Multiple sequence alignment - TraesCS5D01G087600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G087600 chr5D 100.000 5905 0 0 1 5905 93060386 93066290 0.000000e+00 10905
1 TraesCS5D01G087600 chr5D 93.365 211 14 0 1 211 275166104 275165894 4.440000e-81 313
2 TraesCS5D01G087600 chr5A 96.601 2118 61 9 2026 4140 86659921 86662030 0.000000e+00 3502
3 TraesCS5D01G087600 chr5A 96.612 1771 47 3 4138 5905 86662068 86663828 0.000000e+00 2926
4 TraesCS5D01G087600 chr5A 94.270 733 34 5 850 1582 86658803 86659527 0.000000e+00 1114
5 TraesCS5D01G087600 chr5A 95.914 514 4 3 267 772 86657767 86658271 0.000000e+00 817
6 TraesCS5D01G087600 chr5A 92.899 169 12 0 1710 1878 387923965 387924133 4.570000e-61 246
7 TraesCS5D01G087600 chr5A 94.737 76 4 0 1916 1991 86659840 86659915 1.040000e-22 119
8 TraesCS5D01G087600 chr5A 83.582 134 8 3 1581 1707 86659651 86659777 4.840000e-21 113
9 TraesCS5D01G087600 chr5B 96.761 1667 44 10 2026 3688 98661115 98662775 0.000000e+00 2771
10 TraesCS5D01G087600 chr5B 95.294 1445 50 7 262 1706 98659544 98660970 0.000000e+00 2276
11 TraesCS5D01G087600 chr5B 92.111 1293 43 20 4139 5404 98663228 98664488 0.000000e+00 1768
12 TraesCS5D01G087600 chr5B 96.852 413 10 3 3726 4138 98662778 98663187 0.000000e+00 688
13 TraesCS5D01G087600 chr5B 96.012 326 13 0 5580 5905 98664930 98665255 1.130000e-146 531
14 TraesCS5D01G087600 chr5B 94.495 109 5 1 4139 4246 208523349 208523457 3.660000e-37 167
15 TraesCS5D01G087600 chr5B 91.250 80 7 0 5444 5523 98664752 98664831 6.260000e-20 110
16 TraesCS5D01G087600 chr5B 92.105 76 6 0 1916 1991 98661034 98661109 2.250000e-19 108
17 TraesCS5D01G087600 chr4D 94.286 210 12 0 1 210 360461542 360461333 7.380000e-84 322
18 TraesCS5D01G087600 chr3D 94.258 209 12 0 1 209 548395351 548395559 2.660000e-83 320
19 TraesCS5D01G087600 chr3D 94.083 169 10 0 1712 1880 71517845 71517677 2.110000e-64 257
20 TraesCS5D01G087600 chr3D 92.529 174 12 1 1706 1878 426452033 426451860 1.270000e-61 248
21 TraesCS5D01G087600 chr7D 93.839 211 13 0 1 211 10011860 10012070 9.550000e-83 318
22 TraesCS5D01G087600 chr7D 93.780 209 13 0 1 209 232935061 232935269 1.240000e-81 315
23 TraesCS5D01G087600 chr2D 93.839 211 13 0 1 211 391827009 391826799 9.550000e-83 318
24 TraesCS5D01G087600 chr2D 93.056 216 14 1 1 216 467251699 467251913 1.240000e-81 315
25 TraesCS5D01G087600 chr7A 93.088 217 13 2 1 216 16067519 16067304 3.430000e-82 316
26 TraesCS5D01G087600 chr7A 97.115 104 2 1 4139 4241 201987052 201987155 2.190000e-39 174
27 TraesCS5D01G087600 chr7A 97.087 103 3 0 4139 4241 206959961 206959859 2.190000e-39 174
28 TraesCS5D01G087600 chr6A 92.593 216 15 1 1 216 583381394 583381180 5.750000e-80 309
29 TraesCS5D01G087600 chr3A 94.578 166 9 0 1713 1878 34532615 34532450 2.110000e-64 257
30 TraesCS5D01G087600 chr3A 93.413 167 11 0 1712 1878 83748188 83748022 1.270000e-61 248
31 TraesCS5D01G087600 chr3A 92.982 114 7 1 4139 4251 589797318 589797431 1.320000e-36 165
32 TraesCS5D01G087600 chr6D 92.614 176 13 0 1703 1878 304099276 304099451 2.730000e-63 254
33 TraesCS5D01G087600 chr3B 93.976 166 10 0 1713 1878 42630984 42630819 9.820000e-63 252
34 TraesCS5D01G087600 chr3B 92.899 169 11 1 1712 1880 117589431 117589264 1.640000e-60 244
35 TraesCS5D01G087600 chr6B 91.477 176 15 0 1703 1878 469774161 469774336 5.910000e-60 243
36 TraesCS5D01G087600 chr6B 89.764 127 9 4 4139 4265 617176684 617176562 6.130000e-35 159
37 TraesCS5D01G087600 chr7B 97.087 103 3 0 4139 4241 155471217 155471319 2.190000e-39 174
38 TraesCS5D01G087600 chr1B 87.879 132 12 4 4139 4270 632021028 632020901 1.020000e-32 152


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G087600 chr5D 93060386 93066290 5904 False 10905.000000 10905 100.000000 1 5905 1 chr5D.!!$F1 5904
1 TraesCS5D01G087600 chr5A 86657767 86663828 6061 False 1431.833333 3502 93.619333 267 5905 6 chr5A.!!$F2 5638
2 TraesCS5D01G087600 chr5B 98659544 98665255 5711 False 1178.857143 2771 94.340714 262 5905 7 chr5B.!!$F2 5643

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
85 86 0.171007 ATGTTTGCGCTCGAAATGGG 59.829 50.000 9.73 0.00 0.00 4.00 F
214 215 0.400594 GGTGGAGTTGGCCTTACAGT 59.599 55.000 3.32 0.00 0.00 3.55 F
1775 2370 0.037232 CAAGAGGTCCTGGGTTCGAC 60.037 60.000 0.00 0.00 0.00 4.20 F
1800 2395 0.168348 CTCTCTGCATTGCACTGTGC 59.832 55.000 25.15 25.15 45.29 4.57 F
1859 2454 0.396435 CACCTGGTGTGGTAGCTTCA 59.604 55.000 18.76 0.00 41.52 3.02 F
1873 2468 0.398318 GCTTCAAGGACTGGGTCTGT 59.602 55.000 0.00 0.00 32.47 3.41 F
2269 2883 1.135721 ACGTACTTCCGCCCTCATTAC 59.864 52.381 0.00 0.00 0.00 1.89 F
4086 4704 1.457346 CTGCATGGAGGAAGACAACC 58.543 55.000 6.28 0.00 0.00 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1756 2351 0.037232 GTCGAACCCAGGACCTCTTG 60.037 60.000 0.00 0.00 0.00 3.02 R
2019 2633 0.119155 AGTGTTCCTCTGGGATGGGA 59.881 55.000 0.00 0.00 41.87 4.37 R
3724 4342 3.198409 CAGCTATGCACCACCATAGAA 57.802 47.619 12.06 0.00 44.73 2.10 R
3741 4359 5.659048 AGAAGCATTAATAAGTACGCAGC 57.341 39.130 0.00 0.00 0.00 5.25 R
3999 4617 2.665165 TCAAAGTTGGTGGCAATGAGT 58.335 42.857 0.00 0.00 0.00 3.41 R
4041 4659 6.549433 AGGTCAAAAATGTTCATGCCATAT 57.451 33.333 0.00 0.00 0.00 1.78 R
4406 5066 7.453393 TCTCCAAATATTTGAGAAGTCAGTGT 58.547 34.615 26.32 0.00 40.55 3.55 R
5405 6090 0.039798 GGTGCTGTCACATGCAAGTG 60.040 55.000 15.79 15.79 44.87 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 4.072088 GAGGCGCGTGTCCGTTTG 62.072 66.667 7.63 0.00 36.15 2.93
41 42 4.659874 GCGCGTGTCCGTTTGGTG 62.660 66.667 8.43 0.00 36.30 4.17
42 43 3.266376 CGCGTGTCCGTTTGGTGT 61.266 61.111 0.00 0.00 36.30 4.16
43 44 2.629763 GCGTGTCCGTTTGGTGTC 59.370 61.111 0.00 0.00 36.30 3.67
44 45 2.888998 GCGTGTCCGTTTGGTGTCC 61.889 63.158 0.00 0.00 36.30 4.02
45 46 2.591311 CGTGTCCGTTTGGTGTCCG 61.591 63.158 0.00 0.00 36.30 4.79
46 47 2.589442 TGTCCGTTTGGTGTCCGC 60.589 61.111 0.00 0.00 36.30 5.54
47 48 3.351416 GTCCGTTTGGTGTCCGCC 61.351 66.667 0.00 0.00 36.30 6.13
48 49 4.973055 TCCGTTTGGTGTCCGCCG 62.973 66.667 0.00 0.00 36.30 6.46
66 67 4.939368 CGACCCAAACCCGGTGCA 62.939 66.667 0.00 0.00 32.27 4.57
67 68 2.282887 GACCCAAACCCGGTGCAT 60.283 61.111 0.00 0.00 32.27 3.96
68 69 2.600173 ACCCAAACCCGGTGCATG 60.600 61.111 0.00 0.00 30.39 4.06
69 70 2.600173 CCCAAACCCGGTGCATGT 60.600 61.111 0.00 0.00 0.00 3.21
70 71 2.206536 CCCAAACCCGGTGCATGTT 61.207 57.895 0.00 0.00 0.00 2.71
71 72 1.745264 CCAAACCCGGTGCATGTTT 59.255 52.632 0.00 0.00 32.70 2.83
72 73 0.599728 CCAAACCCGGTGCATGTTTG 60.600 55.000 20.15 20.15 45.18 2.93
81 82 4.531708 GCATGTTTGCGCTCGAAA 57.468 50.000 9.73 0.00 39.49 3.46
82 83 3.020102 GCATGTTTGCGCTCGAAAT 57.980 47.368 9.73 0.00 39.49 2.17
83 84 0.636733 GCATGTTTGCGCTCGAAATG 59.363 50.000 9.73 6.50 39.49 2.32
84 85 1.261989 CATGTTTGCGCTCGAAATGG 58.738 50.000 9.73 0.00 0.00 3.16
85 86 0.171007 ATGTTTGCGCTCGAAATGGG 59.829 50.000 9.73 0.00 0.00 4.00
86 87 1.169661 TGTTTGCGCTCGAAATGGGT 61.170 50.000 9.73 0.00 0.00 4.51
87 88 0.454452 GTTTGCGCTCGAAATGGGTC 60.454 55.000 9.73 0.00 0.00 4.46
88 89 1.906994 TTTGCGCTCGAAATGGGTCG 61.907 55.000 9.73 0.00 42.48 4.79
89 90 3.564027 GCGCTCGAAATGGGTCGG 61.564 66.667 0.00 0.00 41.43 4.79
90 91 3.564027 CGCTCGAAATGGGTCGGC 61.564 66.667 0.00 0.00 41.43 5.54
91 92 3.202706 GCTCGAAATGGGTCGGCC 61.203 66.667 0.00 0.00 41.43 6.13
101 102 4.629523 GGTCGGCCCGGACACAAA 62.630 66.667 0.73 0.00 38.70 2.83
102 103 2.592287 GTCGGCCCGGACACAAAA 60.592 61.111 0.73 0.00 36.91 2.44
103 104 2.592287 TCGGCCCGGACACAAAAC 60.592 61.111 0.73 0.00 0.00 2.43
104 105 4.020378 CGGCCCGGACACAAAACG 62.020 66.667 0.73 0.00 0.00 3.60
105 106 3.666253 GGCCCGGACACAAAACGG 61.666 66.667 0.73 0.00 46.79 4.44
109 110 4.128139 CGGACACAAAACGGACCA 57.872 55.556 0.00 0.00 0.00 4.02
110 111 1.938861 CGGACACAAAACGGACCAG 59.061 57.895 0.00 0.00 0.00 4.00
111 112 0.531090 CGGACACAAAACGGACCAGA 60.531 55.000 0.00 0.00 0.00 3.86
112 113 1.876416 CGGACACAAAACGGACCAGAT 60.876 52.381 0.00 0.00 0.00 2.90
113 114 1.535462 GGACACAAAACGGACCAGATG 59.465 52.381 0.00 0.00 0.00 2.90
114 115 2.489971 GACACAAAACGGACCAGATGA 58.510 47.619 0.00 0.00 0.00 2.92
115 116 2.480419 GACACAAAACGGACCAGATGAG 59.520 50.000 0.00 0.00 0.00 2.90
116 117 2.158813 ACACAAAACGGACCAGATGAGT 60.159 45.455 0.00 0.00 0.00 3.41
117 118 2.480419 CACAAAACGGACCAGATGAGTC 59.520 50.000 0.00 0.00 0.00 3.36
121 122 3.221222 GGACCAGATGAGTCCGGG 58.779 66.667 0.00 0.00 44.16 5.73
122 123 2.501610 GACCAGATGAGTCCGGGC 59.498 66.667 0.00 0.00 0.00 6.13
123 124 3.083997 ACCAGATGAGTCCGGGCC 61.084 66.667 0.08 0.00 0.00 5.80
124 125 4.227134 CCAGATGAGTCCGGGCCG 62.227 72.222 21.46 21.46 0.00 6.13
125 126 3.461773 CAGATGAGTCCGGGCCGT 61.462 66.667 26.32 6.13 0.00 5.68
126 127 3.148279 AGATGAGTCCGGGCCGTC 61.148 66.667 26.32 16.59 0.00 4.79
127 128 4.570663 GATGAGTCCGGGCCGTCG 62.571 72.222 26.32 10.85 0.00 5.12
154 155 2.663852 CCGCCTCGTTTGTCCGTT 60.664 61.111 0.00 0.00 0.00 4.44
155 156 2.248835 CCGCCTCGTTTGTCCGTTT 61.249 57.895 0.00 0.00 0.00 3.60
156 157 1.644913 CGCCTCGTTTGTCCGTTTT 59.355 52.632 0.00 0.00 0.00 2.43
157 158 0.860533 CGCCTCGTTTGTCCGTTTTA 59.139 50.000 0.00 0.00 0.00 1.52
158 159 1.397567 CGCCTCGTTTGTCCGTTTTAC 60.398 52.381 0.00 0.00 0.00 2.01
159 160 1.069703 GCCTCGTTTGTCCGTTTTACC 60.070 52.381 0.00 0.00 0.00 2.85
160 161 1.532437 CCTCGTTTGTCCGTTTTACCC 59.468 52.381 0.00 0.00 0.00 3.69
161 162 1.532437 CTCGTTTGTCCGTTTTACCCC 59.468 52.381 0.00 0.00 0.00 4.95
162 163 1.134280 TCGTTTGTCCGTTTTACCCCA 60.134 47.619 0.00 0.00 0.00 4.96
163 164 1.674962 CGTTTGTCCGTTTTACCCCAA 59.325 47.619 0.00 0.00 0.00 4.12
164 165 2.098770 CGTTTGTCCGTTTTACCCCAAA 59.901 45.455 0.00 0.00 0.00 3.28
165 166 3.446799 GTTTGTCCGTTTTACCCCAAAC 58.553 45.455 0.00 0.00 36.16 2.93
166 167 2.431954 TGTCCGTTTTACCCCAAACA 57.568 45.000 0.00 0.00 36.58 2.83
167 168 2.731572 TGTCCGTTTTACCCCAAACAA 58.268 42.857 0.00 0.00 36.58 2.83
168 169 3.094572 TGTCCGTTTTACCCCAAACAAA 58.905 40.909 0.00 0.00 36.58 2.83
169 170 3.119209 TGTCCGTTTTACCCCAAACAAAC 60.119 43.478 0.00 0.00 36.58 2.93
171 172 2.461903 CGTTTTACCCCAAACAAACGG 58.538 47.619 7.89 0.00 44.87 4.44
172 173 2.798853 CGTTTTACCCCAAACAAACGGG 60.799 50.000 7.89 0.00 44.87 5.28
176 177 3.984749 CCCAAACAAACGGGGCCG 61.985 66.667 0.00 0.00 46.03 6.13
177 178 3.984749 CCAAACAAACGGGGCCGG 61.985 66.667 9.88 9.88 44.69 6.13
178 179 2.907917 CAAACAAACGGGGCCGGA 60.908 61.111 18.95 0.00 44.69 5.14
179 180 2.908428 AAACAAACGGGGCCGGAC 60.908 61.111 18.95 0.00 44.69 4.79
180 181 3.717924 AAACAAACGGGGCCGGACA 62.718 57.895 18.95 0.00 44.69 4.02
181 182 4.636435 ACAAACGGGGCCGGACAG 62.636 66.667 18.95 4.67 44.69 3.51
190 191 4.176752 GCCGGACAGGATGGGGTC 62.177 72.222 5.05 0.00 45.00 4.46
191 192 3.849951 CCGGACAGGATGGGGTCG 61.850 72.222 0.00 0.00 45.00 4.79
192 193 4.530857 CGGACAGGATGGGGTCGC 62.531 72.222 0.00 0.00 43.62 5.19
193 194 4.530857 GGACAGGATGGGGTCGCG 62.531 72.222 0.00 0.00 43.62 5.87
210 211 2.349755 GCGGTGGAGTTGGCCTTA 59.650 61.111 3.32 0.00 0.00 2.69
211 212 2.038837 GCGGTGGAGTTGGCCTTAC 61.039 63.158 3.32 1.81 0.00 2.34
212 213 1.373435 CGGTGGAGTTGGCCTTACA 59.627 57.895 3.32 0.00 0.00 2.41
213 214 0.673644 CGGTGGAGTTGGCCTTACAG 60.674 60.000 3.32 0.00 0.00 2.74
214 215 0.400594 GGTGGAGTTGGCCTTACAGT 59.599 55.000 3.32 0.00 0.00 3.55
215 216 1.202891 GGTGGAGTTGGCCTTACAGTT 60.203 52.381 3.32 0.00 0.00 3.16
216 217 2.152016 GTGGAGTTGGCCTTACAGTTC 58.848 52.381 3.32 0.00 0.00 3.01
217 218 1.771854 TGGAGTTGGCCTTACAGTTCA 59.228 47.619 3.32 0.00 0.00 3.18
218 219 2.173782 TGGAGTTGGCCTTACAGTTCAA 59.826 45.455 3.32 0.00 0.00 2.69
219 220 2.552743 GGAGTTGGCCTTACAGTTCAAC 59.447 50.000 3.32 0.00 38.26 3.18
220 221 3.211045 GAGTTGGCCTTACAGTTCAACA 58.789 45.455 3.32 0.00 39.84 3.33
221 222 3.821033 GAGTTGGCCTTACAGTTCAACAT 59.179 43.478 3.32 0.00 39.84 2.71
222 223 4.215109 AGTTGGCCTTACAGTTCAACATT 58.785 39.130 3.32 0.00 39.84 2.71
223 224 4.649218 AGTTGGCCTTACAGTTCAACATTT 59.351 37.500 3.32 0.00 39.84 2.32
224 225 5.128663 AGTTGGCCTTACAGTTCAACATTTT 59.871 36.000 3.32 0.00 39.84 1.82
225 226 4.942852 TGGCCTTACAGTTCAACATTTTG 58.057 39.130 3.32 0.00 0.00 2.44
226 227 4.404073 TGGCCTTACAGTTCAACATTTTGT 59.596 37.500 3.32 0.00 34.02 2.83
227 228 5.105146 TGGCCTTACAGTTCAACATTTTGTT 60.105 36.000 3.32 0.00 42.08 2.83
228 229 5.815222 GGCCTTACAGTTCAACATTTTGTTT 59.185 36.000 0.00 0.00 38.77 2.83
229 230 6.019075 GGCCTTACAGTTCAACATTTTGTTTC 60.019 38.462 0.00 0.00 38.77 2.78
230 231 6.533367 GCCTTACAGTTCAACATTTTGTTTCA 59.467 34.615 0.00 0.00 38.77 2.69
231 232 7.224557 GCCTTACAGTTCAACATTTTGTTTCAT 59.775 33.333 0.00 0.00 38.77 2.57
232 233 9.743057 CCTTACAGTTCAACATTTTGTTTCATA 57.257 29.630 0.00 0.00 38.77 2.15
253 254 7.975750 TCATATATGAAAGAGATACGACGAGG 58.024 38.462 13.12 0.00 33.08 4.63
254 255 7.822822 TCATATATGAAAGAGATACGACGAGGA 59.177 37.037 13.12 0.00 33.08 3.71
255 256 8.616942 CATATATGAAAGAGATACGACGAGGAT 58.383 37.037 6.92 0.00 0.00 3.24
256 257 4.553756 TGAAAGAGATACGACGAGGATG 57.446 45.455 0.00 0.00 0.00 3.51
257 258 4.196971 TGAAAGAGATACGACGAGGATGA 58.803 43.478 0.00 0.00 0.00 2.92
258 259 4.822350 TGAAAGAGATACGACGAGGATGAT 59.178 41.667 0.00 0.00 0.00 2.45
259 260 4.757799 AAGAGATACGACGAGGATGATG 57.242 45.455 0.00 0.00 0.00 3.07
260 261 3.745799 AGAGATACGACGAGGATGATGT 58.254 45.455 0.00 0.00 0.00 3.06
458 459 3.820557 TCCCAACAACAAGAAGAAGAGG 58.179 45.455 0.00 0.00 0.00 3.69
619 628 1.617947 AATCTCGAGCTCACCCACCC 61.618 60.000 15.40 0.00 0.00 4.61
620 629 2.805313 ATCTCGAGCTCACCCACCCA 62.805 60.000 15.40 0.00 0.00 4.51
621 630 3.302347 CTCGAGCTCACCCACCCAC 62.302 68.421 15.40 0.00 0.00 4.61
622 631 4.394712 CGAGCTCACCCACCCACC 62.395 72.222 15.40 0.00 0.00 4.61
623 632 3.249189 GAGCTCACCCACCCACCA 61.249 66.667 9.40 0.00 0.00 4.17
624 633 2.776526 AGCTCACCCACCCACCAA 60.777 61.111 0.00 0.00 0.00 3.67
799 808 2.666526 GGGGATCGATCGCTTGGC 60.667 66.667 33.14 18.23 39.44 4.52
951 1414 0.531532 CCGATGCTCGCTGGATTCTT 60.532 55.000 0.72 0.00 38.82 2.52
1170 1633 3.512680 CTTCGTCTTTATTCTCACCGCT 58.487 45.455 0.00 0.00 0.00 5.52
1250 1713 2.463589 TAGCCTCCCCGTTTGTGCTG 62.464 60.000 0.00 0.00 0.00 4.41
1324 1787 9.778741 TTAGAGTTTAGACAATATAATGGCTGG 57.221 33.333 6.40 0.00 39.59 4.85
1334 1797 6.042322 ACAATATAATGGCTGGCAAATGATGT 59.958 34.615 8.35 11.02 0.00 3.06
1341 1804 2.933492 GCTGGCAAATGATGTGCAATGT 60.933 45.455 10.16 0.00 44.07 2.71
1364 1827 1.956477 GTGTGGGATGTGACTTTTGCT 59.044 47.619 0.00 0.00 0.00 3.91
1372 1835 4.084223 GGATGTGACTTTTGCTGCAATTTG 60.084 41.667 16.77 11.36 0.00 2.32
1374 1837 2.545106 GTGACTTTTGCTGCAATTTGGG 59.455 45.455 16.77 7.34 0.00 4.12
1389 1852 5.237048 CAATTTGGGTGGTGAATAACTTGG 58.763 41.667 0.00 0.00 0.00 3.61
1408 1871 4.666412 TGGATGGGTTTGACCTAAATCA 57.334 40.909 0.00 0.00 38.64 2.57
1435 1898 9.070257 ATGGTACATTGTTATCTGCATCTGCAC 62.070 40.741 0.00 0.00 45.99 4.57
1451 1914 4.827692 TCTGCACTGGTCGTTAATAACAT 58.172 39.130 3.91 0.00 0.00 2.71
1454 1917 4.629634 TGCACTGGTCGTTAATAACATGAG 59.370 41.667 0.00 0.00 0.00 2.90
1459 1922 7.117812 CACTGGTCGTTAATAACATGAGTTTCT 59.882 37.037 0.00 0.00 39.15 2.52
1474 1937 8.589338 ACATGAGTTTCTGTTACTTCAGTCTAT 58.411 33.333 0.00 0.00 36.85 1.98
1479 1942 7.233757 AGTTTCTGTTACTTCAGTCTATGGTCT 59.766 37.037 0.00 0.00 36.85 3.85
1536 1999 6.046290 AGTAAGGCTGATTAACCGTTTACT 57.954 37.500 0.00 0.00 0.00 2.24
1537 2000 6.470278 AGTAAGGCTGATTAACCGTTTACTT 58.530 36.000 0.00 0.00 0.00 2.24
1557 2020 1.446907 AGTTTCATTGAGCTGCGGAG 58.553 50.000 0.00 0.00 0.00 4.63
1568 2031 0.530870 GCTGCGGAGACCACCTATTC 60.531 60.000 8.65 0.00 0.00 1.75
1593 2181 8.604184 TCGGTCTCCTGTATAGAAGATAAGTAT 58.396 37.037 0.00 0.00 0.00 2.12
1639 2234 7.631717 AGCTTAAAGTGTTTCTTTCTTCACT 57.368 32.000 0.00 0.00 44.18 3.41
1645 2240 7.687941 AAGTGTTTCTTTCTTCACTTTGAGA 57.312 32.000 0.00 0.00 45.01 3.27
1646 2241 7.687941 AGTGTTTCTTTCTTCACTTTGAGAA 57.312 32.000 0.00 0.00 37.81 2.87
1647 2242 8.286191 AGTGTTTCTTTCTTCACTTTGAGAAT 57.714 30.769 0.00 0.00 37.81 2.40
1648 2243 8.186821 AGTGTTTCTTTCTTCACTTTGAGAATG 58.813 33.333 0.00 0.00 37.81 2.67
1649 2244 7.970614 GTGTTTCTTTCTTCACTTTGAGAATGT 59.029 33.333 0.00 0.00 0.00 2.71
1680 2275 7.275888 TGTTCAGTGAGAAATTAGTTGCATT 57.724 32.000 0.00 0.00 38.13 3.56
1702 2297 5.803020 TTTTTGTTTAAAGCCGCAAACAT 57.197 30.435 7.97 0.00 42.48 2.71
1707 2302 4.034510 TGTTTAAAGCCGCAAACATTTTGG 59.965 37.500 3.95 0.00 39.16 3.28
1708 2303 1.592064 AAAGCCGCAAACATTTTGGG 58.408 45.000 8.35 8.35 0.00 4.12
1709 2304 0.467804 AAGCCGCAAACATTTTGGGT 59.532 45.000 12.90 2.91 0.00 4.51
1712 2307 1.671556 GCCGCAAACATTTTGGGTAGG 60.672 52.381 12.90 2.00 0.00 3.18
1713 2308 1.889829 CCGCAAACATTTTGGGTAGGA 59.110 47.619 12.90 0.00 0.00 2.94
1714 2309 2.297597 CCGCAAACATTTTGGGTAGGAA 59.702 45.455 12.90 0.00 0.00 3.36
1715 2310 3.574614 CGCAAACATTTTGGGTAGGAAG 58.425 45.455 7.37 0.00 0.00 3.46
1716 2311 3.613910 CGCAAACATTTTGGGTAGGAAGG 60.614 47.826 7.37 0.00 0.00 3.46
1717 2312 3.576550 GCAAACATTTTGGGTAGGAAGGA 59.423 43.478 1.07 0.00 0.00 3.36
1718 2313 4.560716 GCAAACATTTTGGGTAGGAAGGAC 60.561 45.833 1.07 0.00 0.00 3.85
1719 2314 4.463050 AACATTTTGGGTAGGAAGGACA 57.537 40.909 0.00 0.00 0.00 4.02
1720 2315 4.034285 ACATTTTGGGTAGGAAGGACAG 57.966 45.455 0.00 0.00 0.00 3.51
1721 2316 3.245264 ACATTTTGGGTAGGAAGGACAGG 60.245 47.826 0.00 0.00 0.00 4.00
1722 2317 0.696501 TTTGGGTAGGAAGGACAGGC 59.303 55.000 0.00 0.00 0.00 4.85
1723 2318 1.205460 TTGGGTAGGAAGGACAGGCC 61.205 60.000 0.00 0.00 0.00 5.19
1760 2355 2.520458 CCCCCACTTGTGCCAAGA 59.480 61.111 18.22 0.00 0.00 3.02
1761 2356 1.604593 CCCCCACTTGTGCCAAGAG 60.605 63.158 18.22 11.85 0.00 2.85
1762 2357 1.604593 CCCCACTTGTGCCAAGAGG 60.605 63.158 18.22 18.17 38.23 3.69
1763 2358 1.151450 CCCACTTGTGCCAAGAGGT 59.849 57.895 21.11 2.99 37.19 3.85
1764 2359 0.890996 CCCACTTGTGCCAAGAGGTC 60.891 60.000 21.11 0.00 37.19 3.85
1765 2360 0.890996 CCACTTGTGCCAAGAGGTCC 60.891 60.000 18.22 0.00 37.19 4.46
1766 2361 0.109342 CACTTGTGCCAAGAGGTCCT 59.891 55.000 18.22 0.00 37.19 3.85
1767 2362 0.109342 ACTTGTGCCAAGAGGTCCTG 59.891 55.000 18.22 0.00 37.19 3.86
1768 2363 0.607489 CTTGTGCCAAGAGGTCCTGG 60.607 60.000 0.00 0.00 37.19 4.45
1769 2364 2.067932 TTGTGCCAAGAGGTCCTGGG 62.068 60.000 0.00 0.00 39.14 4.45
1770 2365 2.121963 TGCCAAGAGGTCCTGGGT 60.122 61.111 0.00 0.00 38.32 4.51
1771 2366 1.774217 TGCCAAGAGGTCCTGGGTT 60.774 57.895 0.00 0.00 38.32 4.11
1772 2367 1.002011 GCCAAGAGGTCCTGGGTTC 60.002 63.158 0.00 0.00 38.32 3.62
1773 2368 1.296715 CCAAGAGGTCCTGGGTTCG 59.703 63.158 0.00 0.00 30.82 3.95
1774 2369 1.192146 CCAAGAGGTCCTGGGTTCGA 61.192 60.000 0.00 0.00 30.82 3.71
1775 2370 0.037232 CAAGAGGTCCTGGGTTCGAC 60.037 60.000 0.00 0.00 0.00 4.20
1776 2371 1.533469 AAGAGGTCCTGGGTTCGACG 61.533 60.000 0.00 0.00 0.00 5.12
1777 2372 3.644399 GAGGTCCTGGGTTCGACGC 62.644 68.421 0.00 0.00 0.00 5.19
1778 2373 3.998672 GGTCCTGGGTTCGACGCA 61.999 66.667 0.00 0.00 38.80 5.24
1783 2378 4.373116 TGGGTTCGACGCAGCCTC 62.373 66.667 16.39 1.79 36.06 4.70
1784 2379 4.070552 GGGTTCGACGCAGCCTCT 62.071 66.667 8.52 0.00 0.00 3.69
1785 2380 2.507324 GGTTCGACGCAGCCTCTC 60.507 66.667 0.00 0.00 0.00 3.20
1786 2381 2.569134 GTTCGACGCAGCCTCTCT 59.431 61.111 0.00 0.00 0.00 3.10
1787 2382 1.803519 GTTCGACGCAGCCTCTCTG 60.804 63.158 0.00 0.00 45.62 3.35
1794 2389 4.313819 CAGCCTCTCTGCATTGCA 57.686 55.556 11.50 11.50 35.78 4.08
1795 2390 1.801332 CAGCCTCTCTGCATTGCAC 59.199 57.895 7.38 0.00 35.78 4.57
1796 2391 0.677098 CAGCCTCTCTGCATTGCACT 60.677 55.000 7.38 0.00 35.78 4.40
1797 2392 0.677098 AGCCTCTCTGCATTGCACTG 60.677 55.000 7.38 0.00 33.79 3.66
1798 2393 0.959372 GCCTCTCTGCATTGCACTGT 60.959 55.000 7.38 0.00 33.79 3.55
1799 2394 0.803117 CCTCTCTGCATTGCACTGTG 59.197 55.000 7.38 2.76 33.79 3.66
1800 2395 0.168348 CTCTCTGCATTGCACTGTGC 59.832 55.000 25.15 25.15 45.29 4.57
1809 2404 3.987404 GCACTGTGCAGGGGTAAG 58.013 61.111 26.70 0.00 44.26 2.34
1810 2405 1.675641 GCACTGTGCAGGGGTAAGG 60.676 63.158 26.70 0.00 44.26 2.69
1811 2406 1.675641 CACTGTGCAGGGGTAAGGC 60.676 63.158 4.11 0.00 0.00 4.35
1812 2407 1.847968 ACTGTGCAGGGGTAAGGCT 60.848 57.895 4.11 0.00 0.00 4.58
1813 2408 1.380302 CTGTGCAGGGGTAAGGCTT 59.620 57.895 4.58 4.58 0.00 4.35
1814 2409 0.962356 CTGTGCAGGGGTAAGGCTTG 60.962 60.000 10.69 0.00 0.00 4.01
1815 2410 2.035626 TGCAGGGGTAAGGCTTGC 59.964 61.111 10.69 8.66 35.42 4.01
1816 2411 2.755876 GCAGGGGTAAGGCTTGCC 60.756 66.667 24.36 24.36 34.30 4.52
1817 2412 3.090765 CAGGGGTAAGGCTTGCCT 58.909 61.111 29.53 11.87 35.54 4.75
1818 2413 1.077429 CAGGGGTAAGGCTTGCCTC 60.077 63.158 29.53 27.43 35.94 4.70
1819 2414 2.124695 GGGGTAAGGCTTGCCTCG 60.125 66.667 29.53 0.00 35.54 4.63
1820 2415 2.669240 GGGTAAGGCTTGCCTCGT 59.331 61.111 29.53 2.79 35.54 4.18
1821 2416 1.619807 GGGGTAAGGCTTGCCTCGTA 61.620 60.000 29.53 1.75 35.54 3.43
1822 2417 0.468648 GGGTAAGGCTTGCCTCGTAT 59.531 55.000 29.53 1.65 35.54 3.06
1823 2418 1.690352 GGGTAAGGCTTGCCTCGTATA 59.310 52.381 29.53 0.63 35.54 1.47
1824 2419 2.103601 GGGTAAGGCTTGCCTCGTATAA 59.896 50.000 29.53 0.00 35.54 0.98
1825 2420 3.244457 GGGTAAGGCTTGCCTCGTATAAT 60.244 47.826 29.53 0.00 35.54 1.28
1826 2421 3.995048 GGTAAGGCTTGCCTCGTATAATC 59.005 47.826 24.97 0.00 32.08 1.75
1827 2422 2.841442 AGGCTTGCCTCGTATAATCC 57.159 50.000 8.56 0.00 0.00 3.01
1828 2423 2.330216 AGGCTTGCCTCGTATAATCCT 58.670 47.619 8.56 0.00 0.00 3.24
1829 2424 2.706190 AGGCTTGCCTCGTATAATCCTT 59.294 45.455 8.56 0.00 0.00 3.36
1830 2425 3.067833 GGCTTGCCTCGTATAATCCTTC 58.932 50.000 4.11 0.00 0.00 3.46
1831 2426 3.067833 GCTTGCCTCGTATAATCCTTCC 58.932 50.000 0.00 0.00 0.00 3.46
1832 2427 3.665190 CTTGCCTCGTATAATCCTTCCC 58.335 50.000 0.00 0.00 0.00 3.97
1833 2428 1.975680 TGCCTCGTATAATCCTTCCCC 59.024 52.381 0.00 0.00 0.00 4.81
1834 2429 1.975680 GCCTCGTATAATCCTTCCCCA 59.024 52.381 0.00 0.00 0.00 4.96
1835 2430 2.028020 GCCTCGTATAATCCTTCCCCAG 60.028 54.545 0.00 0.00 0.00 4.45
1836 2431 3.507411 CCTCGTATAATCCTTCCCCAGA 58.493 50.000 0.00 0.00 0.00 3.86
1837 2432 3.258622 CCTCGTATAATCCTTCCCCAGAC 59.741 52.174 0.00 0.00 0.00 3.51
1838 2433 3.236896 TCGTATAATCCTTCCCCAGACC 58.763 50.000 0.00 0.00 0.00 3.85
1839 2434 2.302157 CGTATAATCCTTCCCCAGACCC 59.698 54.545 0.00 0.00 0.00 4.46
1840 2435 1.834540 ATAATCCTTCCCCAGACCCC 58.165 55.000 0.00 0.00 0.00 4.95
1841 2436 0.423956 TAATCCTTCCCCAGACCCCA 59.576 55.000 0.00 0.00 0.00 4.96
1842 2437 1.214992 AATCCTTCCCCAGACCCCAC 61.215 60.000 0.00 0.00 0.00 4.61
1843 2438 3.339093 CCTTCCCCAGACCCCACC 61.339 72.222 0.00 0.00 0.00 4.61
1844 2439 2.204151 CTTCCCCAGACCCCACCT 60.204 66.667 0.00 0.00 0.00 4.00
1845 2440 2.531685 TTCCCCAGACCCCACCTG 60.532 66.667 0.00 0.00 0.00 4.00
1849 2444 2.854032 CCAGACCCCACCTGGTGT 60.854 66.667 24.32 7.12 44.66 4.16
1850 2445 2.431683 CAGACCCCACCTGGTGTG 59.568 66.667 24.32 14.14 42.46 3.82
1858 2453 3.233355 CACCTGGTGTGGTAGCTTC 57.767 57.895 18.76 0.00 41.52 3.86
1859 2454 0.396435 CACCTGGTGTGGTAGCTTCA 59.604 55.000 18.76 0.00 41.52 3.02
1860 2455 1.136828 ACCTGGTGTGGTAGCTTCAA 58.863 50.000 0.00 0.00 38.79 2.69
1861 2456 1.072331 ACCTGGTGTGGTAGCTTCAAG 59.928 52.381 0.00 0.00 38.79 3.02
1862 2457 1.611673 CCTGGTGTGGTAGCTTCAAGG 60.612 57.143 0.00 0.00 0.00 3.61
1863 2458 1.347707 CTGGTGTGGTAGCTTCAAGGA 59.652 52.381 0.00 0.00 0.00 3.36
1864 2459 1.071699 TGGTGTGGTAGCTTCAAGGAC 59.928 52.381 0.00 0.00 0.00 3.85
1865 2460 1.348036 GGTGTGGTAGCTTCAAGGACT 59.652 52.381 0.00 0.00 0.00 3.85
1866 2461 2.417719 GTGTGGTAGCTTCAAGGACTG 58.582 52.381 0.00 0.00 0.00 3.51
1867 2462 1.347707 TGTGGTAGCTTCAAGGACTGG 59.652 52.381 0.00 0.00 0.00 4.00
1868 2463 0.984230 TGGTAGCTTCAAGGACTGGG 59.016 55.000 0.00 0.00 0.00 4.45
1869 2464 0.984995 GGTAGCTTCAAGGACTGGGT 59.015 55.000 0.00 0.00 0.00 4.51
1870 2465 1.066071 GGTAGCTTCAAGGACTGGGTC 60.066 57.143 0.00 0.00 0.00 4.46
1871 2466 1.903183 GTAGCTTCAAGGACTGGGTCT 59.097 52.381 0.00 0.00 32.47 3.85
1872 2467 0.689623 AGCTTCAAGGACTGGGTCTG 59.310 55.000 0.00 0.00 32.47 3.51
1873 2468 0.398318 GCTTCAAGGACTGGGTCTGT 59.602 55.000 0.00 0.00 32.47 3.41
1874 2469 1.609320 GCTTCAAGGACTGGGTCTGTC 60.609 57.143 0.00 0.00 32.47 3.51
1904 2499 7.061054 AGCCATGAATGATAGCTATATGCAAT 58.939 34.615 6.13 0.00 45.94 3.56
1905 2500 7.013369 AGCCATGAATGATAGCTATATGCAATG 59.987 37.037 6.13 8.39 45.94 2.82
1911 2506 5.982356 TGATAGCTATATGCAATGACCCTC 58.018 41.667 6.13 0.00 45.94 4.30
1938 2552 6.828502 TCGATATCTTGCACTGATGTTTAC 57.171 37.500 10.63 0.00 0.00 2.01
1940 2554 6.986231 TCGATATCTTGCACTGATGTTTACAT 59.014 34.615 10.63 0.00 39.70 2.29
1991 2605 8.808092 AGTTAGCTAAGTAGAACACTGAAATCT 58.192 33.333 12.25 0.00 37.63 2.40
1993 2607 7.897575 AGCTAAGTAGAACACTGAAATCTTG 57.102 36.000 0.00 0.00 37.63 3.02
1994 2608 7.445945 AGCTAAGTAGAACACTGAAATCTTGT 58.554 34.615 0.00 0.00 37.63 3.16
1995 2609 7.934120 AGCTAAGTAGAACACTGAAATCTTGTT 59.066 33.333 0.00 2.02 37.63 2.83
1996 2610 8.560374 GCTAAGTAGAACACTGAAATCTTGTTT 58.440 33.333 0.00 0.00 37.63 2.83
1998 2612 7.497925 AGTAGAACACTGAAATCTTGTTTCC 57.502 36.000 0.00 0.00 35.62 3.13
1999 2613 7.283329 AGTAGAACACTGAAATCTTGTTTCCT 58.717 34.615 0.00 0.00 35.62 3.36
2000 2614 6.382869 AGAACACTGAAATCTTGTTTCCTG 57.617 37.500 0.00 0.00 33.59 3.86
2001 2615 5.300286 AGAACACTGAAATCTTGTTTCCTGG 59.700 40.000 0.00 0.00 33.59 4.45
2002 2616 4.792068 ACACTGAAATCTTGTTTCCTGGA 58.208 39.130 0.00 0.00 0.00 3.86
2003 2617 5.200483 ACACTGAAATCTTGTTTCCTGGAA 58.800 37.500 4.68 4.68 0.00 3.53
2004 2618 5.067805 ACACTGAAATCTTGTTTCCTGGAAC 59.932 40.000 9.04 5.43 0.00 3.62
2005 2619 4.584743 ACTGAAATCTTGTTTCCTGGAACC 59.415 41.667 9.04 2.20 0.00 3.62
2006 2620 4.541705 TGAAATCTTGTTTCCTGGAACCA 58.458 39.130 9.04 5.45 0.00 3.67
2007 2621 5.147032 TGAAATCTTGTTTCCTGGAACCAT 58.853 37.500 9.04 0.00 0.00 3.55
2008 2622 6.310941 TGAAATCTTGTTTCCTGGAACCATA 58.689 36.000 9.04 0.35 0.00 2.74
2009 2623 6.434028 TGAAATCTTGTTTCCTGGAACCATAG 59.566 38.462 9.04 8.82 0.00 2.23
2010 2624 4.993705 TCTTGTTTCCTGGAACCATAGT 57.006 40.909 9.04 0.00 0.00 2.12
2011 2625 5.319043 TCTTGTTTCCTGGAACCATAGTT 57.681 39.130 9.04 0.00 39.54 2.24
2065 2679 6.294176 CCATCGTTTCTGAAAAATCAGGAGTT 60.294 38.462 4.09 0.00 38.23 3.01
2068 2682 4.749245 TTCTGAAAAATCAGGAGTTCGC 57.251 40.909 6.04 0.00 38.23 4.70
2069 2683 4.008074 TCTGAAAAATCAGGAGTTCGCT 57.992 40.909 6.04 0.00 38.23 4.93
2070 2684 3.997021 TCTGAAAAATCAGGAGTTCGCTC 59.003 43.478 6.04 0.00 43.36 5.03
2162 2776 6.672266 TGGCTTTGTATGTCCCATTTTAAA 57.328 33.333 0.00 0.00 0.00 1.52
2233 2847 3.720949 TTTACCATGATACCTCGACGG 57.279 47.619 0.00 0.03 39.35 4.79
2269 2883 1.135721 ACGTACTTCCGCCCTCATTAC 59.864 52.381 0.00 0.00 0.00 1.89
2286 2900 3.478857 TTACTTGGCCGTCTTCTCAAA 57.521 42.857 0.00 0.00 0.00 2.69
2320 2935 7.724305 TCTTCAATGCTTAAACTTTCTACGT 57.276 32.000 0.00 0.00 0.00 3.57
2576 3192 5.529060 GCTTGATGAAATAAACTCGGAGGAT 59.471 40.000 10.23 0.00 0.00 3.24
2578 3194 4.816385 TGATGAAATAAACTCGGAGGATGC 59.184 41.667 10.23 0.00 0.00 3.91
2772 3388 4.877823 TGATGCAATTAGTGATCAGTGACC 59.122 41.667 13.54 0.00 0.00 4.02
2806 3422 4.829492 CCTTTCATCCACTCCTCTTTGTTT 59.171 41.667 0.00 0.00 0.00 2.83
3141 3757 5.710646 AGCCTGAGAGGATAGTCTTTCATA 58.289 41.667 0.00 0.00 37.67 2.15
3275 3891 6.459573 CGAAAGAAAATGGTCCAGTTCTTGAA 60.460 38.462 24.15 0.00 0.00 2.69
3398 4014 4.040755 AGGCAGGAAGTCCAACATATACT 58.959 43.478 0.00 0.00 38.89 2.12
3678 4296 5.298026 GCTAGTTGGAAATTCTCATTCTCCC 59.702 44.000 0.00 0.00 0.00 4.30
3733 4351 9.442047 AAAACTGTAGAGAAGATTTCTATGGTG 57.558 33.333 0.00 0.00 40.87 4.17
3741 4359 6.294473 AGAAGATTTCTATGGTGGTGCATAG 58.706 40.000 0.00 0.00 38.49 2.23
3763 4381 5.360591 AGCTGCGTACTTATTAATGCTTCT 58.639 37.500 0.00 0.00 0.00 2.85
4086 4704 1.457346 CTGCATGGAGGAAGACAACC 58.543 55.000 6.28 0.00 0.00 3.77
4316 4976 8.738106 ACATTTCTTTTCTTTTTGCCATTTCAA 58.262 25.926 0.00 0.00 0.00 2.69
4388 5048 6.509418 TGACCATAAGTTTCTAATTGCACC 57.491 37.500 0.00 0.00 0.00 5.01
4439 5099 9.282247 CTTCTCAAATATTTGGAGATTTTGTCG 57.718 33.333 24.40 0.00 38.66 4.35
4521 5181 7.275888 TGTTTTCTGCTTCACATGATAGTTT 57.724 32.000 0.00 0.00 0.00 2.66
4592 5276 1.069358 GGGGAGCTCCAGTCTTATTCG 59.931 57.143 33.29 0.00 37.91 3.34
4597 5281 3.589988 AGCTCCAGTCTTATTCGTTGTG 58.410 45.455 0.00 0.00 0.00 3.33
4601 5285 5.407387 GCTCCAGTCTTATTCGTTGTGTTTA 59.593 40.000 0.00 0.00 0.00 2.01
4653 5338 0.884514 GCTTTGGAGGCTTGGAACTC 59.115 55.000 0.00 0.00 0.00 3.01
4697 5382 2.442236 AAGGCCATGTTCATCCGATT 57.558 45.000 5.01 0.00 0.00 3.34
4706 5391 3.392882 TGTTCATCCGATTGATCCATCG 58.607 45.455 19.46 19.46 39.75 3.84
4742 5427 2.940514 TGGGGTATCAGGAGAAGACA 57.059 50.000 0.00 0.00 0.00 3.41
4805 5490 3.571590 TGGACAAAGTAAACCATGGCTT 58.428 40.909 13.04 8.96 0.00 4.35
5311 5996 4.469657 ACATTTTGCACCCAGTCTTTCTA 58.530 39.130 0.00 0.00 0.00 2.10
5349 6034 8.186163 GTGATCATCTCAAATGAAATACTTGCA 58.814 33.333 0.00 0.00 35.07 4.08
5401 6086 6.992063 TCTGAGATTCTGAGGTTATTTTGC 57.008 37.500 0.07 0.00 0.00 3.68
5402 6087 6.475504 TCTGAGATTCTGAGGTTATTTTGCA 58.524 36.000 0.07 0.00 0.00 4.08
5403 6088 7.114754 TCTGAGATTCTGAGGTTATTTTGCAT 58.885 34.615 0.07 0.00 0.00 3.96
5404 6089 7.066645 TCTGAGATTCTGAGGTTATTTTGCATG 59.933 37.037 0.07 0.00 0.00 4.06
5405 6090 5.899299 AGATTCTGAGGTTATTTTGCATGC 58.101 37.500 11.82 11.82 0.00 4.06
5406 6091 5.419788 AGATTCTGAGGTTATTTTGCATGCA 59.580 36.000 18.46 18.46 0.00 3.96
5407 6092 4.439305 TCTGAGGTTATTTTGCATGCAC 57.561 40.909 22.58 7.61 0.00 4.57
5423 6108 0.662374 GCACTTGCATGTGACAGCAC 60.662 55.000 30.70 12.17 41.05 4.40
5511 6431 3.181493 GGGTTGATCAGCAGCAGTTTATG 60.181 47.826 11.93 0.00 0.00 1.90
5514 6434 5.505324 GGTTGATCAGCAGCAGTTTATGATC 60.505 44.000 11.93 11.42 44.15 2.92
5523 6471 6.152323 AGCAGCAGTTTATGATCATTTCTGTT 59.848 34.615 14.65 13.93 0.00 3.16
5524 6472 6.810182 GCAGCAGTTTATGATCATTTCTGTTT 59.190 34.615 14.65 9.60 0.00 2.83
5525 6473 7.970061 GCAGCAGTTTATGATCATTTCTGTTTA 59.030 33.333 14.65 0.00 0.00 2.01
5526 6474 9.282247 CAGCAGTTTATGATCATTTCTGTTTAC 57.718 33.333 14.65 7.37 0.00 2.01
5527 6475 9.013229 AGCAGTTTATGATCATTTCTGTTTACA 57.987 29.630 14.65 0.00 0.00 2.41
5528 6476 9.282247 GCAGTTTATGATCATTTCTGTTTACAG 57.718 33.333 14.65 3.47 45.08 2.74
5529 6477 9.282247 CAGTTTATGATCATTTCTGTTTACAGC 57.718 33.333 14.65 0.00 43.46 4.40
5530 6478 8.462016 AGTTTATGATCATTTCTGTTTACAGCC 58.538 33.333 14.65 0.00 43.46 4.85
5531 6479 7.936496 TTATGATCATTTCTGTTTACAGCCA 57.064 32.000 14.65 0.00 43.46 4.75
5532 6480 6.839124 ATGATCATTTCTGTTTACAGCCAA 57.161 33.333 1.18 1.65 43.46 4.52
5533 6481 6.647334 TGATCATTTCTGTTTACAGCCAAA 57.353 33.333 5.00 2.69 43.46 3.28
5534 6482 7.230849 TGATCATTTCTGTTTACAGCCAAAT 57.769 32.000 5.00 4.75 43.46 2.32
5535 6483 7.669427 TGATCATTTCTGTTTACAGCCAAATT 58.331 30.769 5.00 0.00 43.46 1.82
5536 6484 8.801299 TGATCATTTCTGTTTACAGCCAAATTA 58.199 29.630 5.00 0.61 43.46 1.40
5537 6485 9.807649 GATCATTTCTGTTTACAGCCAAATTAT 57.192 29.630 5.00 4.77 43.46 1.28
5607 6625 6.934083 AGGAGACAATCTCTTTCTGAAAGTTC 59.066 38.462 24.88 14.38 42.95 3.01
5660 6678 8.829612 AGCTTTTCTTTATTGTGAATTTGTTGG 58.170 29.630 0.00 0.00 0.00 3.77
5663 6681 9.883142 TTTTCTTTATTGTGAATTTGTTGGACT 57.117 25.926 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.072088 CAAACGGACACGCGCCTC 62.072 66.667 5.73 0.00 46.04 4.70
24 25 4.659874 CACCAAACGGACACGCGC 62.660 66.667 5.73 0.00 46.04 6.86
25 26 3.218209 GACACCAAACGGACACGCG 62.218 63.158 3.53 3.53 46.04 6.01
26 27 2.629763 GACACCAAACGGACACGC 59.370 61.111 0.00 0.00 46.04 5.34
28 29 2.888998 GCGGACACCAAACGGACAC 61.889 63.158 0.00 0.00 0.00 3.67
29 30 2.589442 GCGGACACCAAACGGACA 60.589 61.111 0.00 0.00 0.00 4.02
30 31 3.351416 GGCGGACACCAAACGGAC 61.351 66.667 0.00 0.00 0.00 4.79
31 32 4.973055 CGGCGGACACCAAACGGA 62.973 66.667 0.00 0.00 0.00 4.69
49 50 4.939368 TGCACCGGGTTTGGGTCG 62.939 66.667 6.32 0.00 34.97 4.79
50 51 2.282887 ATGCACCGGGTTTGGGTC 60.283 61.111 6.32 0.00 34.97 4.46
51 52 2.600173 CATGCACCGGGTTTGGGT 60.600 61.111 6.32 0.00 38.65 4.51
52 53 1.753368 AAACATGCACCGGGTTTGGG 61.753 55.000 6.32 0.00 33.78 4.12
53 54 0.599728 CAAACATGCACCGGGTTTGG 60.600 55.000 19.62 4.62 44.59 3.28
54 55 2.897780 CAAACATGCACCGGGTTTG 58.102 52.632 15.71 15.71 43.47 2.93
55 56 1.068921 GCAAACATGCACCGGGTTT 59.931 52.632 6.32 2.79 35.27 3.27
56 57 2.733945 GCAAACATGCACCGGGTT 59.266 55.556 6.32 0.00 34.41 4.11
57 58 3.669344 CGCAAACATGCACCGGGT 61.669 61.111 6.32 0.00 34.41 5.28
59 60 3.951655 GAGCGCAAACATGCACCGG 62.952 63.158 11.47 0.00 34.41 5.28
60 61 2.502510 GAGCGCAAACATGCACCG 60.503 61.111 11.47 0.00 34.41 4.94
61 62 2.456594 TTCGAGCGCAAACATGCACC 62.457 55.000 11.47 0.00 34.41 5.01
62 63 0.660005 TTTCGAGCGCAAACATGCAC 60.660 50.000 11.47 0.00 34.41 4.57
63 64 0.240678 ATTTCGAGCGCAAACATGCA 59.759 45.000 11.47 0.00 34.41 3.96
64 65 0.636733 CATTTCGAGCGCAAACATGC 59.363 50.000 11.47 0.00 0.00 4.06
65 66 1.261989 CCATTTCGAGCGCAAACATG 58.738 50.000 11.47 4.87 0.00 3.21
66 67 0.171007 CCCATTTCGAGCGCAAACAT 59.829 50.000 11.47 0.00 0.00 2.71
67 68 1.169661 ACCCATTTCGAGCGCAAACA 61.170 50.000 11.47 0.00 0.00 2.83
68 69 0.454452 GACCCATTTCGAGCGCAAAC 60.454 55.000 11.47 0.00 0.00 2.93
69 70 1.873165 GACCCATTTCGAGCGCAAA 59.127 52.632 11.47 1.09 0.00 3.68
70 71 2.387445 CGACCCATTTCGAGCGCAA 61.387 57.895 11.47 0.00 41.78 4.85
71 72 2.813474 CGACCCATTTCGAGCGCA 60.813 61.111 11.47 0.00 41.78 6.09
72 73 3.564027 CCGACCCATTTCGAGCGC 61.564 66.667 0.00 0.00 41.78 5.92
73 74 3.564027 GCCGACCCATTTCGAGCG 61.564 66.667 0.00 0.00 41.78 5.03
74 75 3.202706 GGCCGACCCATTTCGAGC 61.203 66.667 0.00 0.00 41.78 5.03
84 85 4.629523 TTTGTGTCCGGGCCGACC 62.630 66.667 30.79 17.72 31.35 4.79
85 86 2.592287 TTTTGTGTCCGGGCCGAC 60.592 61.111 30.79 22.88 0.00 4.79
86 87 2.592287 GTTTTGTGTCCGGGCCGA 60.592 61.111 30.79 11.12 0.00 5.54
87 88 4.020378 CGTTTTGTGTCCGGGCCG 62.020 66.667 21.46 21.46 0.00 6.13
88 89 3.666253 CCGTTTTGTGTCCGGGCC 61.666 66.667 2.12 0.00 38.09 5.80
89 90 2.592287 TCCGTTTTGTGTCCGGGC 60.592 61.111 0.00 0.00 41.98 6.13
90 91 2.255881 GGTCCGTTTTGTGTCCGGG 61.256 63.158 0.00 0.00 41.98 5.73
91 92 1.503818 CTGGTCCGTTTTGTGTCCGG 61.504 60.000 0.00 0.00 43.03 5.14
92 93 0.531090 TCTGGTCCGTTTTGTGTCCG 60.531 55.000 0.00 0.00 0.00 4.79
93 94 1.535462 CATCTGGTCCGTTTTGTGTCC 59.465 52.381 0.00 0.00 0.00 4.02
94 95 2.480419 CTCATCTGGTCCGTTTTGTGTC 59.520 50.000 0.00 0.00 0.00 3.67
95 96 2.158813 ACTCATCTGGTCCGTTTTGTGT 60.159 45.455 0.00 0.00 0.00 3.72
96 97 2.480419 GACTCATCTGGTCCGTTTTGTG 59.520 50.000 0.00 0.00 0.00 3.33
97 98 2.550208 GGACTCATCTGGTCCGTTTTGT 60.550 50.000 0.00 0.00 42.84 2.83
98 99 2.076863 GGACTCATCTGGTCCGTTTTG 58.923 52.381 0.00 0.00 42.84 2.44
99 100 2.474410 GGACTCATCTGGTCCGTTTT 57.526 50.000 0.00 0.00 42.84 2.43
108 109 3.432051 GACGGCCCGGACTCATCTG 62.432 68.421 8.57 0.00 0.00 2.90
109 110 3.148279 GACGGCCCGGACTCATCT 61.148 66.667 8.57 0.00 0.00 2.90
110 111 4.570663 CGACGGCCCGGACTCATC 62.571 72.222 8.57 0.00 0.00 2.92
137 138 1.778027 AAAACGGACAAACGAGGCGG 61.778 55.000 0.00 0.00 37.61 6.13
138 139 0.860533 TAAAACGGACAAACGAGGCG 59.139 50.000 0.00 0.00 37.61 5.52
139 140 1.069703 GGTAAAACGGACAAACGAGGC 60.070 52.381 0.00 0.00 37.61 4.70
140 141 1.532437 GGGTAAAACGGACAAACGAGG 59.468 52.381 0.00 0.00 37.61 4.63
141 142 1.532437 GGGGTAAAACGGACAAACGAG 59.468 52.381 0.00 0.00 37.61 4.18
142 143 1.134280 TGGGGTAAAACGGACAAACGA 60.134 47.619 0.00 0.00 37.61 3.85
143 144 1.307097 TGGGGTAAAACGGACAAACG 58.693 50.000 0.00 0.00 40.31 3.60
144 145 3.119209 TGTTTGGGGTAAAACGGACAAAC 60.119 43.478 10.21 10.21 44.58 2.93
145 146 3.094572 TGTTTGGGGTAAAACGGACAAA 58.905 40.909 0.00 0.00 41.92 2.83
146 147 2.731572 TGTTTGGGGTAAAACGGACAA 58.268 42.857 0.00 0.00 41.92 3.18
147 148 2.431954 TGTTTGGGGTAAAACGGACA 57.568 45.000 0.00 0.00 41.92 4.02
148 149 3.446799 GTTTGTTTGGGGTAAAACGGAC 58.553 45.455 0.00 0.00 41.92 4.79
149 150 2.098770 CGTTTGTTTGGGGTAAAACGGA 59.901 45.455 10.71 0.00 46.71 4.69
150 151 2.461903 CGTTTGTTTGGGGTAAAACGG 58.538 47.619 10.71 0.00 46.71 4.44
152 153 2.823984 CCCGTTTGTTTGGGGTAAAAC 58.176 47.619 0.00 0.00 42.05 2.43
159 160 3.984749 CGGCCCCGTTTGTTTGGG 61.985 66.667 0.00 0.00 45.58 4.12
160 161 3.984749 CCGGCCCCGTTTGTTTGG 61.985 66.667 5.93 0.00 37.81 3.28
161 162 2.907917 TCCGGCCCCGTTTGTTTG 60.908 61.111 5.93 0.00 37.81 2.93
162 163 2.908428 GTCCGGCCCCGTTTGTTT 60.908 61.111 5.93 0.00 37.81 2.83
163 164 4.192453 TGTCCGGCCCCGTTTGTT 62.192 61.111 5.93 0.00 37.81 2.83
164 165 4.636435 CTGTCCGGCCCCGTTTGT 62.636 66.667 5.93 0.00 37.81 2.83
173 174 4.176752 GACCCCATCCTGTCCGGC 62.177 72.222 0.00 0.00 0.00 6.13
174 175 3.849951 CGACCCCATCCTGTCCGG 61.850 72.222 0.00 0.00 0.00 5.14
175 176 4.530857 GCGACCCCATCCTGTCCG 62.531 72.222 0.00 0.00 0.00 4.79
176 177 4.530857 CGCGACCCCATCCTGTCC 62.531 72.222 0.00 0.00 0.00 4.02
192 193 3.599285 TAAGGCCAACTCCACCGCG 62.599 63.158 5.01 0.00 0.00 6.46
193 194 2.038837 GTAAGGCCAACTCCACCGC 61.039 63.158 5.01 0.00 0.00 5.68
194 195 0.673644 CTGTAAGGCCAACTCCACCG 60.674 60.000 5.01 0.00 0.00 4.94
195 196 0.400594 ACTGTAAGGCCAACTCCACC 59.599 55.000 5.01 0.00 39.30 4.61
196 197 2.152016 GAACTGTAAGGCCAACTCCAC 58.848 52.381 5.01 0.00 39.30 4.02
197 198 1.771854 TGAACTGTAAGGCCAACTCCA 59.228 47.619 5.01 0.00 39.30 3.86
198 199 2.552743 GTTGAACTGTAAGGCCAACTCC 59.447 50.000 5.01 0.00 42.80 3.85
199 200 3.211045 TGTTGAACTGTAAGGCCAACTC 58.789 45.455 5.01 0.00 44.80 3.01
200 201 3.290948 TGTTGAACTGTAAGGCCAACT 57.709 42.857 5.01 0.00 44.80 3.16
201 202 4.584327 AATGTTGAACTGTAAGGCCAAC 57.416 40.909 5.01 2.84 44.78 3.77
202 203 5.105146 ACAAAATGTTGAACTGTAAGGCCAA 60.105 36.000 5.01 0.00 36.78 4.52
203 204 4.404073 ACAAAATGTTGAACTGTAAGGCCA 59.596 37.500 5.01 0.00 36.78 5.36
204 205 4.944048 ACAAAATGTTGAACTGTAAGGCC 58.056 39.130 1.62 0.00 36.78 5.19
205 206 6.533367 TGAAACAAAATGTTGAACTGTAAGGC 59.467 34.615 1.62 0.00 40.14 4.35
206 207 8.647143 ATGAAACAAAATGTTGAACTGTAAGG 57.353 30.769 1.62 0.00 40.14 2.69
227 228 8.451748 CCTCGTCGTATCTCTTTCATATATGAA 58.548 37.037 21.67 21.67 44.42 2.57
228 229 7.822822 TCCTCGTCGTATCTCTTTCATATATGA 59.177 37.037 11.49 11.49 34.44 2.15
229 230 7.975750 TCCTCGTCGTATCTCTTTCATATATG 58.024 38.462 6.36 6.36 0.00 1.78
230 231 8.616942 CATCCTCGTCGTATCTCTTTCATATAT 58.383 37.037 0.00 0.00 0.00 0.86
231 232 7.822822 TCATCCTCGTCGTATCTCTTTCATATA 59.177 37.037 0.00 0.00 0.00 0.86
232 233 6.655425 TCATCCTCGTCGTATCTCTTTCATAT 59.345 38.462 0.00 0.00 0.00 1.78
233 234 5.995897 TCATCCTCGTCGTATCTCTTTCATA 59.004 40.000 0.00 0.00 0.00 2.15
234 235 4.822350 TCATCCTCGTCGTATCTCTTTCAT 59.178 41.667 0.00 0.00 0.00 2.57
235 236 4.196971 TCATCCTCGTCGTATCTCTTTCA 58.803 43.478 0.00 0.00 0.00 2.69
236 237 4.815040 TCATCCTCGTCGTATCTCTTTC 57.185 45.455 0.00 0.00 0.00 2.62
237 238 4.580995 ACATCATCCTCGTCGTATCTCTTT 59.419 41.667 0.00 0.00 0.00 2.52
238 239 4.138290 ACATCATCCTCGTCGTATCTCTT 58.862 43.478 0.00 0.00 0.00 2.85
239 240 3.745799 ACATCATCCTCGTCGTATCTCT 58.254 45.455 0.00 0.00 0.00 3.10
240 241 5.608676 TTACATCATCCTCGTCGTATCTC 57.391 43.478 0.00 0.00 0.00 2.75
241 242 5.531659 AGTTTACATCATCCTCGTCGTATCT 59.468 40.000 0.00 0.00 0.00 1.98
242 243 5.759963 AGTTTACATCATCCTCGTCGTATC 58.240 41.667 0.00 0.00 0.00 2.24
243 244 5.769484 AGTTTACATCATCCTCGTCGTAT 57.231 39.130 0.00 0.00 0.00 3.06
244 245 5.585844 TGTAGTTTACATCATCCTCGTCGTA 59.414 40.000 0.00 0.00 32.89 3.43
245 246 4.397103 TGTAGTTTACATCATCCTCGTCGT 59.603 41.667 0.00 0.00 32.89 4.34
246 247 4.916870 TGTAGTTTACATCATCCTCGTCG 58.083 43.478 0.00 0.00 32.89 5.12
247 248 7.772332 ATTTGTAGTTTACATCATCCTCGTC 57.228 36.000 0.00 0.00 38.68 4.20
248 249 9.832445 ATTATTTGTAGTTTACATCATCCTCGT 57.168 29.630 0.00 0.00 38.68 4.18
252 253 9.884465 GCTCATTATTTGTAGTTTACATCATCC 57.116 33.333 0.00 0.00 38.68 3.51
253 254 9.884465 GGCTCATTATTTGTAGTTTACATCATC 57.116 33.333 0.00 0.00 38.68 2.92
254 255 9.632638 AGGCTCATTATTTGTAGTTTACATCAT 57.367 29.630 0.00 0.00 38.68 2.45
255 256 9.109393 GAGGCTCATTATTTGTAGTTTACATCA 57.891 33.333 10.25 0.00 38.68 3.07
256 257 9.331282 AGAGGCTCATTATTTGTAGTTTACATC 57.669 33.333 18.26 0.00 38.68 3.06
258 259 9.817809 CTAGAGGCTCATTATTTGTAGTTTACA 57.182 33.333 18.26 0.00 36.79 2.41
259 260 8.766151 GCTAGAGGCTCATTATTTGTAGTTTAC 58.234 37.037 18.26 0.00 38.06 2.01
260 261 8.888579 GCTAGAGGCTCATTATTTGTAGTTTA 57.111 34.615 18.26 0.00 38.06 2.01
458 459 3.181543 GCACGACGAGTTAGTTGATTGTC 60.182 47.826 0.00 0.00 0.00 3.18
619 628 3.870274 TGATGATCTGAGCTTCTTGGTG 58.130 45.455 9.71 0.00 0.00 4.17
620 629 4.163649 TGATGATGATCTGAGCTTCTTGGT 59.836 41.667 9.71 0.00 0.00 3.67
621 630 4.704965 TGATGATGATCTGAGCTTCTTGG 58.295 43.478 9.71 0.00 0.00 3.61
622 631 6.458478 GGTTTGATGATGATCTGAGCTTCTTG 60.458 42.308 9.71 0.00 0.00 3.02
623 632 5.589452 GGTTTGATGATGATCTGAGCTTCTT 59.411 40.000 9.71 4.09 0.00 2.52
624 633 5.124645 GGTTTGATGATGATCTGAGCTTCT 58.875 41.667 9.71 0.00 0.00 2.85
799 808 2.409870 GGGAGGCAACAGCAATCCG 61.410 63.158 0.00 0.00 36.85 4.18
1237 1700 1.265905 GAAGTAACAGCACAAACGGGG 59.734 52.381 0.00 0.00 0.00 5.73
1242 1705 5.830912 CAAGAATGGAAGTAACAGCACAAA 58.169 37.500 0.00 0.00 0.00 2.83
1313 1776 4.262121 GCACATCATTTGCCAGCCATTATA 60.262 41.667 0.00 0.00 33.58 0.98
1324 1787 1.059979 CGCACATTGCACATCATTTGC 59.940 47.619 0.00 0.00 45.36 3.68
1334 1797 1.603171 ATCCCACACGCACATTGCA 60.603 52.632 0.00 0.00 45.36 4.08
1341 1804 0.179032 AAAGTCACATCCCACACGCA 60.179 50.000 0.00 0.00 0.00 5.24
1344 1807 1.956477 AGCAAAAGTCACATCCCACAC 59.044 47.619 0.00 0.00 0.00 3.82
1364 1827 3.900601 AGTTATTCACCACCCAAATTGCA 59.099 39.130 0.00 0.00 0.00 4.08
1372 1835 3.023832 CCATCCAAGTTATTCACCACCC 58.976 50.000 0.00 0.00 0.00 4.61
1374 1837 3.697166 ACCCATCCAAGTTATTCACCAC 58.303 45.455 0.00 0.00 0.00 4.16
1389 1852 5.422012 ACCATTGATTTAGGTCAAACCCATC 59.578 40.000 0.00 0.00 41.09 3.51
1408 1871 6.238842 GCAGATGCAGATAACAATGTACCATT 60.239 38.462 0.00 0.00 41.59 3.16
1435 1898 7.117812 ACAGAAACTCATGTTATTAACGACCAG 59.882 37.037 2.30 0.00 34.96 4.00
1451 1914 7.015292 ACCATAGACTGAAGTAACAGAAACTCA 59.985 37.037 0.00 0.00 40.63 3.41
1454 1917 7.329717 CAGACCATAGACTGAAGTAACAGAAAC 59.670 40.741 0.00 0.00 37.92 2.78
1459 1922 6.665992 AACAGACCATAGACTGAAGTAACA 57.334 37.500 0.00 0.00 37.92 2.41
1466 1929 3.451178 GGCCTAAACAGACCATAGACTGA 59.549 47.826 0.00 0.00 37.92 3.41
1474 1937 3.244630 ACATAAACGGCCTAAACAGACCA 60.245 43.478 0.00 0.00 0.00 4.02
1479 1942 3.143211 ACCACATAAACGGCCTAAACA 57.857 42.857 0.00 0.00 0.00 2.83
1516 1979 6.470278 ACTAAGTAAACGGTTAATCAGCCTT 58.530 36.000 0.00 0.00 0.00 4.35
1536 1999 3.002791 CTCCGCAGCTCAATGAAACTAA 58.997 45.455 0.00 0.00 0.00 2.24
1537 2000 2.233676 TCTCCGCAGCTCAATGAAACTA 59.766 45.455 0.00 0.00 0.00 2.24
1568 2031 8.795842 ATACTTATCTTCTATACAGGAGACCG 57.204 38.462 0.00 0.00 39.34 4.79
1593 2181 5.592054 CTTCTTCATAAGCATCCTCGTGTA 58.408 41.667 0.00 0.00 0.00 2.90
1639 2234 7.282901 TCACTGAACAATCAAGACATTCTCAAA 59.717 33.333 0.00 0.00 34.49 2.69
1643 2238 6.528321 TCTCACTGAACAATCAAGACATTCT 58.472 36.000 0.00 0.00 34.49 2.40
1644 2239 6.791887 TCTCACTGAACAATCAAGACATTC 57.208 37.500 0.00 0.00 34.49 2.67
1645 2240 7.572523 TTTCTCACTGAACAATCAAGACATT 57.427 32.000 0.00 0.00 34.49 2.71
1646 2241 7.756395 ATTTCTCACTGAACAATCAAGACAT 57.244 32.000 0.00 0.00 34.49 3.06
1647 2242 7.572523 AATTTCTCACTGAACAATCAAGACA 57.427 32.000 0.00 0.00 34.49 3.41
1648 2243 8.778358 ACTAATTTCTCACTGAACAATCAAGAC 58.222 33.333 0.00 0.00 34.49 3.01
1649 2244 8.908786 ACTAATTTCTCACTGAACAATCAAGA 57.091 30.769 0.00 0.00 34.49 3.02
1680 2275 5.803020 ATGTTTGCGGCTTTAAACAAAAA 57.197 30.435 17.41 0.38 46.21 1.94
1688 2283 2.103263 ACCCAAAATGTTTGCGGCTTTA 59.897 40.909 0.00 0.00 0.00 1.85
1689 2284 1.134250 ACCCAAAATGTTTGCGGCTTT 60.134 42.857 0.00 0.00 0.00 3.51
1698 2293 4.407365 CTGTCCTTCCTACCCAAAATGTT 58.593 43.478 0.00 0.00 0.00 2.71
1702 2297 1.074889 GCCTGTCCTTCCTACCCAAAA 59.925 52.381 0.00 0.00 0.00 2.44
1707 2302 1.627297 CCAGGCCTGTCCTTCCTACC 61.627 65.000 30.63 0.00 44.75 3.18
1708 2303 1.908483 CCAGGCCTGTCCTTCCTAC 59.092 63.158 30.63 0.00 44.75 3.18
1709 2304 1.995626 GCCAGGCCTGTCCTTCCTA 60.996 63.158 30.63 0.00 44.75 2.94
1712 2307 2.360475 GTGCCAGGCCTGTCCTTC 60.360 66.667 30.63 14.28 44.75 3.46
1713 2308 3.177884 TGTGCCAGGCCTGTCCTT 61.178 61.111 30.63 0.00 44.75 3.36
1715 2310 3.958860 ACTGTGCCAGGCCTGTCC 61.959 66.667 30.63 20.92 35.51 4.02
1716 2311 2.670934 CACTGTGCCAGGCCTGTC 60.671 66.667 30.63 20.39 35.51 3.51
1717 2312 4.275508 CCACTGTGCCAGGCCTGT 62.276 66.667 30.63 8.87 35.51 4.00
1718 2313 4.275508 ACCACTGTGCCAGGCCTG 62.276 66.667 26.87 26.87 35.51 4.85
1719 2314 4.275508 CACCACTGTGCCAGGCCT 62.276 66.667 9.64 0.00 35.51 5.19
1720 2315 3.190738 TACACCACTGTGCCAGGCC 62.191 63.158 9.64 0.00 46.86 5.19
1721 2316 1.672356 CTACACCACTGTGCCAGGC 60.672 63.158 3.66 3.66 46.86 4.85
1722 2317 0.973632 TACTACACCACTGTGCCAGG 59.026 55.000 1.29 0.00 46.86 4.45
1723 2318 2.080286 GTACTACACCACTGTGCCAG 57.920 55.000 1.29 1.16 46.86 4.85
1751 2346 2.528818 CCCAGGACCTCTTGGCACA 61.529 63.158 0.00 0.00 41.31 4.57
1752 2347 2.069165 AACCCAGGACCTCTTGGCAC 62.069 60.000 0.00 0.00 41.31 5.01
1753 2348 1.774217 AACCCAGGACCTCTTGGCA 60.774 57.895 0.00 0.00 41.31 4.92
1754 2349 1.002011 GAACCCAGGACCTCTTGGC 60.002 63.158 0.00 0.00 41.31 4.52
1755 2350 1.192146 TCGAACCCAGGACCTCTTGG 61.192 60.000 0.00 0.00 42.20 3.61
1756 2351 0.037232 GTCGAACCCAGGACCTCTTG 60.037 60.000 0.00 0.00 0.00 3.02
1757 2352 1.533469 CGTCGAACCCAGGACCTCTT 61.533 60.000 0.00 0.00 0.00 2.85
1758 2353 1.977544 CGTCGAACCCAGGACCTCT 60.978 63.158 0.00 0.00 0.00 3.69
1759 2354 2.572284 CGTCGAACCCAGGACCTC 59.428 66.667 0.00 0.00 0.00 3.85
1760 2355 3.692406 GCGTCGAACCCAGGACCT 61.692 66.667 0.00 0.00 0.00 3.85
1761 2356 3.934391 CTGCGTCGAACCCAGGACC 62.934 68.421 0.00 0.00 0.00 4.46
1762 2357 2.432628 CTGCGTCGAACCCAGGAC 60.433 66.667 0.00 0.00 0.00 3.85
1763 2358 4.373116 GCTGCGTCGAACCCAGGA 62.373 66.667 0.00 0.00 0.00 3.86
1765 2360 4.379243 AGGCTGCGTCGAACCCAG 62.379 66.667 0.00 0.00 0.00 4.45
1766 2361 4.373116 GAGGCTGCGTCGAACCCA 62.373 66.667 6.59 0.00 0.00 4.51
1767 2362 3.991536 GAGAGGCTGCGTCGAACCC 62.992 68.421 15.71 0.00 0.00 4.11
1768 2363 2.507324 GAGAGGCTGCGTCGAACC 60.507 66.667 15.71 4.47 0.00 3.62
1769 2364 1.803519 CAGAGAGGCTGCGTCGAAC 60.804 63.158 15.71 11.51 37.90 3.95
1770 2365 2.568612 CAGAGAGGCTGCGTCGAA 59.431 61.111 15.71 0.00 37.90 3.71
1778 2373 0.677098 CAGTGCAATGCAGAGAGGCT 60.677 55.000 8.73 0.00 40.08 4.58
1779 2374 0.959372 ACAGTGCAATGCAGAGAGGC 60.959 55.000 15.18 0.00 40.08 4.70
1780 2375 0.803117 CACAGTGCAATGCAGAGAGG 59.197 55.000 15.18 0.00 40.08 3.69
1781 2376 0.168348 GCACAGTGCAATGCAGAGAG 59.832 55.000 21.22 3.99 44.26 3.20
1782 2377 2.250646 GCACAGTGCAATGCAGAGA 58.749 52.632 21.22 0.00 44.26 3.10
1783 2378 4.861883 GCACAGTGCAATGCAGAG 57.138 55.556 21.22 6.74 44.26 3.35
1792 2387 1.675641 CCTTACCCCTGCACAGTGC 60.676 63.158 19.37 19.37 45.29 4.40
1793 2388 1.675641 GCCTTACCCCTGCACAGTG 60.676 63.158 0.00 0.00 0.00 3.66
1794 2389 1.427072 AAGCCTTACCCCTGCACAGT 61.427 55.000 0.00 0.00 0.00 3.55
1795 2390 0.962356 CAAGCCTTACCCCTGCACAG 60.962 60.000 0.00 0.00 0.00 3.66
1796 2391 1.074775 CAAGCCTTACCCCTGCACA 59.925 57.895 0.00 0.00 0.00 4.57
1797 2392 2.343426 GCAAGCCTTACCCCTGCAC 61.343 63.158 0.00 0.00 0.00 4.57
1798 2393 2.035626 GCAAGCCTTACCCCTGCA 59.964 61.111 0.00 0.00 0.00 4.41
1799 2394 2.755876 GGCAAGCCTTACCCCTGC 60.756 66.667 3.29 0.00 0.00 4.85
1800 2395 3.090765 AGGCAAGCCTTACCCCTG 58.909 61.111 8.02 0.00 45.70 4.45
1805 2400 7.504146 GAAGGATTATACGAGGCAAGCCTTAC 61.504 46.154 15.84 2.24 45.46 2.34
1806 2401 5.510861 GAAGGATTATACGAGGCAAGCCTTA 60.511 44.000 15.84 4.98 45.46 2.69
1809 2404 2.841442 AGGATTATACGAGGCAAGCC 57.159 50.000 2.02 2.02 0.00 4.35
1810 2405 3.067833 GGAAGGATTATACGAGGCAAGC 58.932 50.000 0.00 0.00 0.00 4.01
1811 2406 3.557264 GGGGAAGGATTATACGAGGCAAG 60.557 52.174 0.00 0.00 0.00 4.01
1812 2407 2.370849 GGGGAAGGATTATACGAGGCAA 59.629 50.000 0.00 0.00 0.00 4.52
1813 2408 1.975680 GGGGAAGGATTATACGAGGCA 59.024 52.381 0.00 0.00 0.00 4.75
1814 2409 1.975680 TGGGGAAGGATTATACGAGGC 59.024 52.381 0.00 0.00 0.00 4.70
1815 2410 3.258622 GTCTGGGGAAGGATTATACGAGG 59.741 52.174 0.00 0.00 0.00 4.63
1816 2411 3.258622 GGTCTGGGGAAGGATTATACGAG 59.741 52.174 0.00 0.00 0.00 4.18
1817 2412 3.236896 GGTCTGGGGAAGGATTATACGA 58.763 50.000 0.00 0.00 0.00 3.43
1818 2413 2.302157 GGGTCTGGGGAAGGATTATACG 59.698 54.545 0.00 0.00 0.00 3.06
1819 2414 2.643304 GGGGTCTGGGGAAGGATTATAC 59.357 54.545 0.00 0.00 0.00 1.47
1820 2415 2.254293 TGGGGTCTGGGGAAGGATTATA 59.746 50.000 0.00 0.00 0.00 0.98
1821 2416 1.012049 TGGGGTCTGGGGAAGGATTAT 59.988 52.381 0.00 0.00 0.00 1.28
1822 2417 0.423956 TGGGGTCTGGGGAAGGATTA 59.576 55.000 0.00 0.00 0.00 1.75
1823 2418 1.165782 TGGGGTCTGGGGAAGGATT 59.834 57.895 0.00 0.00 0.00 3.01
1824 2419 1.619669 GTGGGGTCTGGGGAAGGAT 60.620 63.158 0.00 0.00 0.00 3.24
1825 2420 2.204090 GTGGGGTCTGGGGAAGGA 60.204 66.667 0.00 0.00 0.00 3.36
1826 2421 3.339093 GGTGGGGTCTGGGGAAGG 61.339 72.222 0.00 0.00 0.00 3.46
1827 2422 2.204151 AGGTGGGGTCTGGGGAAG 60.204 66.667 0.00 0.00 0.00 3.46
1828 2423 2.531685 CAGGTGGGGTCTGGGGAA 60.532 66.667 0.00 0.00 0.00 3.97
1829 2424 4.675303 CCAGGTGGGGTCTGGGGA 62.675 72.222 2.40 0.00 45.95 4.81
1841 2436 1.072331 CTTGAAGCTACCACACCAGGT 59.928 52.381 0.00 0.00 45.72 4.00
1842 2437 1.611673 CCTTGAAGCTACCACACCAGG 60.612 57.143 0.00 0.00 0.00 4.45
1843 2438 1.347707 TCCTTGAAGCTACCACACCAG 59.652 52.381 0.00 0.00 0.00 4.00
1844 2439 1.071699 GTCCTTGAAGCTACCACACCA 59.928 52.381 0.00 0.00 0.00 4.17
1845 2440 1.348036 AGTCCTTGAAGCTACCACACC 59.652 52.381 0.00 0.00 0.00 4.16
1846 2441 2.417719 CAGTCCTTGAAGCTACCACAC 58.582 52.381 0.00 0.00 0.00 3.82
1847 2442 1.347707 CCAGTCCTTGAAGCTACCACA 59.652 52.381 0.00 0.00 0.00 4.17
1848 2443 1.339151 CCCAGTCCTTGAAGCTACCAC 60.339 57.143 0.00 0.00 0.00 4.16
1849 2444 0.984230 CCCAGTCCTTGAAGCTACCA 59.016 55.000 0.00 0.00 0.00 3.25
1850 2445 0.984995 ACCCAGTCCTTGAAGCTACC 59.015 55.000 0.00 0.00 0.00 3.18
1851 2446 1.903183 AGACCCAGTCCTTGAAGCTAC 59.097 52.381 0.00 0.00 32.18 3.58
1852 2447 1.902508 CAGACCCAGTCCTTGAAGCTA 59.097 52.381 0.00 0.00 32.18 3.32
1853 2448 0.689623 CAGACCCAGTCCTTGAAGCT 59.310 55.000 0.00 0.00 32.18 3.74
1854 2449 0.398318 ACAGACCCAGTCCTTGAAGC 59.602 55.000 0.00 0.00 32.18 3.86
1855 2450 2.464157 GACAGACCCAGTCCTTGAAG 57.536 55.000 0.00 0.00 32.18 3.02
1862 2457 1.066071 GGCTTAAGGACAGACCCAGTC 60.066 57.143 4.29 0.00 40.05 3.51
1863 2458 0.984995 GGCTTAAGGACAGACCCAGT 59.015 55.000 4.29 0.00 40.05 4.00
1864 2459 0.984230 TGGCTTAAGGACAGACCCAG 59.016 55.000 4.29 0.00 40.05 4.45
1865 2460 1.281867 CATGGCTTAAGGACAGACCCA 59.718 52.381 4.29 1.38 35.79 4.51
1866 2461 1.559682 TCATGGCTTAAGGACAGACCC 59.440 52.381 4.29 0.00 35.79 4.46
1867 2462 3.350219 TTCATGGCTTAAGGACAGACC 57.650 47.619 4.29 0.00 35.79 3.85
1868 2463 4.517285 TCATTCATGGCTTAAGGACAGAC 58.483 43.478 4.29 0.00 35.79 3.51
1869 2464 4.842531 TCATTCATGGCTTAAGGACAGA 57.157 40.909 4.29 0.00 35.79 3.41
1870 2465 5.180868 GCTATCATTCATGGCTTAAGGACAG 59.819 44.000 4.29 0.00 35.79 3.51
1871 2466 5.065914 GCTATCATTCATGGCTTAAGGACA 58.934 41.667 4.29 0.00 36.07 4.02
1872 2467 5.312079 AGCTATCATTCATGGCTTAAGGAC 58.688 41.667 4.29 0.00 46.89 3.85
1873 2468 5.573380 AGCTATCATTCATGGCTTAAGGA 57.427 39.130 4.29 0.00 46.89 3.36
1874 2469 9.053840 CATATAGCTATCATTCATGGCTTAAGG 57.946 37.037 10.16 0.00 46.89 2.69
1875 2470 8.557864 GCATATAGCTATCATTCATGGCTTAAG 58.442 37.037 10.16 0.00 46.89 1.85
1876 2471 8.048514 TGCATATAGCTATCATTCATGGCTTAA 58.951 33.333 10.16 0.00 46.89 1.85
1904 2499 3.737047 GCAAGATATCGAAACGAGGGTCA 60.737 47.826 0.00 0.00 39.91 4.02
1905 2500 2.795470 GCAAGATATCGAAACGAGGGTC 59.205 50.000 0.00 0.00 39.91 4.46
1911 2506 4.268644 ACATCAGTGCAAGATATCGAAACG 59.731 41.667 2.87 0.00 0.00 3.60
1938 2552 2.762887 TCTCTGTAGCAGTTCCCAGATG 59.237 50.000 0.00 0.00 33.77 2.90
1940 2554 2.563179 GTTCTCTGTAGCAGTTCCCAGA 59.437 50.000 0.00 0.00 32.61 3.86
1941 2555 2.354203 GGTTCTCTGTAGCAGTTCCCAG 60.354 54.545 0.00 0.00 32.61 4.45
1996 2610 9.220759 GGGATACAAAGAACTATGGTTCCAGGA 62.221 44.444 17.41 5.89 45.61 3.86
1997 2611 7.135741 GGGATACAAAGAACTATGGTTCCAGG 61.136 46.154 17.41 9.87 45.61 4.45
1998 2612 5.823045 GGGATACAAAGAACTATGGTTCCAG 59.177 44.000 17.41 10.50 45.61 3.86
1999 2613 5.251932 TGGGATACAAAGAACTATGGTTCCA 59.748 40.000 17.41 3.99 45.61 3.53
2000 2614 5.751586 TGGGATACAAAGAACTATGGTTCC 58.248 41.667 17.41 1.28 45.61 3.62
2001 2615 6.486993 GGATGGGATACAAAGAACTATGGTTC 59.513 42.308 13.69 13.69 45.16 3.62
2002 2616 6.365520 GGATGGGATACAAAGAACTATGGTT 58.634 40.000 0.00 0.00 36.89 3.67
2003 2617 5.163088 GGGATGGGATACAAAGAACTATGGT 60.163 44.000 0.00 0.00 39.74 3.55
2004 2618 5.163099 TGGGATGGGATACAAAGAACTATGG 60.163 44.000 0.00 0.00 39.74 2.74
2005 2619 5.940617 TGGGATGGGATACAAAGAACTATG 58.059 41.667 0.00 0.00 39.74 2.23
2006 2620 5.911178 TCTGGGATGGGATACAAAGAACTAT 59.089 40.000 0.00 0.00 39.74 2.12
2007 2621 5.285401 TCTGGGATGGGATACAAAGAACTA 58.715 41.667 0.00 0.00 39.74 2.24
2008 2622 4.111577 TCTGGGATGGGATACAAAGAACT 58.888 43.478 0.00 0.00 39.74 3.01
2009 2623 4.455606 CTCTGGGATGGGATACAAAGAAC 58.544 47.826 0.00 0.00 39.74 3.01
2010 2624 3.459598 CCTCTGGGATGGGATACAAAGAA 59.540 47.826 0.00 0.00 33.52 2.52
2011 2625 3.048600 CCTCTGGGATGGGATACAAAGA 58.951 50.000 0.00 0.00 33.52 2.52
2012 2626 3.048600 TCCTCTGGGATGGGATACAAAG 58.951 50.000 0.00 0.00 36.57 2.77
2013 2627 3.144068 TCCTCTGGGATGGGATACAAA 57.856 47.619 0.00 0.00 36.57 2.83
2014 2628 2.777692 GTTCCTCTGGGATGGGATACAA 59.222 50.000 0.00 0.00 41.87 2.41
2015 2629 2.293519 TGTTCCTCTGGGATGGGATACA 60.294 50.000 0.00 0.00 41.87 2.29
2016 2630 2.104963 GTGTTCCTCTGGGATGGGATAC 59.895 54.545 0.00 0.00 41.87 2.24
2017 2631 2.022035 AGTGTTCCTCTGGGATGGGATA 60.022 50.000 0.00 0.00 41.87 2.59
2018 2632 1.216990 GTGTTCCTCTGGGATGGGAT 58.783 55.000 0.00 0.00 41.87 3.85
2019 2633 0.119155 AGTGTTCCTCTGGGATGGGA 59.881 55.000 0.00 0.00 41.87 4.37
2020 2634 0.254178 CAGTGTTCCTCTGGGATGGG 59.746 60.000 0.00 0.00 41.87 4.00
2021 2635 0.393537 GCAGTGTTCCTCTGGGATGG 60.394 60.000 0.00 0.00 41.87 3.51
2022 2636 0.393537 GGCAGTGTTCCTCTGGGATG 60.394 60.000 0.00 0.00 41.87 3.51
2023 2637 0.842030 TGGCAGTGTTCCTCTGGGAT 60.842 55.000 0.00 0.00 41.87 3.85
2024 2638 0.842030 ATGGCAGTGTTCCTCTGGGA 60.842 55.000 0.00 0.00 40.36 4.37
2036 2650 4.278170 TGATTTTTCAGAAACGATGGCAGT 59.722 37.500 0.00 0.00 0.00 4.40
2065 2679 3.494398 GGGCATAACATTTAGAGGAGCGA 60.494 47.826 0.00 0.00 0.00 4.93
2068 2682 5.070981 TCTCTGGGCATAACATTTAGAGGAG 59.929 44.000 0.00 0.00 33.00 3.69
2069 2683 4.968719 TCTCTGGGCATAACATTTAGAGGA 59.031 41.667 0.00 0.00 33.00 3.71
2070 2684 5.296151 TCTCTGGGCATAACATTTAGAGG 57.704 43.478 0.00 0.00 33.00 3.69
2071 2685 7.630242 TTTTCTCTGGGCATAACATTTAGAG 57.370 36.000 0.00 0.00 33.33 2.43
2162 2776 9.566432 AATCAAACAATAGAACAGAAGAGAAGT 57.434 29.630 0.00 0.00 0.00 3.01
2209 2823 6.395629 CCGTCGAGGTATCATGGTAAATAAT 58.604 40.000 4.18 0.00 34.51 1.28
2218 2832 2.154854 ATTGCCGTCGAGGTATCATG 57.845 50.000 4.18 0.00 43.70 3.07
2221 2835 5.668558 AAAATAATTGCCGTCGAGGTATC 57.331 39.130 4.18 0.00 43.70 2.24
2228 2842 7.653523 ACGTAAAATAAAATAATTGCCGTCG 57.346 32.000 0.00 0.00 0.00 5.12
2259 2873 1.077716 ACGGCCAAGTAATGAGGGC 60.078 57.895 2.24 0.00 45.67 5.19
2269 2883 1.593196 TGTTTGAGAAGACGGCCAAG 58.407 50.000 2.24 0.00 0.00 3.61
2286 2900 9.768662 AGTTTAAGCATTGAAGAAAAATCATGT 57.231 25.926 0.00 0.00 0.00 3.21
2314 2928 8.089597 TGACTGGACAAATTATACAAACGTAGA 58.910 33.333 0.00 0.00 0.00 2.59
2315 2929 8.246908 TGACTGGACAAATTATACAAACGTAG 57.753 34.615 0.00 0.00 0.00 3.51
2320 2935 9.295825 AGTGATTGACTGGACAAATTATACAAA 57.704 29.630 0.00 0.00 31.75 2.83
2576 3192 4.326826 CCACTTTTAGATCAACAGGAGCA 58.673 43.478 0.00 0.00 33.23 4.26
2578 3194 4.326826 TGCCACTTTTAGATCAACAGGAG 58.673 43.478 0.00 0.00 0.00 3.69
2769 3385 7.447545 AGTGGATGAAAGGTAAAACTTTAGGTC 59.552 37.037 0.00 0.00 40.55 3.85
2772 3388 7.665974 AGGAGTGGATGAAAGGTAAAACTTTAG 59.334 37.037 0.00 0.00 40.55 1.85
3141 3757 7.566879 AGGATAGGTCTTCTTGTCAGTAATGAT 59.433 37.037 0.00 0.00 0.00 2.45
3275 3891 5.009410 GGCAATGTGCTGAATTTCTATAGCT 59.991 40.000 8.23 0.00 44.28 3.32
3585 4203 4.660789 GCAATATTGGTTGCCTCTTGAT 57.339 40.909 17.02 0.00 46.69 2.57
3621 4239 7.970061 GCACTTTCAATTGCTATACATTTCTGA 59.030 33.333 0.00 0.00 35.74 3.27
3708 4326 8.043710 CCACCATAGAAATCTTCTCTACAGTTT 58.956 37.037 0.00 0.00 41.14 2.66
3724 4342 3.198409 CAGCTATGCACCACCATAGAA 57.802 47.619 12.06 0.00 44.73 2.10
3741 4359 5.659048 AGAAGCATTAATAAGTACGCAGC 57.341 39.130 0.00 0.00 0.00 5.25
3999 4617 2.665165 TCAAAGTTGGTGGCAATGAGT 58.335 42.857 0.00 0.00 0.00 3.41
4041 4659 6.549433 AGGTCAAAAATGTTCATGCCATAT 57.451 33.333 0.00 0.00 0.00 1.78
4086 4704 8.923270 ACCCAATGGTGGTATTTATCTTTAATG 58.077 33.333 0.00 0.00 45.58 1.90
4230 4888 8.406643 TGGAAATAGTGATATATACTCCCTCCA 58.593 37.037 9.85 9.85 31.78 3.86
4290 4950 8.278729 TGAAATGGCAAAAAGAAAAGAAATGT 57.721 26.923 0.00 0.00 0.00 2.71
4406 5066 7.453393 TCTCCAAATATTTGAGAAGTCAGTGT 58.547 34.615 26.32 0.00 40.55 3.55
4439 5099 3.619038 AGCTATACTTTTTCAGCAGCGAC 59.381 43.478 0.00 0.00 36.47 5.19
4499 5159 8.289618 GTGTAAACTATCATGTGAAGCAGAAAA 58.710 33.333 0.00 0.00 0.00 2.29
4571 5255 1.069358 GAATAAGACTGGAGCTCCCCG 59.931 57.143 29.95 22.00 34.29 5.73
4574 5258 3.190874 CAACGAATAAGACTGGAGCTCC 58.809 50.000 26.78 26.78 0.00 4.70
4592 5276 8.082242 AGATTCTGCAGGTAAAATAAACACAAC 58.918 33.333 15.13 0.00 0.00 3.32
4597 5281 8.515414 ACTTCAGATTCTGCAGGTAAAATAAAC 58.485 33.333 15.13 0.00 29.44 2.01
4601 5285 6.240894 TGACTTCAGATTCTGCAGGTAAAAT 58.759 36.000 15.13 5.93 29.44 1.82
4606 5291 3.777106 TTGACTTCAGATTCTGCAGGT 57.223 42.857 15.13 10.72 29.44 4.00
4697 5382 0.327924 AAAGGTGCCACGATGGATCA 59.672 50.000 8.04 0.00 40.96 2.92
4742 5427 5.594725 TGCTTTCCGAACACTAGAGATATCT 59.405 40.000 4.47 4.47 0.00 1.98
4805 5490 6.968263 TGGAGATGTTTAAAACCAATGTCA 57.032 33.333 0.00 0.00 0.00 3.58
5001 5686 6.435430 TCTGCACATGTAACCAATTATGTC 57.565 37.500 0.00 0.00 31.84 3.06
5178 5863 5.591877 GGACTATCATCAACTCTGCCAAATT 59.408 40.000 0.00 0.00 0.00 1.82
5208 5893 5.073311 TCACTCTCCAGCAATTACAGTAC 57.927 43.478 0.00 0.00 0.00 2.73
5387 6072 4.445452 AGTGCATGCAAAATAACCTCAG 57.555 40.909 24.58 0.00 0.00 3.35
5388 6073 4.558178 CAAGTGCATGCAAAATAACCTCA 58.442 39.130 24.58 0.00 0.00 3.86
5389 6074 3.368843 GCAAGTGCATGCAAAATAACCTC 59.631 43.478 24.58 6.49 45.70 3.85
5390 6075 3.328505 GCAAGTGCATGCAAAATAACCT 58.671 40.909 24.58 10.63 45.70 3.50
5391 6076 3.727780 GCAAGTGCATGCAAAATAACC 57.272 42.857 24.58 8.13 45.70 2.85
5403 6088 3.271516 GTGCTGTCACATGCAAGTGCA 62.272 52.381 17.03 15.85 44.81 4.57
5404 6089 0.662374 GTGCTGTCACATGCAAGTGC 60.662 55.000 17.03 12.35 42.66 4.40
5405 6090 0.039798 GGTGCTGTCACATGCAAGTG 60.040 55.000 15.79 15.79 44.87 3.16
5406 6091 0.466007 TGGTGCTGTCACATGCAAGT 60.466 50.000 3.82 0.00 44.87 3.16
5407 6092 0.240145 CTGGTGCTGTCACATGCAAG 59.760 55.000 3.82 0.00 44.87 4.01
5423 6108 4.741321 AACAATATGGCCAAATGACTGG 57.259 40.909 10.96 0.00 39.71 4.00
5511 6431 9.807649 ATAATTTGGCTGTAAACAGAAATGATC 57.192 29.630 14.21 0.00 46.59 2.92
5544 6492 7.223260 TTGAAGAACAAGAATCATGCAGATT 57.777 32.000 10.07 10.07 40.42 2.40
5545 6493 6.829229 TTGAAGAACAAGAATCATGCAGAT 57.171 33.333 0.00 0.00 34.67 2.90
5546 6494 6.829229 ATTGAAGAACAAGAATCATGCAGA 57.171 33.333 0.00 0.00 42.02 4.26
5547 6495 7.813148 AGAAATTGAAGAACAAGAATCATGCAG 59.187 33.333 0.00 0.00 42.02 4.41
5548 6496 7.663827 AGAAATTGAAGAACAAGAATCATGCA 58.336 30.769 0.00 0.00 42.02 3.96
5549 6497 8.530269 AAGAAATTGAAGAACAAGAATCATGC 57.470 30.769 0.00 0.00 42.02 4.06
5660 6678 1.474330 CCAATTGGGCCACCTAAGTC 58.526 55.000 17.36 0.00 37.76 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.