860 6377 1.895131 TCTAGGTTGGGTTACGTGGTC 59.105 52.381 0.00 0.00 0.00 4.02
2861 6378 1.897802 CTAGGTTGGGTTACGTGGTCT 59.102 52.381 0.00 0.00 0.00 3.85
2862 6379 1.134228 AGGTTGGGTTACGTGGTCTT 58.866 50.000 0.00 0.00 0.00 3.01
2863 6380 1.071228 AGGTTGGGTTACGTGGTCTTC 59.929 52.381 0.00 0.00 0.00 2.87
2864 6381 1.071228 GGTTGGGTTACGTGGTCTTCT 59.929 52.381 0.00 0.00 0.00 2.85
2865 6382 2.140717 GTTGGGTTACGTGGTCTTCTG 58.859 52.381 0.00 0.00 0.00 3.02
2866 6383 0.682852 TGGGTTACGTGGTCTTCTGG 59.317 55.000 0.00 0.00 0.00 3.86
2867 6384 0.683412 GGGTTACGTGGTCTTCTGGT 59.317 55.000 0.00 0.00 0.00 4.00
2868 6385 1.337541 GGGTTACGTGGTCTTCTGGTC 60.338 57.143 0.00 0.00 0.00 4.02
2869 6386 1.668047 GGTTACGTGGTCTTCTGGTCG 60.668 57.143 0.00 0.00 0.00 4.79
2870 6387 0.038892 TTACGTGGTCTTCTGGTCGC 60.039 55.000 0.00 0.00 0.00 5.19
2871 6388 2.191354 TACGTGGTCTTCTGGTCGCG 62.191 60.000 0.00 0.00 38.80 5.87
2872 6389 2.649034 GTGGTCTTCTGGTCGCGA 59.351 61.111 3.71 3.71 0.00 5.87
2873 6390 1.006571 GTGGTCTTCTGGTCGCGAA 60.007 57.895 12.06 0.00 0.00 4.70
2874 6391 0.389948 GTGGTCTTCTGGTCGCGAAT 60.390 55.000 12.06 0.00 0.00 3.34
2875 6392 0.108804 TGGTCTTCTGGTCGCGAATC 60.109 55.000 12.06 7.13 0.00 2.52
2876 6393 1.140407 GGTCTTCTGGTCGCGAATCG 61.140 60.000 12.06 0.00 40.15 3.34
2877 6394 0.456312 GTCTTCTGGTCGCGAATCGT 60.456 55.000 12.06 0.00 39.67 3.73
2878 6395 0.242825 TCTTCTGGTCGCGAATCGTT 59.757 50.000 12.06 0.00 39.67 3.85
2879 6396 0.366871 CTTCTGGTCGCGAATCGTTG 59.633 55.000 12.06 0.00 39.67 4.10
2880 6397 0.038983 TTCTGGTCGCGAATCGTTGA 60.039 50.000 12.06 0.54 39.67 3.18
2881 6398 0.172578 TCTGGTCGCGAATCGTTGAT 59.827 50.000 12.06 0.00 39.67 2.57
2882 6399 0.999406 CTGGTCGCGAATCGTTGATT 59.001 50.000 12.06 0.00 39.67 2.57
2883 6400 1.393539 CTGGTCGCGAATCGTTGATTT 59.606 47.619 12.06 0.00 39.67 2.17
2884 6401 1.801771 TGGTCGCGAATCGTTGATTTT 59.198 42.857 12.06 0.00 39.67 1.82
2885 6402 2.224549 TGGTCGCGAATCGTTGATTTTT 59.775 40.909 12.06 0.00 39.67 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.501741 CGCAAAAGGGGATCACGTG 59.498 57.895 9.94 9.94 0.00 4.49
4 5 2.710902 GGGCGCAAAAGGGGATCAC 61.711 63.158 10.83 0.00 0.00 3.06
6 7 3.147595 GGGGCGCAAAAGGGGATC 61.148 66.667 10.83 0.00 0.00 3.36
50 51 3.136123 GCACCATCATGCAGCGGT 61.136 61.111 0.00 0.00 45.39 5.68
79 80 2.431942 GAGGTACGTGGTGTGCGG 60.432 66.667 0.00 0.00 33.41 5.69
102 106 0.682209 GGAGGTTGCTGCATGATGGT 60.682 55.000 1.84 0.00 0.00 3.55
117 121 1.111116 TAGTATTCCGGCCGTGGAGG 61.111 60.000 26.12 8.39 39.72 4.30
124 128 1.067776 CCGATGTCTAGTATTCCGGCC 60.068 57.143 0.00 0.00 0.00 6.13
125 129 1.884579 TCCGATGTCTAGTATTCCGGC 59.115 52.381 0.00 0.00 35.86 6.13
245 249 2.816958 ATCGCAGCACGGCTTCTG 60.817 61.111 0.00 0.00 43.89 3.02
253 257 1.443194 CAAGGTTGCATCGCAGCAC 60.443 57.895 5.19 0.00 45.61 4.40
259 263 2.480555 GACGCCAAGGTTGCATCG 59.519 61.111 0.00 0.00 0.00 3.84
272 276 4.681978 AACTCCAGTGGCCGACGC 62.682 66.667 3.51 0.00 0.00 5.19
304 308 2.817423 CGCTCCATTGAAGCTCCGC 61.817 63.158 0.00 0.00 0.00 5.54
305 309 2.817423 GCGCTCCATTGAAGCTCCG 61.817 63.158 0.00 0.00 0.00 4.63
336 340 1.900585 GCTGATGAGCGTTGCGTTGA 61.901 55.000 0.00 0.00 34.87 3.18
369 373 1.795170 GCTTTGCAACTCCGCCTGAA 61.795 55.000 0.00 0.00 0.00 3.02
385 389 2.433318 GCTCCGTCGAAGCTGCTT 60.433 61.111 15.92 15.92 36.80 3.91
386 390 4.443266 GGCTCCGTCGAAGCTGCT 62.443 66.667 2.71 0.00 39.75 4.24
387 391 4.742201 TGGCTCCGTCGAAGCTGC 62.742 66.667 2.71 6.43 39.75 5.25
388 392 1.880340 GATGGCTCCGTCGAAGCTG 60.880 63.158 2.71 0.00 39.75 4.24
389 393 2.496817 GATGGCTCCGTCGAAGCT 59.503 61.111 2.71 0.00 39.75 3.74
403 407 4.933064 GAGCTCCGACGGGCGATG 62.933 72.222 15.25 0.00 44.57 3.84
409 413 4.504916 CTGGCAGAGCTCCGACGG 62.505 72.222 9.42 7.84 0.00 4.79
410 414 4.504916 CCTGGCAGAGCTCCGACG 62.505 72.222 17.94 0.00 0.00 5.12
411 415 4.154347 CCCTGGCAGAGCTCCGAC 62.154 72.222 17.94 1.93 0.00 4.79
414 418 4.486503 CAGCCCTGGCAGAGCTCC 62.487 72.222 21.52 0.00 44.88 4.70
418 422 0.394762 TAATTGCAGCCCTGGCAGAG 60.395 55.000 17.94 3.04 43.05 3.35
419 423 0.039472 TTAATTGCAGCCCTGGCAGA 59.961 50.000 17.94 0.00 43.05 4.26
420 424 0.458669 CTTAATTGCAGCCCTGGCAG 59.541 55.000 11.38 7.75 43.05 4.85
421 425 0.039472 TCTTAATTGCAGCCCTGGCA 59.961 50.000 11.38 0.00 44.88 4.92
422 426 1.339291 GATCTTAATTGCAGCCCTGGC 59.661 52.381 0.00 0.00 42.33 4.85
423 427 1.605710 CGATCTTAATTGCAGCCCTGG 59.394 52.381 0.00 0.00 0.00 4.45
424 428 2.289002 GTCGATCTTAATTGCAGCCCTG 59.711 50.000 0.00 0.00 0.00 4.45
425 429 2.565841 GTCGATCTTAATTGCAGCCCT 58.434 47.619 0.00 0.00 0.00 5.19
426 430 1.604278 GGTCGATCTTAATTGCAGCCC 59.396 52.381 0.00 0.00 0.00 5.19
427 431 1.261619 CGGTCGATCTTAATTGCAGCC 59.738 52.381 0.00 0.00 0.00 4.85
428 432 1.261619 CCGGTCGATCTTAATTGCAGC 59.738 52.381 0.00 0.00 0.00 5.25
429 433 2.797156 CTCCGGTCGATCTTAATTGCAG 59.203 50.000 0.00 0.00 0.00 4.41
430 434 2.429250 TCTCCGGTCGATCTTAATTGCA 59.571 45.455 0.00 0.00 0.00 4.08
431 435 3.093717 TCTCCGGTCGATCTTAATTGC 57.906 47.619 0.00 0.00 0.00 3.56
432 436 3.430218 GCATCTCCGGTCGATCTTAATTG 59.570 47.826 0.00 0.00 0.00 2.32
433 437 3.069586 TGCATCTCCGGTCGATCTTAATT 59.930 43.478 0.00 0.00 0.00 1.40
434 438 2.628178 TGCATCTCCGGTCGATCTTAAT 59.372 45.455 0.00 0.00 0.00 1.40
435 439 2.028876 TGCATCTCCGGTCGATCTTAA 58.971 47.619 0.00 0.00 0.00 1.85
436 440 1.687563 TGCATCTCCGGTCGATCTTA 58.312 50.000 0.00 0.00 0.00 2.10
437 441 0.824109 TTGCATCTCCGGTCGATCTT 59.176 50.000 0.00 0.00 0.00 2.40
438 442 0.824109 TTTGCATCTCCGGTCGATCT 59.176 50.000 0.00 0.00 0.00 2.75
439 443 1.212616 CTTTGCATCTCCGGTCGATC 58.787 55.000 0.00 0.00 0.00 3.69
440 444 0.811616 GCTTTGCATCTCCGGTCGAT 60.812 55.000 0.00 1.85 0.00 3.59
441 445 1.447838 GCTTTGCATCTCCGGTCGA 60.448 57.895 0.00 0.00 0.00 4.20
442 446 1.699656 CTGCTTTGCATCTCCGGTCG 61.700 60.000 0.00 0.00 38.13 4.79
443 447 1.986575 GCTGCTTTGCATCTCCGGTC 61.987 60.000 0.00 0.00 38.13 4.79
444 448 2.042831 GCTGCTTTGCATCTCCGGT 61.043 57.895 0.00 0.00 38.13 5.28
445 449 1.310933 AAGCTGCTTTGCATCTCCGG 61.311 55.000 9.53 0.00 38.13 5.14
446 450 0.098376 GAAGCTGCTTTGCATCTCCG 59.902 55.000 17.10 0.00 38.13 4.63
447 451 0.098376 CGAAGCTGCTTTGCATCTCC 59.902 55.000 17.10 0.00 38.13 3.71
448 452 0.801251 ACGAAGCTGCTTTGCATCTC 59.199 50.000 25.73 7.30 38.13 2.75
449 453 0.801251 GACGAAGCTGCTTTGCATCT 59.199 50.000 25.73 9.51 38.13 2.90
450 454 0.519999 CGACGAAGCTGCTTTGCATC 60.520 55.000 25.73 16.91 38.13 3.91
451 455 1.499056 CGACGAAGCTGCTTTGCAT 59.501 52.632 25.73 10.54 38.13 3.96
452 456 2.606961 CCGACGAAGCTGCTTTGCA 61.607 57.895 25.73 0.00 36.92 4.08
453 457 2.174349 CCGACGAAGCTGCTTTGC 59.826 61.111 25.73 17.94 0.00 3.68
454 458 1.784062 CTCCGACGAAGCTGCTTTG 59.216 57.895 24.53 24.53 0.00 2.77
455 459 2.029844 GCTCCGACGAAGCTGCTTT 61.030 57.895 17.10 0.58 36.80 3.51
456 460 2.433318 GCTCCGACGAAGCTGCTT 60.433 61.111 15.92 15.92 36.80 3.91
457 461 4.443266 GGCTCCGACGAAGCTGCT 62.443 66.667 5.92 0.00 39.75 4.24
460 464 4.117661 GACGGCTCCGACGAAGCT 62.118 66.667 15.95 0.00 42.83 3.74
482 486 2.124819 ATTGCAGCTCCGGCAGAG 60.125 61.111 0.00 0.00 46.29 3.35
483 487 2.437180 CATTGCAGCTCCGGCAGA 60.437 61.111 0.00 0.00 43.05 4.26
484 488 1.989966 CTTCATTGCAGCTCCGGCAG 61.990 60.000 0.00 0.00 43.05 4.85
485 489 2.033911 TTCATTGCAGCTCCGGCA 59.966 55.556 0.00 0.00 41.70 5.69
486 490 2.796651 CTTCATTGCAGCTCCGGC 59.203 61.111 0.00 0.00 39.06 6.13
487 491 1.748122 AGCTTCATTGCAGCTCCGG 60.748 57.895 4.90 0.00 44.77 5.14
488 492 3.900855 AGCTTCATTGCAGCTCCG 58.099 55.556 4.90 0.00 44.77 4.63
492 496 2.101770 GCCGAGCTTCATTGCAGC 59.898 61.111 0.00 0.00 37.56 5.25
493 497 2.796651 GGCCGAGCTTCATTGCAG 59.203 61.111 0.00 0.00 34.99 4.41
494 498 3.126879 CGGCCGAGCTTCATTGCA 61.127 61.111 24.07 0.00 34.99 4.08
495 499 3.880846 CCGGCCGAGCTTCATTGC 61.881 66.667 30.73 0.00 0.00 3.56
496 500 2.125147 TCCGGCCGAGCTTCATTG 60.125 61.111 30.73 6.27 0.00 2.82
497 501 2.185310 AACTCCGGCCGAGCTTCATT 62.185 55.000 30.73 7.83 43.01 2.57
498 502 2.660064 AACTCCGGCCGAGCTTCAT 61.660 57.895 30.73 2.43 43.01 2.57
499 503 3.311110 AACTCCGGCCGAGCTTCA 61.311 61.111 30.73 1.39 43.01 3.02
500 504 2.815647 CAACTCCGGCCGAGCTTC 60.816 66.667 30.73 0.00 43.01 3.86
504 508 2.436646 ATTGCAACTCCGGCCGAG 60.437 61.111 30.73 23.54 44.95 4.63
505 509 2.745884 CATTGCAACTCCGGCCGA 60.746 61.111 30.73 12.25 0.00 5.54
506 510 3.814268 CCATTGCAACTCCGGCCG 61.814 66.667 21.04 21.04 0.00 6.13
507 511 2.361104 TCCATTGCAACTCCGGCC 60.361 61.111 0.00 0.00 0.00 6.13
508 512 3.056313 GCTCCATTGCAACTCCGGC 62.056 63.158 0.00 0.00 0.00 6.13
509 513 0.962356 AAGCTCCATTGCAACTCCGG 60.962 55.000 0.00 0.00 34.99 5.14
510 514 0.449388 GAAGCTCCATTGCAACTCCG 59.551 55.000 0.00 0.00 34.99 4.63
511 515 0.449388 CGAAGCTCCATTGCAACTCC 59.551 55.000 0.00 0.00 34.99 3.85
512 516 3.984292 CGAAGCTCCATTGCAACTC 57.016 52.632 0.00 0.00 34.99 3.01
545 549 4.809496 ATTGCAGCCCCGGCAGAG 62.809 66.667 8.74 0.00 43.05 3.35
548 552 4.675161 TTCATTGCAGCCCCGGCA 62.675 61.111 8.74 0.00 44.88 5.69
549 553 3.830192 CTTCATTGCAGCCCCGGC 61.830 66.667 0.00 0.00 42.33 6.13
550 554 3.830192 GCTTCATTGCAGCCCCGG 61.830 66.667 0.00 0.00 0.00 5.73
551 555 2.753043 AGCTTCATTGCAGCCCCG 60.753 61.111 4.61 0.00 38.09 5.73
552 556 2.768492 CGAGCTTCATTGCAGCCCC 61.768 63.158 4.61 0.00 38.09 5.80
553 557 1.746615 TCGAGCTTCATTGCAGCCC 60.747 57.895 4.61 0.00 38.09 5.19
554 558 1.427020 GTCGAGCTTCATTGCAGCC 59.573 57.895 4.61 0.00 38.09 4.85
555 559 1.427020 GGTCGAGCTTCATTGCAGC 59.573 57.895 7.51 0.00 37.56 5.25
556 560 1.699656 CCGGTCGAGCTTCATTGCAG 61.700 60.000 13.48 0.00 34.99 4.41
557 561 1.741401 CCGGTCGAGCTTCATTGCA 60.741 57.895 13.48 0.00 34.99 4.08
558 562 1.424493 CTCCGGTCGAGCTTCATTGC 61.424 60.000 13.48 0.00 0.00 3.56
559 563 0.108615 ACTCCGGTCGAGCTTCATTG 60.109 55.000 13.48 0.00 43.01 2.82
560 564 0.608640 AACTCCGGTCGAGCTTCATT 59.391 50.000 13.48 0.00 43.01 2.57
561 565 0.108615 CAACTCCGGTCGAGCTTCAT 60.109 55.000 13.48 0.00 43.01 2.57
562 566 1.289066 CAACTCCGGTCGAGCTTCA 59.711 57.895 13.48 0.00 43.01 3.02
563 567 2.095252 GCAACTCCGGTCGAGCTTC 61.095 63.158 13.48 0.00 43.01 3.86
564 568 2.048127 GCAACTCCGGTCGAGCTT 60.048 61.111 13.48 0.00 43.01 3.74
565 569 2.172483 ATTGCAACTCCGGTCGAGCT 62.172 55.000 13.48 0.00 43.01 4.09
566 570 1.741770 ATTGCAACTCCGGTCGAGC 60.742 57.895 0.00 4.06 43.01 5.03
567 571 1.361668 CCATTGCAACTCCGGTCGAG 61.362 60.000 0.00 0.00 44.95 4.04
568 572 1.375396 CCATTGCAACTCCGGTCGA 60.375 57.895 0.00 0.00 0.00 4.20
569 573 1.361668 CTCCATTGCAACTCCGGTCG 61.362 60.000 0.00 0.00 0.00 4.79
570 574 1.648467 GCTCCATTGCAACTCCGGTC 61.648 60.000 0.00 0.00 0.00 4.79
571 575 1.675641 GCTCCATTGCAACTCCGGT 60.676 57.895 0.00 0.00 0.00 5.28
572 576 0.962356 AAGCTCCATTGCAACTCCGG 60.962 55.000 0.00 0.00 34.99 5.14
573 577 0.449388 GAAGCTCCATTGCAACTCCG 59.551 55.000 0.00 0.00 34.99 4.63
574 578 0.449388 CGAAGCTCCATTGCAACTCC 59.551 55.000 0.00 0.00 34.99 3.85
575 579 3.984292 CGAAGCTCCATTGCAACTC 57.016 52.632 0.00 0.00 34.99 3.01
596 600 4.664677 ACGCAGCACCGACACTCC 62.665 66.667 2.96 0.00 0.00 3.85
597 601 2.661866 AACGCAGCACCGACACTC 60.662 61.111 2.96 0.00 0.00 3.51
598 602 2.967076 CAACGCAGCACCGACACT 60.967 61.111 2.96 0.00 0.00 3.55
599 603 4.012895 CCAACGCAGCACCGACAC 62.013 66.667 2.96 0.00 0.00 3.67
600 604 4.228567 TCCAACGCAGCACCGACA 62.229 61.111 2.96 0.00 0.00 4.35
601 605 3.414700 CTCCAACGCAGCACCGAC 61.415 66.667 2.96 0.00 0.00 4.79
604 608 3.426568 GAGCTCCAACGCAGCACC 61.427 66.667 0.87 0.00 39.56 5.01
605 609 3.426568 GGAGCTCCAACGCAGCAC 61.427 66.667 28.43 0.00 39.56 4.40
619 623 0.652592 CTATTGCAACTTCGGCGGAG 59.347 55.000 14.98 14.98 0.00 4.63
620 624 0.248012 TCTATTGCAACTTCGGCGGA 59.752 50.000 7.21 0.00 0.00 5.54
621 625 0.652592 CTCTATTGCAACTTCGGCGG 59.347 55.000 7.21 0.00 0.00 6.13
622 626 0.026803 GCTCTATTGCAACTTCGGCG 59.973 55.000 0.00 0.00 0.00 6.46
623 627 1.373570 AGCTCTATTGCAACTTCGGC 58.626 50.000 0.00 3.14 34.99 5.54
624 628 3.665173 GAAGCTCTATTGCAACTTCGG 57.335 47.619 0.00 0.00 34.99 4.30
626 630 3.241804 CGACGAAGCTCTATTGCAACTTC 60.242 47.826 13.88 13.88 34.71 3.01
627 631 2.668457 CGACGAAGCTCTATTGCAACTT 59.332 45.455 0.00 0.00 34.99 2.66
628 632 2.263077 CGACGAAGCTCTATTGCAACT 58.737 47.619 0.00 0.00 34.99 3.16
629 633 1.324736 CCGACGAAGCTCTATTGCAAC 59.675 52.381 0.00 0.00 34.99 4.17
630 634 1.203758 TCCGACGAAGCTCTATTGCAA 59.796 47.619 0.00 0.00 34.99 4.08
631 635 0.815095 TCCGACGAAGCTCTATTGCA 59.185 50.000 0.00 0.00 34.99 4.08
632 636 1.482278 CTCCGACGAAGCTCTATTGC 58.518 55.000 0.00 0.00 0.00 3.56
633 637 1.482278 GCTCCGACGAAGCTCTATTG 58.518 55.000 0.00 0.00 36.80 1.90
634 638 0.029567 CGCTCCGACGAAGCTCTATT 59.970 55.000 4.10 0.00 37.62 1.73
635 639 1.096386 ACGCTCCGACGAAGCTCTAT 61.096 55.000 4.10 0.00 37.62 1.98
636 640 1.703438 GACGCTCCGACGAAGCTCTA 61.703 60.000 4.10 0.00 37.62 2.43
637 641 3.041627 GACGCTCCGACGAAGCTCT 62.042 63.158 4.10 0.00 37.62 4.09
638 642 2.577378 GACGCTCCGACGAAGCTC 60.577 66.667 4.10 0.00 37.62 4.09
639 643 4.462417 CGACGCTCCGACGAAGCT 62.462 66.667 4.10 0.00 46.01 3.74
653 657 3.554692 CTCCAACGCGGCATCGAC 61.555 66.667 12.47 0.00 39.00 4.20
656 660 3.567797 GAGCTCCAACGCGGCATC 61.568 66.667 12.47 0.00 34.40 3.91
685 689 4.794648 TTCCGGCCGGCTCCATTG 62.795 66.667 39.89 13.80 34.68 2.82
686 690 3.358932 AATTCCGGCCGGCTCCATT 62.359 57.895 39.89 27.61 34.68 3.16
687 691 3.809013 AATTCCGGCCGGCTCCAT 61.809 61.111 39.89 23.73 34.68 3.41
688 692 4.794648 CAATTCCGGCCGGCTCCA 62.795 66.667 39.89 20.45 34.68 3.86
693 697 3.814268 CACTGCAATTCCGGCCGG 61.814 66.667 39.13 39.13 0.00 6.13
694 698 3.814268 CCACTGCAATTCCGGCCG 61.814 66.667 21.04 21.04 0.00 6.13
695 699 2.361104 TCCACTGCAATTCCGGCC 60.361 61.111 0.00 0.00 0.00 6.13
696 700 3.056313 GCTCCACTGCAATTCCGGC 62.056 63.158 0.00 0.00 0.00 6.13
697 701 1.372087 GAGCTCCACTGCAATTCCGG 61.372 60.000 0.87 0.00 34.99 5.14
698 702 1.699656 CGAGCTCCACTGCAATTCCG 61.700 60.000 8.47 0.00 34.99 4.30
699 703 0.674895 ACGAGCTCCACTGCAATTCC 60.675 55.000 8.47 0.00 34.99 3.01
700 704 0.723981 GACGAGCTCCACTGCAATTC 59.276 55.000 8.47 0.00 34.99 2.17
701 705 1.016130 CGACGAGCTCCACTGCAATT 61.016 55.000 8.47 0.00 34.99 2.32
702 706 1.446792 CGACGAGCTCCACTGCAAT 60.447 57.895 8.47 0.00 34.99 3.56
703 707 2.049156 CGACGAGCTCCACTGCAA 60.049 61.111 8.47 0.00 34.99 4.08
704 708 4.056125 CCGACGAGCTCCACTGCA 62.056 66.667 8.47 0.00 34.99 4.41
705 709 3.749064 TCCGACGAGCTCCACTGC 61.749 66.667 8.47 0.00 0.00 4.40
706 710 2.179517 GTCCGACGAGCTCCACTG 59.820 66.667 8.47 0.00 0.00 3.66
707 711 3.432588 CGTCCGACGAGCTCCACT 61.433 66.667 16.03 0.00 46.05 4.00
708 712 4.477975 CCGTCCGACGAGCTCCAC 62.478 72.222 22.40 1.23 46.05 4.02
721 725 3.927163 AACCATCACCGACGCCGTC 62.927 63.158 7.29 7.29 0.00 4.79
722 726 3.998672 AACCATCACCGACGCCGT 61.999 61.111 0.00 0.00 0.00 5.68
723 727 3.487202 CAACCATCACCGACGCCG 61.487 66.667 0.00 0.00 0.00 6.46
724 728 3.124921 CCAACCATCACCGACGCC 61.125 66.667 0.00 0.00 0.00 5.68
725 729 2.047655 TCCAACCATCACCGACGC 60.048 61.111 0.00 0.00 0.00 5.19
726 730 2.100631 GCTCCAACCATCACCGACG 61.101 63.158 0.00 0.00 0.00 5.12
727 731 1.003839 TGCTCCAACCATCACCGAC 60.004 57.895 0.00 0.00 0.00 4.79
728 732 1.003839 GTGCTCCAACCATCACCGA 60.004 57.895 0.00 0.00 0.00 4.69
729 733 2.040544 GGTGCTCCAACCATCACCG 61.041 63.158 0.00 0.00 39.46 4.94
730 734 2.040544 CGGTGCTCCAACCATCACC 61.041 63.158 5.52 0.00 44.04 4.02
731 735 2.690778 GCGGTGCTCCAACCATCAC 61.691 63.158 5.52 0.00 40.53 3.06
732 736 2.359850 GCGGTGCTCCAACCATCA 60.360 61.111 5.52 0.00 40.53 3.07
733 737 2.359850 TGCGGTGCTCCAACCATC 60.360 61.111 5.52 0.00 40.53 3.51
734 738 2.672996 GTGCGGTGCTCCAACCAT 60.673 61.111 5.52 0.00 40.53 3.55
735 739 4.182433 TGTGCGGTGCTCCAACCA 62.182 61.111 5.52 0.00 40.53 3.67
736 740 3.357079 CTGTGCGGTGCTCCAACC 61.357 66.667 5.52 0.00 36.82 3.77
737 741 2.591715 ACTGTGCGGTGCTCCAAC 60.592 61.111 5.52 3.30 0.00 3.77
738 742 2.591429 CACTGTGCGGTGCTCCAA 60.591 61.111 5.52 0.00 0.00 3.53
748 752 2.431942 GGCATTGCAGCACTGTGC 60.432 61.111 24.59 24.59 45.46 4.57
749 753 1.372499 GTGGCATTGCAGCACTGTG 60.372 57.895 13.81 2.76 35.83 3.66
750 754 1.183030 ATGTGGCATTGCAGCACTGT 61.183 50.000 13.81 1.67 35.83 3.55
751 755 0.457853 GATGTGGCATTGCAGCACTG 60.458 55.000 11.39 8.38 35.83 3.66
752 756 1.888018 GATGTGGCATTGCAGCACT 59.112 52.632 11.39 0.00 35.83 4.40
753 757 1.515519 CGATGTGGCATTGCAGCAC 60.516 57.895 11.39 10.64 35.83 4.40
754 758 1.525718 AACGATGTGGCATTGCAGCA 61.526 50.000 11.39 8.77 35.83 4.41
755 759 1.074319 CAACGATGTGGCATTGCAGC 61.074 55.000 11.39 2.92 0.00 5.25
756 760 0.522626 TCAACGATGTGGCATTGCAG 59.477 50.000 11.39 0.00 0.00 4.41
757 761 0.957362 TTCAACGATGTGGCATTGCA 59.043 45.000 11.39 0.00 0.00 4.08
758 762 1.068333 ACTTCAACGATGTGGCATTGC 60.068 47.619 0.00 0.00 0.00 3.56
759 763 2.981805 CAACTTCAACGATGTGGCATTG 59.018 45.455 0.00 0.00 0.00 2.82
760 764 2.622942 ACAACTTCAACGATGTGGCATT 59.377 40.909 0.00 0.00 0.00 3.56
761 765 2.226437 GACAACTTCAACGATGTGGCAT 59.774 45.455 0.00 0.00 0.00 4.40
762 766 1.601903 GACAACTTCAACGATGTGGCA 59.398 47.619 0.00 0.00 0.00 4.92
763 767 1.398451 CGACAACTTCAACGATGTGGC 60.398 52.381 0.00 0.00 0.00 5.01
764 768 1.864711 ACGACAACTTCAACGATGTGG 59.135 47.619 0.00 0.00 0.00 4.17
765 769 2.538037 TCACGACAACTTCAACGATGTG 59.462 45.455 0.00 0.00 0.00 3.21
766 770 2.816689 TCACGACAACTTCAACGATGT 58.183 42.857 0.00 0.00 0.00 3.06
767 771 3.184379 ACATCACGACAACTTCAACGATG 59.816 43.478 0.00 0.00 0.00 3.84
768 772 3.390135 ACATCACGACAACTTCAACGAT 58.610 40.909 0.00 0.00 0.00 3.73
769 773 2.816689 ACATCACGACAACTTCAACGA 58.183 42.857 0.00 0.00 0.00 3.85
770 774 3.734231 AGTACATCACGACAACTTCAACG 59.266 43.478 0.00 0.00 0.00 4.10
771 775 4.608445 GCAGTACATCACGACAACTTCAAC 60.608 45.833 0.00 0.00 0.00 3.18
772 776 3.493129 GCAGTACATCACGACAACTTCAA 59.507 43.478 0.00 0.00 0.00 2.69
773 777 3.057019 GCAGTACATCACGACAACTTCA 58.943 45.455 0.00 0.00 0.00 3.02
774 778 3.121944 CAGCAGTACATCACGACAACTTC 59.878 47.826 0.00 0.00 0.00 3.01
775 779 3.059884 CAGCAGTACATCACGACAACTT 58.940 45.455 0.00 0.00 0.00 2.66
776 780 2.677199 CAGCAGTACATCACGACAACT 58.323 47.619 0.00 0.00 0.00 3.16
777 781 1.126846 GCAGCAGTACATCACGACAAC 59.873 52.381 0.00 0.00 0.00 3.32
778 782 1.428448 GCAGCAGTACATCACGACAA 58.572 50.000 0.00 0.00 0.00 3.18
779 783 0.389817 GGCAGCAGTACATCACGACA 60.390 55.000 0.00 0.00 0.00 4.35
780 784 1.413767 CGGCAGCAGTACATCACGAC 61.414 60.000 0.00 0.00 0.00 4.34
781 785 1.153842 CGGCAGCAGTACATCACGA 60.154 57.895 0.00 0.00 0.00 4.35
782 786 1.446099 ACGGCAGCAGTACATCACG 60.446 57.895 0.00 0.00 0.00 4.35
783 787 1.361668 CCACGGCAGCAGTACATCAC 61.362 60.000 0.00 0.00 0.00 3.06
784 788 1.079197 CCACGGCAGCAGTACATCA 60.079 57.895 0.00 0.00 0.00 3.07
785 789 2.464459 GCCACGGCAGCAGTACATC 61.464 63.158 2.36 0.00 41.49 3.06
786 790 2.436646 GCCACGGCAGCAGTACAT 60.437 61.111 2.36 0.00 41.49 2.29
789 793 4.308458 AACGCCACGGCAGCAGTA 62.308 61.111 9.11 0.00 42.06 2.74
793 797 4.980903 CAACAACGCCACGGCAGC 62.981 66.667 9.11 0.00 42.06 5.25
794 798 3.582120 ACAACAACGCCACGGCAG 61.582 61.111 9.11 3.71 42.06 4.85
795 799 3.882013 CACAACAACGCCACGGCA 61.882 61.111 9.11 0.00 42.06 5.69
796 800 4.622456 CCACAACAACGCCACGGC 62.622 66.667 0.00 0.00 37.85 5.68
797 801 3.175976 GACCACAACAACGCCACGG 62.176 63.158 0.00 0.00 0.00 4.94
798 802 1.983196 TTGACCACAACAACGCCACG 61.983 55.000 0.00 0.00 0.00 4.94
799 803 0.171455 TTTGACCACAACAACGCCAC 59.829 50.000 0.00 0.00 35.63 5.01
800 804 0.171455 GTTTGACCACAACAACGCCA 59.829 50.000 0.00 0.00 35.63 5.69
801 805 0.863957 CGTTTGACCACAACAACGCC 60.864 55.000 0.00 0.00 34.88 5.68
802 806 0.863957 CCGTTTGACCACAACAACGC 60.864 55.000 0.00 0.00 38.27 4.84
803 807 0.863957 GCCGTTTGACCACAACAACG 60.864 55.000 0.00 0.00 38.87 4.10
804 808 0.526739 GGCCGTTTGACCACAACAAC 60.527 55.000 0.00 0.00 35.63 3.32
805 809 0.681564 AGGCCGTTTGACCACAACAA 60.682 50.000 0.00 0.00 35.63 2.83
806 810 0.180642 TAGGCCGTTTGACCACAACA 59.819 50.000 0.00 0.00 35.63 3.33
807 811 0.872388 CTAGGCCGTTTGACCACAAC 59.128 55.000 0.00 0.00 35.63 3.32
808 812 0.887387 GCTAGGCCGTTTGACCACAA 60.887 55.000 0.00 0.00 0.00 3.33
809 813 1.302192 GCTAGGCCGTTTGACCACA 60.302 57.895 0.00 0.00 0.00 4.17
810 814 1.302192 TGCTAGGCCGTTTGACCAC 60.302 57.895 0.00 0.00 0.00 4.16
811 815 1.302192 GTGCTAGGCCGTTTGACCA 60.302 57.895 0.00 0.00 0.00 4.02
812 816 2.388232 CGTGCTAGGCCGTTTGACC 61.388 63.158 0.00 0.00 0.00 4.02
813 817 3.023591 GCGTGCTAGGCCGTTTGAC 62.024 63.158 0.00 0.00 0.00 3.18
814 818 2.740826 GCGTGCTAGGCCGTTTGA 60.741 61.111 0.00 0.00 0.00 2.69
815 819 2.742372 AGCGTGCTAGGCCGTTTG 60.742 61.111 0.00 0.00 0.00 2.93
816 820 2.521958 ATCAGCGTGCTAGGCCGTTT 62.522 55.000 0.00 0.00 0.00 3.60
817 821 2.907897 GATCAGCGTGCTAGGCCGTT 62.908 60.000 0.00 0.00 0.00 4.44
818 822 3.432051 GATCAGCGTGCTAGGCCGT 62.432 63.158 0.00 0.00 0.00 5.68
819 823 2.659897 GATCAGCGTGCTAGGCCG 60.660 66.667 0.00 0.00 0.00 6.13
820 824 2.659897 CGATCAGCGTGCTAGGCC 60.660 66.667 0.00 0.00 34.64 5.19
821 825 2.659897 CCGATCAGCGTGCTAGGC 60.660 66.667 0.00 0.00 38.67 3.93
822 826 1.299468 GTCCGATCAGCGTGCTAGG 60.299 63.158 0.00 0.00 38.67 3.02
823 827 1.655654 CGTCCGATCAGCGTGCTAG 60.656 63.158 0.00 0.00 38.67 3.42
824 828 2.407616 CGTCCGATCAGCGTGCTA 59.592 61.111 0.00 0.00 38.67 3.49
825 829 4.498520 CCGTCCGATCAGCGTGCT 62.499 66.667 0.00 0.00 38.67 4.40
827 831 4.498520 AGCCGTCCGATCAGCGTG 62.499 66.667 0.00 0.00 38.67 5.34
828 832 4.498520 CAGCCGTCCGATCAGCGT 62.499 66.667 0.00 0.00 38.67 5.07
829 833 3.699955 TTCAGCCGTCCGATCAGCG 62.700 63.158 0.00 0.00 40.47 5.18
830 834 2.167861 GTTCAGCCGTCCGATCAGC 61.168 63.158 0.00 0.00 0.00 4.26
831 835 0.803768 CTGTTCAGCCGTCCGATCAG 60.804 60.000 0.00 0.00 0.00 2.90
832 836 1.215382 CTGTTCAGCCGTCCGATCA 59.785 57.895 0.00 0.00 0.00 2.92
833 837 1.519455 CCTGTTCAGCCGTCCGATC 60.519 63.158 0.00 0.00 0.00 3.69
834 838 2.579201 CCTGTTCAGCCGTCCGAT 59.421 61.111 0.00 0.00 0.00 4.18
835 839 4.373116 GCCTGTTCAGCCGTCCGA 62.373 66.667 0.00 0.00 0.00 4.55
838 842 3.665675 ATCCGCCTGTTCAGCCGTC 62.666 63.158 2.82 0.00 0.00 4.79
839 843 3.706373 ATCCGCCTGTTCAGCCGT 61.706 61.111 2.82 0.00 0.00 5.68
840 844 3.197790 CATCCGCCTGTTCAGCCG 61.198 66.667 0.00 0.00 0.00 5.52
841 845 3.512516 GCATCCGCCTGTTCAGCC 61.513 66.667 0.00 0.00 0.00 4.85
842 846 2.437359 AGCATCCGCCTGTTCAGC 60.437 61.111 0.00 0.00 39.83 4.26
843 847 0.463295 ATCAGCATCCGCCTGTTCAG 60.463 55.000 0.00 0.00 39.83 3.02
844 848 0.035152 AATCAGCATCCGCCTGTTCA 60.035 50.000 0.00 0.00 39.83 3.18
845 849 1.098050 AAATCAGCATCCGCCTGTTC 58.902 50.000 0.00 0.00 39.83 3.18
846 850 0.813184 CAAATCAGCATCCGCCTGTT 59.187 50.000 0.00 0.00 39.83 3.16
847 851 0.322816 ACAAATCAGCATCCGCCTGT 60.323 50.000 0.00 0.00 39.83 4.00
848 852 1.600957 CTACAAATCAGCATCCGCCTG 59.399 52.381 0.00 0.00 39.83 4.85
849 853 1.210478 ACTACAAATCAGCATCCGCCT 59.790 47.619 0.00 0.00 39.83 5.52
850 854 1.668419 ACTACAAATCAGCATCCGCC 58.332 50.000 0.00 0.00 39.83 6.13
851 855 3.302480 CGTTACTACAAATCAGCATCCGC 60.302 47.826 0.00 0.00 38.99 5.54
852 856 3.302480 GCGTTACTACAAATCAGCATCCG 60.302 47.826 0.00 0.00 0.00 4.18
853 857 3.002348 GGCGTTACTACAAATCAGCATCC 59.998 47.826 0.00 0.00 0.00 3.51
854 858 3.002348 GGGCGTTACTACAAATCAGCATC 59.998 47.826 0.00 0.00 0.00 3.91
855 859 2.943033 GGGCGTTACTACAAATCAGCAT 59.057 45.455 0.00 0.00 0.00 3.79
856 860 2.027561 AGGGCGTTACTACAAATCAGCA 60.028 45.455 0.00 0.00 0.00 4.41
857 861 2.629051 AGGGCGTTACTACAAATCAGC 58.371 47.619 0.00 0.00 0.00 4.26
858 862 6.730960 TTTTAGGGCGTTACTACAAATCAG 57.269 37.500 0.00 0.00 0.00 2.90
888 892 0.463833 TCTCATGCCTCGCTCGTAGA 60.464 55.000 0.00 0.00 0.00 2.59
889 893 0.382158 TTCTCATGCCTCGCTCGTAG 59.618 55.000 0.00 0.00 0.00 3.51
890 894 1.032794 ATTCTCATGCCTCGCTCGTA 58.967 50.000 0.00 0.00 0.00 3.43
891 895 1.000827 CTATTCTCATGCCTCGCTCGT 60.001 52.381 0.00 0.00 0.00 4.18
892 896 1.668337 CCTATTCTCATGCCTCGCTCG 60.668 57.143 0.00 0.00 0.00 5.03
893 897 1.615883 TCCTATTCTCATGCCTCGCTC 59.384 52.381 0.00 0.00 0.00 5.03
894 898 1.709578 TCCTATTCTCATGCCTCGCT 58.290 50.000 0.00 0.00 0.00 4.93
895 899 2.036475 TCTTCCTATTCTCATGCCTCGC 59.964 50.000 0.00 0.00 0.00 5.03
896 900 4.533919 ATCTTCCTATTCTCATGCCTCG 57.466 45.455 0.00 0.00 0.00 4.63
897 901 5.472820 CCAAATCTTCCTATTCTCATGCCTC 59.527 44.000 0.00 0.00 0.00 4.70
923 927 0.249073 CGAATCGGGTACTGCTGGAG 60.249 60.000 0.00 0.00 32.53 3.86
926 930 4.420143 CCGAATCGGGTACTGCTG 57.580 61.111 14.91 0.00 44.15 4.41
979 983 3.054434 TGGAGTTTGATATGGGTGAGGTG 60.054 47.826 0.00 0.00 0.00 4.00
983 987 3.262151 TCGTTGGAGTTTGATATGGGTGA 59.738 43.478 0.00 0.00 0.00 4.02
986 990 4.708177 AGATCGTTGGAGTTTGATATGGG 58.292 43.478 0.00 0.00 0.00 4.00
1004 1008 4.202060 TGTTTGAGATGCTACGAGGAGATC 60.202 45.833 0.00 0.00 0.00 2.75
1045 3989 2.279517 GACGCCATAGCAGGTCCG 60.280 66.667 0.00 0.00 39.83 4.79
1133 4083 2.755876 TCCAGTGAGATCGCGGCT 60.756 61.111 6.13 3.76 0.00 5.52
1182 4132 2.673368 GCGGAGTTTGTGGATCTAAGTG 59.327 50.000 0.00 0.00 0.00 3.16
1273 4230 1.299976 GCCGACAGTCAAAGGGGAT 59.700 57.895 0.41 0.00 0.00 3.85
1366 4330 3.369546 AACTGTAATTTGTGCTGCCAC 57.630 42.857 0.00 0.00 42.40 5.01
1572 4882 3.054361 AGCTCCTACCGGATTTGTTGAAT 60.054 43.478 9.46 0.00 39.01 2.57
1740 5124 1.523032 GGGGCCCTCGTATGTTTCG 60.523 63.158 24.38 0.00 0.00 3.46
1745 5129 1.817941 CAAACGGGGCCCTCGTATG 60.818 63.158 30.55 16.93 40.18 2.39
1749 5133 2.260088 TTATCCAAACGGGGCCCTCG 62.260 60.000 24.38 25.06 37.22 4.63
1786 5170 3.803778 CGTGTACAACCGTTTCTTTAGGT 59.196 43.478 0.00 0.00 40.50 3.08
1805 5189 4.606232 GCAATCGTATTTACTGCTAGCGTG 60.606 45.833 18.37 12.75 0.00 5.34
1827 5211 2.575532 TGGCAGGCAGATTACAATAGC 58.424 47.619 0.00 0.00 0.00 2.97
1868 5282 6.016527 CACATTGATTACCATCTAGCAAGCAT 60.017 38.462 0.00 0.00 0.00 3.79
1869 5283 5.297527 CACATTGATTACCATCTAGCAAGCA 59.702 40.000 0.00 0.00 0.00 3.91
1888 5302 0.110486 AGCTCGGGGTTCAACACATT 59.890 50.000 0.00 0.00 0.00 2.71
1922 5339 8.556213 TGTTACGGTTCTTAGCAGATTTATTT 57.444 30.769 0.00 0.00 0.00 1.40
1930 5347 5.671329 GCAGATTTGTTACGGTTCTTAGCAG 60.671 44.000 0.00 0.00 0.00 4.24
1934 5351 3.680937 CGGCAGATTTGTTACGGTTCTTA 59.319 43.478 0.00 0.00 0.00 2.10
1986 5403 1.148157 CCTCGTTGTCGCCATAGCTG 61.148 60.000 0.00 0.00 36.60 4.24
1988 5405 0.459585 TTCCTCGTTGTCGCCATAGC 60.460 55.000 0.00 0.00 36.96 2.97
1992 5409 1.135199 GTATCTTCCTCGTTGTCGCCA 60.135 52.381 0.00 0.00 36.96 5.69
1998 5415 2.194271 GAAGCGGTATCTTCCTCGTTG 58.806 52.381 0.00 0.00 37.17 4.10
1999 5416 2.580966 GAAGCGGTATCTTCCTCGTT 57.419 50.000 0.00 0.00 37.17 3.85
2009 5467 1.065418 CCTGGAGTTTGGAAGCGGTAT 60.065 52.381 0.00 0.00 0.00 2.73
2010 5468 0.323629 CCTGGAGTTTGGAAGCGGTA 59.676 55.000 0.00 0.00 0.00 4.02
2014 5472 1.578206 GCGACCTGGAGTTTGGAAGC 61.578 60.000 0.00 0.00 0.00 3.86
2147 5660 1.265635 CAAAACGAAGCATGACGGGAA 59.734 47.619 0.00 0.00 0.00 3.97
2149 5662 0.109781 CCAAAACGAAGCATGACGGG 60.110 55.000 0.00 0.00 0.00 5.28
2152 5665 1.880027 AGACCCAAAACGAAGCATGAC 59.120 47.619 0.00 0.00 0.00 3.06
2172 5686 1.751351 CGACTAGATCTGGAGCACCAA 59.249 52.381 13.73 0.00 46.32 3.67
2200 5714 1.288633 TGACCCCAGAATCCATTGCAT 59.711 47.619 0.00 0.00 0.00 3.96
2205 5719 1.417890 GTCGATGACCCCAGAATCCAT 59.582 52.381 0.00 0.00 0.00 3.41
2220 5734 2.102084 CACACATCCCATCTCTGTCGAT 59.898 50.000 0.00 0.00 0.00 3.59
2264 5778 2.171489 GAAAAGGACGCGAGCACACC 62.171 60.000 15.93 6.12 0.00 4.16
2273 5787 2.093658 TGGGATGACTAGAAAAGGACGC 60.094 50.000 0.00 0.00 0.00 5.19
2281 5795 4.140447 AGGGATATGGTGGGATGACTAGAA 60.140 45.833 0.00 0.00 0.00 2.10
2324 5838 2.359478 AACCACGTTGGATCGGGC 60.359 61.111 10.46 0.00 40.96 6.13
2327 5841 1.076332 GAAGGAACCACGTTGGATCG 58.924 55.000 10.46 0.00 39.90 3.69
2344 5858 3.170717 AGACGGGACCACTAAATCTGAA 58.829 45.455 0.00 0.00 0.00 3.02
2351 5865 0.113776 ACAGGAGACGGGACCACTAA 59.886 55.000 0.00 0.00 0.00 2.24
2357 5871 1.939769 GAGCTGACAGGAGACGGGAC 61.940 65.000 4.26 0.00 0.00 4.46
2361 5875 1.102154 AGATGAGCTGACAGGAGACG 58.898 55.000 4.26 0.00 0.00 4.18
2391 5905 1.134965 CAACCAACGACAAAGGCCAAA 60.135 47.619 5.01 0.00 0.00 3.28
2416 5930 0.817634 CTCCAACGACCAACAAGCCA 60.818 55.000 0.00 0.00 0.00 4.75
2429 5944 5.241662 AGCAAAAGACATCTAGACTCCAAC 58.758 41.667 0.00 0.00 0.00 3.77
2457 5973 2.332514 CGTACACGACCACACCGT 59.667 61.111 0.00 0.00 43.02 4.83
2473 5989 1.842381 AAGAAGAGGCAGAACCCCCG 61.842 60.000 0.00 0.00 40.58 5.73
2479 5995 0.608640 GGGACGAAGAAGAGGCAGAA 59.391 55.000 0.00 0.00 0.00 3.02
2482 5998 3.388841 GGGGACGAAGAAGAGGCA 58.611 61.111 0.00 0.00 0.00 4.75
2494 6010 2.124695 GGCAGAACCATCGGGGAC 60.125 66.667 0.84 0.00 41.15 4.46
2500 6016 0.890683 CAACAAGGGGCAGAACCATC 59.109 55.000 0.00 0.00 42.05 3.51
2518 6034 0.882927 GACGCCAACCACAACTAGCA 60.883 55.000 0.00 0.00 0.00 3.49
2520 6036 0.599204 ACGACGCCAACCACAACTAG 60.599 55.000 0.00 0.00 0.00 2.57
2554 6070 0.179073 CATGGGAAGTAGGAGGCACG 60.179 60.000 0.00 0.00 0.00 5.34
2581 6098 0.774908 AGGTTCATGGGACGGGAAAA 59.225 50.000 0.00 0.00 0.00 2.29
2589 6106 3.048600 CAATAGGAGGAGGTTCATGGGA 58.951 50.000 0.00 0.00 0.00 4.37
2596 6113 1.916181 CCCACACAATAGGAGGAGGTT 59.084 52.381 0.00 0.00 0.00 3.50
2597 6114 1.203440 ACCCACACAATAGGAGGAGGT 60.203 52.381 0.00 0.00 0.00 3.85
2609 6126 4.202574 CCAGCCACCACCCACACA 62.203 66.667 0.00 0.00 0.00 3.72
2611 6128 1.850289 ATACCAGCCACCACCCACA 60.850 57.895 0.00 0.00 0.00 4.17
2612 6129 1.378514 CATACCAGCCACCACCCAC 60.379 63.158 0.00 0.00 0.00 4.61
2614 6131 2.275418 CCATACCAGCCACCACCC 59.725 66.667 0.00 0.00 0.00 4.61
2623 6140 0.874607 GCCTAACGTCGCCATACCAG 60.875 60.000 0.00 0.00 0.00 4.00
2629 6146 1.666553 CACAAGCCTAACGTCGCCA 60.667 57.895 0.00 0.00 0.00 5.69
2634 6151 1.140252 ACAAGACCACAAGCCTAACGT 59.860 47.619 0.00 0.00 0.00 3.99
2635 6152 1.531149 CACAAGACCACAAGCCTAACG 59.469 52.381 0.00 0.00 0.00 3.18
2636 6153 1.880027 CCACAAGACCACAAGCCTAAC 59.120 52.381 0.00 0.00 0.00 2.34
2639 6156 1.529244 GCCACAAGACCACAAGCCT 60.529 57.895 0.00 0.00 0.00 4.58
2648 6165 1.461127 GACGTCAATGAGCCACAAGAC 59.539 52.381 11.55 0.00 35.63 3.01
2653 6170 1.781555 CACGACGTCAATGAGCCAC 59.218 57.895 17.16 0.00 0.00 5.01
2687 6204 4.929808 CCACTAGTATTGAGTGAACACCAC 59.070 45.833 0.00 0.00 46.01 4.16
2695 6212 5.043903 CGATTCCACCACTAGTATTGAGTG 58.956 45.833 0.00 0.00 43.32 3.51
2696 6213 4.710375 ACGATTCCACCACTAGTATTGAGT 59.290 41.667 0.00 0.00 0.00 3.41
2697 6214 5.263968 ACGATTCCACCACTAGTATTGAG 57.736 43.478 0.00 0.00 0.00 3.02
2699 6216 5.968387 GAACGATTCCACCACTAGTATTG 57.032 43.478 0.00 0.00 0.00 1.90
2715 6232 3.674997 ACACAAGCAACATAGGAACGAT 58.325 40.909 0.00 0.00 0.00 3.73
2718 6235 4.219033 CGAAACACAAGCAACATAGGAAC 58.781 43.478 0.00 0.00 0.00 3.62
2720 6237 3.472652 ACGAAACACAAGCAACATAGGA 58.527 40.909 0.00 0.00 0.00 2.94
2724 6241 1.668751 ACGACGAAACACAAGCAACAT 59.331 42.857 0.00 0.00 0.00 2.71
2733 6250 2.412421 ACCTGACTACGACGAAACAC 57.588 50.000 0.00 0.00 0.00 3.32
2734 6251 3.117794 CAAACCTGACTACGACGAAACA 58.882 45.455 0.00 0.00 0.00 2.83
2735 6252 2.473984 CCAAACCTGACTACGACGAAAC 59.526 50.000 0.00 0.00 0.00 2.78
2736 6253 2.546373 CCCAAACCTGACTACGACGAAA 60.546 50.000 0.00 0.00 0.00 3.46
2737 6254 1.000060 CCCAAACCTGACTACGACGAA 60.000 52.381 0.00 0.00 0.00 3.85
2738 6255 0.599558 CCCAAACCTGACTACGACGA 59.400 55.000 0.00 0.00 0.00 4.20
2739 6256 0.316204 ACCCAAACCTGACTACGACG 59.684 55.000 0.00 0.00 0.00 5.12
2740 6257 1.668047 CGACCCAAACCTGACTACGAC 60.668 57.143 0.00 0.00 0.00 4.34
2741 6258 0.599558 CGACCCAAACCTGACTACGA 59.400 55.000 0.00 0.00 0.00 3.43
2742 6259 0.316204 ACGACCCAAACCTGACTACG 59.684 55.000 0.00 0.00 0.00 3.51
2743 6260 1.069668 ACACGACCCAAACCTGACTAC 59.930 52.381 0.00 0.00 0.00 2.73
2744 6261 1.069513 CACACGACCCAAACCTGACTA 59.930 52.381 0.00 0.00 0.00 2.59
2745 6262 0.179056 CACACGACCCAAACCTGACT 60.179 55.000 0.00 0.00 0.00 3.41
2746 6263 1.782028 GCACACGACCCAAACCTGAC 61.782 60.000 0.00 0.00 0.00 3.51
2747 6264 1.525077 GCACACGACCCAAACCTGA 60.525 57.895 0.00 0.00 0.00 3.86
2748 6265 1.101049 AAGCACACGACCCAAACCTG 61.101 55.000 0.00 0.00 0.00 4.00
2749 6266 1.101049 CAAGCACACGACCCAAACCT 61.101 55.000 0.00 0.00 0.00 3.50
2750 6267 1.358759 CAAGCACACGACCCAAACC 59.641 57.895 0.00 0.00 0.00 3.27
2751 6268 1.299089 GCAAGCACACGACCCAAAC 60.299 57.895 0.00 0.00 0.00 2.93
2752 6269 2.485795 GGCAAGCACACGACCCAAA 61.486 57.895 0.00 0.00 0.00 3.28
2753 6270 2.904866 GGCAAGCACACGACCCAA 60.905 61.111 0.00 0.00 0.00 4.12
2757 6274 3.276846 AACCGGCAAGCACACGAC 61.277 61.111 0.00 0.00 0.00 4.34
2758 6275 3.276091 CAACCGGCAAGCACACGA 61.276 61.111 0.00 0.00 0.00 4.35
2759 6276 3.119709 AACAACCGGCAAGCACACG 62.120 57.895 0.00 0.00 0.00 4.49
2760 6277 1.588667 CAACAACCGGCAAGCACAC 60.589 57.895 0.00 0.00 0.00 3.82
2761 6278 0.748367 TACAACAACCGGCAAGCACA 60.748 50.000 0.00 0.00 0.00 4.57
2762 6279 0.596082 ATACAACAACCGGCAAGCAC 59.404 50.000 0.00 0.00 0.00 4.40
2763 6280 0.595588 CATACAACAACCGGCAAGCA 59.404 50.000 0.00 0.00 0.00 3.91
2764 6281 0.596082 ACATACAACAACCGGCAAGC 59.404 50.000 0.00 0.00 0.00 4.01
2765 6282 4.394920 AGAATACATACAACAACCGGCAAG 59.605 41.667 0.00 0.00 0.00 4.01
2766 6283 4.328536 AGAATACATACAACAACCGGCAA 58.671 39.130 0.00 0.00 0.00 4.52
2767 6284 3.945346 AGAATACATACAACAACCGGCA 58.055 40.909 0.00 0.00 0.00 5.69
2768 6285 4.957759 AAGAATACATACAACAACCGGC 57.042 40.909 0.00 0.00 0.00 6.13
2769 6286 8.761497 CACTATAAGAATACATACAACAACCGG 58.239 37.037 0.00 0.00 0.00 5.28
2770 6287 8.761497 CCACTATAAGAATACATACAACAACCG 58.239 37.037 0.00 0.00 0.00 4.44
2771 6288 9.826574 TCCACTATAAGAATACATACAACAACC 57.173 33.333 0.00 0.00 0.00 3.77
2810 6327 1.112315 AGCGGGACACATGGCAAAAA 61.112 50.000 0.00 0.00 0.00 1.94
2811 6328 1.523154 GAGCGGGACACATGGCAAAA 61.523 55.000 0.00 0.00 0.00 2.44
2812 6329 1.971167 GAGCGGGACACATGGCAAA 60.971 57.895 0.00 0.00 0.00 3.68
2813 6330 2.359850 GAGCGGGACACATGGCAA 60.360 61.111 0.00 0.00 0.00 4.52
2814 6331 4.408821 GGAGCGGGACACATGGCA 62.409 66.667 0.00 0.00 0.00 4.92
2815 6332 4.101448 AGGAGCGGGACACATGGC 62.101 66.667 0.00 0.00 0.00 4.40
2816 6333 2.124983 CAGGAGCGGGACACATGG 60.125 66.667 0.00 0.00 0.00 3.66
2817 6334 2.124983 CCAGGAGCGGGACACATG 60.125 66.667 0.00 0.00 0.00 3.21
2818 6335 2.607750 ACCAGGAGCGGGACACAT 60.608 61.111 0.00 0.00 0.00 3.21
2819 6336 2.435120 TAGACCAGGAGCGGGACACA 62.435 60.000 0.00 0.00 0.00 3.72
2820 6337 1.668101 CTAGACCAGGAGCGGGACAC 61.668 65.000 0.00 0.00 0.00 3.67
2821 6338 1.379977 CTAGACCAGGAGCGGGACA 60.380 63.158 0.00 0.00 0.00 4.02
2822 6339 1.380112 ACTAGACCAGGAGCGGGAC 60.380 63.158 0.00 0.00 0.00 4.46
2823 6340 1.076923 GACTAGACCAGGAGCGGGA 60.077 63.158 0.00 0.00 0.00 5.14
2824 6341 0.183014 TAGACTAGACCAGGAGCGGG 59.817 60.000 0.00 0.00 0.00 6.13
2825 6342 1.600023 CTAGACTAGACCAGGAGCGG 58.400 60.000 3.13 0.00 0.00 5.52
2826 6343 1.134037 ACCTAGACTAGACCAGGAGCG 60.134 57.143 13.02 0.00 32.25 5.03
2827 6344 2.691011 CAACCTAGACTAGACCAGGAGC 59.309 54.545 13.02 0.00 32.25 4.70
2828 6345 3.292460 CCAACCTAGACTAGACCAGGAG 58.708 54.545 13.02 5.57 32.25 3.69
2829 6346 2.024273 CCCAACCTAGACTAGACCAGGA 60.024 54.545 13.02 0.00 32.25 3.86
2830 6347 2.292323 ACCCAACCTAGACTAGACCAGG 60.292 54.545 11.27 5.24 0.00 4.45
2831 6348 3.103080 ACCCAACCTAGACTAGACCAG 57.897 52.381 11.27 0.00 0.00 4.00
2832 6349 3.555117 AACCCAACCTAGACTAGACCA 57.445 47.619 11.27 0.00 0.00 4.02
2833 6350 3.379688 CGTAACCCAACCTAGACTAGACC 59.620 52.174 11.27 0.00 0.00 3.85
2834 6351 4.013050 ACGTAACCCAACCTAGACTAGAC 58.987 47.826 11.27 0.00 0.00 2.59
2835 6352 4.012374 CACGTAACCCAACCTAGACTAGA 58.988 47.826 11.27 0.00 0.00 2.43
2836 6353 3.129988 CCACGTAACCCAACCTAGACTAG 59.870 52.174 2.18 2.18 0.00 2.57
2837 6354 3.091545 CCACGTAACCCAACCTAGACTA 58.908 50.000 0.00 0.00 0.00 2.59
2838 6355 1.897802 CCACGTAACCCAACCTAGACT 59.102 52.381 0.00 0.00 0.00 3.24
2839 6356 1.620323 ACCACGTAACCCAACCTAGAC 59.380 52.381 0.00 0.00 0.00 2.59
2840 6357 1.895131 GACCACGTAACCCAACCTAGA 59.105 52.381 0.00 0.00 0.00 2.43
2841 6358 1.897802 AGACCACGTAACCCAACCTAG 59.102 52.381 0.00 0.00 0.00 3.02
2842 6359 2.014010 AGACCACGTAACCCAACCTA 57.986 50.000 0.00 0.00 0.00 3.08
2843 6360 1.071228 GAAGACCACGTAACCCAACCT 59.929 52.381 0.00 0.00 0.00 3.50
2844 6361 1.071228 AGAAGACCACGTAACCCAACC 59.929 52.381 0.00 0.00 0.00 3.77
2845 6362 2.140717 CAGAAGACCACGTAACCCAAC 58.859 52.381 0.00 0.00 0.00 3.77
2846 6363 1.071071 CCAGAAGACCACGTAACCCAA 59.929 52.381 0.00 0.00 0.00 4.12
2847 6364 0.682852 CCAGAAGACCACGTAACCCA 59.317 55.000 0.00 0.00 0.00 4.51
2848 6365 0.683412 ACCAGAAGACCACGTAACCC 59.317 55.000 0.00 0.00 0.00 4.11
2849 6366 1.668047 CGACCAGAAGACCACGTAACC 60.668 57.143 0.00 0.00 0.00 2.85
2850 6367 1.694639 CGACCAGAAGACCACGTAAC 58.305 55.000 0.00 0.00 0.00 2.50
2851 6368 0.038892 GCGACCAGAAGACCACGTAA 60.039 55.000 0.00 0.00 0.00 3.18
2852 6369 1.582968 GCGACCAGAAGACCACGTA 59.417 57.895 0.00 0.00 0.00 3.57
2853 6370 2.338984 GCGACCAGAAGACCACGT 59.661 61.111 0.00 0.00 0.00 4.49
2854 6371 2.742710 TTCGCGACCAGAAGACCACG 62.743 60.000 9.15 0.00 0.00 4.94
2855 6372 0.389948 ATTCGCGACCAGAAGACCAC 60.390 55.000 9.15 0.00 0.00 4.16
2856 6373 0.108804 GATTCGCGACCAGAAGACCA 60.109 55.000 9.15 0.00 0.00 4.02
2857 6374 1.140407 CGATTCGCGACCAGAAGACC 61.140 60.000 9.15 0.00 44.57 3.85
2858 6375 0.456312 ACGATTCGCGACCAGAAGAC 60.456 55.000 9.15 0.00 44.57 3.01
2859 6376 0.242825 AACGATTCGCGACCAGAAGA 59.757 50.000 9.15 0.00 44.57 2.87
2860 6377 0.366871 CAACGATTCGCGACCAGAAG 59.633 55.000 9.15 0.00 44.57 2.85
2861 6378 0.038983 TCAACGATTCGCGACCAGAA 60.039 50.000 9.15 0.00 44.57 3.02
2862 6379 0.172578 ATCAACGATTCGCGACCAGA 59.827 50.000 9.15 1.43 44.57 3.86
2863 6380 0.999406 AATCAACGATTCGCGACCAG 59.001 50.000 9.15 5.18 44.57 4.00
2864 6381 1.434555 AAATCAACGATTCGCGACCA 58.565 45.000 9.15 0.00 44.57 4.02
2865 6382 2.520686 AAAATCAACGATTCGCGACC 57.479 45.000 9.15 2.36 44.57 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.