Multiple sequence alignment - TraesCS5D01G081000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G081000 chr5D 100.000 4070 0 0 1 4070 81152210 81148141 0.000000e+00 7516.0
1 TraesCS5D01G081000 chr5A 92.148 2802 131 37 658 3421 77327872 77325122 0.000000e+00 3873.0
2 TraesCS5D01G081000 chr5A 94.461 668 25 5 2778 3440 77324008 77323348 0.000000e+00 1018.0
3 TraesCS5D01G081000 chr5A 94.444 126 7 0 4 129 77328445 77328320 1.150000e-45 195.0
4 TraesCS5D01G081000 chr5B 90.745 1718 87 37 1929 3618 89684699 89683026 0.000000e+00 2226.0
5 TraesCS5D01G081000 chr5B 92.000 1175 47 20 757 1904 89685850 89684696 0.000000e+00 1605.0
6 TraesCS5D01G081000 chr5B 88.971 272 14 6 4 261 89686560 89686291 5.070000e-84 322.0
7 TraesCS5D01G081000 chr5B 89.529 191 13 5 3607 3797 89683009 89682826 6.800000e-58 235.0
8 TraesCS5D01G081000 chr5B 82.305 243 20 9 359 600 89686321 89686101 5.370000e-44 189.0
9 TraesCS5D01G081000 chr4D 97.959 49 1 0 69 117 494068151 494068199 7.250000e-13 86.1
10 TraesCS5D01G081000 chr2B 81.553 103 14 4 2394 2492 383057366 383057265 3.370000e-11 80.5
11 TraesCS5D01G081000 chr4A 86.667 75 4 6 3674 3747 701940656 701940587 1.210000e-10 78.7
12 TraesCS5D01G081000 chr3B 95.833 48 2 0 2411 2458 132656571 132656618 1.210000e-10 78.7
13 TraesCS5D01G081000 chr3A 95.833 48 2 0 2411 2458 99995319 99995272 1.210000e-10 78.7
14 TraesCS5D01G081000 chr2A 81.188 101 15 3 2394 2492 420226766 420226864 1.210000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G081000 chr5D 81148141 81152210 4069 True 7516.000000 7516 100.000000 1 4070 1 chr5D.!!$R1 4069
1 TraesCS5D01G081000 chr5A 77323348 77328445 5097 True 1695.333333 3873 93.684333 4 3440 3 chr5A.!!$R1 3436
2 TraesCS5D01G081000 chr5B 89682826 89686560 3734 True 915.400000 2226 88.710000 4 3797 5 chr5B.!!$R1 3793

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
632 835 0.698238 ACTGGGCAGCTTGGTAATCA 59.302 50.0 0.0 0.0 0.0 2.57 F
899 1198 0.719015 TCTCCATTCCCACTCCTCCT 59.281 55.0 0.0 0.0 0.0 3.69 F
1681 2012 0.112412 AGGTGGAATTTTCTGGCGGT 59.888 50.0 0.0 0.0 0.0 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1577 1900 0.033109 ATGCCTCTACCTTTTGGGCC 60.033 55.0 0.00 0.00 46.08 5.80 R
2028 2376 1.243902 TTGACATCTGAAAACCCGCC 58.756 50.0 0.00 0.00 0.00 6.13 R
3652 5801 0.181114 GCTGATGTGGATGGCCTACA 59.819 55.0 3.32 4.67 34.31 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.419580 TAGAGGGGGCCCGTCGTA 61.420 66.667 33.13 23.69 42.50 3.43
125 133 2.815647 CGAAACGCCTCTGCCTCC 60.816 66.667 0.00 0.00 0.00 4.30
193 203 0.977395 CTTTTCTCCGACTCCCACCT 59.023 55.000 0.00 0.00 0.00 4.00
199 209 4.715130 CGACTCCCACCTCCCCCA 62.715 72.222 0.00 0.00 0.00 4.96
200 210 2.042930 GACTCCCACCTCCCCCAT 59.957 66.667 0.00 0.00 0.00 4.00
207 220 0.707616 CCACCTCCCCCATTTTACCA 59.292 55.000 0.00 0.00 0.00 3.25
218 231 2.034124 CATTTTACCATCCTGCCCCTG 58.966 52.381 0.00 0.00 0.00 4.45
230 243 3.026847 CCCCTGCCACCCCCATAA 61.027 66.667 0.00 0.00 0.00 1.90
237 434 0.908198 GCCACCCCCATAAATGCAAA 59.092 50.000 0.00 0.00 0.00 3.68
240 437 1.905215 CACCCCCATAAATGCAAACCA 59.095 47.619 0.00 0.00 0.00 3.67
267 464 9.896645 TCCATGGCAAAAATAATAATAAAAGCA 57.103 25.926 6.96 0.00 0.00 3.91
297 499 7.964604 AGTACTCAACAAAATCCTACTCAAC 57.035 36.000 0.00 0.00 0.00 3.18
306 508 8.871686 ACAAAATCCTACTCAACAAAATGTTC 57.128 30.769 0.00 0.00 38.77 3.18
339 541 9.990360 TCATTGTAAAATCTTCACTAGTGTGTA 57.010 29.630 21.99 9.18 44.14 2.90
341 543 9.772973 ATTGTAAAATCTTCACTAGTGTGTACA 57.227 29.630 21.99 14.43 44.14 2.90
342 544 9.772973 TTGTAAAATCTTCACTAGTGTGTACAT 57.227 29.630 21.99 6.30 44.14 2.29
350 552 8.857098 TCTTCACTAGTGTGTACATAAGAAAGT 58.143 33.333 21.99 0.00 44.14 2.66
357 559 8.912787 AGTGTGTACATAAGAAAGTATCTTCG 57.087 34.615 0.00 0.00 45.42 3.79
370 572 6.811253 AAGTATCTTCGTAAATGCAAACCA 57.189 33.333 0.00 0.00 0.00 3.67
372 574 7.016361 AGTATCTTCGTAAATGCAAACCATC 57.984 36.000 0.00 0.00 31.43 3.51
409 612 9.588096 AAGAGTATTTCTCCACCTAAAAATTGT 57.412 29.630 0.00 0.00 43.71 2.71
440 643 8.640063 TTGTATACCCTCTTGCGTATATAAGA 57.360 34.615 0.00 0.00 31.81 2.10
442 645 9.081204 TGTATACCCTCTTGCGTATATAAGAAA 57.919 33.333 0.00 0.00 32.96 2.52
466 669 8.828688 AAAAAGATTACCACTACTAGTGTGTC 57.171 34.615 14.00 11.92 44.50 3.67
467 670 6.527057 AAGATTACCACTACTAGTGTGTCC 57.473 41.667 14.00 6.26 44.50 4.02
469 672 6.966751 AGATTACCACTACTAGTGTGTCCTA 58.033 40.000 14.00 7.27 44.50 2.94
470 673 6.827762 AGATTACCACTACTAGTGTGTCCTAC 59.172 42.308 14.00 10.31 44.50 3.18
471 674 4.654389 ACCACTACTAGTGTGTCCTACT 57.346 45.455 14.00 0.00 44.50 2.57
472 675 4.587891 ACCACTACTAGTGTGTCCTACTC 58.412 47.826 14.00 0.00 44.50 2.59
473 676 4.042560 ACCACTACTAGTGTGTCCTACTCA 59.957 45.833 14.00 0.00 44.50 3.41
474 677 5.008331 CCACTACTAGTGTGTCCTACTCAA 58.992 45.833 14.00 0.00 44.50 3.02
475 678 5.106237 CCACTACTAGTGTGTCCTACTCAAC 60.106 48.000 14.00 0.00 44.50 3.18
476 679 5.472478 CACTACTAGTGTGTCCTACTCAACA 59.528 44.000 5.39 0.00 41.19 3.33
477 680 6.016527 CACTACTAGTGTGTCCTACTCAACAA 60.017 42.308 5.39 0.00 41.19 2.83
478 681 5.864418 ACTAGTGTGTCCTACTCAACAAA 57.136 39.130 0.00 0.00 0.00 2.83
479 682 6.229936 ACTAGTGTGTCCTACTCAACAAAA 57.770 37.500 0.00 0.00 0.00 2.44
480 683 6.827727 ACTAGTGTGTCCTACTCAACAAAAT 58.172 36.000 0.00 0.00 0.00 1.82
481 684 6.706270 ACTAGTGTGTCCTACTCAACAAAATG 59.294 38.462 0.00 0.00 0.00 2.32
482 685 5.437060 AGTGTGTCCTACTCAACAAAATGT 58.563 37.500 0.00 0.00 0.00 2.71
483 686 5.885912 AGTGTGTCCTACTCAACAAAATGTT 59.114 36.000 0.00 0.00 42.08 2.71
484 687 6.038271 AGTGTGTCCTACTCAACAAAATGTTC 59.962 38.462 0.00 0.00 38.77 3.18
500 703 7.281100 ACAAAATGTTCTTTATTCCCGCAAAAA 59.719 29.630 0.00 0.00 0.00 1.94
611 814 9.220767 ACCAACTTCTACAATTAGCTAGAAAAG 57.779 33.333 0.00 0.00 30.35 2.27
628 831 2.034066 GCACTGGGCAGCTTGGTA 59.966 61.111 0.00 0.00 43.97 3.25
629 832 1.603455 GCACTGGGCAGCTTGGTAA 60.603 57.895 0.00 0.00 43.97 2.85
630 833 0.967380 GCACTGGGCAGCTTGGTAAT 60.967 55.000 0.00 0.00 43.97 1.89
631 834 1.098050 CACTGGGCAGCTTGGTAATC 58.902 55.000 0.00 0.00 0.00 1.75
632 835 0.698238 ACTGGGCAGCTTGGTAATCA 59.302 50.000 0.00 0.00 0.00 2.57
633 836 1.075374 ACTGGGCAGCTTGGTAATCAA 59.925 47.619 0.00 0.00 0.00 2.57
634 837 1.474077 CTGGGCAGCTTGGTAATCAAC 59.526 52.381 0.00 0.00 0.00 3.18
647 850 5.722021 GGTAATCAACCCTGTGAATTGTT 57.278 39.130 0.00 0.00 43.16 2.83
648 851 6.096673 GGTAATCAACCCTGTGAATTGTTT 57.903 37.500 0.00 0.00 43.16 2.83
649 852 6.156519 GGTAATCAACCCTGTGAATTGTTTC 58.843 40.000 0.00 0.00 43.16 2.78
650 853 4.871933 ATCAACCCTGTGAATTGTTTCC 57.128 40.909 0.00 0.00 0.00 3.13
651 854 2.962421 TCAACCCTGTGAATTGTTTCCC 59.038 45.455 0.00 0.00 0.00 3.97
652 855 1.616159 ACCCTGTGAATTGTTTCCCG 58.384 50.000 0.00 0.00 0.00 5.14
653 856 1.133606 ACCCTGTGAATTGTTTCCCGT 60.134 47.619 0.00 0.00 0.00 5.28
654 857 1.269448 CCCTGTGAATTGTTTCCCGTG 59.731 52.381 0.00 0.00 0.00 4.94
655 858 2.226330 CCTGTGAATTGTTTCCCGTGA 58.774 47.619 0.00 0.00 0.00 4.35
656 859 2.031157 CCTGTGAATTGTTTCCCGTGAC 60.031 50.000 0.00 0.00 0.00 3.67
657 860 2.616376 CTGTGAATTGTTTCCCGTGACA 59.384 45.455 0.00 0.00 0.00 3.58
658 861 3.017442 TGTGAATTGTTTCCCGTGACAA 58.983 40.909 0.00 0.00 39.78 3.18
659 862 3.444034 TGTGAATTGTTTCCCGTGACAAA 59.556 39.130 0.00 0.00 39.03 2.83
660 863 4.082190 TGTGAATTGTTTCCCGTGACAAAA 60.082 37.500 0.00 0.00 39.03 2.44
661 864 4.865365 GTGAATTGTTTCCCGTGACAAAAA 59.135 37.500 0.00 0.00 39.03 1.94
662 865 4.865365 TGAATTGTTTCCCGTGACAAAAAC 59.135 37.500 0.00 0.00 39.03 2.43
663 866 2.943449 TGTTTCCCGTGACAAAAACC 57.057 45.000 0.00 0.00 32.04 3.27
664 867 2.168496 TGTTTCCCGTGACAAAAACCA 58.832 42.857 0.00 0.00 32.04 3.67
665 868 2.164624 TGTTTCCCGTGACAAAAACCAG 59.835 45.455 0.00 0.00 32.04 4.00
674 877 4.499040 CGTGACAAAAACCAGTGAATTGTC 59.501 41.667 16.56 16.56 46.20 3.18
686 889 8.006298 ACCAGTGAATTGTCAACAAAGATTTA 57.994 30.769 0.00 0.00 39.55 1.40
751 957 3.307059 GCAGTAGGGAGCAAGAAAGAAGA 60.307 47.826 0.00 0.00 0.00 2.87
785 1082 3.732470 GGACGATTCCATTCGCCC 58.268 61.111 0.00 0.00 42.82 6.13
787 1084 2.203015 ACGATTCCATTCGCCCCG 60.203 61.111 0.00 0.00 42.82 5.73
788 1085 2.972505 CGATTCCATTCGCCCCGG 60.973 66.667 0.00 0.00 31.60 5.73
789 1086 3.287520 GATTCCATTCGCCCCGGC 61.288 66.667 0.00 0.00 37.85 6.13
790 1087 4.894896 ATTCCATTCGCCCCGGCC 62.895 66.667 0.00 0.00 37.98 6.13
897 1196 1.419387 CCATCTCCATTCCCACTCCTC 59.581 57.143 0.00 0.00 0.00 3.71
899 1198 0.719015 TCTCCATTCCCACTCCTCCT 59.281 55.000 0.00 0.00 0.00 3.69
903 1205 1.625228 CCATTCCCACTCCTCCTACCA 60.625 57.143 0.00 0.00 0.00 3.25
983 1292 4.722535 TGCGGGGAGAGGGAGCTT 62.723 66.667 0.00 0.00 0.00 3.74
985 1294 2.904131 CGGGGAGAGGGAGCTTTC 59.096 66.667 0.00 0.00 0.00 2.62
1577 1900 2.238245 GCGACAGCATCAAGAAACAG 57.762 50.000 0.00 0.00 44.35 3.16
1593 1916 0.698818 ACAGGCCCAAAAGGTAGAGG 59.301 55.000 0.00 0.00 38.26 3.69
1639 1962 3.045601 CGAAAGGAGATGTGGTCAGTT 57.954 47.619 0.00 0.00 0.00 3.16
1640 1963 2.996621 CGAAAGGAGATGTGGTCAGTTC 59.003 50.000 0.00 0.00 0.00 3.01
1641 1964 3.554960 CGAAAGGAGATGTGGTCAGTTCA 60.555 47.826 0.00 0.00 0.00 3.18
1642 1965 4.389374 GAAAGGAGATGTGGTCAGTTCAA 58.611 43.478 0.00 0.00 0.00 2.69
1643 1966 4.437682 AAGGAGATGTGGTCAGTTCAAA 57.562 40.909 0.00 0.00 0.00 2.69
1644 1967 4.647564 AGGAGATGTGGTCAGTTCAAAT 57.352 40.909 0.00 0.00 0.00 2.32
1645 1968 4.990526 AGGAGATGTGGTCAGTTCAAATT 58.009 39.130 0.00 0.00 0.00 1.82
1646 1969 6.126863 AGGAGATGTGGTCAGTTCAAATTA 57.873 37.500 0.00 0.00 0.00 1.40
1678 2009 1.534729 ACGAGGTGGAATTTTCTGGC 58.465 50.000 0.00 0.00 0.00 4.85
1679 2010 0.447801 CGAGGTGGAATTTTCTGGCG 59.552 55.000 0.00 0.00 0.00 5.69
1681 2012 0.112412 AGGTGGAATTTTCTGGCGGT 59.888 50.000 0.00 0.00 0.00 5.68
1682 2013 0.966179 GGTGGAATTTTCTGGCGGTT 59.034 50.000 0.00 0.00 0.00 4.44
1683 2014 1.343142 GGTGGAATTTTCTGGCGGTTT 59.657 47.619 0.00 0.00 0.00 3.27
1684 2015 2.559231 GGTGGAATTTTCTGGCGGTTTA 59.441 45.455 0.00 0.00 0.00 2.01
1685 2016 3.194755 GGTGGAATTTTCTGGCGGTTTAT 59.805 43.478 0.00 0.00 0.00 1.40
1750 2082 9.838339 TTTAATTAAGATTGTTTTGCAAAGGGA 57.162 25.926 12.41 2.61 40.91 4.20
1816 2155 9.903682 AAAAGTTGTATGATGTTCAAGAATGAG 57.096 29.630 0.00 0.00 36.78 2.90
1952 2292 3.305199 GCTCTTTCAGCTCATTTGCAGTT 60.305 43.478 0.00 0.00 45.83 3.16
2005 2351 2.631418 CAAGATGGCTTGTCTTGCTG 57.369 50.000 12.43 0.00 44.07 4.41
2041 2389 0.397254 TTTTGGGGCGGGTTTTCAGA 60.397 50.000 0.00 0.00 0.00 3.27
2057 2405 7.169813 GGGTTTTCAGATGTCAATGTTTTCTTC 59.830 37.037 0.00 0.00 0.00 2.87
2137 2491 5.455056 TCTCCTTAGCTCATATTCGGAAC 57.545 43.478 0.00 0.00 0.00 3.62
2188 2542 8.549548 GTCTACCTGTTTCTTGTTTCTAACTTC 58.450 37.037 0.00 0.00 0.00 3.01
2189 2543 8.262227 TCTACCTGTTTCTTGTTTCTAACTTCA 58.738 33.333 0.00 0.00 0.00 3.02
2199 2553 8.956426 TCTTGTTTCTAACTTCAGTTGTCAATT 58.044 29.630 2.26 0.00 38.90 2.32
2200 2554 9.226345 CTTGTTTCTAACTTCAGTTGTCAATTC 57.774 33.333 2.26 0.00 38.90 2.17
2503 2858 1.604593 CAAGGTGGGGGTTGAGCAG 60.605 63.158 0.00 0.00 0.00 4.24
2510 2865 1.202879 TGGGGGTTGAGCAGTTTGTAG 60.203 52.381 0.00 0.00 0.00 2.74
2512 2867 2.152016 GGGGTTGAGCAGTTTGTAGAC 58.848 52.381 0.00 0.00 0.00 2.59
2537 2892 5.293814 CACATTGTTTGTTGGAATGCTTTGA 59.706 36.000 0.00 0.00 36.00 2.69
2577 2932 1.334960 CGTGGTTGGTGTGCTGAAATC 60.335 52.381 0.00 0.00 0.00 2.17
2707 3062 9.645059 TCTTATTAACTTCTGTCTGTTCATCAG 57.355 33.333 0.00 0.00 44.85 2.90
2708 3063 8.777865 TTATTAACTTCTGTCTGTTCATCAGG 57.222 34.615 0.00 0.00 43.76 3.86
2722 3085 8.704668 TCTGTTCATCAGGCTAATCTACAATTA 58.295 33.333 0.00 0.00 43.76 1.40
2738 3101 5.675684 ACAATTATCCATGTTTCCAACCC 57.324 39.130 0.00 0.00 0.00 4.11
2742 3105 2.230130 TCCATGTTTCCAACCCCATC 57.770 50.000 0.00 0.00 0.00 3.51
2901 3264 3.168604 CACAGCTCGTCGCAGTCG 61.169 66.667 0.00 0.00 42.61 4.18
3003 5112 2.661718 GAGGAGAACGAAGAGGAGGAT 58.338 52.381 0.00 0.00 0.00 3.24
3042 5151 1.453379 CTGGGGGATGCAGCAGAAG 60.453 63.158 3.51 0.00 0.00 2.85
3133 5242 2.288666 CAGCAACACCAACACACTACT 58.711 47.619 0.00 0.00 0.00 2.57
3214 5330 3.627577 TGAGAGGTGTGTTCTTTTTGAGC 59.372 43.478 0.00 0.00 0.00 4.26
3264 5380 2.179589 CGTGAGTCGTTGGGTTATACG 58.820 52.381 0.00 0.00 39.03 3.06
3265 5381 2.414559 CGTGAGTCGTTGGGTTATACGT 60.415 50.000 0.00 0.00 38.79 3.57
3266 5382 3.181511 CGTGAGTCGTTGGGTTATACGTA 60.182 47.826 0.00 0.00 38.79 3.57
3267 5383 4.098416 GTGAGTCGTTGGGTTATACGTAC 58.902 47.826 0.00 0.00 38.79 3.67
3286 5402 9.893634 ATACGTACTGTATTAGAGATATGAGCT 57.106 33.333 0.00 0.00 41.01 4.09
3366 5484 2.475466 GCACTCCATGGCATCCACG 61.475 63.158 6.96 0.00 35.80 4.94
3441 5560 8.314021 TCATCCTATGCTACAACACTAATATGG 58.686 37.037 0.00 0.00 0.00 2.74
3442 5561 7.849322 TCCTATGCTACAACACTAATATGGA 57.151 36.000 0.00 0.00 0.00 3.41
3443 5562 7.896811 TCCTATGCTACAACACTAATATGGAG 58.103 38.462 0.00 0.00 0.00 3.86
3495 5614 4.992319 CGCGATAAACCAAGGGTAATATCA 59.008 41.667 0.00 0.00 35.85 2.15
3497 5616 5.995897 GCGATAAACCAAGGGTAATATCACT 59.004 40.000 15.57 0.00 35.85 3.41
3498 5617 7.156673 GCGATAAACCAAGGGTAATATCACTA 58.843 38.462 15.57 0.00 35.85 2.74
3499 5618 7.331193 GCGATAAACCAAGGGTAATATCACTAG 59.669 40.741 15.57 0.00 35.85 2.57
3503 5622 7.691993 AACCAAGGGTAATATCACTAGATGT 57.308 36.000 0.00 0.00 33.12 3.06
3504 5623 7.304497 ACCAAGGGTAATATCACTAGATGTC 57.696 40.000 0.00 0.00 32.71 3.06
3505 5624 6.844388 ACCAAGGGTAATATCACTAGATGTCA 59.156 38.462 0.00 0.00 32.71 3.58
3506 5625 7.155328 CCAAGGGTAATATCACTAGATGTCAC 58.845 42.308 0.00 0.00 35.67 3.67
3507 5626 7.202001 CCAAGGGTAATATCACTAGATGTCACA 60.202 40.741 0.00 0.00 35.67 3.58
3508 5627 8.370940 CAAGGGTAATATCACTAGATGTCACAT 58.629 37.037 0.00 0.00 35.67 3.21
3509 5628 7.901029 AGGGTAATATCACTAGATGTCACATG 58.099 38.462 0.00 0.00 35.67 3.21
3510 5629 6.591834 GGGTAATATCACTAGATGTCACATGC 59.408 42.308 0.00 0.00 35.67 4.06
3519 5638 4.541973 AGATGTCACATGCTGTTAGTGA 57.458 40.909 0.00 0.00 39.74 3.41
3571 5690 6.471942 TTTTAGAAAGGGGGATTACCTCAA 57.528 37.500 0.00 0.00 44.86 3.02
3575 5696 0.046397 AGGGGGATTACCTCAAGCCT 59.954 55.000 0.00 0.00 44.86 4.58
3587 5708 3.137913 ACCTCAAGCCTCTGCATCATTAT 59.862 43.478 0.00 0.00 41.13 1.28
3588 5709 3.502595 CCTCAAGCCTCTGCATCATTATG 59.497 47.826 0.00 0.00 41.13 1.90
3637 5786 8.758834 ATCTAAATAGAAGCCCCCTACTATTT 57.241 34.615 0.00 0.00 43.34 1.40
3648 5797 5.532779 GCCCCCTACTATTTGATTTCTCTTG 59.467 44.000 0.00 0.00 0.00 3.02
3649 5798 6.064717 CCCCCTACTATTTGATTTCTCTTGG 58.935 44.000 0.00 0.00 0.00 3.61
3650 5799 5.532779 CCCCTACTATTTGATTTCTCTTGGC 59.467 44.000 0.00 0.00 0.00 4.52
3651 5800 6.122277 CCCTACTATTTGATTTCTCTTGGCA 58.878 40.000 0.00 0.00 0.00 4.92
3652 5801 6.774656 CCCTACTATTTGATTTCTCTTGGCAT 59.225 38.462 0.00 0.00 0.00 4.40
3653 5802 7.255381 CCCTACTATTTGATTTCTCTTGGCATG 60.255 40.741 0.00 0.00 0.00 4.06
3654 5803 7.284034 CCTACTATTTGATTTCTCTTGGCATGT 59.716 37.037 0.00 0.00 0.00 3.21
3655 5804 9.330063 CTACTATTTGATTTCTCTTGGCATGTA 57.670 33.333 0.00 0.00 0.00 2.29
3656 5805 8.218338 ACTATTTGATTTCTCTTGGCATGTAG 57.782 34.615 0.00 0.00 0.00 2.74
3657 5806 5.902613 TTTGATTTCTCTTGGCATGTAGG 57.097 39.130 0.00 0.00 0.00 3.18
3694 5843 1.985159 TCAACATGTAGCCTTCCACCT 59.015 47.619 0.00 0.00 0.00 4.00
3703 5852 3.175438 AGCCTTCCACCTAAGCAAATT 57.825 42.857 0.00 0.00 0.00 1.82
3735 5884 9.586435 CCTCAACAGTTCTATTTGTTTTTCTTT 57.414 29.630 0.00 0.00 35.46 2.52
3783 5932 1.525995 CCCCGTCACACTGTTTGCT 60.526 57.895 0.00 0.00 0.00 3.91
3797 5946 0.480690 TTTGCTGCCCCTTCCACTTA 59.519 50.000 0.00 0.00 0.00 2.24
3798 5947 0.704076 TTGCTGCCCCTTCCACTTAT 59.296 50.000 0.00 0.00 0.00 1.73
3799 5948 0.704076 TGCTGCCCCTTCCACTTATT 59.296 50.000 0.00 0.00 0.00 1.40
3800 5949 1.106285 GCTGCCCCTTCCACTTATTG 58.894 55.000 0.00 0.00 0.00 1.90
3801 5950 1.106285 CTGCCCCTTCCACTTATTGC 58.894 55.000 0.00 0.00 0.00 3.56
3802 5951 0.324275 TGCCCCTTCCACTTATTGCC 60.324 55.000 0.00 0.00 0.00 4.52
3803 5952 0.033109 GCCCCTTCCACTTATTGCCT 60.033 55.000 0.00 0.00 0.00 4.75
3804 5953 2.024306 GCCCCTTCCACTTATTGCCTC 61.024 57.143 0.00 0.00 0.00 4.70
3805 5954 1.566231 CCCCTTCCACTTATTGCCTCT 59.434 52.381 0.00 0.00 0.00 3.69
3806 5955 2.024941 CCCCTTCCACTTATTGCCTCTT 60.025 50.000 0.00 0.00 0.00 2.85
3807 5956 3.282885 CCCTTCCACTTATTGCCTCTTC 58.717 50.000 0.00 0.00 0.00 2.87
3808 5957 3.308402 CCCTTCCACTTATTGCCTCTTCA 60.308 47.826 0.00 0.00 0.00 3.02
3809 5958 4.530875 CCTTCCACTTATTGCCTCTTCAT 58.469 43.478 0.00 0.00 0.00 2.57
3810 5959 4.952335 CCTTCCACTTATTGCCTCTTCATT 59.048 41.667 0.00 0.00 0.00 2.57
3811 5960 6.122277 CCTTCCACTTATTGCCTCTTCATTA 58.878 40.000 0.00 0.00 0.00 1.90
3812 5961 6.261826 CCTTCCACTTATTGCCTCTTCATTAG 59.738 42.308 0.00 0.00 0.00 1.73
3813 5962 6.560003 TCCACTTATTGCCTCTTCATTAGA 57.440 37.500 0.00 0.00 0.00 2.10
3814 5963 6.349300 TCCACTTATTGCCTCTTCATTAGAC 58.651 40.000 0.00 0.00 0.00 2.59
3815 5964 5.235186 CCACTTATTGCCTCTTCATTAGACG 59.765 44.000 0.00 0.00 0.00 4.18
3816 5965 5.235186 CACTTATTGCCTCTTCATTAGACGG 59.765 44.000 0.00 0.00 0.00 4.79
3817 5966 3.914426 ATTGCCTCTTCATTAGACGGT 57.086 42.857 0.00 0.00 0.00 4.83
3818 5967 3.695830 TTGCCTCTTCATTAGACGGTT 57.304 42.857 0.00 0.00 0.00 4.44
3819 5968 3.247006 TGCCTCTTCATTAGACGGTTC 57.753 47.619 0.00 0.00 0.00 3.62
3820 5969 2.093658 TGCCTCTTCATTAGACGGTTCC 60.094 50.000 0.00 0.00 0.00 3.62
3821 5970 2.168728 GCCTCTTCATTAGACGGTTCCT 59.831 50.000 0.00 0.00 0.00 3.36
3822 5971 3.369576 GCCTCTTCATTAGACGGTTCCTT 60.370 47.826 0.00 0.00 0.00 3.36
3823 5972 4.434520 CCTCTTCATTAGACGGTTCCTTC 58.565 47.826 0.00 0.00 0.00 3.46
3824 5973 4.434520 CTCTTCATTAGACGGTTCCTTCC 58.565 47.826 0.00 0.00 0.00 3.46
3825 5974 3.835978 TCTTCATTAGACGGTTCCTTCCA 59.164 43.478 0.00 0.00 0.00 3.53
3826 5975 4.469945 TCTTCATTAGACGGTTCCTTCCAT 59.530 41.667 0.00 0.00 0.00 3.41
3827 5976 4.402056 TCATTAGACGGTTCCTTCCATC 57.598 45.455 0.00 0.00 0.00 3.51
3828 5977 4.030913 TCATTAGACGGTTCCTTCCATCT 58.969 43.478 0.00 0.00 34.34 2.90
3829 5978 4.099573 TCATTAGACGGTTCCTTCCATCTC 59.900 45.833 0.00 0.00 32.18 2.75
3830 5979 1.196012 AGACGGTTCCTTCCATCTCC 58.804 55.000 0.00 0.00 0.00 3.71
3831 5980 0.178301 GACGGTTCCTTCCATCTCCC 59.822 60.000 0.00 0.00 0.00 4.30
3832 5981 0.252742 ACGGTTCCTTCCATCTCCCT 60.253 55.000 0.00 0.00 0.00 4.20
3833 5982 0.466124 CGGTTCCTTCCATCTCCCTC 59.534 60.000 0.00 0.00 0.00 4.30
3834 5983 0.840617 GGTTCCTTCCATCTCCCTCC 59.159 60.000 0.00 0.00 0.00 4.30
3835 5984 1.584724 GTTCCTTCCATCTCCCTCCA 58.415 55.000 0.00 0.00 0.00 3.86
3836 5985 1.210722 GTTCCTTCCATCTCCCTCCAC 59.789 57.143 0.00 0.00 0.00 4.02
3837 5986 0.326618 TCCTTCCATCTCCCTCCACC 60.327 60.000 0.00 0.00 0.00 4.61
3838 5987 0.621571 CCTTCCATCTCCCTCCACCA 60.622 60.000 0.00 0.00 0.00 4.17
3839 5988 1.289160 CTTCCATCTCCCTCCACCAA 58.711 55.000 0.00 0.00 0.00 3.67
3840 5989 1.849039 CTTCCATCTCCCTCCACCAAT 59.151 52.381 0.00 0.00 0.00 3.16
3841 5990 2.887454 TCCATCTCCCTCCACCAATA 57.113 50.000 0.00 0.00 0.00 1.90
3842 5991 3.144068 TCCATCTCCCTCCACCAATAA 57.856 47.619 0.00 0.00 0.00 1.40
3843 5992 3.469859 TCCATCTCCCTCCACCAATAAA 58.530 45.455 0.00 0.00 0.00 1.40
3844 5993 4.054369 TCCATCTCCCTCCACCAATAAAT 58.946 43.478 0.00 0.00 0.00 1.40
3845 5994 4.104738 TCCATCTCCCTCCACCAATAAATC 59.895 45.833 0.00 0.00 0.00 2.17
3846 5995 4.105377 CCATCTCCCTCCACCAATAAATCT 59.895 45.833 0.00 0.00 0.00 2.40
3847 5996 5.312079 CATCTCCCTCCACCAATAAATCTC 58.688 45.833 0.00 0.00 0.00 2.75
3848 5997 3.716872 TCTCCCTCCACCAATAAATCTCC 59.283 47.826 0.00 0.00 0.00 3.71
3849 5998 3.459598 CTCCCTCCACCAATAAATCTCCA 59.540 47.826 0.00 0.00 0.00 3.86
3850 5999 3.855599 TCCCTCCACCAATAAATCTCCAA 59.144 43.478 0.00 0.00 0.00 3.53
3851 6000 3.954258 CCCTCCACCAATAAATCTCCAAC 59.046 47.826 0.00 0.00 0.00 3.77
3852 6001 4.569653 CCCTCCACCAATAAATCTCCAACA 60.570 45.833 0.00 0.00 0.00 3.33
3853 6002 5.203528 CCTCCACCAATAAATCTCCAACAT 58.796 41.667 0.00 0.00 0.00 2.71
3854 6003 5.658190 CCTCCACCAATAAATCTCCAACATT 59.342 40.000 0.00 0.00 0.00 2.71
3855 6004 6.406177 CCTCCACCAATAAATCTCCAACATTG 60.406 42.308 0.00 0.00 0.00 2.82
3856 6005 6.015918 TCCACCAATAAATCTCCAACATTGT 58.984 36.000 0.00 0.00 0.00 2.71
3857 6006 6.152661 TCCACCAATAAATCTCCAACATTGTC 59.847 38.462 0.00 0.00 0.00 3.18
3858 6007 6.153340 CCACCAATAAATCTCCAACATTGTCT 59.847 38.462 0.00 0.00 0.00 3.41
3859 6008 7.309990 CCACCAATAAATCTCCAACATTGTCTT 60.310 37.037 0.00 0.00 0.00 3.01
3860 6009 8.090214 CACCAATAAATCTCCAACATTGTCTTT 58.910 33.333 0.00 0.00 0.00 2.52
3861 6010 8.650490 ACCAATAAATCTCCAACATTGTCTTTT 58.350 29.630 0.00 0.00 0.00 2.27
3862 6011 8.928733 CCAATAAATCTCCAACATTGTCTTTTG 58.071 33.333 0.00 0.00 0.00 2.44
3863 6012 9.695526 CAATAAATCTCCAACATTGTCTTTTGA 57.304 29.630 0.00 0.00 0.00 2.69
3866 6015 8.822652 AAATCTCCAACATTGTCTTTTGATTC 57.177 30.769 0.00 0.00 0.00 2.52
3867 6016 7.771927 ATCTCCAACATTGTCTTTTGATTCT 57.228 32.000 0.00 0.00 0.00 2.40
3868 6017 7.587037 TCTCCAACATTGTCTTTTGATTCTT 57.413 32.000 0.00 0.00 0.00 2.52
3869 6018 7.651808 TCTCCAACATTGTCTTTTGATTCTTC 58.348 34.615 0.00 0.00 0.00 2.87
3870 6019 7.503566 TCTCCAACATTGTCTTTTGATTCTTCT 59.496 33.333 0.00 0.00 0.00 2.85
3871 6020 7.651808 TCCAACATTGTCTTTTGATTCTTCTC 58.348 34.615 0.00 0.00 0.00 2.87
3872 6021 6.865205 CCAACATTGTCTTTTGATTCTTCTCC 59.135 38.462 0.00 0.00 0.00 3.71
3873 6022 7.255730 CCAACATTGTCTTTTGATTCTTCTCCT 60.256 37.037 0.00 0.00 0.00 3.69
3874 6023 7.830099 ACATTGTCTTTTGATTCTTCTCCTT 57.170 32.000 0.00 0.00 0.00 3.36
3875 6024 8.242729 ACATTGTCTTTTGATTCTTCTCCTTT 57.757 30.769 0.00 0.00 0.00 3.11
3876 6025 9.354673 ACATTGTCTTTTGATTCTTCTCCTTTA 57.645 29.630 0.00 0.00 0.00 1.85
3883 6032 9.631452 CTTTTGATTCTTCTCCTTTATTTGTCC 57.369 33.333 0.00 0.00 0.00 4.02
3884 6033 7.703058 TTGATTCTTCTCCTTTATTTGTCCC 57.297 36.000 0.00 0.00 0.00 4.46
3885 6034 6.789268 TGATTCTTCTCCTTTATTTGTCCCA 58.211 36.000 0.00 0.00 0.00 4.37
3886 6035 6.659242 TGATTCTTCTCCTTTATTTGTCCCAC 59.341 38.462 0.00 0.00 0.00 4.61
3887 6036 5.843019 TCTTCTCCTTTATTTGTCCCACT 57.157 39.130 0.00 0.00 0.00 4.00
3888 6037 6.945636 TCTTCTCCTTTATTTGTCCCACTA 57.054 37.500 0.00 0.00 0.00 2.74
3889 6038 7.510675 TCTTCTCCTTTATTTGTCCCACTAT 57.489 36.000 0.00 0.00 0.00 2.12
3890 6039 7.565680 TCTTCTCCTTTATTTGTCCCACTATC 58.434 38.462 0.00 0.00 0.00 2.08
3891 6040 6.248569 TCTCCTTTATTTGTCCCACTATCC 57.751 41.667 0.00 0.00 0.00 2.59
3892 6041 5.729229 TCTCCTTTATTTGTCCCACTATCCA 59.271 40.000 0.00 0.00 0.00 3.41
3893 6042 6.389869 TCTCCTTTATTTGTCCCACTATCCAT 59.610 38.462 0.00 0.00 0.00 3.41
3894 6043 7.570982 TCTCCTTTATTTGTCCCACTATCCATA 59.429 37.037 0.00 0.00 0.00 2.74
3895 6044 8.108378 TCCTTTATTTGTCCCACTATCCATAA 57.892 34.615 0.00 0.00 0.00 1.90
3896 6045 7.996644 TCCTTTATTTGTCCCACTATCCATAAC 59.003 37.037 0.00 0.00 0.00 1.89
3897 6046 7.041372 CCTTTATTTGTCCCACTATCCATAACG 60.041 40.741 0.00 0.00 0.00 3.18
3898 6047 2.902705 TGTCCCACTATCCATAACGC 57.097 50.000 0.00 0.00 0.00 4.84
3899 6048 1.067974 TGTCCCACTATCCATAACGCG 59.932 52.381 3.53 3.53 0.00 6.01
3900 6049 0.032952 TCCCACTATCCATAACGCGC 59.967 55.000 5.73 0.00 0.00 6.86
3901 6050 0.949105 CCCACTATCCATAACGCGCC 60.949 60.000 5.73 0.00 0.00 6.53
3902 6051 1.282248 CCACTATCCATAACGCGCCG 61.282 60.000 5.73 0.00 0.00 6.46
3903 6052 1.663702 ACTATCCATAACGCGCCGC 60.664 57.895 5.73 0.00 0.00 6.53
3904 6053 2.356553 TATCCATAACGCGCCGCC 60.357 61.111 5.73 0.00 0.00 6.13
3905 6054 3.153270 TATCCATAACGCGCCGCCA 62.153 57.895 5.73 0.00 0.00 5.69
3919 6068 3.056328 GCCACCGGCCAAGTCTTC 61.056 66.667 0.00 0.00 44.06 2.87
3920 6069 2.750350 CCACCGGCCAAGTCTTCT 59.250 61.111 0.00 0.00 0.00 2.85
3921 6070 1.376037 CCACCGGCCAAGTCTTCTC 60.376 63.158 0.00 0.00 0.00 2.87
3922 6071 1.674057 CACCGGCCAAGTCTTCTCT 59.326 57.895 0.00 0.00 0.00 3.10
3923 6072 0.671781 CACCGGCCAAGTCTTCTCTG 60.672 60.000 0.00 0.00 0.00 3.35
3924 6073 1.078848 CCGGCCAAGTCTTCTCTGG 60.079 63.158 2.24 0.00 0.00 3.86
3925 6074 1.743252 CGGCCAAGTCTTCTCTGGC 60.743 63.158 2.24 4.88 44.31 4.85
3926 6075 4.310288 GCCAAGTCTTCTCTGGCC 57.690 61.111 0.00 0.00 39.57 5.36
3927 6076 1.743252 GCCAAGTCTTCTCTGGCCG 60.743 63.158 0.00 0.00 39.57 6.13
3928 6077 1.674057 CCAAGTCTTCTCTGGCCGT 59.326 57.895 0.00 0.00 0.00 5.68
3929 6078 0.390472 CCAAGTCTTCTCTGGCCGTC 60.390 60.000 0.00 0.00 0.00 4.79
3930 6079 0.318441 CAAGTCTTCTCTGGCCGTCA 59.682 55.000 0.00 0.00 0.00 4.35
3931 6080 0.318762 AAGTCTTCTCTGGCCGTCAC 59.681 55.000 0.00 0.00 0.00 3.67
3932 6081 1.079750 GTCTTCTCTGGCCGTCACC 60.080 63.158 0.00 0.00 0.00 4.02
3933 6082 1.533033 TCTTCTCTGGCCGTCACCA 60.533 57.895 0.00 0.00 38.29 4.17
3934 6083 0.904865 TCTTCTCTGGCCGTCACCAT 60.905 55.000 0.00 0.00 39.54 3.55
3935 6084 0.460987 CTTCTCTGGCCGTCACCATC 60.461 60.000 0.00 0.00 39.54 3.51
3936 6085 1.191489 TTCTCTGGCCGTCACCATCA 61.191 55.000 0.00 0.00 39.54 3.07
3937 6086 1.153489 CTCTGGCCGTCACCATCAG 60.153 63.158 0.00 0.00 39.54 2.90
3938 6087 1.607801 CTCTGGCCGTCACCATCAGA 61.608 60.000 0.00 0.00 39.54 3.27
3939 6088 1.191489 TCTGGCCGTCACCATCAGAA 61.191 55.000 0.00 0.00 39.54 3.02
3940 6089 0.321564 CTGGCCGTCACCATCAGAAA 60.322 55.000 0.00 0.00 39.54 2.52
3941 6090 0.327924 TGGCCGTCACCATCAGAAAT 59.672 50.000 0.00 0.00 33.75 2.17
3942 6091 1.017387 GGCCGTCACCATCAGAAATC 58.983 55.000 0.00 0.00 0.00 2.17
3943 6092 1.407437 GGCCGTCACCATCAGAAATCT 60.407 52.381 0.00 0.00 0.00 2.40
3944 6093 2.158957 GGCCGTCACCATCAGAAATCTA 60.159 50.000 0.00 0.00 0.00 1.98
3945 6094 3.495100 GGCCGTCACCATCAGAAATCTAT 60.495 47.826 0.00 0.00 0.00 1.98
3946 6095 3.496130 GCCGTCACCATCAGAAATCTATG 59.504 47.826 0.00 0.00 0.00 2.23
3947 6096 4.740634 GCCGTCACCATCAGAAATCTATGA 60.741 45.833 0.00 0.00 0.00 2.15
3948 6097 4.987285 CCGTCACCATCAGAAATCTATGAG 59.013 45.833 0.00 0.00 0.00 2.90
3949 6098 4.987285 CGTCACCATCAGAAATCTATGAGG 59.013 45.833 0.00 0.00 0.00 3.86
3950 6099 5.452496 CGTCACCATCAGAAATCTATGAGGT 60.452 44.000 0.00 0.00 31.40 3.85
3951 6100 5.757320 GTCACCATCAGAAATCTATGAGGTG 59.243 44.000 13.16 13.16 41.29 4.00
3952 6101 5.662657 TCACCATCAGAAATCTATGAGGTGA 59.337 40.000 15.97 15.97 43.51 4.02
3953 6102 5.757320 CACCATCAGAAATCTATGAGGTGAC 59.243 44.000 13.72 0.00 41.82 3.67
3954 6103 4.987285 CCATCAGAAATCTATGAGGTGACG 59.013 45.833 0.00 0.00 0.00 4.35
3955 6104 4.046938 TCAGAAATCTATGAGGTGACGC 57.953 45.455 0.00 0.00 0.00 5.19
3956 6105 3.126831 CAGAAATCTATGAGGTGACGCC 58.873 50.000 0.00 0.00 37.58 5.68
3957 6106 2.128035 GAAATCTATGAGGTGACGCCG 58.872 52.381 0.00 0.00 43.70 6.46
3958 6107 1.112113 AATCTATGAGGTGACGCCGT 58.888 50.000 0.00 0.00 43.70 5.68
3959 6108 0.669077 ATCTATGAGGTGACGCCGTC 59.331 55.000 10.96 10.96 43.70 4.79
3960 6109 1.065928 CTATGAGGTGACGCCGTCC 59.934 63.158 15.60 5.99 43.70 4.79
3961 6110 2.351336 CTATGAGGTGACGCCGTCCC 62.351 65.000 15.60 14.96 43.70 4.46
3974 6123 4.176752 GTCCCGGAGCCCCATGAC 62.177 72.222 0.73 0.00 0.00 3.06
3975 6124 4.414956 TCCCGGAGCCCCATGACT 62.415 66.667 0.73 0.00 0.00 3.41
3976 6125 4.181010 CCCGGAGCCCCATGACTG 62.181 72.222 0.73 0.00 0.00 3.51
3977 6126 3.402681 CCGGAGCCCCATGACTGT 61.403 66.667 0.00 0.00 0.00 3.55
3978 6127 2.187946 CGGAGCCCCATGACTGTC 59.812 66.667 0.00 0.00 0.00 3.51
3979 6128 2.187946 GGAGCCCCATGACTGTCG 59.812 66.667 2.98 0.00 0.00 4.35
3980 6129 2.660064 GGAGCCCCATGACTGTCGT 61.660 63.158 2.98 0.00 0.00 4.34
3981 6130 1.296715 GAGCCCCATGACTGTCGTT 59.703 57.895 0.00 0.00 0.00 3.85
3982 6131 1.003355 AGCCCCATGACTGTCGTTG 60.003 57.895 0.00 1.85 0.00 4.10
3983 6132 2.040544 GCCCCATGACTGTCGTTGG 61.041 63.158 17.92 17.92 0.00 3.77
3984 6133 2.040544 CCCCATGACTGTCGTTGGC 61.041 63.158 18.94 0.00 0.00 4.52
3985 6134 1.003355 CCCATGACTGTCGTTGGCT 60.003 57.895 18.94 0.00 0.00 4.75
3986 6135 1.021390 CCCATGACTGTCGTTGGCTC 61.021 60.000 18.94 0.00 0.00 4.70
3987 6136 1.354337 CCATGACTGTCGTTGGCTCG 61.354 60.000 14.29 0.00 0.00 5.03
3988 6137 0.667487 CATGACTGTCGTTGGCTCGT 60.667 55.000 0.00 0.00 0.00 4.18
3989 6138 0.885879 ATGACTGTCGTTGGCTCGTA 59.114 50.000 2.98 0.00 0.00 3.43
3990 6139 0.885879 TGACTGTCGTTGGCTCGTAT 59.114 50.000 2.98 0.00 0.00 3.06
3991 6140 1.271379 TGACTGTCGTTGGCTCGTATT 59.729 47.619 2.98 0.00 0.00 1.89
3992 6141 2.488937 TGACTGTCGTTGGCTCGTATTA 59.511 45.455 2.98 0.00 0.00 0.98
3993 6142 3.129813 TGACTGTCGTTGGCTCGTATTAT 59.870 43.478 2.98 0.00 0.00 1.28
3994 6143 3.444916 ACTGTCGTTGGCTCGTATTATG 58.555 45.455 3.16 0.00 0.00 1.90
3995 6144 3.119245 ACTGTCGTTGGCTCGTATTATGT 60.119 43.478 3.16 0.00 0.00 2.29
3996 6145 3.852286 TGTCGTTGGCTCGTATTATGTT 58.148 40.909 3.16 0.00 0.00 2.71
3997 6146 3.615056 TGTCGTTGGCTCGTATTATGTTG 59.385 43.478 3.16 0.00 0.00 3.33
3998 6147 3.615496 GTCGTTGGCTCGTATTATGTTGT 59.385 43.478 3.16 0.00 0.00 3.32
3999 6148 3.861113 TCGTTGGCTCGTATTATGTTGTC 59.139 43.478 3.16 0.00 0.00 3.18
4000 6149 3.000925 CGTTGGCTCGTATTATGTTGTCC 59.999 47.826 0.00 0.00 0.00 4.02
4001 6150 3.188159 TGGCTCGTATTATGTTGTCCC 57.812 47.619 0.00 0.00 0.00 4.46
4002 6151 2.502130 TGGCTCGTATTATGTTGTCCCA 59.498 45.455 0.00 0.00 0.00 4.37
4003 6152 3.055021 TGGCTCGTATTATGTTGTCCCAA 60.055 43.478 0.00 0.00 0.00 4.12
4004 6153 3.560068 GGCTCGTATTATGTTGTCCCAAG 59.440 47.826 0.00 0.00 0.00 3.61
4005 6154 3.002348 GCTCGTATTATGTTGTCCCAAGC 59.998 47.826 0.00 0.00 0.00 4.01
4006 6155 3.537580 TCGTATTATGTTGTCCCAAGCC 58.462 45.455 0.00 0.00 0.00 4.35
4007 6156 3.055021 TCGTATTATGTTGTCCCAAGCCA 60.055 43.478 0.00 0.00 0.00 4.75
4008 6157 3.692101 CGTATTATGTTGTCCCAAGCCAA 59.308 43.478 0.00 0.00 0.00 4.52
4009 6158 4.201910 CGTATTATGTTGTCCCAAGCCAAG 60.202 45.833 0.00 0.00 0.00 3.61
4010 6159 2.214376 TATGTTGTCCCAAGCCAAGG 57.786 50.000 0.00 0.00 0.00 3.61
4011 6160 0.188342 ATGTTGTCCCAAGCCAAGGT 59.812 50.000 0.00 0.00 0.00 3.50
4012 6161 0.754957 TGTTGTCCCAAGCCAAGGTG 60.755 55.000 0.00 0.00 0.00 4.00
4013 6162 0.467290 GTTGTCCCAAGCCAAGGTGA 60.467 55.000 0.00 0.00 0.00 4.02
4014 6163 0.178992 TTGTCCCAAGCCAAGGTGAG 60.179 55.000 0.00 0.00 0.00 3.51
4015 6164 1.303643 GTCCCAAGCCAAGGTGAGG 60.304 63.158 0.00 0.00 0.00 3.86
4016 6165 2.036256 CCCAAGCCAAGGTGAGGG 59.964 66.667 0.00 0.00 0.00 4.30
4017 6166 2.845345 CCCAAGCCAAGGTGAGGGT 61.845 63.158 0.00 0.00 38.81 4.34
4018 6167 1.604593 CCAAGCCAAGGTGAGGGTG 60.605 63.158 0.00 0.00 36.88 4.61
4019 6168 1.151450 CAAGCCAAGGTGAGGGTGT 59.849 57.895 0.00 0.00 36.88 4.16
4020 6169 0.890996 CAAGCCAAGGTGAGGGTGTC 60.891 60.000 0.00 0.00 36.88 3.67
4021 6170 2.358737 GCCAAGGTGAGGGTGTCG 60.359 66.667 0.00 0.00 0.00 4.35
4022 6171 2.358737 CCAAGGTGAGGGTGTCGC 60.359 66.667 0.00 0.00 34.63 5.19
4023 6172 2.738521 CAAGGTGAGGGTGTCGCG 60.739 66.667 0.00 0.00 36.43 5.87
4024 6173 4.003788 AAGGTGAGGGTGTCGCGG 62.004 66.667 6.13 0.00 36.43 6.46
4025 6174 4.988716 AGGTGAGGGTGTCGCGGA 62.989 66.667 6.13 0.00 36.43 5.54
4026 6175 4.736896 GGTGAGGGTGTCGCGGAC 62.737 72.222 6.13 3.05 36.43 4.79
4027 6176 3.681835 GTGAGGGTGTCGCGGACT 61.682 66.667 6.13 0.00 33.15 3.85
4028 6177 2.034532 TGAGGGTGTCGCGGACTA 59.965 61.111 6.13 0.00 33.15 2.59
4029 6178 2.044555 TGAGGGTGTCGCGGACTAG 61.045 63.158 6.13 0.00 33.15 2.57
4030 6179 2.754658 AGGGTGTCGCGGACTAGG 60.755 66.667 6.13 0.00 33.15 3.02
4031 6180 3.834799 GGGTGTCGCGGACTAGGG 61.835 72.222 6.13 0.00 33.15 3.53
4032 6181 3.834799 GGTGTCGCGGACTAGGGG 61.835 72.222 6.13 0.00 33.15 4.79
4033 6182 3.834799 GTGTCGCGGACTAGGGGG 61.835 72.222 6.13 0.00 33.15 5.40
4051 6200 1.895798 GGGGTACTAACCTATACGCCC 59.104 57.143 6.29 0.00 44.60 6.13
4052 6201 2.491640 GGGGTACTAACCTATACGCCCT 60.492 54.545 6.29 0.00 44.60 5.19
4053 6202 2.560105 GGGTACTAACCTATACGCCCTG 59.440 54.545 0.00 0.00 45.95 4.45
4054 6203 3.225940 GGTACTAACCTATACGCCCTGT 58.774 50.000 0.00 0.00 43.08 4.00
4055 6204 3.638627 GGTACTAACCTATACGCCCTGTT 59.361 47.826 0.00 0.00 43.08 3.16
4056 6205 3.814005 ACTAACCTATACGCCCTGTTG 57.186 47.619 0.00 0.00 0.00 3.33
4057 6206 3.368248 ACTAACCTATACGCCCTGTTGA 58.632 45.455 0.00 0.00 0.00 3.18
4058 6207 2.685850 AACCTATACGCCCTGTTGAC 57.314 50.000 0.00 0.00 0.00 3.18
4059 6208 1.861982 ACCTATACGCCCTGTTGACT 58.138 50.000 0.00 0.00 0.00 3.41
4060 6209 3.022557 ACCTATACGCCCTGTTGACTA 57.977 47.619 0.00 0.00 0.00 2.59
4061 6210 3.573695 ACCTATACGCCCTGTTGACTAT 58.426 45.455 0.00 0.00 0.00 2.12
4062 6211 3.321111 ACCTATACGCCCTGTTGACTATG 59.679 47.826 0.00 0.00 0.00 2.23
4063 6212 2.910688 ATACGCCCTGTTGACTATGG 57.089 50.000 0.00 0.00 0.00 2.74
4064 6213 0.828022 TACGCCCTGTTGACTATGGG 59.172 55.000 0.00 0.00 42.41 4.00
4066 6215 4.986467 CCCTGTTGACTATGGGCC 57.014 61.111 0.00 0.00 32.49 5.80
4067 6216 1.998530 CCCTGTTGACTATGGGCCA 59.001 57.895 9.61 9.61 32.49 5.36
4068 6217 0.331278 CCCTGTTGACTATGGGCCAA 59.669 55.000 11.89 0.00 32.49 4.52
4069 6218 1.272425 CCCTGTTGACTATGGGCCAAA 60.272 52.381 11.89 0.00 32.49 3.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.997756 GACGGGCCCCCTCTAGGTT 62.998 68.421 18.66 0.00 0.00 3.50
1 2 4.477119 GACGGGCCCCCTCTAGGT 62.477 72.222 18.66 5.97 0.00 3.08
13 14 3.161817 CCGCACTTTTACGACGGG 58.838 61.111 0.00 0.00 40.18 5.28
14 15 0.945265 TTCCCGCACTTTTACGACGG 60.945 55.000 0.00 0.00 43.44 4.79
21 22 3.660501 GGAATCTTTTCCCGCACTTTT 57.339 42.857 0.00 0.00 44.96 2.27
129 137 2.283101 GGATGTGGTTGGCAGGCA 60.283 61.111 0.00 0.00 0.00 4.75
193 203 1.063266 GCAGGATGGTAAAATGGGGGA 60.063 52.381 0.00 0.00 35.86 4.81
199 209 1.689258 GCAGGGGCAGGATGGTAAAAT 60.689 52.381 0.00 0.00 40.72 1.82
200 210 0.324275 GCAGGGGCAGGATGGTAAAA 60.324 55.000 0.00 0.00 40.72 1.52
218 231 0.908198 TTTGCATTTATGGGGGTGGC 59.092 50.000 0.00 0.00 0.00 5.01
225 238 4.382291 CCATGGATGGTTTGCATTTATGG 58.618 43.478 5.56 0.00 43.05 2.74
263 460 8.947115 GGATTTTGTTGAGTACTACTAATGCTT 58.053 33.333 0.00 0.00 0.00 3.91
265 462 8.494016 AGGATTTTGTTGAGTACTACTAATGC 57.506 34.615 0.00 2.21 0.00 3.56
270 467 8.418597 TGAGTAGGATTTTGTTGAGTACTACT 57.581 34.615 0.00 0.00 41.63 2.57
271 468 8.923683 GTTGAGTAGGATTTTGTTGAGTACTAC 58.076 37.037 0.00 0.00 0.00 2.73
272 469 8.644216 TGTTGAGTAGGATTTTGTTGAGTACTA 58.356 33.333 0.00 0.00 0.00 1.82
273 470 7.506114 TGTTGAGTAGGATTTTGTTGAGTACT 58.494 34.615 0.00 0.00 0.00 2.73
274 471 7.724305 TGTTGAGTAGGATTTTGTTGAGTAC 57.276 36.000 0.00 0.00 0.00 2.73
333 535 8.684973 ACGAAGATACTTTCTTATGTACACAC 57.315 34.615 0.00 0.00 44.88 3.82
339 541 9.378551 TGCATTTACGAAGATACTTTCTTATGT 57.621 29.630 0.00 0.00 44.88 2.29
345 547 7.302524 TGGTTTGCATTTACGAAGATACTTTC 58.697 34.615 0.00 0.00 0.00 2.62
347 549 6.811253 TGGTTTGCATTTACGAAGATACTT 57.189 33.333 0.00 0.00 0.00 2.24
348 550 6.038271 GGATGGTTTGCATTTACGAAGATACT 59.962 38.462 0.00 0.00 0.00 2.12
350 552 5.883115 TGGATGGTTTGCATTTACGAAGATA 59.117 36.000 0.00 0.00 0.00 1.98
351 553 4.704540 TGGATGGTTTGCATTTACGAAGAT 59.295 37.500 0.00 0.00 0.00 2.40
352 554 4.075682 TGGATGGTTTGCATTTACGAAGA 58.924 39.130 0.00 0.00 0.00 2.87
353 555 4.433186 TGGATGGTTTGCATTTACGAAG 57.567 40.909 0.00 0.00 0.00 3.79
354 556 4.219507 ACATGGATGGTTTGCATTTACGAA 59.780 37.500 0.00 0.00 33.53 3.85
355 557 3.761218 ACATGGATGGTTTGCATTTACGA 59.239 39.130 0.00 0.00 33.53 3.43
356 558 4.108699 ACATGGATGGTTTGCATTTACG 57.891 40.909 0.00 0.00 33.53 3.18
357 559 7.897575 TTTTACATGGATGGTTTGCATTTAC 57.102 32.000 0.00 0.00 33.53 2.01
456 659 5.864418 TTTGTTGAGTAGGACACACTAGT 57.136 39.130 0.00 0.00 0.00 2.57
457 660 6.706270 ACATTTTGTTGAGTAGGACACACTAG 59.294 38.462 0.00 0.00 0.00 2.57
458 661 6.588204 ACATTTTGTTGAGTAGGACACACTA 58.412 36.000 0.00 0.00 0.00 2.74
459 662 5.437060 ACATTTTGTTGAGTAGGACACACT 58.563 37.500 0.00 0.00 0.00 3.55
460 663 5.751243 ACATTTTGTTGAGTAGGACACAC 57.249 39.130 0.00 0.00 0.00 3.82
461 664 6.119536 AGAACATTTTGTTGAGTAGGACACA 58.880 36.000 0.00 0.00 41.28 3.72
462 665 6.619801 AGAACATTTTGTTGAGTAGGACAC 57.380 37.500 0.00 0.00 41.28 3.67
463 666 7.639113 AAAGAACATTTTGTTGAGTAGGACA 57.361 32.000 0.00 0.00 41.28 4.02
466 669 9.626045 GGAATAAAGAACATTTTGTTGAGTAGG 57.374 33.333 0.00 0.00 41.28 3.18
467 670 9.626045 GGGAATAAAGAACATTTTGTTGAGTAG 57.374 33.333 0.00 0.00 41.28 2.57
469 672 7.145323 CGGGAATAAAGAACATTTTGTTGAGT 58.855 34.615 0.00 0.00 41.28 3.41
470 673 6.089417 GCGGGAATAAAGAACATTTTGTTGAG 59.911 38.462 0.00 0.00 41.28 3.02
471 674 5.923684 GCGGGAATAAAGAACATTTTGTTGA 59.076 36.000 0.00 0.00 41.28 3.18
472 675 5.694006 TGCGGGAATAAAGAACATTTTGTTG 59.306 36.000 0.00 0.00 41.28 3.33
473 676 5.848406 TGCGGGAATAAAGAACATTTTGTT 58.152 33.333 0.00 0.00 44.37 2.83
474 677 5.461032 TGCGGGAATAAAGAACATTTTGT 57.539 34.783 0.00 0.00 0.00 2.83
475 678 6.777526 TTTGCGGGAATAAAGAACATTTTG 57.222 33.333 0.00 0.00 0.00 2.44
476 679 7.793927 TTTTTGCGGGAATAAAGAACATTTT 57.206 28.000 0.00 0.00 0.00 1.82
557 760 3.749088 TGGGAATTGTAGCAACACTTACG 59.251 43.478 0.00 0.00 31.43 3.18
558 761 5.699097 TTGGGAATTGTAGCAACACTTAC 57.301 39.130 0.00 0.00 34.61 2.34
611 814 0.967380 ATTACCAAGCTGCCCAGTGC 60.967 55.000 0.00 0.00 41.77 4.40
623 826 7.685641 GAAACAATTCACAGGGTTGATTACCAA 60.686 37.037 0.00 0.00 40.91 3.67
624 827 6.239176 GAAACAATTCACAGGGTTGATTACCA 60.239 38.462 0.00 0.00 40.91 3.25
625 828 5.722021 AACAATTCACAGGGTTGATTACC 57.278 39.130 0.00 0.00 46.99 2.85
626 829 6.156519 GGAAACAATTCACAGGGTTGATTAC 58.843 40.000 0.00 0.00 37.29 1.89
627 830 5.245075 GGGAAACAATTCACAGGGTTGATTA 59.755 40.000 0.00 0.00 38.90 1.75
628 831 4.040339 GGGAAACAATTCACAGGGTTGATT 59.960 41.667 0.00 0.00 38.90 2.57
629 832 3.578282 GGGAAACAATTCACAGGGTTGAT 59.422 43.478 0.00 0.00 38.90 2.57
630 833 2.962421 GGGAAACAATTCACAGGGTTGA 59.038 45.455 0.00 0.00 38.90 3.18
631 834 2.288152 CGGGAAACAATTCACAGGGTTG 60.288 50.000 0.00 0.00 39.01 3.77
632 835 1.960689 CGGGAAACAATTCACAGGGTT 59.039 47.619 0.00 0.00 39.01 4.11
633 836 1.133606 ACGGGAAACAATTCACAGGGT 60.134 47.619 0.00 0.00 39.01 4.34
634 837 1.269448 CACGGGAAACAATTCACAGGG 59.731 52.381 0.00 0.00 39.01 4.45
635 838 2.031157 GTCACGGGAAACAATTCACAGG 60.031 50.000 0.00 0.00 39.01 4.00
636 839 2.616376 TGTCACGGGAAACAATTCACAG 59.384 45.455 0.00 0.00 39.01 3.66
637 840 2.644676 TGTCACGGGAAACAATTCACA 58.355 42.857 0.00 0.00 39.01 3.58
638 841 3.701532 TTGTCACGGGAAACAATTCAC 57.298 42.857 0.00 0.00 37.29 3.18
639 842 4.720649 TTTTGTCACGGGAAACAATTCA 57.279 36.364 0.00 0.00 37.29 2.57
640 843 4.269123 GGTTTTTGTCACGGGAAACAATTC 59.731 41.667 0.00 0.00 35.46 2.17
641 844 4.185394 GGTTTTTGTCACGGGAAACAATT 58.815 39.130 0.00 0.00 35.46 2.32
642 845 3.195825 TGGTTTTTGTCACGGGAAACAAT 59.804 39.130 0.00 0.00 35.46 2.71
643 846 2.561419 TGGTTTTTGTCACGGGAAACAA 59.439 40.909 0.00 0.00 34.54 2.83
644 847 2.164624 CTGGTTTTTGTCACGGGAAACA 59.835 45.455 0.00 0.00 34.54 2.83
645 848 2.164827 ACTGGTTTTTGTCACGGGAAAC 59.835 45.455 0.00 0.00 0.00 2.78
646 849 2.164624 CACTGGTTTTTGTCACGGGAAA 59.835 45.455 0.00 0.00 0.00 3.13
647 850 1.746220 CACTGGTTTTTGTCACGGGAA 59.254 47.619 0.00 0.00 0.00 3.97
648 851 1.065345 TCACTGGTTTTTGTCACGGGA 60.065 47.619 0.00 0.00 0.00 5.14
649 852 1.384525 TCACTGGTTTTTGTCACGGG 58.615 50.000 0.00 0.00 0.00 5.28
650 853 3.708563 ATTCACTGGTTTTTGTCACGG 57.291 42.857 0.00 0.00 0.00 4.94
651 854 4.420168 ACAATTCACTGGTTTTTGTCACG 58.580 39.130 0.00 0.00 0.00 4.35
652 855 5.406649 TGACAATTCACTGGTTTTTGTCAC 58.593 37.500 11.52 0.00 46.59 3.67
654 857 5.866633 TGTTGACAATTCACTGGTTTTTGTC 59.133 36.000 7.05 7.05 43.96 3.18
655 858 5.788450 TGTTGACAATTCACTGGTTTTTGT 58.212 33.333 0.00 0.00 33.47 2.83
656 859 6.718454 TTGTTGACAATTCACTGGTTTTTG 57.282 33.333 0.00 0.00 0.00 2.44
657 860 7.158021 TCTTTGTTGACAATTCACTGGTTTTT 58.842 30.769 0.00 0.00 35.55 1.94
658 861 6.696411 TCTTTGTTGACAATTCACTGGTTTT 58.304 32.000 0.00 0.00 35.55 2.43
659 862 6.279513 TCTTTGTTGACAATTCACTGGTTT 57.720 33.333 0.00 0.00 35.55 3.27
660 863 5.913137 TCTTTGTTGACAATTCACTGGTT 57.087 34.783 0.00 0.00 35.55 3.67
661 864 6.469782 AATCTTTGTTGACAATTCACTGGT 57.530 33.333 0.00 0.00 35.55 4.00
662 865 9.480053 AATAAATCTTTGTTGACAATTCACTGG 57.520 29.630 0.00 0.00 35.55 4.00
706 909 8.777578 TGCTCTCCTACTTATCCTTGTAATAA 57.222 34.615 0.00 0.00 0.00 1.40
707 910 8.005388 ACTGCTCTCCTACTTATCCTTGTAATA 58.995 37.037 0.00 0.00 0.00 0.98
708 911 6.841755 ACTGCTCTCCTACTTATCCTTGTAAT 59.158 38.462 0.00 0.00 0.00 1.89
711 914 4.615513 ACTGCTCTCCTACTTATCCTTGT 58.384 43.478 0.00 0.00 0.00 3.16
729 932 2.770164 TCTTTCTTGCTCCCTACTGC 57.230 50.000 0.00 0.00 0.00 4.40
730 933 4.249661 GTCTTCTTTCTTGCTCCCTACTG 58.750 47.826 0.00 0.00 0.00 2.74
751 957 1.204941 GTCCACGGAAGATACTGCTGT 59.795 52.381 0.66 0.66 0.00 4.40
792 1089 2.807108 GCGGAGGGTAGAATGGTCATTC 60.807 54.545 14.01 14.01 45.66 2.67
897 1196 0.964358 AACGACGGAGAGGTGGTAGG 60.964 60.000 0.00 0.00 0.00 3.18
899 1198 0.538057 ACAACGACGGAGAGGTGGTA 60.538 55.000 0.00 0.00 31.80 3.25
903 1205 0.898789 ATCCACAACGACGGAGAGGT 60.899 55.000 0.00 0.00 33.97 3.85
966 1268 4.722535 AAGCTCCCTCTCCCCGCA 62.723 66.667 0.00 0.00 0.00 5.69
1092 1401 2.567049 GAGTCCGTCACCGTCCTG 59.433 66.667 0.00 0.00 0.00 3.86
1529 1852 3.362797 CTGGTGCTGCTGTGGCTG 61.363 66.667 0.00 0.00 39.59 4.85
1566 1889 2.634453 CCTTTTGGGCCTGTTTCTTGAT 59.366 45.455 4.53 0.00 35.46 2.57
1577 1900 0.033109 ATGCCTCTACCTTTTGGGCC 60.033 55.000 0.00 0.00 46.08 5.80
1593 1916 6.749118 GTGTTCCAATAGTTCTCATTTCATGC 59.251 38.462 0.00 0.00 0.00 4.06
1801 2140 2.632377 TCGCCCTCATTCTTGAACATC 58.368 47.619 0.00 0.00 0.00 3.06
1816 2155 3.619929 ACACATAGTTTAACGATTCGCCC 59.380 43.478 5.86 0.00 0.00 6.13
1952 2292 6.038050 GTGGTGCAAAAATCTCCAAAATGAAA 59.962 34.615 0.00 0.00 0.00 2.69
2028 2376 1.243902 TTGACATCTGAAAACCCGCC 58.756 50.000 0.00 0.00 0.00 6.13
2030 2378 4.503741 AACATTGACATCTGAAAACCCG 57.496 40.909 0.00 0.00 0.00 5.28
2031 2379 6.515832 AGAAAACATTGACATCTGAAAACCC 58.484 36.000 0.00 0.00 0.00 4.11
2038 2386 9.304731 TCTTTTTGAAGAAAACATTGACATCTG 57.695 29.630 0.00 0.00 30.56 2.90
2041 2389 9.603921 ACATCTTTTTGAAGAAAACATTGACAT 57.396 25.926 0.00 0.00 30.56 3.06
2137 2491 9.334947 ACAGATATGGTATCTGAAATTGACTTG 57.665 33.333 25.64 4.28 46.25 3.16
2160 2514 7.711339 AGTTAGAAACAAGAAACAGGTAGACAG 59.289 37.037 0.00 0.00 0.00 3.51
2166 2520 6.884836 ACTGAAGTTAGAAACAAGAAACAGGT 59.115 34.615 0.00 0.00 0.00 4.00
2188 2542 5.347635 CCTGATGCAATTGAATTGACAACTG 59.652 40.000 21.14 17.23 42.83 3.16
2189 2543 5.011329 ACCTGATGCAATTGAATTGACAACT 59.989 36.000 21.14 5.38 42.83 3.16
2199 2553 2.583024 TGGACACCTGATGCAATTGA 57.417 45.000 10.34 0.00 0.00 2.57
2200 2554 3.517602 CATTGGACACCTGATGCAATTG 58.482 45.455 0.00 0.00 0.00 2.32
2292 2647 4.316823 AGGGACAGCTCCGGGACA 62.317 66.667 0.00 0.00 37.46 4.02
2503 2858 5.518487 CCAACAAACAATGTGGTCTACAAAC 59.482 40.000 0.00 0.00 42.99 2.93
2510 2865 3.494251 GCATTCCAACAAACAATGTGGTC 59.506 43.478 0.00 0.00 42.99 4.02
2512 2867 3.731089 AGCATTCCAACAAACAATGTGG 58.269 40.909 0.00 0.00 42.99 4.17
2537 2892 5.181245 CCACGAGGAACATGTCTTAATTGTT 59.819 40.000 0.00 0.00 36.89 2.83
2577 2932 2.058798 CTGCATCAACAGCAAAGCAAG 58.941 47.619 0.00 0.00 42.17 4.01
2707 3062 8.515414 GGAAACATGGATAATTGTAGATTAGCC 58.485 37.037 0.00 6.20 39.70 3.93
2708 3063 9.066892 TGGAAACATGGATAATTGTAGATTAGC 57.933 33.333 0.00 0.00 33.40 3.09
2738 3101 6.828273 TCTGGTAAATGTTCCAATGTAGATGG 59.172 38.462 0.00 0.00 39.41 3.51
3003 5112 3.378602 TAGCTCGCCGACTTGCCA 61.379 61.111 0.00 0.00 0.00 4.92
3123 5232 2.368875 CCTGAACCCTCAGTAGTGTGTT 59.631 50.000 0.00 0.58 46.71 3.32
3133 5242 0.620556 GCCTCAATCCTGAACCCTCA 59.379 55.000 0.00 0.00 0.00 3.86
3214 5330 2.672961 TAACTCTCGGCACATTCCAG 57.327 50.000 0.00 0.00 0.00 3.86
3320 5438 3.930229 CGACAGATCGTCACCCAATTTTA 59.070 43.478 14.90 0.00 45.70 1.52
3366 5484 0.540923 ATTGGCAGTGAGCTCTCCTC 59.459 55.000 16.19 5.86 44.79 3.71
3550 5669 4.079958 GCTTGAGGTAATCCCCCTTTCTAA 60.080 45.833 0.00 0.00 30.60 2.10
3566 5685 2.054232 AATGATGCAGAGGCTTGAGG 57.946 50.000 0.00 0.00 41.91 3.86
3626 5775 5.532779 GCCAAGAGAAATCAAATAGTAGGGG 59.467 44.000 0.00 0.00 0.00 4.79
3637 5786 3.282021 GCCTACATGCCAAGAGAAATCA 58.718 45.455 0.00 0.00 0.00 2.57
3649 5798 1.242076 GATGTGGATGGCCTACATGC 58.758 55.000 16.43 3.60 46.95 4.06
3650 5799 2.501261 CTGATGTGGATGGCCTACATG 58.499 52.381 16.43 0.00 40.72 3.21
3651 5800 1.202855 GCTGATGTGGATGGCCTACAT 60.203 52.381 3.32 9.67 44.18 2.29
3652 5801 0.181114 GCTGATGTGGATGGCCTACA 59.819 55.000 3.32 4.67 34.31 2.74
3653 5802 0.882042 CGCTGATGTGGATGGCCTAC 60.882 60.000 3.32 0.00 34.31 3.18
3654 5803 1.048160 TCGCTGATGTGGATGGCCTA 61.048 55.000 3.32 0.00 34.31 3.93
3655 5804 1.703014 ATCGCTGATGTGGATGGCCT 61.703 55.000 3.32 0.00 34.31 5.19
3656 5805 1.228063 ATCGCTGATGTGGATGGCC 60.228 57.895 0.00 0.00 0.00 5.36
3657 5806 0.533531 TGATCGCTGATGTGGATGGC 60.534 55.000 0.00 0.00 0.00 4.40
3703 5852 3.788227 ATAGAACTGTTGAGGTGGCAA 57.212 42.857 0.00 0.00 0.00 4.52
3735 5884 6.827586 AAGTAGGCGGTTCATTATTTGAAA 57.172 33.333 0.00 0.00 45.71 2.69
3763 5912 1.381165 GCAAACAGTGTGACGGGGTT 61.381 55.000 0.00 0.00 0.00 4.11
3774 5923 1.531602 GGAAGGGGCAGCAAACAGT 60.532 57.895 0.00 0.00 0.00 3.55
3783 5932 0.324275 GGCAATAAGTGGAAGGGGCA 60.324 55.000 0.00 0.00 0.00 5.36
3797 5946 3.914426 ACCGTCTAATGAAGAGGCAAT 57.086 42.857 0.00 0.00 38.53 3.56
3798 5947 3.596214 GAACCGTCTAATGAAGAGGCAA 58.404 45.455 0.00 0.00 38.53 4.52
3799 5948 2.093658 GGAACCGTCTAATGAAGAGGCA 60.094 50.000 0.00 0.00 38.53 4.75
3800 5949 2.168728 AGGAACCGTCTAATGAAGAGGC 59.831 50.000 0.00 0.00 38.53 4.70
3801 5950 4.434520 GAAGGAACCGTCTAATGAAGAGG 58.565 47.826 0.00 0.00 39.38 3.69
3802 5951 4.081642 TGGAAGGAACCGTCTAATGAAGAG 60.082 45.833 6.72 0.00 33.88 2.85
3803 5952 3.835978 TGGAAGGAACCGTCTAATGAAGA 59.164 43.478 6.72 0.00 0.00 2.87
3804 5953 4.202245 TGGAAGGAACCGTCTAATGAAG 57.798 45.455 6.72 0.00 0.00 3.02
3805 5954 4.766375 GATGGAAGGAACCGTCTAATGAA 58.234 43.478 6.72 0.00 41.30 2.57
3806 5955 4.402056 GATGGAAGGAACCGTCTAATGA 57.598 45.455 6.72 0.00 41.30 2.57
3812 5961 0.178301 GGGAGATGGAAGGAACCGTC 59.822 60.000 0.00 0.00 43.88 4.79
3813 5962 0.252742 AGGGAGATGGAAGGAACCGT 60.253 55.000 0.00 0.00 0.00 4.83
3814 5963 0.466124 GAGGGAGATGGAAGGAACCG 59.534 60.000 0.00 0.00 0.00 4.44
3815 5964 0.840617 GGAGGGAGATGGAAGGAACC 59.159 60.000 0.00 0.00 0.00 3.62
3816 5965 1.210722 GTGGAGGGAGATGGAAGGAAC 59.789 57.143 0.00 0.00 0.00 3.62
3817 5966 1.584724 GTGGAGGGAGATGGAAGGAA 58.415 55.000 0.00 0.00 0.00 3.36
3818 5967 0.326618 GGTGGAGGGAGATGGAAGGA 60.327 60.000 0.00 0.00 0.00 3.36
3819 5968 0.621571 TGGTGGAGGGAGATGGAAGG 60.622 60.000 0.00 0.00 0.00 3.46
3820 5969 1.289160 TTGGTGGAGGGAGATGGAAG 58.711 55.000 0.00 0.00 0.00 3.46
3821 5970 1.985622 ATTGGTGGAGGGAGATGGAA 58.014 50.000 0.00 0.00 0.00 3.53
3822 5971 2.887454 TATTGGTGGAGGGAGATGGA 57.113 50.000 0.00 0.00 0.00 3.41
3823 5972 3.951563 TTTATTGGTGGAGGGAGATGG 57.048 47.619 0.00 0.00 0.00 3.51
3824 5973 5.312079 GAGATTTATTGGTGGAGGGAGATG 58.688 45.833 0.00 0.00 0.00 2.90
3825 5974 4.352298 GGAGATTTATTGGTGGAGGGAGAT 59.648 45.833 0.00 0.00 0.00 2.75
3826 5975 3.716872 GGAGATTTATTGGTGGAGGGAGA 59.283 47.826 0.00 0.00 0.00 3.71
3827 5976 3.459598 TGGAGATTTATTGGTGGAGGGAG 59.540 47.826 0.00 0.00 0.00 4.30
3828 5977 3.469859 TGGAGATTTATTGGTGGAGGGA 58.530 45.455 0.00 0.00 0.00 4.20
3829 5978 3.951563 TGGAGATTTATTGGTGGAGGG 57.048 47.619 0.00 0.00 0.00 4.30
3830 5979 4.599041 TGTTGGAGATTTATTGGTGGAGG 58.401 43.478 0.00 0.00 0.00 4.30
3831 5980 6.153340 ACAATGTTGGAGATTTATTGGTGGAG 59.847 38.462 0.00 0.00 34.07 3.86
3832 5981 6.015918 ACAATGTTGGAGATTTATTGGTGGA 58.984 36.000 0.00 0.00 34.07 4.02
3833 5982 6.153340 AGACAATGTTGGAGATTTATTGGTGG 59.847 38.462 0.00 0.00 34.07 4.61
3834 5983 7.161773 AGACAATGTTGGAGATTTATTGGTG 57.838 36.000 0.00 0.00 34.07 4.17
3835 5984 7.781324 AAGACAATGTTGGAGATTTATTGGT 57.219 32.000 0.00 0.00 34.07 3.67
3836 5985 8.928733 CAAAAGACAATGTTGGAGATTTATTGG 58.071 33.333 0.00 0.00 34.07 3.16
3837 5986 9.695526 TCAAAAGACAATGTTGGAGATTTATTG 57.304 29.630 0.00 0.00 35.47 1.90
3840 5989 9.912634 GAATCAAAAGACAATGTTGGAGATTTA 57.087 29.630 0.00 0.00 0.00 1.40
3841 5990 8.645110 AGAATCAAAAGACAATGTTGGAGATTT 58.355 29.630 0.00 0.00 0.00 2.17
3842 5991 8.186709 AGAATCAAAAGACAATGTTGGAGATT 57.813 30.769 0.00 0.00 0.00 2.40
3843 5992 7.771927 AGAATCAAAAGACAATGTTGGAGAT 57.228 32.000 0.00 0.00 0.00 2.75
3844 5993 7.503566 AGAAGAATCAAAAGACAATGTTGGAGA 59.496 33.333 0.00 0.00 0.00 3.71
3845 5994 7.655490 AGAAGAATCAAAAGACAATGTTGGAG 58.345 34.615 0.00 0.00 0.00 3.86
3846 5995 7.255590 GGAGAAGAATCAAAAGACAATGTTGGA 60.256 37.037 0.00 0.00 0.00 3.53
3847 5996 6.865205 GGAGAAGAATCAAAAGACAATGTTGG 59.135 38.462 0.00 0.00 0.00 3.77
3848 5997 7.655490 AGGAGAAGAATCAAAAGACAATGTTG 58.345 34.615 0.00 0.00 0.00 3.33
3849 5998 7.830099 AGGAGAAGAATCAAAAGACAATGTT 57.170 32.000 0.00 0.00 0.00 2.71
3850 5999 7.830099 AAGGAGAAGAATCAAAAGACAATGT 57.170 32.000 0.00 0.00 0.00 2.71
3857 6006 9.631452 GGACAAATAAAGGAGAAGAATCAAAAG 57.369 33.333 0.00 0.00 0.00 2.27
3858 6007 8.585018 GGGACAAATAAAGGAGAAGAATCAAAA 58.415 33.333 0.00 0.00 0.00 2.44
3859 6008 7.728083 TGGGACAAATAAAGGAGAAGAATCAAA 59.272 33.333 0.00 0.00 31.92 2.69
3860 6009 7.176690 GTGGGACAAATAAAGGAGAAGAATCAA 59.823 37.037 0.00 0.00 44.16 2.57
3861 6010 6.659242 GTGGGACAAATAAAGGAGAAGAATCA 59.341 38.462 0.00 0.00 44.16 2.57
3862 6011 6.887002 AGTGGGACAAATAAAGGAGAAGAATC 59.113 38.462 0.00 0.00 44.16 2.52
3863 6012 6.794534 AGTGGGACAAATAAAGGAGAAGAAT 58.205 36.000 0.00 0.00 44.16 2.40
3864 6013 6.200878 AGTGGGACAAATAAAGGAGAAGAA 57.799 37.500 0.00 0.00 44.16 2.52
3865 6014 5.843019 AGTGGGACAAATAAAGGAGAAGA 57.157 39.130 0.00 0.00 44.16 2.87
3866 6015 6.768381 GGATAGTGGGACAAATAAAGGAGAAG 59.232 42.308 0.00 0.00 44.16 2.85
3867 6016 6.216662 TGGATAGTGGGACAAATAAAGGAGAA 59.783 38.462 0.00 0.00 44.16 2.87
3868 6017 5.729229 TGGATAGTGGGACAAATAAAGGAGA 59.271 40.000 0.00 0.00 44.16 3.71
3869 6018 6.001449 TGGATAGTGGGACAAATAAAGGAG 57.999 41.667 0.00 0.00 44.16 3.69
3870 6019 6.590656 ATGGATAGTGGGACAAATAAAGGA 57.409 37.500 0.00 0.00 44.16 3.36
3871 6020 7.041372 CGTTATGGATAGTGGGACAAATAAAGG 60.041 40.741 0.00 0.00 44.16 3.11
3872 6021 7.519970 GCGTTATGGATAGTGGGACAAATAAAG 60.520 40.741 0.00 0.00 44.16 1.85
3873 6022 6.261381 GCGTTATGGATAGTGGGACAAATAAA 59.739 38.462 0.00 0.00 44.16 1.40
3874 6023 5.761234 GCGTTATGGATAGTGGGACAAATAA 59.239 40.000 0.00 0.00 44.16 1.40
3875 6024 5.302360 GCGTTATGGATAGTGGGACAAATA 58.698 41.667 0.00 0.00 44.16 1.40
3876 6025 4.134563 GCGTTATGGATAGTGGGACAAAT 58.865 43.478 0.00 0.00 44.16 2.32
3877 6026 3.537580 GCGTTATGGATAGTGGGACAAA 58.462 45.455 0.00 0.00 44.16 2.83
3878 6027 2.482316 CGCGTTATGGATAGTGGGACAA 60.482 50.000 0.00 0.00 44.16 3.18
3879 6028 1.067974 CGCGTTATGGATAGTGGGACA 59.932 52.381 0.00 0.00 0.00 4.02
3880 6029 1.779569 CGCGTTATGGATAGTGGGAC 58.220 55.000 0.00 0.00 0.00 4.46
3881 6030 0.032952 GCGCGTTATGGATAGTGGGA 59.967 55.000 8.43 0.00 0.00 4.37
3882 6031 0.949105 GGCGCGTTATGGATAGTGGG 60.949 60.000 8.43 0.00 0.00 4.61
3883 6032 1.282248 CGGCGCGTTATGGATAGTGG 61.282 60.000 8.43 0.00 0.00 4.00
3884 6033 1.886861 GCGGCGCGTTATGGATAGTG 61.887 60.000 19.09 0.00 0.00 2.74
3885 6034 1.663702 GCGGCGCGTTATGGATAGT 60.664 57.895 19.09 0.00 0.00 2.12
3886 6035 2.380410 GGCGGCGCGTTATGGATAG 61.380 63.158 26.95 0.00 0.00 2.08
3887 6036 2.356553 GGCGGCGCGTTATGGATA 60.357 61.111 26.95 0.00 0.00 2.59
3888 6037 4.539083 TGGCGGCGCGTTATGGAT 62.539 61.111 26.95 0.00 0.00 3.41
3903 6052 1.376037 GAGAAGACTTGGCCGGTGG 60.376 63.158 1.90 0.00 0.00 4.61
3904 6053 0.671781 CAGAGAAGACTTGGCCGGTG 60.672 60.000 1.90 0.00 0.00 4.94
3905 6054 1.674057 CAGAGAAGACTTGGCCGGT 59.326 57.895 1.90 0.00 0.00 5.28
3906 6055 1.078848 CCAGAGAAGACTTGGCCGG 60.079 63.158 0.00 0.00 0.00 6.13
3907 6056 1.743252 GCCAGAGAAGACTTGGCCG 60.743 63.158 4.75 0.00 39.57 6.13
3908 6057 4.310288 GCCAGAGAAGACTTGGCC 57.690 61.111 4.75 0.00 39.57 5.36
3909 6058 1.743252 CGGCCAGAGAAGACTTGGC 60.743 63.158 2.24 7.28 44.31 4.52
3910 6059 0.390472 GACGGCCAGAGAAGACTTGG 60.390 60.000 2.24 0.00 0.00 3.61
3911 6060 0.318441 TGACGGCCAGAGAAGACTTG 59.682 55.000 2.24 0.00 0.00 3.16
3912 6061 0.318762 GTGACGGCCAGAGAAGACTT 59.681 55.000 2.24 0.00 0.00 3.01
3913 6062 1.536943 GGTGACGGCCAGAGAAGACT 61.537 60.000 2.24 0.00 0.00 3.24
3914 6063 1.079750 GGTGACGGCCAGAGAAGAC 60.080 63.158 2.24 0.00 0.00 3.01
3915 6064 0.904865 ATGGTGACGGCCAGAGAAGA 60.905 55.000 2.24 0.00 42.47 2.87
3916 6065 0.460987 GATGGTGACGGCCAGAGAAG 60.461 60.000 2.24 0.00 42.47 2.85
3917 6066 1.191489 TGATGGTGACGGCCAGAGAA 61.191 55.000 2.24 0.00 42.47 2.87
3918 6067 1.607801 CTGATGGTGACGGCCAGAGA 61.608 60.000 2.24 0.00 42.47 3.10
3919 6068 1.153489 CTGATGGTGACGGCCAGAG 60.153 63.158 2.24 0.00 42.47 3.35
3920 6069 1.191489 TTCTGATGGTGACGGCCAGA 61.191 55.000 2.24 0.00 42.47 3.86
3921 6070 0.321564 TTTCTGATGGTGACGGCCAG 60.322 55.000 2.24 0.00 42.47 4.85
3922 6071 0.327924 ATTTCTGATGGTGACGGCCA 59.672 50.000 2.24 0.00 43.48 5.36
3923 6072 1.017387 GATTTCTGATGGTGACGGCC 58.983 55.000 0.00 0.00 0.00 6.13
3924 6073 2.029838 AGATTTCTGATGGTGACGGC 57.970 50.000 0.00 0.00 0.00 5.68
3925 6074 4.948847 TCATAGATTTCTGATGGTGACGG 58.051 43.478 0.00 0.00 0.00 4.79
3926 6075 4.987285 CCTCATAGATTTCTGATGGTGACG 59.013 45.833 0.00 0.00 0.00 4.35
3927 6076 5.757320 CACCTCATAGATTTCTGATGGTGAC 59.243 44.000 13.59 0.00 39.92 3.67
3928 6077 5.662657 TCACCTCATAGATTTCTGATGGTGA 59.337 40.000 15.74 15.74 41.73 4.02
3929 6078 5.757320 GTCACCTCATAGATTTCTGATGGTG 59.243 44.000 0.00 0.00 39.46 4.17
3930 6079 5.452496 CGTCACCTCATAGATTTCTGATGGT 60.452 44.000 0.00 0.00 0.00 3.55
3931 6080 4.987285 CGTCACCTCATAGATTTCTGATGG 59.013 45.833 0.00 0.00 0.00 3.51
3932 6081 4.447054 GCGTCACCTCATAGATTTCTGATG 59.553 45.833 0.00 0.00 0.00 3.07
3933 6082 4.502259 GGCGTCACCTCATAGATTTCTGAT 60.502 45.833 0.00 0.00 34.51 2.90
3934 6083 3.181475 GGCGTCACCTCATAGATTTCTGA 60.181 47.826 0.00 0.00 34.51 3.27
3935 6084 3.126831 GGCGTCACCTCATAGATTTCTG 58.873 50.000 0.00 0.00 34.51 3.02
3936 6085 2.223829 CGGCGTCACCTCATAGATTTCT 60.224 50.000 0.00 0.00 35.61 2.52
3937 6086 2.128035 CGGCGTCACCTCATAGATTTC 58.872 52.381 0.00 0.00 35.61 2.17
3938 6087 1.480954 ACGGCGTCACCTCATAGATTT 59.519 47.619 6.77 0.00 35.61 2.17
3939 6088 1.067212 GACGGCGTCACCTCATAGATT 59.933 52.381 33.07 0.00 35.61 2.40
3940 6089 0.669077 GACGGCGTCACCTCATAGAT 59.331 55.000 33.07 0.00 35.61 1.98
3941 6090 1.381928 GGACGGCGTCACCTCATAGA 61.382 60.000 37.13 0.00 33.68 1.98
3942 6091 1.065928 GGACGGCGTCACCTCATAG 59.934 63.158 37.13 0.00 33.68 2.23
3943 6092 2.420568 GGGACGGCGTCACCTCATA 61.421 63.158 37.13 0.00 33.68 2.15
3944 6093 3.771160 GGGACGGCGTCACCTCAT 61.771 66.667 37.13 1.55 33.68 2.90
3957 6106 4.176752 GTCATGGGGCTCCGGGAC 62.177 72.222 10.37 10.37 35.24 4.46
3958 6107 4.414956 AGTCATGGGGCTCCGGGA 62.415 66.667 0.00 0.00 35.24 5.14
3959 6108 4.181010 CAGTCATGGGGCTCCGGG 62.181 72.222 0.00 0.00 35.24 5.73
3960 6109 3.391665 GACAGTCATGGGGCTCCGG 62.392 68.421 0.00 0.00 35.24 5.14
3961 6110 2.187946 GACAGTCATGGGGCTCCG 59.812 66.667 0.00 0.00 35.24 4.63
3962 6111 2.185310 AACGACAGTCATGGGGCTCC 62.185 60.000 0.00 0.00 0.00 4.70
3963 6112 1.021390 CAACGACAGTCATGGGGCTC 61.021 60.000 0.41 0.00 0.00 4.70
3964 6113 1.003355 CAACGACAGTCATGGGGCT 60.003 57.895 0.41 0.00 0.00 5.19
3965 6114 2.040544 CCAACGACAGTCATGGGGC 61.041 63.158 12.72 0.00 0.00 5.80
3966 6115 2.040544 GCCAACGACAGTCATGGGG 61.041 63.158 19.32 8.34 33.45 4.96
3967 6116 1.003355 AGCCAACGACAGTCATGGG 60.003 57.895 19.32 5.18 33.45 4.00
3968 6117 1.354337 CGAGCCAACGACAGTCATGG 61.354 60.000 15.29 15.29 36.00 3.66
3969 6118 0.667487 ACGAGCCAACGACAGTCATG 60.667 55.000 0.41 0.00 37.03 3.07
3970 6119 0.885879 TACGAGCCAACGACAGTCAT 59.114 50.000 0.41 0.00 37.03 3.06
3971 6120 0.885879 ATACGAGCCAACGACAGTCA 59.114 50.000 0.41 0.00 37.03 3.41
3972 6121 1.992170 AATACGAGCCAACGACAGTC 58.008 50.000 0.00 0.00 37.03 3.51
3973 6122 3.119245 ACATAATACGAGCCAACGACAGT 60.119 43.478 0.00 0.00 37.03 3.55
3974 6123 3.444916 ACATAATACGAGCCAACGACAG 58.555 45.455 0.00 0.00 37.03 3.51
3975 6124 3.513680 ACATAATACGAGCCAACGACA 57.486 42.857 0.00 0.00 37.03 4.35
3976 6125 3.615496 ACAACATAATACGAGCCAACGAC 59.385 43.478 0.00 0.00 37.03 4.34
3977 6126 3.852286 ACAACATAATACGAGCCAACGA 58.148 40.909 0.00 0.00 37.03 3.85
3978 6127 3.000925 GGACAACATAATACGAGCCAACG 59.999 47.826 0.00 0.00 39.31 4.10
3979 6128 3.311596 GGGACAACATAATACGAGCCAAC 59.688 47.826 0.00 0.00 0.00 3.77
3980 6129 3.055021 TGGGACAACATAATACGAGCCAA 60.055 43.478 0.00 0.00 31.92 4.52
3981 6130 2.502130 TGGGACAACATAATACGAGCCA 59.498 45.455 0.00 0.00 31.92 4.75
3982 6131 3.188159 TGGGACAACATAATACGAGCC 57.812 47.619 0.00 0.00 31.92 4.70
3996 6145 1.455849 CTCACCTTGGCTTGGGACA 59.544 57.895 1.86 0.00 0.00 4.02
3997 6146 1.303643 CCTCACCTTGGCTTGGGAC 60.304 63.158 1.86 0.00 0.00 4.46
3998 6147 2.538141 CCCTCACCTTGGCTTGGGA 61.538 63.158 5.81 0.00 36.90 4.37
3999 6148 2.036256 CCCTCACCTTGGCTTGGG 59.964 66.667 1.86 0.00 0.00 4.12
4000 6149 1.604593 CACCCTCACCTTGGCTTGG 60.605 63.158 0.00 0.00 0.00 3.61
4001 6150 0.890996 GACACCCTCACCTTGGCTTG 60.891 60.000 0.00 0.00 0.00 4.01
4002 6151 1.456287 GACACCCTCACCTTGGCTT 59.544 57.895 0.00 0.00 0.00 4.35
4003 6152 2.883828 CGACACCCTCACCTTGGCT 61.884 63.158 0.00 0.00 0.00 4.75
4004 6153 2.358737 CGACACCCTCACCTTGGC 60.359 66.667 0.00 0.00 0.00 4.52
4005 6154 2.358737 GCGACACCCTCACCTTGG 60.359 66.667 0.00 0.00 0.00 3.61
4006 6155 2.738521 CGCGACACCCTCACCTTG 60.739 66.667 0.00 0.00 0.00 3.61
4007 6156 4.003788 CCGCGACACCCTCACCTT 62.004 66.667 8.23 0.00 0.00 3.50
4008 6157 4.988716 TCCGCGACACCCTCACCT 62.989 66.667 8.23 0.00 0.00 4.00
4009 6158 4.736896 GTCCGCGACACCCTCACC 62.737 72.222 8.23 0.00 32.09 4.02
4010 6159 2.267681 CTAGTCCGCGACACCCTCAC 62.268 65.000 8.23 0.00 34.60 3.51
4011 6160 2.034532 TAGTCCGCGACACCCTCA 59.965 61.111 8.23 0.00 34.60 3.86
4012 6161 2.772691 CCTAGTCCGCGACACCCTC 61.773 68.421 8.23 0.00 34.60 4.30
4013 6162 2.754658 CCTAGTCCGCGACACCCT 60.755 66.667 8.23 0.00 34.60 4.34
4014 6163 3.834799 CCCTAGTCCGCGACACCC 61.835 72.222 8.23 0.00 34.60 4.61
4015 6164 3.834799 CCCCTAGTCCGCGACACC 61.835 72.222 8.23 0.00 34.60 4.16
4016 6165 3.834799 CCCCCTAGTCCGCGACAC 61.835 72.222 8.23 3.36 34.60 3.67
4030 6179 1.895798 GGCGTATAGGTTAGTACCCCC 59.104 57.143 0.00 0.00 46.28 5.40
4031 6180 1.895798 GGGCGTATAGGTTAGTACCCC 59.104 57.143 0.00 0.00 46.28 4.95
4032 6181 2.560105 CAGGGCGTATAGGTTAGTACCC 59.440 54.545 0.00 0.00 46.28 3.69
4033 6182 3.225940 ACAGGGCGTATAGGTTAGTACC 58.774 50.000 0.00 0.00 45.39 3.34
4034 6183 4.339247 TCAACAGGGCGTATAGGTTAGTAC 59.661 45.833 0.00 0.00 0.00 2.73
4035 6184 4.339247 GTCAACAGGGCGTATAGGTTAGTA 59.661 45.833 0.00 0.00 0.00 1.82
4036 6185 3.131755 GTCAACAGGGCGTATAGGTTAGT 59.868 47.826 0.00 0.00 0.00 2.24
4037 6186 3.383825 AGTCAACAGGGCGTATAGGTTAG 59.616 47.826 0.00 0.00 0.00 2.34
4038 6187 3.368248 AGTCAACAGGGCGTATAGGTTA 58.632 45.455 0.00 0.00 0.00 2.85
4039 6188 2.185387 AGTCAACAGGGCGTATAGGTT 58.815 47.619 0.00 0.00 0.00 3.50
4040 6189 1.861982 AGTCAACAGGGCGTATAGGT 58.138 50.000 0.00 0.00 0.00 3.08
4041 6190 3.306088 CCATAGTCAACAGGGCGTATAGG 60.306 52.174 0.00 0.00 0.00 2.57
4042 6191 3.306088 CCCATAGTCAACAGGGCGTATAG 60.306 52.174 0.00 0.00 33.91 1.31
4043 6192 2.631062 CCCATAGTCAACAGGGCGTATA 59.369 50.000 0.00 0.00 33.91 1.47
4044 6193 1.416401 CCCATAGTCAACAGGGCGTAT 59.584 52.381 0.00 0.00 33.91 3.06
4045 6194 0.828022 CCCATAGTCAACAGGGCGTA 59.172 55.000 0.00 0.00 33.91 4.42
4046 6195 1.602237 CCCATAGTCAACAGGGCGT 59.398 57.895 0.00 0.00 33.91 5.68
4047 6196 4.540153 CCCATAGTCAACAGGGCG 57.460 61.111 0.00 0.00 33.91 6.13
4049 6198 0.331278 TTGGCCCATAGTCAACAGGG 59.669 55.000 0.00 0.00 44.37 4.45
4050 6199 2.214376 TTTGGCCCATAGTCAACAGG 57.786 50.000 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.