Multiple sequence alignment - TraesCS5D01G085900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G085900 chr5D 100.000 3697 0 0 1 3697 91357925 91354229 0.000000e+00 6828.0
1 TraesCS5D01G085900 chr5B 89.623 848 62 11 1031 1870 96558063 96557234 0.000000e+00 1055.0
2 TraesCS5D01G085900 chr5B 91.896 728 56 1 1348 2075 100711104 100711828 0.000000e+00 1014.0
3 TraesCS5D01G085900 chr5B 89.310 739 58 11 2670 3391 96554931 96554197 0.000000e+00 907.0
4 TraesCS5D01G085900 chr5B 86.073 876 73 26 468 1320 100710142 100710991 0.000000e+00 896.0
5 TraesCS5D01G085900 chr5B 92.727 550 34 5 2084 2633 100711864 100712407 0.000000e+00 789.0
6 TraesCS5D01G085900 chr5B 82.790 767 83 25 284 1035 96559767 96559035 1.120000e-179 640.0
7 TraesCS5D01G085900 chr5B 95.638 298 13 0 2336 2633 96555232 96554935 2.580000e-131 479.0
8 TraesCS5D01G085900 chr5B 92.481 266 16 1 2082 2343 96557023 96556758 9.690000e-101 377.0
9 TraesCS5D01G085900 chr5B 92.973 185 13 0 1891 2075 96557241 96557057 1.690000e-68 270.0
10 TraesCS5D01G085900 chr5B 96.296 162 6 0 3536 3697 96553320 96553159 2.190000e-67 267.0
11 TraesCS5D01G085900 chr5B 86.722 241 21 5 2669 2901 100712411 100712648 1.320000e-64 257.0
12 TraesCS5D01G085900 chr5B 90.667 150 3 5 3536 3685 100719116 100719254 4.870000e-44 189.0
13 TraesCS5D01G085900 chr5B 96.053 76 2 1 2967 3041 100712821 100712896 5.010000e-24 122.0
14 TraesCS5D01G085900 chr5B 90.110 91 5 2 3427 3517 100719038 100719124 8.390000e-22 115.0
15 TraesCS5D01G085900 chr5B 100.000 50 0 0 3305 3354 100718880 100718929 3.930000e-15 93.5
16 TraesCS5D01G085900 chr5A 92.214 411 31 1 2981 3391 85140020 85139611 6.880000e-162 580.0
17 TraesCS5D01G085900 chr5A 82.533 229 8 10 3411 3639 85139624 85139428 4.910000e-39 172.0
18 TraesCS5D01G085900 chr5A 100.000 32 0 0 3666 3697 85124219 85124188 3.990000e-05 60.2
19 TraesCS5D01G085900 chr1A 93.333 165 11 0 129 293 11112861 11113025 1.030000e-60 244.0
20 TraesCS5D01G085900 chr7D 82.838 303 19 18 14 286 346488722 346489021 1.330000e-59 241.0
21 TraesCS5D01G085900 chr7D 91.411 163 13 1 132 293 355881356 355881518 4.810000e-54 222.0
22 TraesCS5D01G085900 chr7D 92.537 134 8 2 14 146 334498308 334498440 1.360000e-44 191.0
23 TraesCS5D01G085900 chr7D 92.537 134 8 2 14 146 334538650 334538782 1.360000e-44 191.0
24 TraesCS5D01G085900 chr7D 100.000 30 0 0 677 706 7739866 7739837 5.160000e-04 56.5
25 TraesCS5D01G085900 chr1D 93.711 159 6 4 125 280 340327373 340327216 6.170000e-58 235.0
26 TraesCS5D01G085900 chr1D 94.531 128 7 0 19 146 340327537 340327410 8.100000e-47 198.0
27 TraesCS5D01G085900 chr2B 92.025 163 12 1 132 293 113617987 113617825 1.030000e-55 228.0
28 TraesCS5D01G085900 chr2B 92.500 160 11 1 134 292 473516687 473516528 1.030000e-55 228.0
29 TraesCS5D01G085900 chr2B 95.489 133 6 0 14 146 509252638 509252506 2.890000e-51 213.0
30 TraesCS5D01G085900 chr6D 91.411 163 13 1 132 293 323428808 323428970 4.810000e-54 222.0
31 TraesCS5D01G085900 chr6D 92.537 134 9 1 14 146 161834454 161834587 1.360000e-44 191.0
32 TraesCS5D01G085900 chr3D 91.411 163 13 1 132 293 10840852 10840690 4.810000e-54 222.0
33 TraesCS5D01G085900 chr3D 93.233 133 9 0 14 146 321801559 321801691 2.910000e-46 196.0
34 TraesCS5D01G085900 chr3D 88.235 68 8 0 2247 2314 383110653 383110586 8.510000e-12 82.4
35 TraesCS5D01G085900 chr4B 90.854 164 12 3 132 293 557575663 557575501 2.240000e-52 217.0
36 TraesCS5D01G085900 chr3B 90.798 163 14 1 132 293 702061109 702060947 2.240000e-52 217.0
37 TraesCS5D01G085900 chr3B 93.233 133 9 0 14 146 734119791 734119923 2.910000e-46 196.0
38 TraesCS5D01G085900 chr7A 93.233 133 9 0 14 146 267271017 267270885 2.910000e-46 196.0
39 TraesCS5D01G085900 chr7B 100.000 35 0 0 2925 2959 603319180 603319146 8.570000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G085900 chr5D 91354229 91357925 3696 True 6828.000000 6828 100.000000 1 3697 1 chr5D.!!$R1 3696
1 TraesCS5D01G085900 chr5B 100710142 100712896 2754 False 615.600000 1014 90.694200 468 3041 5 chr5B.!!$F1 2573
2 TraesCS5D01G085900 chr5B 96553159 96559767 6608 True 570.714286 1055 91.301571 284 3697 7 chr5B.!!$R1 3413
3 TraesCS5D01G085900 chr5A 85139428 85140020 592 True 376.000000 580 87.373500 2981 3639 2 chr5A.!!$R2 658

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
177 178 0.035458 GGAGGTGAGTCACTTGGGTG 59.965 60.0 22.18 0.0 44.23 4.61 F
906 922 0.107831 TTTTGTGTCCCACCTCCTCG 59.892 55.0 0.00 0.0 32.73 4.63 F
1421 2524 0.163788 CGTGACGCTTGTGGTGATTC 59.836 55.0 0.00 0.0 0.00 2.52 F
2565 5232 0.250727 TGGAAAGGGTTCTCAAGCGG 60.251 55.0 0.00 0.0 33.92 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1611 2714 0.107703 TACCTTGCCCTGCTTCATCG 60.108 55.00 0.0 0.0 0.00 3.84 R
2641 5308 0.034059 CGTGGAGTGGGATATGCTCC 59.966 60.00 0.0 0.0 46.61 4.70 R
2642 5309 0.034059 CCGTGGAGTGGGATATGCTC 59.966 60.00 0.0 0.0 0.00 4.26 R
3393 6188 4.787551 TGCACTTCCTCCTTTTCTAAACA 58.212 39.13 0.0 0.0 0.00 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 4.678743 GGGGGTGTGCCAAGGTCC 62.679 72.222 0.00 0.00 36.17 4.46
47 48 3.897122 GGGGTGTGCCAAGGTCCA 61.897 66.667 0.00 0.00 36.17 4.02
48 49 2.197324 GGGTGTGCCAAGGTCCAA 59.803 61.111 0.00 0.00 36.17 3.53
49 50 1.456705 GGGTGTGCCAAGGTCCAAA 60.457 57.895 0.00 0.00 36.17 3.28
50 51 1.463553 GGGTGTGCCAAGGTCCAAAG 61.464 60.000 0.00 0.00 36.17 2.77
51 52 0.467290 GGTGTGCCAAGGTCCAAAGA 60.467 55.000 0.00 0.00 34.09 2.52
52 53 1.398692 GTGTGCCAAGGTCCAAAGAA 58.601 50.000 0.00 0.00 0.00 2.52
53 54 1.963515 GTGTGCCAAGGTCCAAAGAAT 59.036 47.619 0.00 0.00 0.00 2.40
54 55 3.153919 GTGTGCCAAGGTCCAAAGAATA 58.846 45.455 0.00 0.00 0.00 1.75
55 56 3.763897 GTGTGCCAAGGTCCAAAGAATAT 59.236 43.478 0.00 0.00 0.00 1.28
56 57 4.220602 GTGTGCCAAGGTCCAAAGAATATT 59.779 41.667 0.00 0.00 0.00 1.28
57 58 4.462483 TGTGCCAAGGTCCAAAGAATATTC 59.538 41.667 7.41 7.41 0.00 1.75
58 59 4.462483 GTGCCAAGGTCCAAAGAATATTCA 59.538 41.667 17.56 0.00 0.00 2.57
59 60 5.127682 GTGCCAAGGTCCAAAGAATATTCAT 59.872 40.000 17.56 2.52 0.00 2.57
60 61 5.360714 TGCCAAGGTCCAAAGAATATTCATC 59.639 40.000 17.56 0.00 0.00 2.92
61 62 5.360714 GCCAAGGTCCAAAGAATATTCATCA 59.639 40.000 17.56 0.00 0.00 3.07
62 63 6.127366 GCCAAGGTCCAAAGAATATTCATCAA 60.127 38.462 17.56 0.00 0.00 2.57
63 64 7.418254 GCCAAGGTCCAAAGAATATTCATCAAT 60.418 37.037 17.56 0.00 0.00 2.57
64 65 8.480501 CCAAGGTCCAAAGAATATTCATCAATT 58.519 33.333 17.56 0.00 0.00 2.32
65 66 9.880157 CAAGGTCCAAAGAATATTCATCAATTT 57.120 29.630 17.56 6.08 0.00 1.82
81 82 8.821147 TCATCAATTTTCTCAGATTTTTGTGG 57.179 30.769 0.00 0.00 0.00 4.17
82 83 7.874016 TCATCAATTTTCTCAGATTTTTGTGGG 59.126 33.333 0.00 0.00 0.00 4.61
83 84 5.990996 TCAATTTTCTCAGATTTTTGTGGGC 59.009 36.000 0.00 0.00 0.00 5.36
84 85 5.549742 ATTTTCTCAGATTTTTGTGGGCA 57.450 34.783 0.00 0.00 0.00 5.36
85 86 5.350504 TTTTCTCAGATTTTTGTGGGCAA 57.649 34.783 0.00 0.00 0.00 4.52
86 87 4.589216 TTCTCAGATTTTTGTGGGCAAG 57.411 40.909 0.00 0.00 35.82 4.01
87 88 3.831323 TCTCAGATTTTTGTGGGCAAGA 58.169 40.909 0.00 0.00 35.82 3.02
88 89 4.214310 TCTCAGATTTTTGTGGGCAAGAA 58.786 39.130 0.00 0.00 35.82 2.52
89 90 4.648762 TCTCAGATTTTTGTGGGCAAGAAA 59.351 37.500 0.00 0.00 33.36 2.52
90 91 5.128499 TCTCAGATTTTTGTGGGCAAGAAAA 59.872 36.000 0.00 0.00 33.36 2.29
91 92 5.738909 TCAGATTTTTGTGGGCAAGAAAAA 58.261 33.333 11.57 11.57 33.36 1.94
92 93 6.355747 TCAGATTTTTGTGGGCAAGAAAAAT 58.644 32.000 19.15 19.15 40.35 1.82
93 94 6.260493 TCAGATTTTTGTGGGCAAGAAAAATG 59.740 34.615 22.80 13.52 38.68 2.32
94 95 6.260493 CAGATTTTTGTGGGCAAGAAAAATGA 59.740 34.615 22.80 0.00 38.68 2.57
95 96 6.484308 AGATTTTTGTGGGCAAGAAAAATGAG 59.516 34.615 22.80 0.00 38.68 2.90
96 97 3.749665 TTGTGGGCAAGAAAAATGAGG 57.250 42.857 0.00 0.00 0.00 3.86
97 98 1.969923 TGTGGGCAAGAAAAATGAGGG 59.030 47.619 0.00 0.00 0.00 4.30
98 99 1.970640 GTGGGCAAGAAAAATGAGGGT 59.029 47.619 0.00 0.00 0.00 4.34
99 100 2.368548 GTGGGCAAGAAAAATGAGGGTT 59.631 45.455 0.00 0.00 0.00 4.11
100 101 2.368221 TGGGCAAGAAAAATGAGGGTTG 59.632 45.455 0.00 0.00 0.00 3.77
101 102 2.416747 GGCAAGAAAAATGAGGGTTGC 58.583 47.619 0.00 0.00 39.63 4.17
102 103 2.037641 GGCAAGAAAAATGAGGGTTGCT 59.962 45.455 4.99 0.00 40.11 3.91
103 104 3.494924 GGCAAGAAAAATGAGGGTTGCTT 60.495 43.478 4.99 0.00 40.11 3.91
104 105 4.129380 GCAAGAAAAATGAGGGTTGCTTT 58.871 39.130 0.00 0.00 37.80 3.51
105 106 4.024641 GCAAGAAAAATGAGGGTTGCTTTG 60.025 41.667 0.00 0.00 37.80 2.77
106 107 4.341366 AGAAAAATGAGGGTTGCTTTGG 57.659 40.909 0.00 0.00 0.00 3.28
107 108 3.966665 AGAAAAATGAGGGTTGCTTTGGA 59.033 39.130 0.00 0.00 0.00 3.53
108 109 4.039609 AGAAAAATGAGGGTTGCTTTGGAG 59.960 41.667 0.00 0.00 0.00 3.86
121 122 2.564771 CTTTGGAGCACAAGTGACTGA 58.435 47.619 4.04 0.00 40.82 3.41
122 123 2.708216 TTGGAGCACAAGTGACTGAA 57.292 45.000 4.04 0.00 33.18 3.02
123 124 2.245159 TGGAGCACAAGTGACTGAAG 57.755 50.000 4.04 0.00 0.00 3.02
124 125 1.486310 TGGAGCACAAGTGACTGAAGT 59.514 47.619 4.04 0.00 0.00 3.01
125 126 1.869767 GGAGCACAAGTGACTGAAGTG 59.130 52.381 4.04 8.23 0.00 3.16
126 127 2.555199 GAGCACAAGTGACTGAAGTGT 58.445 47.619 4.04 0.00 32.99 3.55
127 128 2.283298 AGCACAAGTGACTGAAGTGTG 58.717 47.619 10.04 10.04 41.96 3.82
128 129 2.093500 AGCACAAGTGACTGAAGTGTGA 60.093 45.455 16.80 0.00 41.67 3.58
129 130 2.874701 GCACAAGTGACTGAAGTGTGAT 59.125 45.455 16.80 0.00 41.67 3.06
130 131 3.313526 GCACAAGTGACTGAAGTGTGATT 59.686 43.478 16.80 0.00 41.67 2.57
131 132 4.201950 GCACAAGTGACTGAAGTGTGATTT 60.202 41.667 16.80 0.00 41.67 2.17
132 133 5.505286 CACAAGTGACTGAAGTGTGATTTC 58.495 41.667 8.99 0.00 41.67 2.17
133 134 5.065090 CACAAGTGACTGAAGTGTGATTTCA 59.935 40.000 8.99 0.00 41.67 2.69
141 142 5.551305 TGAAGTGTGATTTCAGAGAGGAA 57.449 39.130 0.00 0.00 31.35 3.36
142 143 5.928976 TGAAGTGTGATTTCAGAGAGGAAA 58.071 37.500 0.00 0.00 40.72 3.13
144 145 6.429078 TGAAGTGTGATTTCAGAGAGGAAATG 59.571 38.462 5.92 0.00 45.05 2.32
145 146 6.119240 AGTGTGATTTCAGAGAGGAAATGA 57.881 37.500 5.92 0.00 45.05 2.57
146 147 6.719301 AGTGTGATTTCAGAGAGGAAATGAT 58.281 36.000 5.92 0.00 45.05 2.45
147 148 6.598457 AGTGTGATTTCAGAGAGGAAATGATG 59.402 38.462 5.92 0.00 45.05 3.07
148 149 6.373774 GTGTGATTTCAGAGAGGAAATGATGT 59.626 38.462 5.92 0.00 45.05 3.06
149 150 6.373495 TGTGATTTCAGAGAGGAAATGATGTG 59.627 38.462 5.92 0.00 45.05 3.21
150 151 6.373774 GTGATTTCAGAGAGGAAATGATGTGT 59.626 38.462 5.92 0.00 45.05 3.72
151 152 6.944290 TGATTTCAGAGAGGAAATGATGTGTT 59.056 34.615 5.92 0.00 45.05 3.32
152 153 7.449395 TGATTTCAGAGAGGAAATGATGTGTTT 59.551 33.333 5.92 0.00 45.05 2.83
153 154 6.564709 TTCAGAGAGGAAATGATGTGTTTG 57.435 37.500 0.00 0.00 0.00 2.93
154 155 5.868454 TCAGAGAGGAAATGATGTGTTTGA 58.132 37.500 0.00 0.00 0.00 2.69
155 156 5.936372 TCAGAGAGGAAATGATGTGTTTGAG 59.064 40.000 0.00 0.00 0.00 3.02
156 157 5.936372 CAGAGAGGAAATGATGTGTTTGAGA 59.064 40.000 0.00 0.00 0.00 3.27
157 158 6.092396 CAGAGAGGAAATGATGTGTTTGAGAG 59.908 42.308 0.00 0.00 0.00 3.20
158 159 5.251764 AGAGGAAATGATGTGTTTGAGAGG 58.748 41.667 0.00 0.00 0.00 3.69
159 160 4.338879 AGGAAATGATGTGTTTGAGAGGG 58.661 43.478 0.00 0.00 0.00 4.30
160 161 4.043310 AGGAAATGATGTGTTTGAGAGGGA 59.957 41.667 0.00 0.00 0.00 4.20
161 162 4.397417 GGAAATGATGTGTTTGAGAGGGAG 59.603 45.833 0.00 0.00 0.00 4.30
162 163 3.641434 ATGATGTGTTTGAGAGGGAGG 57.359 47.619 0.00 0.00 0.00 4.30
163 164 2.338809 TGATGTGTTTGAGAGGGAGGT 58.661 47.619 0.00 0.00 0.00 3.85
164 165 2.038952 TGATGTGTTTGAGAGGGAGGTG 59.961 50.000 0.00 0.00 0.00 4.00
165 166 1.801242 TGTGTTTGAGAGGGAGGTGA 58.199 50.000 0.00 0.00 0.00 4.02
166 167 1.694150 TGTGTTTGAGAGGGAGGTGAG 59.306 52.381 0.00 0.00 0.00 3.51
167 168 1.694696 GTGTTTGAGAGGGAGGTGAGT 59.305 52.381 0.00 0.00 0.00 3.41
168 169 1.971357 TGTTTGAGAGGGAGGTGAGTC 59.029 52.381 0.00 0.00 0.00 3.36
169 170 1.971357 GTTTGAGAGGGAGGTGAGTCA 59.029 52.381 0.00 0.00 0.00 3.41
170 171 1.633774 TTGAGAGGGAGGTGAGTCAC 58.366 55.000 15.24 15.24 0.00 3.67
171 172 0.780637 TGAGAGGGAGGTGAGTCACT 59.219 55.000 22.18 8.90 34.40 3.41
172 173 1.148027 TGAGAGGGAGGTGAGTCACTT 59.852 52.381 22.18 15.71 34.40 3.16
173 174 1.548269 GAGAGGGAGGTGAGTCACTTG 59.452 57.143 22.18 0.00 34.40 3.16
174 175 0.610687 GAGGGAGGTGAGTCACTTGG 59.389 60.000 22.18 0.00 34.40 3.61
175 176 0.838122 AGGGAGGTGAGTCACTTGGG 60.838 60.000 22.18 0.00 34.40 4.12
176 177 1.128188 GGGAGGTGAGTCACTTGGGT 61.128 60.000 22.18 3.14 34.40 4.51
177 178 0.035458 GGAGGTGAGTCACTTGGGTG 59.965 60.000 22.18 0.00 44.23 4.61
189 190 4.935352 CACTTGGGTGAAAATCAAGGAA 57.065 40.909 0.00 0.00 45.61 3.36
190 191 5.275067 CACTTGGGTGAAAATCAAGGAAA 57.725 39.130 0.00 0.00 45.61 3.13
191 192 5.857268 CACTTGGGTGAAAATCAAGGAAAT 58.143 37.500 0.00 0.00 45.61 2.17
192 193 5.697633 CACTTGGGTGAAAATCAAGGAAATG 59.302 40.000 0.00 0.00 45.61 2.32
193 194 4.270245 TGGGTGAAAATCAAGGAAATGC 57.730 40.909 0.00 0.00 0.00 3.56
194 195 3.007831 TGGGTGAAAATCAAGGAAATGCC 59.992 43.478 0.00 0.00 0.00 4.40
195 196 3.599343 GGTGAAAATCAAGGAAATGCCC 58.401 45.455 0.00 0.00 37.37 5.36
196 197 3.007831 GGTGAAAATCAAGGAAATGCCCA 59.992 43.478 0.00 0.00 37.37 5.36
197 198 4.504689 GGTGAAAATCAAGGAAATGCCCAA 60.505 41.667 0.00 0.00 37.37 4.12
198 199 4.692155 GTGAAAATCAAGGAAATGCCCAAG 59.308 41.667 0.00 0.00 37.37 3.61
199 200 4.347583 TGAAAATCAAGGAAATGCCCAAGT 59.652 37.500 0.00 0.00 37.37 3.16
200 201 3.967332 AATCAAGGAAATGCCCAAGTG 57.033 42.857 0.00 0.00 37.37 3.16
201 202 1.631405 TCAAGGAAATGCCCAAGTGG 58.369 50.000 0.00 0.00 37.37 4.00
202 203 1.133199 TCAAGGAAATGCCCAAGTGGT 60.133 47.619 0.00 0.00 37.37 4.16
203 204 1.693606 CAAGGAAATGCCCAAGTGGTT 59.306 47.619 0.00 0.00 37.37 3.67
204 205 2.896685 CAAGGAAATGCCCAAGTGGTTA 59.103 45.455 0.00 0.00 37.37 2.85
205 206 3.252554 AGGAAATGCCCAAGTGGTTAA 57.747 42.857 0.00 0.00 37.37 2.01
206 207 3.165071 AGGAAATGCCCAAGTGGTTAAG 58.835 45.455 0.00 0.00 37.37 1.85
207 208 2.897326 GGAAATGCCCAAGTGGTTAAGT 59.103 45.455 0.00 0.00 36.04 2.24
208 209 3.056821 GGAAATGCCCAAGTGGTTAAGTC 60.057 47.826 0.00 0.00 36.04 3.01
209 210 3.525800 AATGCCCAAGTGGTTAAGTCT 57.474 42.857 0.00 0.00 36.04 3.24
210 211 4.650972 AATGCCCAAGTGGTTAAGTCTA 57.349 40.909 0.00 0.00 36.04 2.59
211 212 4.650972 ATGCCCAAGTGGTTAAGTCTAA 57.349 40.909 0.00 0.00 36.04 2.10
212 213 3.746940 TGCCCAAGTGGTTAAGTCTAAC 58.253 45.455 0.00 0.00 37.30 2.34
213 214 3.393278 TGCCCAAGTGGTTAAGTCTAACT 59.607 43.478 0.00 0.00 38.01 2.24
214 215 3.751698 GCCCAAGTGGTTAAGTCTAACTG 59.248 47.826 0.00 0.00 38.01 3.16
215 216 4.504340 GCCCAAGTGGTTAAGTCTAACTGA 60.504 45.833 0.00 0.00 38.01 3.41
216 217 5.238583 CCCAAGTGGTTAAGTCTAACTGAG 58.761 45.833 0.00 0.00 38.01 3.35
217 218 5.221661 CCCAAGTGGTTAAGTCTAACTGAGT 60.222 44.000 0.00 0.00 38.01 3.41
218 219 6.289064 CCAAGTGGTTAAGTCTAACTGAGTT 58.711 40.000 2.37 2.37 40.98 3.01
219 220 6.202954 CCAAGTGGTTAAGTCTAACTGAGTTG 59.797 42.308 8.33 0.00 38.65 3.16
220 221 6.726490 AGTGGTTAAGTCTAACTGAGTTGA 57.274 37.500 8.33 0.82 38.65 3.18
221 222 7.304497 AGTGGTTAAGTCTAACTGAGTTGAT 57.696 36.000 8.33 0.00 38.65 2.57
222 223 7.736893 AGTGGTTAAGTCTAACTGAGTTGATT 58.263 34.615 8.33 0.29 38.65 2.57
223 224 7.873505 AGTGGTTAAGTCTAACTGAGTTGATTC 59.126 37.037 8.33 0.00 38.65 2.52
224 225 7.656137 GTGGTTAAGTCTAACTGAGTTGATTCA 59.344 37.037 8.33 0.00 38.65 2.57
225 226 8.208224 TGGTTAAGTCTAACTGAGTTGATTCAA 58.792 33.333 8.33 0.00 38.65 2.69
226 227 9.052759 GGTTAAGTCTAACTGAGTTGATTCAAA 57.947 33.333 8.33 0.00 38.65 2.69
229 230 8.738645 AAGTCTAACTGAGTTGATTCAAAACT 57.261 30.769 8.33 0.00 40.54 2.66
239 240 8.647143 GAGTTGATTCAAAACTCCAAATTCAA 57.353 30.769 0.00 0.00 45.10 2.69
240 241 9.097257 GAGTTGATTCAAAACTCCAAATTCAAA 57.903 29.630 0.00 0.00 45.10 2.69
241 242 8.882736 AGTTGATTCAAAACTCCAAATTCAAAC 58.117 29.630 0.00 0.00 32.36 2.93
242 243 8.663911 GTTGATTCAAAACTCCAAATTCAAACA 58.336 29.630 0.00 0.00 0.00 2.83
243 244 8.783833 TGATTCAAAACTCCAAATTCAAACAA 57.216 26.923 0.00 0.00 0.00 2.83
244 245 9.224267 TGATTCAAAACTCCAAATTCAAACAAA 57.776 25.926 0.00 0.00 0.00 2.83
247 248 9.890352 TTCAAAACTCCAAATTCAAACAAAAAG 57.110 25.926 0.00 0.00 0.00 2.27
248 249 8.510505 TCAAAACTCCAAATTCAAACAAAAAGG 58.489 29.630 0.00 0.00 0.00 3.11
249 250 8.510505 CAAAACTCCAAATTCAAACAAAAAGGA 58.489 29.630 0.00 0.00 0.00 3.36
250 251 8.628630 AAACTCCAAATTCAAACAAAAAGGAA 57.371 26.923 0.00 0.00 0.00 3.36
251 252 8.628630 AACTCCAAATTCAAACAAAAAGGAAA 57.371 26.923 0.00 0.00 0.00 3.13
252 253 8.628630 ACTCCAAATTCAAACAAAAAGGAAAA 57.371 26.923 0.00 0.00 0.00 2.29
253 254 9.072375 ACTCCAAATTCAAACAAAAAGGAAAAA 57.928 25.926 0.00 0.00 0.00 1.94
282 283 9.366216 TCTAGAAAAAGAAAAAGAGCAAAAACC 57.634 29.630 0.00 0.00 0.00 3.27
283 284 7.977789 AGAAAAAGAAAAAGAGCAAAAACCA 57.022 28.000 0.00 0.00 0.00 3.67
284 285 8.032952 AGAAAAAGAAAAAGAGCAAAAACCAG 57.967 30.769 0.00 0.00 0.00 4.00
285 286 6.741992 AAAAGAAAAAGAGCAAAAACCAGG 57.258 33.333 0.00 0.00 0.00 4.45
286 287 5.675684 AAGAAAAAGAGCAAAAACCAGGA 57.324 34.783 0.00 0.00 0.00 3.86
287 288 5.876651 AGAAAAAGAGCAAAAACCAGGAT 57.123 34.783 0.00 0.00 0.00 3.24
288 289 5.604565 AGAAAAAGAGCAAAAACCAGGATG 58.395 37.500 0.00 0.00 0.00 3.51
289 290 5.129320 AGAAAAAGAGCAAAAACCAGGATGT 59.871 36.000 0.00 0.00 0.00 3.06
290 291 4.590850 AAAGAGCAAAAACCAGGATGTC 57.409 40.909 0.00 0.00 0.00 3.06
291 292 3.228188 AGAGCAAAAACCAGGATGTCA 57.772 42.857 0.00 0.00 0.00 3.58
292 293 2.887152 AGAGCAAAAACCAGGATGTCAC 59.113 45.455 0.00 0.00 0.00 3.67
297 298 2.879103 AAACCAGGATGTCACGGATT 57.121 45.000 0.00 0.00 0.00 3.01
300 301 0.179045 CCAGGATGTCACGGATTCCC 60.179 60.000 0.00 0.00 0.00 3.97
314 315 3.853698 TTCCCGAAGCCAAACCCCG 62.854 63.158 0.00 0.00 0.00 5.73
324 326 3.239253 AAACCCCGCTCGGACAGT 61.239 61.111 10.28 1.52 37.50 3.55
336 338 2.640302 GGACAGTCGCAGCCTCTCA 61.640 63.158 0.00 0.00 0.00 3.27
337 339 1.290324 GACAGTCGCAGCCTCTCAA 59.710 57.895 0.00 0.00 0.00 3.02
339 341 0.320247 ACAGTCGCAGCCTCTCAAAG 60.320 55.000 0.00 0.00 0.00 2.77
351 353 3.415457 CTCTCAAAGGAAGCAAGGTCT 57.585 47.619 0.00 0.00 0.00 3.85
358 360 0.620700 GGAAGCAAGGTCTAGGGGGA 60.621 60.000 0.00 0.00 0.00 4.81
381 383 0.529833 CATGGCGCATGGGTTTTGTA 59.470 50.000 10.83 0.00 38.11 2.41
383 385 0.529833 TGGCGCATGGGTTTTGTATG 59.470 50.000 10.83 0.00 0.00 2.39
389 391 3.634448 CGCATGGGTTTTGTATGGGATTA 59.366 43.478 0.68 0.00 37.04 1.75
405 407 1.141053 GATTAAGGGACGGTGGATGCT 59.859 52.381 0.00 0.00 0.00 3.79
426 428 2.361230 GCCAAGTGGTAGGGGCAC 60.361 66.667 0.00 0.00 45.70 5.01
427 429 3.938637 GCCAAGTGGTAGGGGCACC 62.939 68.421 0.00 0.00 45.70 5.01
488 490 1.248486 GCTCCTTGTTTTGGGAGGTC 58.752 55.000 10.44 0.00 46.58 3.85
500 502 2.601868 GAGGTCGGGAGGCTAGGA 59.398 66.667 0.00 0.00 32.81 2.94
541 543 6.695292 AGAAACTTAATTTGCGCAATCTTG 57.305 33.333 25.64 15.16 0.00 3.02
542 544 6.446318 AGAAACTTAATTTGCGCAATCTTGA 58.554 32.000 25.64 15.55 0.00 3.02
552 555 2.263077 CGCAATCTTGACGAGCTTACT 58.737 47.619 0.00 0.00 32.28 2.24
557 560 5.577164 GCAATCTTGACGAGCTTACTCTTAA 59.423 40.000 0.00 0.00 41.09 1.85
573 576 9.831737 CTTACTCTTAAACCAAAATGAGATGTG 57.168 33.333 0.00 0.00 0.00 3.21
591 594 9.123902 TGAGATGTGATTTTATTACATTCCTGG 57.876 33.333 0.00 0.00 39.27 4.45
607 610 5.621197 TTCCTGGTGTGTTTTTATCGATG 57.379 39.130 8.54 0.00 0.00 3.84
610 613 4.454161 CCTGGTGTGTTTTTATCGATGACA 59.546 41.667 8.54 5.01 0.00 3.58
707 710 0.830866 TGCCCCATTGCAACACATGA 60.831 50.000 0.00 0.00 38.56 3.07
708 711 0.321021 GCCCCATTGCAACACATGAA 59.679 50.000 0.00 0.00 0.00 2.57
709 712 1.065998 GCCCCATTGCAACACATGAAT 60.066 47.619 0.00 0.00 0.00 2.57
713 716 4.099727 CCCCATTGCAACACATGAATGATA 59.900 41.667 0.00 0.00 32.72 2.15
715 718 5.521010 CCCATTGCAACACATGAATGATAAC 59.479 40.000 0.00 0.00 32.72 1.89
736 739 4.543689 ACCTGATCGGATTAGTGGTAGAA 58.456 43.478 2.08 0.00 36.31 2.10
761 764 5.661458 CTGAGTCTTCGCCCTCTTTTAATA 58.339 41.667 0.00 0.00 0.00 0.98
818 821 2.047274 CTTGCCCCGAGAAGCGAA 60.047 61.111 0.00 0.00 44.57 4.70
820 823 3.171828 TTGCCCCGAGAAGCGAACA 62.172 57.895 0.00 0.00 44.57 3.18
846 849 5.011125 TCGAGGGAAGATTGATCTTATCACC 59.989 44.000 6.24 7.04 46.47 4.02
847 850 5.221521 CGAGGGAAGATTGATCTTATCACCA 60.222 44.000 6.24 0.00 46.47 4.17
888 901 5.098663 TCTTATCACCTGGTTAACCTCCTT 58.901 41.667 24.78 8.12 36.82 3.36
903 919 0.476771 TCCTTTTGTGTCCCACCTCC 59.523 55.000 0.00 0.00 32.73 4.30
906 922 0.107831 TTTTGTGTCCCACCTCCTCG 59.892 55.000 0.00 0.00 32.73 4.63
907 923 1.052124 TTTGTGTCCCACCTCCTCGT 61.052 55.000 0.00 0.00 32.73 4.18
908 924 1.469335 TTGTGTCCCACCTCCTCGTC 61.469 60.000 0.00 0.00 32.73 4.20
909 925 1.606889 GTGTCCCACCTCCTCGTCT 60.607 63.158 0.00 0.00 0.00 4.18
910 926 1.304217 TGTCCCACCTCCTCGTCTC 60.304 63.158 0.00 0.00 0.00 3.36
911 927 1.000646 GTCCCACCTCCTCGTCTCT 60.001 63.158 0.00 0.00 0.00 3.10
912 928 0.612453 GTCCCACCTCCTCGTCTCTT 60.612 60.000 0.00 0.00 0.00 2.85
913 929 0.323542 TCCCACCTCCTCGTCTCTTC 60.324 60.000 0.00 0.00 0.00 2.87
914 930 1.324005 CCCACCTCCTCGTCTCTTCC 61.324 65.000 0.00 0.00 0.00 3.46
915 931 0.323908 CCACCTCCTCGTCTCTTCCT 60.324 60.000 0.00 0.00 0.00 3.36
916 932 1.064611 CCACCTCCTCGTCTCTTCCTA 60.065 57.143 0.00 0.00 0.00 2.94
917 933 2.620886 CCACCTCCTCGTCTCTTCCTAA 60.621 54.545 0.00 0.00 0.00 2.69
918 934 2.685897 CACCTCCTCGTCTCTTCCTAAG 59.314 54.545 0.00 0.00 0.00 2.18
921 937 2.955660 CTCCTCGTCTCTTCCTAAGCAT 59.044 50.000 0.00 0.00 0.00 3.79
928 944 2.101582 TCTCTTCCTAAGCATTCCTCGC 59.898 50.000 0.00 0.00 0.00 5.03
932 948 0.755686 CCTAAGCATTCCTCGCCTCT 59.244 55.000 0.00 0.00 0.00 3.69
940 956 3.144193 CCTCGCCTCTTCCTCGCT 61.144 66.667 0.00 0.00 0.00 4.93
968 995 3.118454 CGTCCGTGGCTTCGCATT 61.118 61.111 0.00 0.00 0.00 3.56
972 999 4.481112 CGTGGCTTCGCATTGGCC 62.481 66.667 0.00 0.00 45.45 5.36
1027 1054 1.208614 GTACGTCCGTCGAAGCTGT 59.791 57.895 0.00 0.00 42.86 4.40
1044 2047 4.873010 AGCTGTCTCTAAGTATCTCCCAA 58.127 43.478 0.00 0.00 0.00 4.12
1056 2059 0.181114 TCTCCCAATCCGCCAATCAG 59.819 55.000 0.00 0.00 0.00 2.90
1062 2065 2.223641 CCAATCCGCCAATCAGTTCATG 60.224 50.000 0.00 0.00 0.00 3.07
1143 2149 2.581409 CGGCGCCCAAGTACGTAG 60.581 66.667 23.46 0.00 0.00 3.51
1200 2208 3.577415 AGCTGGTAGTTCGTCCTACTTTT 59.423 43.478 11.93 0.00 37.92 2.27
1270 2285 7.546778 TTTCTGAAGTAAATTGCCAAAAACC 57.453 32.000 0.00 0.00 0.00 3.27
1272 2287 6.825610 TCTGAAGTAAATTGCCAAAAACCAT 58.174 32.000 0.00 0.00 0.00 3.55
1277 2292 5.990996 AGTAAATTGCCAAAAACCATCACAG 59.009 36.000 0.00 0.00 0.00 3.66
1312 2330 5.062058 GTCATTAAACACCCATCAAAATGCG 59.938 40.000 0.00 0.00 0.00 4.73
1409 2512 1.966493 AATTCGACATGCCGTGACGC 61.966 55.000 0.00 0.00 43.88 5.19
1410 2513 2.835701 ATTCGACATGCCGTGACGCT 62.836 55.000 0.00 0.00 43.88 5.07
1421 2524 0.163788 CGTGACGCTTGTGGTGATTC 59.836 55.000 0.00 0.00 0.00 2.52
1425 2528 2.224281 TGACGCTTGTGGTGATTCTCTT 60.224 45.455 0.00 0.00 0.00 2.85
1431 2534 4.776743 CTTGTGGTGATTCTCTTTTCGTG 58.223 43.478 0.00 0.00 0.00 4.35
1446 2549 1.186200 TCGTGTAGATGCTGGCTTCT 58.814 50.000 13.89 13.89 35.18 2.85
1460 2563 2.511218 TGGCTTCTTCCCTTCTGCATAT 59.489 45.455 0.00 0.00 0.00 1.78
1462 2565 3.549794 GCTTCTTCCCTTCTGCATATGT 58.450 45.455 4.29 0.00 0.00 2.29
1463 2566 3.563390 GCTTCTTCCCTTCTGCATATGTC 59.437 47.826 4.29 0.00 0.00 3.06
1472 2575 1.904852 CTGCATATGTCGCCGCCATC 61.905 60.000 4.29 0.00 0.00 3.51
1487 2590 1.220529 CCATCGATGATGAACCACGG 58.779 55.000 26.86 1.61 42.09 4.94
1489 2592 0.532862 ATCGATGATGAACCACGGCC 60.533 55.000 0.00 0.00 0.00 6.13
1516 2619 1.377994 CTGGCCAGCTTCTTCACCT 59.622 57.895 22.33 0.00 0.00 4.00
1524 2627 0.673644 GCTTCTTCACCTTGGCGCTA 60.674 55.000 7.64 0.00 0.00 4.26
1645 2748 4.508662 GCAAGGTATACAAGAGCAAGACT 58.491 43.478 5.01 0.00 0.00 3.24
1750 2853 0.747283 GCTGCTGGAGGTCAATCTGG 60.747 60.000 0.00 0.00 0.00 3.86
1773 2876 1.740296 CGGCCTCCGTCACGAAAAT 60.740 57.895 0.00 0.00 42.73 1.82
1792 2895 6.142480 CGAAAATATCATCACACTCGTACCTC 59.858 42.308 0.00 0.00 0.00 3.85
2010 3113 3.494626 ACAACATCAACTCTAGCAACGTG 59.505 43.478 0.00 0.00 0.00 4.49
2024 3127 1.022451 AACGTGTTGCTTGACCGTGT 61.022 50.000 0.00 0.00 30.63 4.49
2052 3155 1.644786 CCAAGATCACGGGTTTCGGC 61.645 60.000 0.00 0.00 44.45 5.54
2075 3178 2.234143 TGCCCAAACGATCAACATTGA 58.766 42.857 0.00 0.00 42.14 2.57
2076 3179 2.228582 TGCCCAAACGATCAACATTGAG 59.771 45.455 0.23 0.00 41.08 3.02
2077 3180 2.228822 GCCCAAACGATCAACATTGAGT 59.771 45.455 0.23 0.00 41.08 3.41
2080 3210 3.186409 CCAAACGATCAACATTGAGTCGT 59.814 43.478 18.17 18.17 44.79 4.34
2085 3215 2.785713 TCAACATTGAGTCGTCGACA 57.214 45.000 26.17 7.25 34.60 4.35
2103 3233 3.007635 GACATTTCAACCTCTTACCGGG 58.992 50.000 6.32 0.00 0.00 5.73
2109 3239 2.301009 TCAACCTCTTACCGGGAACTTC 59.699 50.000 6.32 0.00 0.00 3.01
2152 3282 0.684535 TGTGATCCCGTCAAGCAAGA 59.315 50.000 0.00 0.00 38.90 3.02
2154 3284 2.151202 GTGATCCCGTCAAGCAAGAAA 58.849 47.619 0.00 0.00 38.90 2.52
2178 3308 8.455903 AACAATGCATAACATATTCTGCTAGT 57.544 30.769 0.00 0.00 38.34 2.57
2179 3309 7.868775 ACAATGCATAACATATTCTGCTAGTG 58.131 34.615 0.00 0.00 38.34 2.74
2200 3334 5.701290 AGTGTATGACTTCAGTTGCTTAACC 59.299 40.000 0.00 0.00 0.00 2.85
2216 3350 8.565416 GTTGCTTAACCAATTAAGTCTACTTGT 58.435 33.333 5.62 0.00 46.24 3.16
2274 3408 1.860676 TGGTTGACGTGTACAGCTTC 58.139 50.000 0.00 0.00 0.00 3.86
2330 3464 1.632422 GCCGTTGAATTTGCCATCAG 58.368 50.000 0.00 0.00 0.00 2.90
2435 5102 0.324285 AGAGGAGGTTTCAGCAGCAG 59.676 55.000 0.00 0.00 0.00 4.24
2436 5103 1.303155 AGGAGGTTTCAGCAGCAGC 60.303 57.895 0.00 0.00 42.56 5.25
2490 5157 1.963985 ATATGAGGGAGATGGAGGCC 58.036 55.000 0.00 0.00 0.00 5.19
2492 5159 3.934962 GAGGGAGATGGAGGCCGC 61.935 72.222 0.00 0.00 0.00 6.53
2548 5215 3.402681 ACCTGAGGCCGTCCATGG 61.403 66.667 4.97 4.97 33.74 3.66
2550 5217 2.669133 CCTGAGGCCGTCCATGGAA 61.669 63.158 18.20 0.00 33.74 3.53
2562 5229 3.084786 GTCCATGGAAAGGGTTCTCAAG 58.915 50.000 18.20 0.00 33.92 3.02
2564 5231 1.470098 CATGGAAAGGGTTCTCAAGCG 59.530 52.381 0.00 0.00 33.92 4.68
2565 5232 0.250727 TGGAAAGGGTTCTCAAGCGG 60.251 55.000 0.00 0.00 33.92 5.52
2572 5239 1.374252 GTTCTCAAGCGGCTCCGAA 60.374 57.895 13.11 3.73 42.83 4.30
2633 5300 2.154462 GTGCTGCCTACTGTGATTGTT 58.846 47.619 0.00 0.00 0.00 2.83
2634 5301 2.095567 GTGCTGCCTACTGTGATTGTTG 60.096 50.000 0.00 0.00 0.00 3.33
2635 5302 1.135575 GCTGCCTACTGTGATTGTTGC 60.136 52.381 0.00 0.00 0.00 4.17
2636 5303 1.470098 CTGCCTACTGTGATTGTTGCC 59.530 52.381 0.00 0.00 0.00 4.52
2637 5304 0.811281 GCCTACTGTGATTGTTGCCC 59.189 55.000 0.00 0.00 0.00 5.36
2638 5305 1.614317 GCCTACTGTGATTGTTGCCCT 60.614 52.381 0.00 0.00 0.00 5.19
2639 5306 2.086869 CCTACTGTGATTGTTGCCCTG 58.913 52.381 0.00 0.00 0.00 4.45
2640 5307 1.470098 CTACTGTGATTGTTGCCCTGC 59.530 52.381 0.00 0.00 0.00 4.85
2641 5308 1.210931 CTGTGATTGTTGCCCTGCG 59.789 57.895 0.00 0.00 0.00 5.18
2642 5309 2.203972 CTGTGATTGTTGCCCTGCGG 62.204 60.000 0.00 0.00 0.00 5.69
2643 5310 1.971167 GTGATTGTTGCCCTGCGGA 60.971 57.895 0.00 0.00 0.00 5.54
2644 5311 1.675310 TGATTGTTGCCCTGCGGAG 60.675 57.895 0.00 0.00 0.00 4.63
2660 5327 3.595691 GAGCATATCCCACTCCACG 57.404 57.895 0.00 0.00 0.00 4.94
2661 5328 0.034059 GAGCATATCCCACTCCACGG 59.966 60.000 0.00 0.00 0.00 4.94
2662 5329 1.598130 GCATATCCCACTCCACGGC 60.598 63.158 0.00 0.00 0.00 5.68
2663 5330 1.300931 CATATCCCACTCCACGGCG 60.301 63.158 4.80 4.80 0.00 6.46
2664 5331 3.165160 ATATCCCACTCCACGGCGC 62.165 63.158 6.90 0.00 0.00 6.53
2700 5367 5.584551 AAAAAGAAGTGTACTCATCCCCT 57.415 39.130 0.00 0.00 0.00 4.79
2701 5368 6.697641 AAAAAGAAGTGTACTCATCCCCTA 57.302 37.500 0.00 0.00 0.00 3.53
2709 5376 4.500603 GTACTCATCCCCTATGTGTACG 57.499 50.000 12.06 0.00 46.94 3.67
2734 5401 3.058016 ACATGCTTGGATCTGTGTTTTCG 60.058 43.478 4.44 0.00 0.00 3.46
2735 5402 1.879380 TGCTTGGATCTGTGTTTTCGG 59.121 47.619 0.00 0.00 0.00 4.30
2769 5436 6.094603 GTGATCATGTGAGCCTTTTCTGTAAT 59.905 38.462 0.00 0.00 0.00 1.89
2778 5445 4.220602 AGCCTTTTCTGTAATCGGCAAAAT 59.779 37.500 0.00 0.00 35.98 1.82
2779 5446 5.417580 AGCCTTTTCTGTAATCGGCAAAATA 59.582 36.000 0.00 0.00 35.98 1.40
2794 5462 5.163561 CGGCAAAATAAGGGTGTGATATGTT 60.164 40.000 0.00 0.00 0.00 2.71
2795 5463 6.273071 GGCAAAATAAGGGTGTGATATGTTC 58.727 40.000 0.00 0.00 0.00 3.18
2803 5471 5.385198 AGGGTGTGATATGTTCAGTTTTGT 58.615 37.500 0.00 0.00 34.17 2.83
2868 5545 7.861176 TGTGTTTTCAGTTGTAGTTTTGTTC 57.139 32.000 0.00 0.00 0.00 3.18
2871 5548 9.783256 GTGTTTTCAGTTGTAGTTTTGTTCTAT 57.217 29.630 0.00 0.00 0.00 1.98
2919 5596 8.773404 ACTTGTTGTCTTATTGTGGTATACTC 57.227 34.615 2.25 0.00 0.00 2.59
2922 5599 6.816640 TGTTGTCTTATTGTGGTATACTCAGC 59.183 38.462 2.25 0.00 0.00 4.26
2923 5600 5.588240 TGTCTTATTGTGGTATACTCAGCG 58.412 41.667 2.25 0.00 0.00 5.18
2932 5609 5.595542 TGTGGTATACTCAGCGGTACTAAAT 59.404 40.000 2.25 0.00 0.00 1.40
2933 5610 6.148264 GTGGTATACTCAGCGGTACTAAATC 58.852 44.000 2.25 0.00 0.00 2.17
2935 5612 6.016527 TGGTATACTCAGCGGTACTAAATCTG 60.017 42.308 2.25 0.00 0.00 2.90
2936 5613 3.166489 ACTCAGCGGTACTAAATCTGC 57.834 47.619 0.00 0.00 36.34 4.26
2939 5616 2.361119 TCAGCGGTACTAAATCTGCGAT 59.639 45.455 0.00 0.00 40.42 4.58
2958 5635 8.200120 TCTGCGATAATTAATATGGATCAGAGG 58.800 37.037 0.00 0.00 0.00 3.69
2959 5636 8.078060 TGCGATAATTAATATGGATCAGAGGA 57.922 34.615 0.00 0.00 0.00 3.71
2961 5638 8.821894 GCGATAATTAATATGGATCAGAGGAAC 58.178 37.037 0.00 0.00 0.00 3.62
3017 5810 5.211454 CAAGATATGCAACGTTGACAAACA 58.789 37.500 31.62 18.91 35.94 2.83
3018 5811 5.034554 AGATATGCAACGTTGACAAACAG 57.965 39.130 31.62 2.85 35.94 3.16
3087 5881 4.453819 GCATTAAGACAGTTCAAGCAGTCT 59.546 41.667 0.00 0.00 42.72 3.24
3125 5919 6.945636 TTCCCTAAAAGTACAGGATCAGAA 57.054 37.500 0.00 0.00 33.42 3.02
3135 5929 7.962995 AGTACAGGATCAGAACTCTCAAATA 57.037 36.000 0.00 0.00 0.00 1.40
3137 5931 6.865834 ACAGGATCAGAACTCTCAAATACT 57.134 37.500 0.00 0.00 0.00 2.12
3245 6039 2.425143 TCACCTTCCGTACGAGGTAT 57.575 50.000 23.67 4.64 44.28 2.73
3295 6089 3.067180 GTGTGGTTGATTGCCATCCATAG 59.933 47.826 0.00 0.00 44.11 2.23
3377 6172 7.324935 TCACTAATTTTACACGCCTCTATCAA 58.675 34.615 0.00 0.00 0.00 2.57
3379 6174 7.277981 CACTAATTTTACACGCCTCTATCAACT 59.722 37.037 0.00 0.00 0.00 3.16
3380 6175 6.422776 AATTTTACACGCCTCTATCAACTG 57.577 37.500 0.00 0.00 0.00 3.16
3381 6176 2.579207 TACACGCCTCTATCAACTGC 57.421 50.000 0.00 0.00 0.00 4.40
3382 6177 0.608130 ACACGCCTCTATCAACTGCA 59.392 50.000 0.00 0.00 0.00 4.41
3383 6178 1.001974 ACACGCCTCTATCAACTGCAA 59.998 47.619 0.00 0.00 0.00 4.08
3384 6179 2.283298 CACGCCTCTATCAACTGCAAT 58.717 47.619 0.00 0.00 0.00 3.56
3385 6180 2.679837 CACGCCTCTATCAACTGCAATT 59.320 45.455 0.00 0.00 0.00 2.32
3386 6181 3.127548 CACGCCTCTATCAACTGCAATTT 59.872 43.478 0.00 0.00 0.00 1.82
3387 6182 4.332543 CACGCCTCTATCAACTGCAATTTA 59.667 41.667 0.00 0.00 0.00 1.40
3388 6183 4.941263 ACGCCTCTATCAACTGCAATTTAA 59.059 37.500 0.00 0.00 0.00 1.52
3389 6184 5.065218 ACGCCTCTATCAACTGCAATTTAAG 59.935 40.000 0.00 0.00 0.00 1.85
3390 6185 5.065218 CGCCTCTATCAACTGCAATTTAAGT 59.935 40.000 0.00 0.00 0.00 2.24
3391 6186 6.403636 CGCCTCTATCAACTGCAATTTAAGTT 60.404 38.462 0.00 0.00 37.09 2.66
3392 6187 7.315890 GCCTCTATCAACTGCAATTTAAGTTT 58.684 34.615 0.67 0.00 34.41 2.66
3393 6188 7.814587 GCCTCTATCAACTGCAATTTAAGTTTT 59.185 33.333 0.67 0.00 34.41 2.43
3394 6189 9.132521 CCTCTATCAACTGCAATTTAAGTTTTG 57.867 33.333 0.67 0.00 34.41 2.44
3395 6190 9.683069 CTCTATCAACTGCAATTTAAGTTTTGT 57.317 29.630 0.67 0.00 34.41 2.83
3400 6195 9.862371 TCAACTGCAATTTAAGTTTTGTTTAGA 57.138 25.926 0.67 0.00 34.41 2.10
3514 7107 6.641169 AGATCAGATAACGATGACTAGCAA 57.359 37.500 0.00 0.00 0.00 3.91
3515 7108 7.043961 AGATCAGATAACGATGACTAGCAAA 57.956 36.000 0.00 0.00 0.00 3.68
3516 7109 7.492524 AGATCAGATAACGATGACTAGCAAAA 58.507 34.615 0.00 0.00 0.00 2.44
3517 7110 7.651304 AGATCAGATAACGATGACTAGCAAAAG 59.349 37.037 0.00 0.00 0.00 2.27
3518 7111 6.042777 TCAGATAACGATGACTAGCAAAAGG 58.957 40.000 0.00 0.00 0.00 3.11
3519 7112 6.042777 CAGATAACGATGACTAGCAAAAGGA 58.957 40.000 0.00 0.00 0.00 3.36
3520 7113 6.535150 CAGATAACGATGACTAGCAAAAGGAA 59.465 38.462 0.00 0.00 0.00 3.36
3521 7114 7.064609 CAGATAACGATGACTAGCAAAAGGAAA 59.935 37.037 0.00 0.00 0.00 3.13
3522 7115 7.606456 AGATAACGATGACTAGCAAAAGGAAAA 59.394 33.333 0.00 0.00 0.00 2.29
3523 7116 6.385649 AACGATGACTAGCAAAAGGAAAAA 57.614 33.333 0.00 0.00 0.00 1.94
3524 7117 5.758924 ACGATGACTAGCAAAAGGAAAAAC 58.241 37.500 0.00 0.00 0.00 2.43
3525 7118 5.298276 ACGATGACTAGCAAAAGGAAAAACA 59.702 36.000 0.00 0.00 0.00 2.83
3526 7119 5.625311 CGATGACTAGCAAAAGGAAAAACAC 59.375 40.000 0.00 0.00 0.00 3.32
3527 7120 6.513393 CGATGACTAGCAAAAGGAAAAACACT 60.513 38.462 0.00 0.00 0.00 3.55
3528 7121 6.524101 TGACTAGCAAAAGGAAAAACACTT 57.476 33.333 0.00 0.00 0.00 3.16
3529 7122 6.560711 TGACTAGCAAAAGGAAAAACACTTC 58.439 36.000 0.00 0.00 0.00 3.01
3530 7123 5.902681 ACTAGCAAAAGGAAAAACACTTCC 58.097 37.500 0.00 0.00 44.61 3.46
3540 7133 6.108097 GGAAAAACACTTCCTATCTTAGCG 57.892 41.667 0.00 0.00 41.56 4.26
3639 7232 7.012421 CCAACTCTAGCCCTATACATTGTTTTC 59.988 40.741 0.00 0.00 0.00 2.29
3640 7233 7.439108 ACTCTAGCCCTATACATTGTTTTCT 57.561 36.000 0.00 0.00 0.00 2.52
3645 7238 9.788960 CTAGCCCTATACATTGTTTTCTTTTTC 57.211 33.333 0.00 0.00 0.00 2.29
3654 7247 8.911247 ACATTGTTTTCTTTTTCTGACACTAC 57.089 30.769 0.00 0.00 0.00 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.678743 GGACCTTGGCACACCCCC 62.679 72.222 0.00 0.00 39.29 5.40
30 31 2.937959 TTTGGACCTTGGCACACCCC 62.938 60.000 0.00 0.00 39.29 4.95
31 32 1.456705 TTTGGACCTTGGCACACCC 60.457 57.895 0.00 0.00 39.29 4.61
32 33 0.467290 TCTTTGGACCTTGGCACACC 60.467 55.000 0.00 0.00 39.29 4.16
33 34 1.398692 TTCTTTGGACCTTGGCACAC 58.601 50.000 0.00 0.00 39.29 3.82
34 35 2.380064 ATTCTTTGGACCTTGGCACA 57.620 45.000 0.00 0.00 0.00 4.57
35 36 4.462483 TGAATATTCTTTGGACCTTGGCAC 59.538 41.667 16.24 0.00 0.00 5.01
36 37 4.671831 TGAATATTCTTTGGACCTTGGCA 58.328 39.130 16.24 0.00 0.00 4.92
37 38 5.360714 TGATGAATATTCTTTGGACCTTGGC 59.639 40.000 16.24 0.00 0.00 4.52
38 39 7.408756 TTGATGAATATTCTTTGGACCTTGG 57.591 36.000 16.24 0.00 0.00 3.61
39 40 9.880157 AAATTGATGAATATTCTTTGGACCTTG 57.120 29.630 16.24 0.00 0.00 3.61
55 56 9.263538 CCACAAAAATCTGAGAAAATTGATGAA 57.736 29.630 10.20 0.00 0.00 2.57
56 57 7.874016 CCCACAAAAATCTGAGAAAATTGATGA 59.126 33.333 10.20 0.00 0.00 2.92
57 58 7.360607 GCCCACAAAAATCTGAGAAAATTGATG 60.361 37.037 10.20 6.08 0.00 3.07
58 59 6.652062 GCCCACAAAAATCTGAGAAAATTGAT 59.348 34.615 10.20 0.00 0.00 2.57
59 60 5.990996 GCCCACAAAAATCTGAGAAAATTGA 59.009 36.000 10.20 0.00 0.00 2.57
60 61 5.759273 TGCCCACAAAAATCTGAGAAAATTG 59.241 36.000 0.00 0.00 0.00 2.32
61 62 5.927819 TGCCCACAAAAATCTGAGAAAATT 58.072 33.333 0.00 0.00 0.00 1.82
62 63 5.549742 TGCCCACAAAAATCTGAGAAAAT 57.450 34.783 0.00 0.00 0.00 1.82
63 64 5.128499 TCTTGCCCACAAAAATCTGAGAAAA 59.872 36.000 0.00 0.00 34.74 2.29
64 65 4.648762 TCTTGCCCACAAAAATCTGAGAAA 59.351 37.500 0.00 0.00 34.74 2.52
65 66 4.214310 TCTTGCCCACAAAAATCTGAGAA 58.786 39.130 0.00 0.00 34.74 2.87
66 67 3.831323 TCTTGCCCACAAAAATCTGAGA 58.169 40.909 0.00 0.00 34.74 3.27
67 68 4.589216 TTCTTGCCCACAAAAATCTGAG 57.411 40.909 0.00 0.00 34.74 3.35
68 69 5.350504 TTTTCTTGCCCACAAAAATCTGA 57.649 34.783 0.00 0.00 34.74 3.27
69 70 6.260493 TCATTTTTCTTGCCCACAAAAATCTG 59.740 34.615 0.00 0.00 37.53 2.90
70 71 6.355747 TCATTTTTCTTGCCCACAAAAATCT 58.644 32.000 0.00 0.00 37.53 2.40
71 72 6.293571 CCTCATTTTTCTTGCCCACAAAAATC 60.294 38.462 0.00 0.00 37.53 2.17
72 73 5.532032 CCTCATTTTTCTTGCCCACAAAAAT 59.468 36.000 0.00 0.00 39.29 1.82
73 74 4.880696 CCTCATTTTTCTTGCCCACAAAAA 59.119 37.500 0.00 0.00 34.74 1.94
74 75 4.450053 CCTCATTTTTCTTGCCCACAAAA 58.550 39.130 0.00 0.00 34.74 2.44
75 76 3.181456 CCCTCATTTTTCTTGCCCACAAA 60.181 43.478 0.00 0.00 34.74 2.83
76 77 2.368221 CCCTCATTTTTCTTGCCCACAA 59.632 45.455 0.00 0.00 0.00 3.33
77 78 1.969923 CCCTCATTTTTCTTGCCCACA 59.030 47.619 0.00 0.00 0.00 4.17
78 79 1.970640 ACCCTCATTTTTCTTGCCCAC 59.029 47.619 0.00 0.00 0.00 4.61
79 80 2.368221 CAACCCTCATTTTTCTTGCCCA 59.632 45.455 0.00 0.00 0.00 5.36
80 81 2.871637 GCAACCCTCATTTTTCTTGCCC 60.872 50.000 0.00 0.00 0.00 5.36
81 82 2.037641 AGCAACCCTCATTTTTCTTGCC 59.962 45.455 0.00 0.00 35.63 4.52
82 83 3.391506 AGCAACCCTCATTTTTCTTGC 57.608 42.857 0.00 0.00 35.33 4.01
83 84 4.512571 CCAAAGCAACCCTCATTTTTCTTG 59.487 41.667 0.00 0.00 0.00 3.02
84 85 4.408596 TCCAAAGCAACCCTCATTTTTCTT 59.591 37.500 0.00 0.00 0.00 2.52
85 86 3.966665 TCCAAAGCAACCCTCATTTTTCT 59.033 39.130 0.00 0.00 0.00 2.52
86 87 4.309933 CTCCAAAGCAACCCTCATTTTTC 58.690 43.478 0.00 0.00 0.00 2.29
87 88 4.341366 CTCCAAAGCAACCCTCATTTTT 57.659 40.909 0.00 0.00 0.00 1.94
101 102 2.564771 TCAGTCACTTGTGCTCCAAAG 58.435 47.619 0.00 0.00 31.20 2.77
102 103 2.708216 TCAGTCACTTGTGCTCCAAA 57.292 45.000 0.00 0.00 31.20 3.28
103 104 2.092968 ACTTCAGTCACTTGTGCTCCAA 60.093 45.455 0.00 0.00 0.00 3.53
104 105 1.486310 ACTTCAGTCACTTGTGCTCCA 59.514 47.619 0.00 0.00 0.00 3.86
105 106 1.869767 CACTTCAGTCACTTGTGCTCC 59.130 52.381 0.00 0.00 0.00 4.70
106 107 2.286294 CACACTTCAGTCACTTGTGCTC 59.714 50.000 0.00 0.00 31.84 4.26
107 108 2.093500 TCACACTTCAGTCACTTGTGCT 60.093 45.455 2.86 0.00 37.96 4.40
108 109 2.279741 TCACACTTCAGTCACTTGTGC 58.720 47.619 2.86 0.00 37.96 4.57
109 110 5.065090 TGAAATCACACTTCAGTCACTTGTG 59.935 40.000 1.43 1.43 39.15 3.33
110 111 5.185454 TGAAATCACACTTCAGTCACTTGT 58.815 37.500 0.00 0.00 0.00 3.16
111 112 5.525012 TCTGAAATCACACTTCAGTCACTTG 59.475 40.000 11.26 0.00 46.53 3.16
112 113 5.674525 TCTGAAATCACACTTCAGTCACTT 58.325 37.500 11.26 0.00 46.53 3.16
113 114 5.069648 TCTCTGAAATCACACTTCAGTCACT 59.930 40.000 11.26 0.00 46.53 3.41
114 115 5.292765 TCTCTGAAATCACACTTCAGTCAC 58.707 41.667 11.26 0.00 46.53 3.67
115 116 5.510349 CCTCTCTGAAATCACACTTCAGTCA 60.510 44.000 11.26 1.09 46.53 3.41
116 117 4.928615 CCTCTCTGAAATCACACTTCAGTC 59.071 45.833 11.26 0.00 46.53 3.51
117 118 4.590647 TCCTCTCTGAAATCACACTTCAGT 59.409 41.667 11.26 0.00 46.53 3.41
119 120 5.551305 TTCCTCTCTGAAATCACACTTCA 57.449 39.130 0.00 0.00 0.00 3.02
120 121 6.652481 TCATTTCCTCTCTGAAATCACACTTC 59.348 38.462 0.00 0.00 41.74 3.01
121 122 6.537355 TCATTTCCTCTCTGAAATCACACTT 58.463 36.000 0.00 0.00 41.74 3.16
122 123 6.119240 TCATTTCCTCTCTGAAATCACACT 57.881 37.500 0.00 0.00 41.74 3.55
123 124 6.373774 ACATCATTTCCTCTCTGAAATCACAC 59.626 38.462 0.00 0.00 41.74 3.82
124 125 6.373495 CACATCATTTCCTCTCTGAAATCACA 59.627 38.462 0.00 0.00 41.74 3.58
125 126 6.373774 ACACATCATTTCCTCTCTGAAATCAC 59.626 38.462 0.00 0.00 41.74 3.06
126 127 6.479006 ACACATCATTTCCTCTCTGAAATCA 58.521 36.000 0.00 0.00 41.74 2.57
127 128 6.998968 ACACATCATTTCCTCTCTGAAATC 57.001 37.500 0.00 0.00 41.74 2.17
128 129 7.449395 TCAAACACATCATTTCCTCTCTGAAAT 59.551 33.333 0.00 0.00 43.84 2.17
129 130 6.772233 TCAAACACATCATTTCCTCTCTGAAA 59.228 34.615 0.00 0.00 38.51 2.69
130 131 6.298361 TCAAACACATCATTTCCTCTCTGAA 58.702 36.000 0.00 0.00 0.00 3.02
131 132 5.868454 TCAAACACATCATTTCCTCTCTGA 58.132 37.500 0.00 0.00 0.00 3.27
132 133 5.936372 TCTCAAACACATCATTTCCTCTCTG 59.064 40.000 0.00 0.00 0.00 3.35
133 134 6.119240 TCTCAAACACATCATTTCCTCTCT 57.881 37.500 0.00 0.00 0.00 3.10
134 135 5.353678 CCTCTCAAACACATCATTTCCTCTC 59.646 44.000 0.00 0.00 0.00 3.20
135 136 5.251764 CCTCTCAAACACATCATTTCCTCT 58.748 41.667 0.00 0.00 0.00 3.69
136 137 4.397417 CCCTCTCAAACACATCATTTCCTC 59.603 45.833 0.00 0.00 0.00 3.71
137 138 4.043310 TCCCTCTCAAACACATCATTTCCT 59.957 41.667 0.00 0.00 0.00 3.36
138 139 4.335416 TCCCTCTCAAACACATCATTTCC 58.665 43.478 0.00 0.00 0.00 3.13
139 140 4.397417 CCTCCCTCTCAAACACATCATTTC 59.603 45.833 0.00 0.00 0.00 2.17
140 141 4.202609 ACCTCCCTCTCAAACACATCATTT 60.203 41.667 0.00 0.00 0.00 2.32
141 142 3.331889 ACCTCCCTCTCAAACACATCATT 59.668 43.478 0.00 0.00 0.00 2.57
142 143 2.915604 ACCTCCCTCTCAAACACATCAT 59.084 45.455 0.00 0.00 0.00 2.45
143 144 2.038952 CACCTCCCTCTCAAACACATCA 59.961 50.000 0.00 0.00 0.00 3.07
144 145 2.303022 TCACCTCCCTCTCAAACACATC 59.697 50.000 0.00 0.00 0.00 3.06
145 146 2.304180 CTCACCTCCCTCTCAAACACAT 59.696 50.000 0.00 0.00 0.00 3.21
146 147 1.694150 CTCACCTCCCTCTCAAACACA 59.306 52.381 0.00 0.00 0.00 3.72
147 148 1.694696 ACTCACCTCCCTCTCAAACAC 59.305 52.381 0.00 0.00 0.00 3.32
148 149 1.971357 GACTCACCTCCCTCTCAAACA 59.029 52.381 0.00 0.00 0.00 2.83
149 150 1.971357 TGACTCACCTCCCTCTCAAAC 59.029 52.381 0.00 0.00 0.00 2.93
150 151 1.971357 GTGACTCACCTCCCTCTCAAA 59.029 52.381 0.00 0.00 0.00 2.69
151 152 1.148027 AGTGACTCACCTCCCTCTCAA 59.852 52.381 5.51 0.00 34.49 3.02
152 153 0.780637 AGTGACTCACCTCCCTCTCA 59.219 55.000 5.51 0.00 34.49 3.27
153 154 1.548269 CAAGTGACTCACCTCCCTCTC 59.452 57.143 5.51 0.00 34.49 3.20
154 155 1.638529 CAAGTGACTCACCTCCCTCT 58.361 55.000 5.51 0.00 34.49 3.69
155 156 0.610687 CCAAGTGACTCACCTCCCTC 59.389 60.000 5.51 0.00 34.49 4.30
156 157 0.838122 CCCAAGTGACTCACCTCCCT 60.838 60.000 5.51 0.00 34.49 4.20
157 158 1.128188 ACCCAAGTGACTCACCTCCC 61.128 60.000 5.51 0.00 34.49 4.30
158 159 2.453242 ACCCAAGTGACTCACCTCC 58.547 57.895 5.51 0.00 34.49 4.30
168 169 4.935352 TTCCTTGATTTTCACCCAAGTG 57.065 40.909 0.00 0.00 46.00 3.16
169 170 5.742838 GCATTTCCTTGATTTTCACCCAAGT 60.743 40.000 0.00 0.00 36.47 3.16
170 171 4.692155 GCATTTCCTTGATTTTCACCCAAG 59.308 41.667 0.00 0.00 37.58 3.61
171 172 4.504689 GGCATTTCCTTGATTTTCACCCAA 60.505 41.667 0.00 0.00 0.00 4.12
172 173 3.007831 GGCATTTCCTTGATTTTCACCCA 59.992 43.478 0.00 0.00 0.00 4.51
173 174 3.599343 GGCATTTCCTTGATTTTCACCC 58.401 45.455 0.00 0.00 0.00 4.61
174 175 3.007831 TGGGCATTTCCTTGATTTTCACC 59.992 43.478 0.00 0.00 34.39 4.02
175 176 4.270245 TGGGCATTTCCTTGATTTTCAC 57.730 40.909 0.00 0.00 34.39 3.18
176 177 4.347583 ACTTGGGCATTTCCTTGATTTTCA 59.652 37.500 0.00 0.00 34.39 2.69
177 178 4.692155 CACTTGGGCATTTCCTTGATTTTC 59.308 41.667 0.00 0.00 34.39 2.29
178 179 4.505390 CCACTTGGGCATTTCCTTGATTTT 60.505 41.667 0.00 0.00 34.39 1.82
179 180 3.008266 CCACTTGGGCATTTCCTTGATTT 59.992 43.478 0.00 0.00 34.39 2.17
180 181 2.568509 CCACTTGGGCATTTCCTTGATT 59.431 45.455 0.00 0.00 34.39 2.57
181 182 2.181975 CCACTTGGGCATTTCCTTGAT 58.818 47.619 0.00 0.00 34.39 2.57
182 183 1.133199 ACCACTTGGGCATTTCCTTGA 60.133 47.619 0.00 0.00 42.05 3.02
183 184 1.341080 ACCACTTGGGCATTTCCTTG 58.659 50.000 0.00 0.00 42.05 3.61
184 185 2.101640 AACCACTTGGGCATTTCCTT 57.898 45.000 0.00 0.00 42.05 3.36
185 186 2.990740 TAACCACTTGGGCATTTCCT 57.009 45.000 0.00 0.00 42.05 3.36
186 187 2.897326 ACTTAACCACTTGGGCATTTCC 59.103 45.455 0.00 0.00 42.05 3.13
187 188 3.826729 AGACTTAACCACTTGGGCATTTC 59.173 43.478 0.00 0.00 42.05 2.17
188 189 3.844640 AGACTTAACCACTTGGGCATTT 58.155 40.909 0.00 0.00 42.05 2.32
189 190 3.525800 AGACTTAACCACTTGGGCATT 57.474 42.857 0.00 0.00 42.05 3.56
190 191 4.042934 AGTTAGACTTAACCACTTGGGCAT 59.957 41.667 0.00 0.00 40.03 4.40
191 192 3.393278 AGTTAGACTTAACCACTTGGGCA 59.607 43.478 0.00 0.00 40.03 5.36
192 193 3.751698 CAGTTAGACTTAACCACTTGGGC 59.248 47.826 0.00 0.00 40.03 5.36
193 194 5.221661 ACTCAGTTAGACTTAACCACTTGGG 60.222 44.000 0.00 0.00 40.03 4.12
194 195 5.855045 ACTCAGTTAGACTTAACCACTTGG 58.145 41.667 0.00 0.00 40.03 3.61
195 196 6.984474 TCAACTCAGTTAGACTTAACCACTTG 59.016 38.462 0.00 0.00 40.03 3.16
196 197 7.120923 TCAACTCAGTTAGACTTAACCACTT 57.879 36.000 0.00 0.00 40.03 3.16
197 198 6.726490 TCAACTCAGTTAGACTTAACCACT 57.274 37.500 0.00 0.00 40.03 4.00
198 199 7.656137 TGAATCAACTCAGTTAGACTTAACCAC 59.344 37.037 0.00 0.00 40.03 4.16
199 200 7.732025 TGAATCAACTCAGTTAGACTTAACCA 58.268 34.615 0.00 0.00 40.03 3.67
200 201 8.603242 TTGAATCAACTCAGTTAGACTTAACC 57.397 34.615 0.00 0.00 40.03 2.85
203 204 9.832445 AGTTTTGAATCAACTCAGTTAGACTTA 57.168 29.630 0.00 0.00 27.49 2.24
204 205 8.738645 AGTTTTGAATCAACTCAGTTAGACTT 57.261 30.769 0.00 0.00 27.49 3.01
205 206 8.371770 GAGTTTTGAATCAACTCAGTTAGACT 57.628 34.615 9.52 0.00 46.48 3.24
214 215 8.647143 TTGAATTTGGAGTTTTGAATCAACTC 57.353 30.769 6.55 6.55 46.50 3.01
215 216 8.882736 GTTTGAATTTGGAGTTTTGAATCAACT 58.117 29.630 0.00 0.00 37.18 3.16
216 217 8.663911 TGTTTGAATTTGGAGTTTTGAATCAAC 58.336 29.630 0.00 0.00 0.00 3.18
217 218 8.783833 TGTTTGAATTTGGAGTTTTGAATCAA 57.216 26.923 0.00 0.00 0.00 2.57
218 219 8.783833 TTGTTTGAATTTGGAGTTTTGAATCA 57.216 26.923 0.00 0.00 0.00 2.57
221 222 9.890352 CTTTTTGTTTGAATTTGGAGTTTTGAA 57.110 25.926 0.00 0.00 0.00 2.69
222 223 8.510505 CCTTTTTGTTTGAATTTGGAGTTTTGA 58.489 29.630 0.00 0.00 0.00 2.69
223 224 8.510505 TCCTTTTTGTTTGAATTTGGAGTTTTG 58.489 29.630 0.00 0.00 0.00 2.44
224 225 8.628630 TCCTTTTTGTTTGAATTTGGAGTTTT 57.371 26.923 0.00 0.00 0.00 2.43
225 226 8.628630 TTCCTTTTTGTTTGAATTTGGAGTTT 57.371 26.923 0.00 0.00 0.00 2.66
226 227 8.628630 TTTCCTTTTTGTTTGAATTTGGAGTT 57.371 26.923 0.00 0.00 0.00 3.01
227 228 8.628630 TTTTCCTTTTTGTTTGAATTTGGAGT 57.371 26.923 0.00 0.00 0.00 3.85
256 257 9.366216 GGTTTTTGCTCTTTTTCTTTTTCTAGA 57.634 29.630 0.00 0.00 0.00 2.43
257 258 9.150348 TGGTTTTTGCTCTTTTTCTTTTTCTAG 57.850 29.630 0.00 0.00 0.00 2.43
258 259 9.150348 CTGGTTTTTGCTCTTTTTCTTTTTCTA 57.850 29.630 0.00 0.00 0.00 2.10
259 260 7.119699 CCTGGTTTTTGCTCTTTTTCTTTTTCT 59.880 33.333 0.00 0.00 0.00 2.52
260 261 7.119116 TCCTGGTTTTTGCTCTTTTTCTTTTTC 59.881 33.333 0.00 0.00 0.00 2.29
261 262 6.939730 TCCTGGTTTTTGCTCTTTTTCTTTTT 59.060 30.769 0.00 0.00 0.00 1.94
262 263 6.472016 TCCTGGTTTTTGCTCTTTTTCTTTT 58.528 32.000 0.00 0.00 0.00 2.27
263 264 6.048732 TCCTGGTTTTTGCTCTTTTTCTTT 57.951 33.333 0.00 0.00 0.00 2.52
264 265 5.675684 TCCTGGTTTTTGCTCTTTTTCTT 57.324 34.783 0.00 0.00 0.00 2.52
265 266 5.129320 ACATCCTGGTTTTTGCTCTTTTTCT 59.871 36.000 0.00 0.00 0.00 2.52
266 267 5.359756 ACATCCTGGTTTTTGCTCTTTTTC 58.640 37.500 0.00 0.00 0.00 2.29
267 268 5.104982 TGACATCCTGGTTTTTGCTCTTTTT 60.105 36.000 0.00 0.00 0.00 1.94
268 269 4.405358 TGACATCCTGGTTTTTGCTCTTTT 59.595 37.500 0.00 0.00 0.00 2.27
269 270 3.960102 TGACATCCTGGTTTTTGCTCTTT 59.040 39.130 0.00 0.00 0.00 2.52
270 271 3.319122 GTGACATCCTGGTTTTTGCTCTT 59.681 43.478 0.00 0.00 0.00 2.85
271 272 2.887152 GTGACATCCTGGTTTTTGCTCT 59.113 45.455 0.00 0.00 0.00 4.09
272 273 2.350772 CGTGACATCCTGGTTTTTGCTC 60.351 50.000 0.00 0.00 0.00 4.26
273 274 1.608590 CGTGACATCCTGGTTTTTGCT 59.391 47.619 0.00 0.00 0.00 3.91
274 275 1.335872 CCGTGACATCCTGGTTTTTGC 60.336 52.381 0.00 0.00 0.00 3.68
275 276 2.226330 TCCGTGACATCCTGGTTTTTG 58.774 47.619 0.00 0.00 0.00 2.44
276 277 2.649531 TCCGTGACATCCTGGTTTTT 57.350 45.000 0.00 0.00 0.00 1.94
277 278 2.879103 ATCCGTGACATCCTGGTTTT 57.121 45.000 0.00 0.00 0.00 2.43
278 279 2.618045 GGAATCCGTGACATCCTGGTTT 60.618 50.000 0.00 0.00 0.00 3.27
279 280 1.065418 GGAATCCGTGACATCCTGGTT 60.065 52.381 0.00 0.00 0.00 3.67
280 281 0.541863 GGAATCCGTGACATCCTGGT 59.458 55.000 0.00 0.00 0.00 4.00
281 282 0.179045 GGGAATCCGTGACATCCTGG 60.179 60.000 0.00 0.00 32.41 4.45
282 283 3.386543 GGGAATCCGTGACATCCTG 57.613 57.895 0.00 0.00 32.41 3.86
297 298 4.338710 CGGGGTTTGGCTTCGGGA 62.339 66.667 0.00 0.00 0.00 5.14
300 301 3.431725 GAGCGGGGTTTGGCTTCG 61.432 66.667 0.00 0.00 40.16 3.79
306 307 2.742372 CTGTCCGAGCGGGGTTTG 60.742 66.667 9.29 0.00 36.01 2.93
308 309 3.692406 GACTGTCCGAGCGGGGTT 61.692 66.667 9.29 0.00 36.01 4.11
315 316 3.691744 GAGGCTGCGACTGTCCGAG 62.692 68.421 1.55 0.00 0.00 4.63
324 326 0.036952 CTTCCTTTGAGAGGCTGCGA 60.037 55.000 0.00 0.00 45.87 5.10
329 331 1.172175 CCTTGCTTCCTTTGAGAGGC 58.828 55.000 0.00 0.00 45.87 4.70
331 333 3.415457 AGACCTTGCTTCCTTTGAGAG 57.585 47.619 0.00 0.00 0.00 3.20
336 338 1.636003 CCCCTAGACCTTGCTTCCTTT 59.364 52.381 0.00 0.00 0.00 3.11
337 339 1.290134 CCCCTAGACCTTGCTTCCTT 58.710 55.000 0.00 0.00 0.00 3.36
339 341 0.620700 TCCCCCTAGACCTTGCTTCC 60.621 60.000 0.00 0.00 0.00 3.46
342 344 0.325765 GAGTCCCCCTAGACCTTGCT 60.326 60.000 0.00 0.00 37.49 3.91
350 352 2.511452 CGCCATGGAGTCCCCCTAG 61.511 68.421 18.40 0.00 0.00 3.02
351 353 2.445845 CGCCATGGAGTCCCCCTA 60.446 66.667 18.40 0.00 0.00 3.53
381 383 0.843984 CCACCGTCCCTTAATCCCAT 59.156 55.000 0.00 0.00 0.00 4.00
383 385 1.137697 ATCCACCGTCCCTTAATCCC 58.862 55.000 0.00 0.00 0.00 3.85
389 391 2.671070 CAGCATCCACCGTCCCTT 59.329 61.111 0.00 0.00 0.00 3.95
405 407 2.756400 CCCTACCACTTGGCAGCA 59.244 61.111 0.00 0.00 39.32 4.41
412 414 3.327404 CCGGTGCCCCTACCACTT 61.327 66.667 0.00 0.00 40.89 3.16
430 432 3.771160 ACGACCTTGGCCGCCTAG 61.771 66.667 13.41 13.41 0.00 3.02
431 433 4.077184 CACGACCTTGGCCGCCTA 62.077 66.667 11.61 1.40 0.00 3.93
437 439 3.499737 CGATGGCACGACCTTGGC 61.500 66.667 0.00 0.00 42.37 4.52
438 440 2.819595 CCGATGGCACGACCTTGG 60.820 66.667 10.33 0.00 40.22 3.61
464 466 2.199652 CCAAAACAAGGAGCCGCCA 61.200 57.895 0.00 0.00 40.02 5.69
477 479 2.902457 GCCTCCCGACCTCCCAAAA 61.902 63.158 0.00 0.00 0.00 2.44
488 490 0.825840 CTCCTTCTCCTAGCCTCCCG 60.826 65.000 0.00 0.00 0.00 5.14
500 502 7.489239 AGTTTCTATTGTAGCTTCTCCTTCT 57.511 36.000 0.00 0.00 0.00 2.85
541 543 6.535274 TTTTGGTTTAAGAGTAAGCTCGTC 57.465 37.500 0.00 0.00 46.03 4.20
542 544 6.708949 TCATTTTGGTTTAAGAGTAAGCTCGT 59.291 34.615 0.00 0.00 46.03 4.18
573 576 9.705290 AAAACACACCAGGAATGTAATAAAATC 57.295 29.630 0.00 0.00 0.00 2.17
582 585 5.067273 TCGATAAAAACACACCAGGAATGT 58.933 37.500 0.00 0.00 0.00 2.71
583 586 5.621197 TCGATAAAAACACACCAGGAATG 57.379 39.130 0.00 0.00 0.00 2.67
584 587 5.943416 TCATCGATAAAAACACACCAGGAAT 59.057 36.000 0.00 0.00 0.00 3.01
585 588 5.180492 GTCATCGATAAAAACACACCAGGAA 59.820 40.000 0.00 0.00 0.00 3.36
586 589 4.693566 GTCATCGATAAAAACACACCAGGA 59.306 41.667 0.00 0.00 0.00 3.86
587 590 4.454161 TGTCATCGATAAAAACACACCAGG 59.546 41.667 0.00 0.00 0.00 4.45
588 591 5.605564 TGTCATCGATAAAAACACACCAG 57.394 39.130 0.00 0.00 0.00 4.00
589 592 5.297029 TGTTGTCATCGATAAAAACACACCA 59.703 36.000 0.00 0.00 0.00 4.17
590 593 5.753744 TGTTGTCATCGATAAAAACACACC 58.246 37.500 0.00 0.00 0.00 4.16
591 594 7.075121 TCATGTTGTCATCGATAAAAACACAC 58.925 34.615 6.44 6.96 30.99 3.82
602 605 4.332543 GCCAAATACTCATGTTGTCATCGA 59.667 41.667 0.00 0.00 31.15 3.59
607 610 7.989826 AGAAATAGCCAAATACTCATGTTGTC 58.010 34.615 0.00 0.00 0.00 3.18
642 645 6.869913 CCTGTGACTGCATGTTTATCATTTTT 59.130 34.615 0.00 0.00 34.09 1.94
646 649 3.379372 GCCTGTGACTGCATGTTTATCAT 59.621 43.478 0.00 0.00 37.22 2.45
647 650 2.749076 GCCTGTGACTGCATGTTTATCA 59.251 45.455 0.00 0.00 0.00 2.15
648 651 3.012518 AGCCTGTGACTGCATGTTTATC 58.987 45.455 0.00 0.00 0.00 1.75
660 663 1.681793 TCTAGCGGATTAGCCTGTGAC 59.318 52.381 0.00 0.00 38.01 3.67
707 710 6.043243 ACCACTAATCCGATCAGGTTATCATT 59.957 38.462 0.00 0.00 41.99 2.57
708 711 5.544176 ACCACTAATCCGATCAGGTTATCAT 59.456 40.000 0.00 0.00 41.99 2.45
709 712 4.899457 ACCACTAATCCGATCAGGTTATCA 59.101 41.667 0.00 0.00 41.99 2.15
713 716 4.543689 TCTACCACTAATCCGATCAGGTT 58.456 43.478 0.00 0.00 41.99 3.50
715 718 4.559704 GCTTCTACCACTAATCCGATCAGG 60.560 50.000 0.00 0.00 42.97 3.86
736 739 0.902516 AAGAGGGCGAAGACTCAGCT 60.903 55.000 0.00 0.00 35.90 4.24
761 764 7.393515 AGTTTTTAATTAAAGAGATGCCCGAGT 59.606 33.333 10.40 0.00 0.00 4.18
808 811 0.917259 CCTCGATTGTTCGCTTCTCG 59.083 55.000 0.00 0.00 45.10 4.04
813 816 0.895530 TCTTCCCTCGATTGTTCGCT 59.104 50.000 0.00 0.00 45.10 4.93
818 821 5.365021 AAGATCAATCTTCCCTCGATTGT 57.635 39.130 11.21 1.75 43.27 2.71
820 823 7.158021 GTGATAAGATCAATCTTCCCTCGATT 58.842 38.462 8.48 0.00 43.27 3.34
827 830 8.688747 AGAAATGGTGATAAGATCAATCTTCC 57.311 34.615 8.48 5.17 43.27 3.46
862 875 5.130477 GGAGGTTAACCAGGTGATAAGATCA 59.870 44.000 26.26 0.00 38.89 2.92
903 919 3.383185 AGGAATGCTTAGGAAGAGACGAG 59.617 47.826 0.00 0.00 0.00 4.18
906 922 3.712187 CGAGGAATGCTTAGGAAGAGAC 58.288 50.000 0.00 0.00 0.00 3.36
907 923 2.101582 GCGAGGAATGCTTAGGAAGAGA 59.898 50.000 0.00 0.00 0.00 3.10
908 924 2.478831 GCGAGGAATGCTTAGGAAGAG 58.521 52.381 0.00 0.00 0.00 2.85
909 925 1.139058 GGCGAGGAATGCTTAGGAAGA 59.861 52.381 0.00 0.00 0.00 2.87
910 926 1.139853 AGGCGAGGAATGCTTAGGAAG 59.860 52.381 0.00 0.00 0.00 3.46
911 927 1.139058 GAGGCGAGGAATGCTTAGGAA 59.861 52.381 0.00 0.00 0.00 3.36
912 928 0.753262 GAGGCGAGGAATGCTTAGGA 59.247 55.000 0.00 0.00 0.00 2.94
913 929 0.755686 AGAGGCGAGGAATGCTTAGG 59.244 55.000 0.00 0.00 0.00 2.69
914 930 2.478831 GAAGAGGCGAGGAATGCTTAG 58.521 52.381 0.00 0.00 0.00 2.18
915 931 1.139058 GGAAGAGGCGAGGAATGCTTA 59.861 52.381 0.00 0.00 0.00 3.09
916 932 0.107459 GGAAGAGGCGAGGAATGCTT 60.107 55.000 0.00 0.00 0.00 3.91
917 933 0.980231 AGGAAGAGGCGAGGAATGCT 60.980 55.000 0.00 0.00 0.00 3.79
918 934 0.531753 GAGGAAGAGGCGAGGAATGC 60.532 60.000 0.00 0.00 0.00 3.56
921 937 2.711922 GCGAGGAAGAGGCGAGGAA 61.712 63.158 0.00 0.00 0.00 3.36
928 944 1.153469 GCAGGAAGCGAGGAAGAGG 60.153 63.158 0.00 0.00 0.00 3.69
940 956 3.303135 ACGGACGAGCAGCAGGAA 61.303 61.111 0.00 0.00 0.00 3.36
972 999 2.027073 TAGTGCGTGCTTCAAGCCG 61.027 57.895 7.01 11.23 41.51 5.52
1027 1054 3.827302 GCGGATTGGGAGATACTTAGAGA 59.173 47.826 0.00 0.00 0.00 3.10
1044 2047 2.019249 CACATGAACTGATTGGCGGAT 58.981 47.619 0.00 0.00 0.00 4.18
1056 2059 3.375299 CACTAGGCCTTAAGCACATGAAC 59.625 47.826 12.58 0.00 46.50 3.18
1062 2065 1.706287 GCGCACTAGGCCTTAAGCAC 61.706 60.000 12.58 2.54 46.50 4.40
1143 2149 4.082190 GGATGCCTTCCCTCTAAAACAAAC 60.082 45.833 0.00 0.00 38.75 2.93
1224 2232 4.935352 AAACCACAGAAAGCATAGCAAA 57.065 36.364 0.00 0.00 0.00 3.68
1251 2266 6.481644 TGTGATGGTTTTTGGCAATTTACTTC 59.518 34.615 0.00 1.69 0.00 3.01
1252 2267 6.352516 TGTGATGGTTTTTGGCAATTTACTT 58.647 32.000 0.00 0.00 0.00 2.24
1277 2292 5.006261 GGGTGTTTAATGACTTTTGCACAAC 59.994 40.000 0.00 0.00 0.00 3.32
1352 2455 9.612066 ATTGCGAAAAATCATTATAATTGGGTT 57.388 25.926 0.00 0.00 0.00 4.11
1363 2466 9.474920 TCAAAGAGTAAATTGCGAAAAATCATT 57.525 25.926 0.00 0.00 0.00 2.57
1364 2467 9.474920 TTCAAAGAGTAAATTGCGAAAAATCAT 57.525 25.926 0.00 0.00 0.00 2.45
1373 2476 6.577055 TGTCGAATTTCAAAGAGTAAATTGCG 59.423 34.615 0.00 0.00 35.87 4.85
1409 2512 4.273480 ACACGAAAAGAGAATCACCACAAG 59.727 41.667 0.00 0.00 37.82 3.16
1410 2513 4.196193 ACACGAAAAGAGAATCACCACAA 58.804 39.130 0.00 0.00 37.82 3.33
1421 2524 2.349886 GCCAGCATCTACACGAAAAGAG 59.650 50.000 0.00 0.00 0.00 2.85
1425 2528 2.028112 AGAAGCCAGCATCTACACGAAA 60.028 45.455 0.00 0.00 0.00 3.46
1431 2534 1.488393 AGGGAAGAAGCCAGCATCTAC 59.512 52.381 0.00 0.00 0.00 2.59
1446 2549 1.475034 GGCGACATATGCAGAAGGGAA 60.475 52.381 1.58 0.00 0.00 3.97
1460 2563 3.150647 ATCATCGATGGCGGCGACA 62.151 57.895 21.84 21.84 40.94 4.35
1462 2565 2.356194 CATCATCGATGGCGGCGA 60.356 61.111 24.61 5.10 42.48 5.54
1463 2566 1.955663 TTCATCATCGATGGCGGCG 60.956 57.895 24.61 0.51 40.15 6.46
1472 2575 1.449423 TGGCCGTGGTTCATCATCG 60.449 57.895 0.00 0.00 0.00 3.84
1501 2604 1.871126 GCCAAGGTGAAGAAGCTGGC 61.871 60.000 0.00 0.00 40.70 4.85
1506 2609 1.667724 CATAGCGCCAAGGTGAAGAAG 59.332 52.381 2.29 0.00 0.00 2.85
1510 2613 3.903783 GCATAGCGCCAAGGTGAA 58.096 55.556 2.29 0.00 32.94 3.18
1609 2712 3.104602 CTTGCCCTGCTTCATCGCG 62.105 63.158 0.00 0.00 0.00 5.87
1610 2713 2.768492 CCTTGCCCTGCTTCATCGC 61.768 63.158 0.00 0.00 0.00 4.58
1611 2714 0.107703 TACCTTGCCCTGCTTCATCG 60.108 55.000 0.00 0.00 0.00 3.84
1645 2748 2.726821 GGAATTCTGTTGGATGAGGCA 58.273 47.619 5.23 0.00 0.00 4.75
1654 2757 1.501741 CGGCACCGGAATTCTGTTG 59.498 57.895 9.46 10.35 35.56 3.33
1701 2804 3.379650 CACGTTGAGTGTTGGAGGT 57.620 52.632 0.00 0.00 45.51 3.85
1773 2876 4.166246 AGGAGGTACGAGTGTGATGATA 57.834 45.455 0.00 0.00 0.00 2.15
1792 2895 4.785453 GCTGCCGGGAGTGGAAGG 62.785 72.222 24.99 0.00 34.92 3.46
1981 3084 3.795688 AGAGTTGATGTTGTGGTGGAT 57.204 42.857 0.00 0.00 0.00 3.41
2010 3113 1.295792 TGAAGACACGGTCAAGCAAC 58.704 50.000 6.78 0.00 34.60 4.17
2024 3127 1.339055 CCGTGATCTTGGGCTTGAAGA 60.339 52.381 0.00 0.00 34.00 2.87
2052 3155 0.887247 TGTTGATCGTTTGGGCATGG 59.113 50.000 0.00 0.00 0.00 3.66
2063 3166 2.276540 GTCGACGACTCAATGTTGATCG 59.723 50.000 20.52 17.67 40.56 3.69
2075 3178 2.296471 AGAGGTTGAAATGTCGACGACT 59.704 45.455 26.86 8.73 38.87 4.18
2076 3179 2.673833 AGAGGTTGAAATGTCGACGAC 58.326 47.619 20.97 20.97 38.87 4.34
2077 3180 3.380479 AAGAGGTTGAAATGTCGACGA 57.620 42.857 11.62 0.00 38.87 4.20
2080 3210 3.581755 CGGTAAGAGGTTGAAATGTCGA 58.418 45.455 0.00 0.00 0.00 4.20
2085 3215 3.329814 AGTTCCCGGTAAGAGGTTGAAAT 59.670 43.478 0.00 0.00 0.00 2.17
2103 3233 1.201343 GAGCTGCGTATCCGAAGTTC 58.799 55.000 0.00 0.00 41.85 3.01
2109 3239 1.452953 TACCTGGAGCTGCGTATCCG 61.453 60.000 0.00 0.00 38.52 4.18
2178 3308 5.616270 TGGTTAAGCAACTGAAGTCATACA 58.384 37.500 4.54 0.00 34.88 2.29
2179 3309 6.554334 TTGGTTAAGCAACTGAAGTCATAC 57.446 37.500 15.83 0.00 34.88 2.39
2216 3350 6.051074 CCTATCATTGTCACATAGTCTGCAA 58.949 40.000 0.00 0.00 0.00 4.08
2274 3408 1.736645 CTCCAGTAACACCACGCCG 60.737 63.158 0.00 0.00 0.00 6.46
2284 3418 2.381911 CCCGGTTACTAGCTCCAGTAA 58.618 52.381 0.00 5.19 38.40 2.24
2330 3464 0.173708 GACTCCACCTCCATCGTCAC 59.826 60.000 0.00 0.00 0.00 3.67
2343 3477 2.962569 CGACCAGAAGCGACTCCA 59.037 61.111 0.00 0.00 0.00 3.86
2435 5102 2.270297 GATGGCCATGTCAACCACGC 62.270 60.000 26.56 0.00 35.99 5.34
2436 5103 1.656818 GGATGGCCATGTCAACCACG 61.657 60.000 26.56 0.00 35.99 4.94
2492 5159 3.777925 CCACGGCGAGCTTGAACG 61.778 66.667 16.62 10.92 0.00 3.95
2548 5215 0.606673 AGCCGCTTGAGAACCCTTTC 60.607 55.000 0.00 0.00 0.00 2.62
2550 5217 1.003233 GAGCCGCTTGAGAACCCTT 60.003 57.895 0.00 0.00 0.00 3.95
2562 5229 3.508840 CCATGGTTTCGGAGCCGC 61.509 66.667 2.57 0.00 39.59 6.53
2564 5231 2.361104 TGCCATGGTTTCGGAGCC 60.361 61.111 14.67 0.00 0.00 4.70
2565 5232 3.056313 GCTGCCATGGTTTCGGAGC 62.056 63.158 14.67 5.08 0.00 4.70
2572 5239 1.795170 GACAACGTGCTGCCATGGTT 61.795 55.000 14.67 0.00 32.11 3.67
2637 5304 0.320247 GAGTGGGATATGCTCCGCAG 60.320 60.000 0.00 0.00 46.01 5.18
2638 5305 1.748403 GAGTGGGATATGCTCCGCA 59.252 57.895 0.00 0.00 46.01 5.69
2639 5306 1.004440 GGAGTGGGATATGCTCCGC 60.004 63.158 0.00 0.00 46.01 5.54
2641 5308 0.034059 CGTGGAGTGGGATATGCTCC 59.966 60.000 0.00 0.00 46.61 4.70
2642 5309 0.034059 CCGTGGAGTGGGATATGCTC 59.966 60.000 0.00 0.00 0.00 4.26
2643 5310 2.044806 GCCGTGGAGTGGGATATGCT 62.045 60.000 0.00 0.00 0.00 3.79
2644 5311 1.598130 GCCGTGGAGTGGGATATGC 60.598 63.158 0.00 0.00 0.00 3.14
2645 5312 1.300931 CGCCGTGGAGTGGGATATG 60.301 63.158 0.00 0.00 0.00 1.78
2646 5313 3.138625 CGCCGTGGAGTGGGATAT 58.861 61.111 0.00 0.00 0.00 1.63
2647 5314 3.845259 GCGCCGTGGAGTGGGATA 61.845 66.667 0.00 0.00 0.00 2.59
2653 5320 4.572571 TTTTGGGCGCCGTGGAGT 62.573 61.111 22.54 0.00 0.00 3.85
2654 5321 3.291383 TTTTTGGGCGCCGTGGAG 61.291 61.111 22.54 0.00 0.00 3.86
2683 5350 4.406003 ACACATAGGGGATGAGTACACTTC 59.594 45.833 0.00 0.00 37.56 3.01
2685 5352 3.995636 ACACATAGGGGATGAGTACACT 58.004 45.455 0.00 0.00 37.56 3.55
2690 5357 2.957006 GACGTACACATAGGGGATGAGT 59.043 50.000 0.00 0.00 41.58 3.41
2708 5375 1.395954 CACAGATCCAAGCATGTGACG 59.604 52.381 4.89 0.00 44.56 4.35
2709 5376 2.430465 ACACAGATCCAAGCATGTGAC 58.570 47.619 15.19 0.00 44.56 3.67
2734 5401 4.272018 GCTCACATGATCACTTCATACACC 59.728 45.833 0.00 0.00 43.40 4.16
2735 5402 4.272018 GGCTCACATGATCACTTCATACAC 59.728 45.833 0.00 0.00 43.40 2.90
2769 5436 2.570415 TCACACCCTTATTTTGCCGA 57.430 45.000 0.00 0.00 0.00 5.54
2778 5445 7.001674 ACAAAACTGAACATATCACACCCTTA 58.998 34.615 0.00 0.00 33.47 2.69
2779 5446 5.833131 ACAAAACTGAACATATCACACCCTT 59.167 36.000 0.00 0.00 33.47 3.95
2794 5462 4.902443 TTGCCGATTACAACAAAACTGA 57.098 36.364 0.00 0.00 0.00 3.41
2795 5463 5.957910 TTTTGCCGATTACAACAAAACTG 57.042 34.783 0.00 0.00 37.15 3.16
2828 5500 7.809665 TGAAAACACATGATCACTTCATACAG 58.190 34.615 0.00 0.00 43.40 2.74
2887 5564 8.784043 ACCACAATAAGACAACAAGTATTTCTC 58.216 33.333 0.00 0.00 33.01 2.87
2903 5580 4.945246 ACCGCTGAGTATACCACAATAAG 58.055 43.478 0.00 0.00 0.00 1.73
2906 5583 3.958798 AGTACCGCTGAGTATACCACAAT 59.041 43.478 0.00 0.00 0.00 2.71
2907 5584 3.359033 AGTACCGCTGAGTATACCACAA 58.641 45.455 0.00 0.00 0.00 3.33
2919 5596 2.203800 TCGCAGATTTAGTACCGCTG 57.796 50.000 0.00 0.00 0.00 5.18
2932 5609 8.200120 CCTCTGATCCATATTAATTATCGCAGA 58.800 37.037 0.00 0.00 45.75 4.26
2933 5610 8.200120 TCCTCTGATCCATATTAATTATCGCAG 58.800 37.037 0.00 0.00 0.00 5.18
2935 5612 8.821894 GTTCCTCTGATCCATATTAATTATCGC 58.178 37.037 0.00 0.00 0.00 4.58
2958 5635 9.803315 ATTTCACAAAAAGAAAAGAGGTAGTTC 57.197 29.630 0.00 0.00 38.36 3.01
2959 5636 9.586435 CATTTCACAAAAAGAAAAGAGGTAGTT 57.414 29.630 0.00 0.00 38.36 2.24
2961 5638 8.413229 TCCATTTCACAAAAAGAAAAGAGGTAG 58.587 33.333 0.00 0.00 38.36 3.18
2965 5642 7.927629 TCCATCCATTTCACAAAAAGAAAAGAG 59.072 33.333 0.00 0.00 38.36 2.85
3052 5845 5.354234 ACTGTCTTAATGCAAATTAGTCGGG 59.646 40.000 0.00 0.00 0.00 5.14
3125 5919 9.453572 TGATTGAAAGCATAAGTATTTGAGAGT 57.546 29.630 0.00 0.00 0.00 3.24
3224 6018 1.331214 ACCTCGTACGGAAGGTGAAA 58.669 50.000 23.56 0.00 32.77 2.69
3359 6154 3.682858 GCAGTTGATAGAGGCGTGTAAAA 59.317 43.478 0.00 0.00 0.00 1.52
3364 6159 1.725641 TTGCAGTTGATAGAGGCGTG 58.274 50.000 0.00 0.00 0.00 5.34
3366 6161 5.065218 ACTTAAATTGCAGTTGATAGAGGCG 59.935 40.000 0.00 0.00 0.00 5.52
3386 6181 9.470399 ACTTCCTCCTTTTCTAAACAAAACTTA 57.530 29.630 0.00 0.00 0.00 2.24
3387 6182 8.251026 CACTTCCTCCTTTTCTAAACAAAACTT 58.749 33.333 0.00 0.00 0.00 2.66
3388 6183 7.630728 GCACTTCCTCCTTTTCTAAACAAAACT 60.631 37.037 0.00 0.00 0.00 2.66
3389 6184 6.475727 GCACTTCCTCCTTTTCTAAACAAAAC 59.524 38.462 0.00 0.00 0.00 2.43
3390 6185 6.153680 TGCACTTCCTCCTTTTCTAAACAAAA 59.846 34.615 0.00 0.00 0.00 2.44
3391 6186 5.654650 TGCACTTCCTCCTTTTCTAAACAAA 59.345 36.000 0.00 0.00 0.00 2.83
3392 6187 5.197451 TGCACTTCCTCCTTTTCTAAACAA 58.803 37.500 0.00 0.00 0.00 2.83
3393 6188 4.787551 TGCACTTCCTCCTTTTCTAAACA 58.212 39.130 0.00 0.00 0.00 2.83
3394 6189 5.767816 TTGCACTTCCTCCTTTTCTAAAC 57.232 39.130 0.00 0.00 0.00 2.01
3395 6190 6.976934 AATTGCACTTCCTCCTTTTCTAAA 57.023 33.333 0.00 0.00 0.00 1.85
3396 6191 6.976934 AAATTGCACTTCCTCCTTTTCTAA 57.023 33.333 0.00 0.00 0.00 2.10
3397 6192 7.724061 ACTTAAATTGCACTTCCTCCTTTTCTA 59.276 33.333 0.00 0.00 0.00 2.10
3398 6193 6.551227 ACTTAAATTGCACTTCCTCCTTTTCT 59.449 34.615 0.00 0.00 0.00 2.52
3399 6194 6.749139 ACTTAAATTGCACTTCCTCCTTTTC 58.251 36.000 0.00 0.00 0.00 2.29
3400 6195 6.731292 ACTTAAATTGCACTTCCTCCTTTT 57.269 33.333 0.00 0.00 0.00 2.27
3401 6196 7.833285 TTACTTAAATTGCACTTCCTCCTTT 57.167 32.000 0.00 0.00 0.00 3.11
3402 6197 9.178758 CTATTACTTAAATTGCACTTCCTCCTT 57.821 33.333 0.00 0.00 0.00 3.36
3403 6198 8.548877 TCTATTACTTAAATTGCACTTCCTCCT 58.451 33.333 0.00 0.00 0.00 3.69
3404 6199 8.613482 GTCTATTACTTAAATTGCACTTCCTCC 58.387 37.037 0.00 0.00 0.00 4.30
3405 6200 8.328864 CGTCTATTACTTAAATTGCACTTCCTC 58.671 37.037 0.00 0.00 0.00 3.71
3406 6201 7.822822 ACGTCTATTACTTAAATTGCACTTCCT 59.177 33.333 0.00 0.00 0.00 3.36
3407 6202 7.971455 ACGTCTATTACTTAAATTGCACTTCC 58.029 34.615 0.00 0.00 0.00 3.46
3456 6251 9.374711 TCTCCCCTTTTATTGTCTTTGTTATTT 57.625 29.630 0.00 0.00 0.00 1.40
3457 6252 8.950007 TCTCCCCTTTTATTGTCTTTGTTATT 57.050 30.769 0.00 0.00 0.00 1.40
3458 6253 9.547279 AATCTCCCCTTTTATTGTCTTTGTTAT 57.453 29.630 0.00 0.00 0.00 1.89
3459 6254 8.950007 AATCTCCCCTTTTATTGTCTTTGTTA 57.050 30.769 0.00 0.00 0.00 2.41
3517 7110 5.873164 TCGCTAAGATAGGAAGTGTTTTTCC 59.127 40.000 0.00 0.00 45.71 3.13
3518 7111 6.963049 TCGCTAAGATAGGAAGTGTTTTTC 57.037 37.500 0.00 0.00 0.00 2.29
3519 7112 7.739498 TTTCGCTAAGATAGGAAGTGTTTTT 57.261 32.000 0.00 0.00 0.00 1.94
3520 7113 7.227910 TGTTTTCGCTAAGATAGGAAGTGTTTT 59.772 33.333 0.00 0.00 0.00 2.43
3521 7114 6.708949 TGTTTTCGCTAAGATAGGAAGTGTTT 59.291 34.615 0.00 0.00 0.00 2.83
3522 7115 6.228258 TGTTTTCGCTAAGATAGGAAGTGTT 58.772 36.000 0.00 0.00 0.00 3.32
3523 7116 5.790593 TGTTTTCGCTAAGATAGGAAGTGT 58.209 37.500 0.00 0.00 0.00 3.55
3524 7117 6.910536 ATGTTTTCGCTAAGATAGGAAGTG 57.089 37.500 0.00 0.00 0.00 3.16
3525 7118 7.783042 AGTATGTTTTCGCTAAGATAGGAAGT 58.217 34.615 0.00 0.00 0.00 3.01
3526 7119 8.649973 AAGTATGTTTTCGCTAAGATAGGAAG 57.350 34.615 0.00 0.00 0.00 3.46
3528 7121 9.909644 GATAAGTATGTTTTCGCTAAGATAGGA 57.090 33.333 0.00 0.00 0.00 2.94
3529 7122 9.141400 GGATAAGTATGTTTTCGCTAAGATAGG 57.859 37.037 0.00 0.00 0.00 2.57
3530 7123 9.915629 AGGATAAGTATGTTTTCGCTAAGATAG 57.084 33.333 0.00 0.00 0.00 2.08
3532 7125 9.262358 GAAGGATAAGTATGTTTTCGCTAAGAT 57.738 33.333 0.00 0.00 0.00 2.40
3533 7126 7.709613 GGAAGGATAAGTATGTTTTCGCTAAGA 59.290 37.037 0.00 0.00 0.00 2.10
3534 7127 7.711339 AGGAAGGATAAGTATGTTTTCGCTAAG 59.289 37.037 0.00 0.00 0.00 2.18
3535 7128 7.562135 AGGAAGGATAAGTATGTTTTCGCTAA 58.438 34.615 0.00 0.00 0.00 3.09
3536 7129 7.120923 AGGAAGGATAAGTATGTTTTCGCTA 57.879 36.000 0.00 0.00 0.00 4.26
3537 7130 5.990668 AGGAAGGATAAGTATGTTTTCGCT 58.009 37.500 0.00 0.00 0.00 4.93
3538 7131 6.315393 TCAAGGAAGGATAAGTATGTTTTCGC 59.685 38.462 0.00 0.00 0.00 4.70
3539 7132 7.843490 TCAAGGAAGGATAAGTATGTTTTCG 57.157 36.000 0.00 0.00 0.00 3.46
3540 7133 9.396022 TCATCAAGGAAGGATAAGTATGTTTTC 57.604 33.333 0.00 0.00 0.00 2.29
3639 7232 8.276325 GTGAAGTATGTGTAGTGTCAGAAAAAG 58.724 37.037 0.00 0.00 0.00 2.27
3640 7233 7.985184 AGTGAAGTATGTGTAGTGTCAGAAAAA 59.015 33.333 0.00 0.00 0.00 1.94
3645 7238 7.817641 TCTTAGTGAAGTATGTGTAGTGTCAG 58.182 38.462 0.00 0.00 34.03 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.